CLUSTAL X (1.81) multiple sequence alignment input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 ACTTATCTTATTACTTGAGAATACTCGCTCCTTTCCAGATTTCTTGAGAA chr6D_1 ACTTATCTTATTACTTGAGAATCCTCGCTTCTTTCCAGATTTCTTTAGAA chr6A_1 ACTTATCTTATTACTTGGGAATCCTCGCTTCTTTCCAGACTTCTTGAGAA chr2A_1 ACATATCTTATTACTTGGGAATCCTCGCTTCTTTCCAGACTTCCTGAGAA chr3D_1 ACTTATCTTATTACTTGAGAATCCTCGCTTCTTTCCAGATTTCTTTAGAA chr5A_1 ACTTATