>input_sequence_40209
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-----------------------------------------------CCACTCTCATGGTGTGTAGCTCAGGGTTGCTTC
TTCCGGCTAGCTAGCTCCCCGGCCGTGGTTAAGACTTGGGTTCCAAGCTAGCTAGCCGCAGGCCAGTTAATAGGCTGCTT
GTCCGGCTGCCGGGAGGATAGGTTGTTGGTCAGGTGGGCTGCGTAGACGGACGGA----GAGAGCAGGAGGGATGGGGCT
GAGGGAGATAGAGTCTACATTGCCGCCGGGGTTCAGGTTCTACCCCAGCGACCAGGAGCTCGTCTGCCACTACCTCTACA
AGAAGGTGACCAACGAGCGCGCCTCGCAGGGCACGCTCGTCGAGGTCGACCTCCACGCGCGCGAGCCATGGGAGCTTCCT
GGTGAGTCCACTACCTCCTTCCTCGCTAGGTTCATCTC------------------------------------TCTGGT
TTCGGTCGATTCCTCTTGCC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGTCCCGTT-CCCGCCTGCTGTTCTTCCGGCTG
TGTTCATTAGATCGATGCATGCTAGCTGCTGTGCAAGGAAAGGAGTTCTTACTATA---GTTGCTAGCCTAAGAGTATCG
AGCCATCC---AA-GTGATTATGAGCATGACCTTCGTTCCGGAG----TATGGCTGAGATTAGCATGGCCTTTGTT----
GAAG---ATATGCAAC----AATTATATC----TCGGTCATAATAATGAAGAAGCAAAAAAGGATTTACTGACCAATCAT
CCTTGTGAGTATTTTTGTCCCGTTTAGTAGCTTAACCCGCTAGCCAAGGTCCCATATATGCTCA----TTAATCAATGAG
CATGGAATAATCCACGATAATCACTTG-CCAATAATGCATTAACTGATCAGAACGCGCAGTGCTGTCCTCGTGAACGTCT
CGATGACGACGTCCTCCGGTCCTGTCCACTTCCTCGCAACGTCACATGCGTAATAGTCACATTTCGGATTTCCGTTTCTT
CGGTTTCCTCATTCATCATAGGAAAAGAGCAGTGTTTCGCTTTCCGGTAATCAATTTTACGCTTTTAGTACGTATGCTCC
CATCATTTTGCAAGTTGCAGCT-------ACGGTTTGTGAGGCCCGGTATATATCGGG----TTTTCACTGACACTGTTA
ATTAATTGATTGTGCTTTGGGCGCTCACAGACGTGGCGAAGCTCACGGCCAGCGAGTGGTACTTCTTCAGCTTCAGGGAC
CGCAAGTACGCCACGGGGTCGCGCACCAACCGCGCCACCAAGACCGGCTACTGGAAGGCCACCGGGAAGGACCGCGAGGT
GCGCAGCCCGGCCACGCGCGCCGTCGTCGGCATGAGGAAGACGCTGGTCTTCTACCAGGGCCGCGCCCCCAACGGCAGCA
AAACCAGCTGGGTCATGCACGAGTTCCGCCTCGACTCGCCGCACCTGCCACCAAGGGTACGTATCACTTGTC--------
----------GT-----ACTCTTCAGGTTTACCTC-CTCTTCGCAATTGCATCGGCCGGCGTTTCTA----ACCTGGATG
CAATTCTGCAGGAGGACTGGGTGCTCTGCAGGGTGTTCCAGAAGCAGAAACTGGACGGCGAGCAAGACAACGCCCGCTCC
TCCTCGCCGACCTTCGCCCGCTCGTCGCAGGTGGCGCAGGAGCTGCCCGTGATGGACGCGAGCGGCGACCAGATGATGGG
CTCGGGCGCCGCCGGCTTCGTGGCGCCACGGCAGGAGGAGTTGATCTGTGGCCCCAACCCGTTGATGAACGCGGCGATGT
GGCAGCAATACAACTCGCTGCTTCTTGACCAGTACCCGCAGGAAGAGATGGCGGGCAGCTCGCCGATGAT---------G
GCCACAGGAGGAGCGGGAGATGAGTGCGGATTCTTCTTCGACTCGGGGTTCGAGGACACGGCTACCCTTGGAACCATGAG
GTTCCCCCAAGCGTGGAGCTGATGCCGGCCGGTCGTGCGC--GCGTGCCCAGTGATCGTTGTGTATACGTTGTGAAGGAA
AAACTAGCGATTGAATTATTTAATTCCATTGGTACTGTAGGTATAGTT--TGTGAGGTCGTTTAA---ATAGATTTGTAA
AGGATCG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr2B_1_TraesCS2B01G399700
CCTCCAGGCAGCGGCCACGTGGACGGCCTTTAGTCCCGGTTCGTGTAAGAACCGGGACTAAAGGGGTGAGGCTTTAGTAA
CGACCCTCTAGTCCCGGTTCCCTTATGAACCGGGACAATAGGCCCTTTTTCTACTATAGTGTGAGGTGGGTTTGTGAGGG
ACGGGAGTCGTTGCGGTCTTTTCTTTGCTCGACGAAACGTTTTCTTTCACTTCTCGGTAGCAGCTCGCCGGCCGTAAATA
ACTTGAACTCCAACTTTTTCGATTTCTGGGATCCATGAAACACCAACTCCCAGTCTTTGTACCATGACTCGTCTCAGATC
CCGGAGCTAGCCTCCTGAAGCCAGGTCGTTCGGGACAGCTCCGCTTGTGGATTCGAAAGAAGCTGGAAGCTGGGCAGTTG
CCTAACAGGCCCTATACTCTTATCCTGTGGGGACCAGCAATATTTTTAGATTGAATTTCCAGGATCAGCACCGTAACCTG
AGTGCACACTTCCT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCTGATTTAATAATCTTTTGAACTGTA---CAAAAGAAAAGACGTTGAGAATGAACAGCGCGAGCTTAATGTATTGG
TGGCGTGCCACGTGGGAGGACTCCATGTCATGACTTGCGGGGGGTGGAAATGGGCTAGCTTGCGAGGCTGGGGCTCCTGG
GTGGATCGTCAGCGGCGCGGTTCTTGTGGCACAAGCATGCATGGCAGCATGTCGATCCGTCGCGTTGGAATCTTCCACAT
AAGCAGGCTAGCTAGCTAAGCTAAGCTAAGG-----TAAGCAGCACGCCGGCCCACACGGGGCGA--------GGGCCGG
GATACCGGGACAGCGACCGAGCCGGCGGCCGC-TGCGGAGCTTGCTGCTGTCAAGTGTAGTTAAGCGGAAAGAGCTGGCT
AGGGCACAGCTTTCCGGCCTCCCCCACCTCCACTGTTCCCTGACACGATATGGATATATCGAGTTGTCTCTCTTCCATCG
GCTCCATCCCCGCTATATAAAGAGCCGG-TCGATCCAAGCCATCCGGCCACTCTCATGGTGTGTAGCTCAGGGTTGCTTC
TTCCGGCTAGCTAGCTCCCCGGCCGTGGTTAAGACTTGGGTTCCAAGCTAGCTAGCCGCAGGCCAGTTAATAGGCTGCTT
GTCCGGCTGCCGGGAGGATAGGTTGTTGGTCAGGTGGGCTGCGTAGACGGACGGA----GAGAGCAGGAGGGATGGGGCT
GAGGGAGATAGAGTCTACATTGCCGCCGGGGTTCAGGTTCTACCCCAGCGACCAGGAGCTCGTCTGCCACTACCTCTACA
AGAAGGTGACCAACGAGCGCGCCTCGCAGGGCACGCTCGTCGAGGTCGACCTCCACGCGCGCGAGCCATGGGAGCTTCCT
GGTGAGTCCACTACCTCCTTCCTCGCTAGGTTCATCTC------------------------------------TCTGGT
TTCGGTCGATTCCTCTTGCC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGTCCCGTT-CCCGCCTGCTGTTCTTCCGGCTG
TGTTCATTAGATCGATGCATGCTAGCTGCTGTGCAAGGAAAGGAGTTCTTACTATA---GTTGCTAGCCTAAGAGTATCG
AGCCATCC---AA-GTGATTATGAGCATGACCTTCGTTCCGGAG----TATGGCTGAGATTAGCATGGCCTTTGTT----
GAAG---ATATGCAAC----AATTATATC----TCGGTCATAATAATGAAGAAGCAAAAAAGGATTTACTGACCAATCAT
CCTTGTGAGTATTTTTGTCCCGTTTAGTAGCTTAACCCGCTAGCCAAGGTCCCATATATGCTCA----TTAATCAATGAG
CATGGAATAATCCACGATAATCACTTG-CCAATAATGCATTAACTGATCAGAACGCGCAGTGCTGTCCTCGTGAACGTCT
CGATGACGACGTCCTCCGGTCCTGTCCACTTCCTCGCAACGTCACATGCGTAATAGTCACATTTCGGATTTCCGTTTCTT
CGGTTTCCTCATTCATCATAGGAAAAGAGCAGTGTTTCGCTTTCCGGTAATCAATTTTACGCTTTTAGTACGTATGCTCC
CATCATTTTGCAAGTTGCAGCT-------ACGGTTTGTGAGGCCCGGTATATATCGGG----TTTTCACTGACACTGTTA
ATTAATTGATTGTGCTTTGGGCGCTCACAGACGTGGCGAAGCTCACGGCCAGCGAGTGGTACTTCTTCAGCTTCAGGGAC
CGCAAGTACGCCACGGGGTCGCGCACCAACCGCGCCACCAAGACCGGCTACTGGAAGGCCACCGGGAAGGACCGCGAGGT
GCGCAGCCCGGCCACGCGCGCCGTCGTCGGCATGAGGAAGACGCTGGTCTTCTACCAGGGCCGCGCCCCCAACGGCAGCA
AAACCAGCTGGGTCATGCACGAGTTCCGCCTCGACTCGCCGCACCTGCCACCAAGGGTACGTATCACTTGTC--------
----------GT-----ACTCTTCAGGTTTACCTC-CTCTTCGCAATTGCATCGGCCGGCGTTTCTA----ACCTGGATG
CAATTCTGCAGGAGGACTGGGTGCTCTGCAGGGTGTTCCAGAAGCAGAAACTGGACGGCGAGCAAGACAACGCCCGCTCC
TCCTCGCCGACCTTCGCCCGCTCGTCGCAGGTGGCGCAGGAGCTGCCCGTGATGGACGCGAGCGGCGACCAGATGATGGG
CTCGGGCGCCGCCGGCTTCGTGGCGCCACGGCAGGAGGAGTTGATCTGTGGCCCCAACCCGTTGATGAACGCGGCGATGT
GGCAGCAATACAACTCGCTGCTTCTTGACCAGTACCCGCAGGAAGAGATGGCGGGCAGCTCGCCGATGAT---------G
GCCACAGGAGGAGCGGGAGATGAGTGCGGATTCTTCTTCGACTCGGGGTTCGAGGACACGGCTACCCTTGGAACCATGAG
GTTCCCCCAAGCGTGGAGCTGATGCCGGCCGGTCGTGCGC--GCGTGCCCAGTGATCGTTGTGTATACGTTGTGAAGGAA
AAACTAGCGATTGAATTATTTAATTCCATTGGTACTGTAGGTATAGTT--TGTGAGGTCGTTTAA---ATAGATTTGTAA
AGGATCGAGTGTGTACGTGCTTGCATGAGATGGTTTCGTTTGATCGTTTCCGCCCTTTGAATGATGCCATGTATTGCAAT
CAGAAAACTCATA--------TGTAAATTAGTACAGCACAG---TTCAGATTTCAGTACACACTACACAGGAAACATCAT
TGCGTTGTTCCTAGAGAAGATACTCCCTCCGTCCGGAAATACTTGTCATCAAAATGTACAAAAAGGATGTATCTAGAACT
AAAATACATCTAGATACGTCCCCTTTTATTTATTTTGATGACAAGTATTTTCGGACGGAGGGAGTACAATACTAGTGTTC
TTTTCTTTTTCTTTTTGGAACTGGAGACACTCTTCCGCTGTAAAACTGTGTTCCTGTTGAAAAACCTCCATGCATGCTCC
TAGTAAATGCACTGGGTGTGTGAGATTATCTGATCTACTTCTCCTTTATTTCAAGTTGCCTGA---GATGATGCACGTGC
AAGCATTCCGTAAG----TAGTAGTACGAATCGTGCATGATATGCATGTTTATTTCAAGCATTCCGTGTGCTTTGTCTTT
TCTAAACAAGAAAAGG---AAGGGTGTGGAAGAACTTGGTTTGCTGGTACATTTATATGCATGAGGGT------------
--------------------------------------------------------------------------------
------------GAGGGCGGGGCGGTCGAGGGAGCGCCACGGGTGGCAGGAGCAGGTGCTCCAGCTGGCGTTGGAGGGGG
GCTCGCGC-GGGGGAGATCGTGCACTGCTGGATTCGGTCGTGG-----AAACGAAACGGCTAGAGGTAGAAGAAGATCAT
CCAACCGTCCATTCTTCATCCAACGGTCCAGATTTTTGACTGATACTTAGTTTCTTTTCATGTAAC--------------
---------------------------TATCTTCTCCAAGAAAAGGAAAA-AAGAAGAATGGAAGAACTTTTTTTTTTTG
CGGGAAGAAGAATGGAAGAACTTACTGGTACATATGCATGTTCTGTTCTGCACCACGTCCATTTCGAAGCTCGCGCATTT
CGGAAGTTAGCCAAGGTTGATCCGCGTCATCTGAGCGCAATGGCCAATAGGGGTGTGTTG
>chr2D_412
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CTATGCTCTTATCCTGTGGGGACTAGCAGTATTTTTAGACTGAATTTCCAGGATCAGCACCGTAACCTG
GGTGCACACTTACTCCCTTCATTACCTTATACAAAGCCATAAACTCAAATTACAAGTACCAAGGTAAATTTTAATAACTG
CTTTGCAAGTCAATTTTTCTTTTCATTAACCGAAATCATTAATACACCCGCATGCATGCAAGGAGGGAATGGGAAGGAAG
TAGCATAGTGTCATTCTAACTACGTACATGCATGCAAGTGCTAAATAAGTTGATAATACGAGAAAACATCATTAATTTTT
GCCTCGATTACTGTTAGTGGACTTGTATAGATGCAAAATGTATTTTTCATAGTGACCTTGTATAAGGGAATGGAGAGAGT
ACGTCTGATTTAATAGTCGTTAGAACTGTACTGCAAAAGAAAAGACGTTGAGAATGAACAGGGCGAGCTTAATTTATTGA
TCGCGTGCCACGTAGGAGCGCTCCATGTCATAACTTGCGGGGGGTGGAAATGGGTTAGCTTGCGAGGCCGGGGCTCCTGG
GTGGATCGTCAGCGGCGCGGTTCTTGTGCCACAAGCATGCATGGCAGCATGTCGATCCGCAGCGATGGAATCTTCCACAT
AAGCAGGCTAGCTAGCTAAGCTAAGCTAGGCTAGGCTAAGCAGCACGCCGGCCCACACGGGGCGGGGGCGCGGGGGCCGG
GATACCGGGACAGCGACCGAGCCGGCGGCCGC-T-----GCTTGCTGCTGTCAAGTGTAGTTAAGCGGAAAGAGCTGGCT
AGGGCACCGCTTTCTGGCCTTCCCCACCTCTACTGTTCCCTGACACGATATGGATATATCGAGTTGTCTCTCTTCCATCG
GCTCCATCTCCGCTATATAAAGGGCCCGCTCGATCCAAGCCATCCGGCCACTCTCATGGTGTGTAGCTCAGGGTTGCTTC
TTCCAGCTAGCTAGCTCCCCGGCCGTGGTTAAGACTTGGGTTTCAAGCTAGCTAGCTGCAGGCCAGTA------------
---------------------GTTGTTGGTCAGGTGGGCAGGGTAGACGGACGGGCAGACCGGGAGGGAC-GATGGGGCT
GAGGGAGATAGAGTCGACATTGCCGCCGGGGTTCAGGTTCTACCCCAGCGACCAGGAGCTCGTCTGCCACTACCTCTACA
AGAAGGTGACCAACGAGCGCGCCTCGCAGGGCACGCTCGTCGAGGTCGACCTCCACGCGCGCGAGCCATGGGAGCTTCCT
GGTGAGTCCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCCCGTT-CCCGCCTGCTGTTTTTCCGGCTG
TGTTCATTAGATCGATGCATGCTAGCTGCTGTGCTAGGAAAAGAGTTCTTAC--TAGTTGTTGCTAGCCTAAGAGTATCG
CGCCATCC---ATGGTGATTACGAGCATGATCTTC----CGGAGTATATATGGCTGAAATCAGCATGGCCTTTGTTTGTT
GAAGATCATATGCAACAATTAATTCTACC----TCGGTCATAATAATGAACAAGCAAAAA-GGACTTCCTGATCAATCAG
CCTTGTGAGTATTTTTGTCCCGTTTAGTAGCTTAACCCGCTAGCCAATGTCCCATATATGCTCACTAATTAATCATTGAG
TATGGAATAATCCACAATAATCACTTTCCCAATAATGCATTAACTGATCAGAAGGCGCAGTGCTGTCCTCGTGAACGTCT
CGATGACGACGTCCCCCGGTCCTGTCCATTTCCTCGCAACGTCACATGCGTAATAGTTACATTTCGGATTTCCGTTTCTC
CGGTTTCCTCATACATCATAGAAAAAGAGCAGAGTTTCGCTTTCCCGTAATCAATTTGAACA-TTTAGTACGTGTGCTCC
CATCATTTTGCAAGTTGCAGCTTTGTACTACGAGTTATAGACGA-------------G----TTTTCACTGACACTGTTA
ATTA--------TGCTTTGGGCGAGCGAAGACGTGGCGAAGCTCACGGCCAGCGAGTGGTACTTCTTCAGCTTCAGGGAC
CGCAAGTATGCGACGGGGTCGCGCACCAACCGCGCCACCAAGACCGGCTACTGGAAGGCCACCGGGAAGGACCGCGAGGT
GCGCAGCCCGGCCACGCGCGCCGTCGTCGGCATGAGGAAGACGCTGGTCTTCTACCAGGGCCGCGCCCCCAACGGCAGCA
AGACCAGCTGGGTCATGCACGAGTTCCGCCTCGACTCACCGCACCTGCCACCAAGGGTACGTACGCACCAACTACTCCTA
TATGTCACTTGTATTCCACTCTTCGGGTTAGCTCCTCTCTTTGCAATTGCATGGGTCGGCGTTGCTA----ATCTGGACG
CAATTCTGCAGGAGGACTGGGTGCTCTGCAGGGTGTTCCAGAAGCAGAAACTGGACGGCGAGCAAGACAACGCCCGCTCC
TCCTCGCCGCCCTTCGCCGGCTCGTCGCAGGCGGCGCAGGAGCTGCCCGTCATGGACGCGAGCAGCGACCAGATGATGGG
TTCGGGCTCTGCCGGCTTCGCGGCGTCACGGCAGGAGGAGATGATCTGTGGCCCCAACCCGTTGATGAACGCGGCGATGT
GGCAGCAATACAACTCGCTGCTTCTTGGCCAGTACCCGCAGGAAGAGATGGCGGGCAGCTCGCCGATGAT---------G
GCCACAGGAGGAGCGGGAGATGAGTGCGGATTCTTCTTCGACTCGGGGTTCGAGGACACGGCTTCCCTTGGGGCCATGCG
GTTCCCCCAAGCGTGGAGCTGATGCCGGCCGGTCGTGCGC--GCGCGCCCAGTGATCGTTGTGTATACGTTGTGAAGGAA
AAACTAGCGATTGAATTATTTAATTCCATTGGTACTGTAGGTATAGT--GTGTGAGGTCGTTTAT---ATAGATTTGTGA
AGGATCGAGTGTGTACGTGCTTGCATGAGATGGTTTCGTTTGACCGTTTCGGCCCTTTGAATGATGCCATGTATTGCAAT
CATAAAACTCATATGTAAAATTGTAAATTAGTACAACACAG---TTCAGATTTCAGTACACAC--CACAGGAAACACCAT
TGCGTTGTTCCTAGAGAAGATAG---------------------------------------------------------
-------------------------------------------------------------------AATACTAGTGTTC
TTTTCTTTTTCTTTTTGGAACTGGAGACACTCTTCCGCTGGAACTAGAGAAGATAG------------------------
--------------------------------------------------------------------------------
----ATTCCATAAG----TAGTAGTAC-AATCGTGCATGATATGCAGTCCAGATTGCATATATA---GTGCTTTGTCTTT
TCCAAACAAGAAAAAG---AAGAA--TGGAAGAACTTGGTTTGCTGGTACATATATATGCATGCTCTATTCTGAGCCAGA
GAGTTCAAGGTTCAGCTGTGTGTGTGTGTGCATGAGGTGTGGTGGGGTAGAAAGATGGCAGGGGCGGCGGCAGTACTATG
GTAAGGCCATAGGAGGGCGGGCCGGTCGATGGAGCGCCACGGGTGGCGGGAGCAGGTGGCCCAGCCGGCGTTGGAGGGGG
GCTCGTGC-GGGGGAGATCGTGCACTGCTGGATTCGGCCGTGA-----AAA-----TGGCTAGAGGTAGTAGAAGATCAT
CCAACCGTTCATTCTTCATCCAGCGGTTCGGATTTTCGACTGACACTTAGTTTCCTTTCATGTACCTGAGGGATAG----
-------GCGGACCTATATATATGGTTTATCTTCTCCAAGAAAAGAAAAAGAAGAAGAATGGAAGAACTTGTTTT-----
-----------------------ACGGGTACATATGCATGTTCTATTCTGCACCACGTCCATTTCAAAGCTCGCGCATTT
CGGAAGTTAGCCAAGCTTGATCCGCGTCATCTGGGCGCAGTGGCCAATAGGGGGGTGTTG
>chr2A_412
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CTATGCTCTTATTCTGCGGGGACTAGCAGTATTTTTAGACTGAATTTCCGGGATTAACACCGC------
-GTGCACACTTGCT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCTGGTTTAATAATCTTTTGGACTGTAG---AAAAGAGAAGACGTTGAGAATGAACATGGCGGGCTTAATTTGTTGA
TCGCGTGCCACGTGGGAGCGCTCCGTGTCATGGCTTGCGGGGGGTGGAAATGGGTTAGCTTGCGAGGCCGGGGCTCCTGG
GCGGATCGTCAGCGGCGCGGTTCTTGTGGCACAAGCATGCATGGCAGCATGTCGATCCGCAGCGTTGGAATCTTCCACAT
AAGCAGGCTAGGTAGCCAAGCTAAGCTAAGCAGCG-------------CGGCCTACACGGGGCCGG------------GG
GATACCGGGACAGCGACGGAGCCCGCGGCGGCCTGCGGAGCTTGCTGCTGTCAAGTGTAGTTAAGCGGAAAGAGCTGGCT
AGGGCACCGCTTTCCGGCCTCCCCCACCTCCACTGTTCCCTGACATGATATGGATATATCGAGTTGTCTCTCTTCCATCG
GCTCCATCCCCGCTATATAAAGAGCCGG-TCGATCCAA--------GCCACTCTCATGGTACATAGCTCTTGCTTCTTCC
AGT--------TAGCTCCCCGGCCGTGGTTAAGACTTGGGTTCCAAGCTAGCTAGCTGCAGGCCAGCTAATAATTATTAA
GC------------------------TGGTCAGGTGGGCTGCGTAGACGGACGGACGGAGAGAGCGGGAGGGATGGGGCT
GAGGGAGATAGAGTCCACATTGCCGCCGGGGTTCAGGTTCTACCCCAGCGACCAGGAGCTCGTCTGCCACTACCTCTGCA
AGAAGGTGACCAACGAGCGCGCCTCGCAGGGCACGCTCGTCGAGGTCGACCTCCACGCGCGCGAGCCATGGGAGCTTCCT
GGTGAGTCCAACACCTCCTTCCTCGCTAGTTCATCTCCCTCTCCCCCTCTCTCTCTCTCTCTCTGGCCATGGAGTCTGGT
TTCGATCGATTCCTCTTCCC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGTCCGGTTCCCCGCCTCCTGTTTTTCCGTCTG
TGTTCATTAGATCGATGCATGCTCGCTGCTATGCCAGGAAAATAGTTCTTAC--TA---GTTGCTAGCCTAAGAGTATCG
AGCCTTCCGCCAA-GTGATTACGAGCATGATCTTC----CGGGG----CATGGCTGAAACCAGCATGGCCTTTGTTTGTT
GAAT---ATATGCAACAATTAATTATATCTCGATCGGTCATAATAATGAACAAGCAAAAA-GGACTTCCTGATCAATCAG
CCTTGCGAGTATTTTTGTCCCGTTTAGTAGCTTAACCCGCTAGCCAATGTCCCATATATGCTCA----TTAATCAATGAG
TATGGAATAATCCACGATAATCACG-TCCCAATAATGCATTAACTGATCAGAAGGCGCAGTGCTGTCCTCGTGAACGTCT
CGATGACGACGTCCTCCGGCCCTGTCCATCTCCTCGCAACGTCACATGCGTAATAGTCACATTTCGGATTTCCGTTTCTT
CGGTTTCCTCATTCATCATAGAAAAAGAGCAGTGTTTCGCTTTCCGGTAATCAATTT-ACGCTTTTAGTACGTATGCGCC
CATCATTTTGCAAGTTGTAGCTTTGTGCTACGATTTGTGAGGCCCGGTATATACGTATGAGTTTTTCACTGACACTGTGA
ATTAATTGGTTGTGGTTTGGGCGCGCGCAGACGTGGCGAAGCTCACGGCCAGCGAGTGGTACTTCTTCAGCTTCAGGGAC
CGCAAGTACGCCACGGGGTCGCGCACCAACCGCGCCACCAAGACCGGCTACTGGAAGGCCACCGGCAAGGACCGGGAGGT
GCGCAGCCCGGCCACGCGCGCCGTCGTCGGCATGAGGAAGACGCTCGTCTTCTACCAGGGCCGCGCCCCCAACGGCAGCA
AGACCAGCTGGGTCATGCACGAGTTCCGCCTCGACTCGCCGCACCTGCCACCAAGGGTACGTACCAAT----------TA
TATGTCACATGT-----ACTCTTGCGGTTAGCTCCTCT-------------TCGCTCGGCGTTTCTAATTGATCTGGATG
CAATTCTGCAGGAGGACTGGGTGCTCTGCAGGGTGTTCCAGAAGCAGAAAGTGGACGGCGAGCAAGACAACGCCCGCTCC
TCTTCGCCGACCTTCGCCGGCTCGTCACAGGCGGCGCAGGAGCTGCCCGTCATGGACGCGAGCAGCGACCAGATGATGGG
CTCGGGCTCCGCTGGCTTCGCCCCGCCACGGCAGGAGGAGATATTCTGTGGCCCGAGCCCGCTGATGAACGCGGCGATGT
GGCAGCAATACAACTCGCTTCTTCTTGACCAGTACCCGCAGGAGGAGACGGCGAGCGTCTCGCCGACGATGGGGATAGGG
GCCAGAGGAGGAGCAGGAGACGAGTGCGGATTCTTCTTCAATTCGGGGTTCGAGGACATGGCTACCCTTGGGGCCATGAG
GTTCCCCCAAGGGTGGAGCTGATGCCGGCCGGTCGTGCGCGTGCGCGCCTAGTGATCGTTGTGTATACGTTGTGAAGGAA
AATCTAGCGATTGAATTAATTAATTCCATTGGTATTGTAGGTACGTATAGTGTGAGGTCGTTTATAATATAGATTGGTAA
AAGATCGAGTGTGTATGTACCTGCATGAGACGGTTTCGTTTCAGTCCCTTGAATGATGCCAT--TGCCATGTATTGCAAT
CATAAAACTCATATGTAAA--------TTAGTACAGCACAATAATTCAGATTTCAG-------TACACAGGAAACATCAT
TGCGTTGTTCCTATGGAAGATACGTAGATAGTACTTTGT-----------------------------------------
--------------------------------------------------------------------------GTTTTT
TCTCTCTTCTCCTTTTCTAACTGGAGATACTACGTGCTCTTCTGCAGGAGAACATGTTCCTAG-----------------
------------TGGGTGTGTG-GATTATCTGATCTGTTTCTCCTTTATTTCAAGTTTCCTGAGATGAATATGCGTGTGG
AAGCATTCCATAAGTACTTAGCAGTAC-GATCGTGCATGATATGCAGTCAAGATTGCAAATATA---CTGCTTGGTCTTT
TCCAAACAAGCAAAAAAGAAAGAA--TGGAAGAACTTGGTTTGCTGGTACATATGCATGTTCTACGGTGCCAGAGAAGAA
------------------------------CATGAGGTGTGGTGGGGTAGAAAGATGGCAGGGGCGGCGGCAGTACGACG
GTAAGGCCATAGGA--------------------------GGGTGGCGGGAGCAGGTGGTCCAGCCGGCGTTGGAGGAAG
GCCCGCGCGGGGGGAGATCGTGCACTGCTGGATTTGGTCGTGGAAAGGAAA-----CGGCTAGAGGTAGAAGAAGACCAT
CCAACCGTCCATTGTTCATCCAACCGTTCAGATTTTCGACTGGCACTTGGTTTCTTTTCATGCACCTGAGGGATAGATAG
GCCGTAGGCGGGCCTCTACATATGGCTTATCTTCTCGAAGTAAAGGAAAA-AAGAAGA----------------------
-----------ATGGAAGAACTTACTGGTACGTATGCATGTTCTGTTCTGCGTCACGTCCACTTCAAAGCTCGCGCATTT
CGGAAGTTAGCCAAGGTTGATCCGCGCCATGTGAGCGCAATGGCCA--------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----S------------------S----S----------S-----------------------------
S----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-----------S-----S
-S----------------SS----------------------------------S-------------S-----------
-----------------------------------------------------------SS-------------------
------------------------------S---------------------------------S---------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------S---------------SSSSSSSS
-SSSSSSSSSSSSSSSSSSSS--------------------------------------------S--------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
----------SS-----------------S-SSSSSS-------------------------------------------
----S------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
----------------------------------S------S----------SS--------------------------
---------------------S--------S----SSSS------------------S--S-------------------
--------------------------------------------------S---------S---S--S----S------S
-----------------------------------------------S--------------------------------
S-------------------------S--------------------------S--------------------------
----------------------------S---------------------------------------------------
---------------------S-----------------------------------S----------------------
--------------------------------S--------------------SSSS-----------------------
--------S---------------S-S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-------------------------------------------------------------S--S-SSS---------
------------------------S----SS-SS-------S-------------S----------------S-------
--------------------------------------------------------------------------------
------------------S------------S------------------S------------S----------------
-------S------------S-------------------S---------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------SS-------
---------------------------------------------S----------------------------------
----------------------------------------------------------------S---------------
-------------------------------------------S------S-----------------------------
--S-----------------------------------------------------------------------------
-----------------------SSSSSSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-------------------------------------------SSSS-S-SS-S----SSS-SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS----------S-------------SS-------------------S----------SS----SS---S
---------S-----------------S------------------SSSSSSS--SS-SSSS-SSSS-------------
--S-----------S-------SSSS--------------------------S-----------S---------------
--------------------------------------------------------------------------------
---------------------S-------S-----------------S----------S------S--------------
---------------------------------------------------SSSSS------------------------
---------------------------S--------S------S--------------------S---------------
----------------------------------------------------------------------S----SSSSS
SSSSSSSSSSS------------------------------------------------------S--------------
-----------------------------------------------------S------
>forward_245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CGCCGGCCGTAAATA
ACTTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>reverse_1450
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CCGGGAGGATAGGTTGTTGG---------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>forward_1447
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TAATAGGCTGCTT
GTCCGGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_3071
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ACCTCCTCTTCGCAATTGCA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>forward_1691
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GAGCTTCCT
GGTGAGTCCAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_3864
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TCCCTCCGTCCGGAAATACT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
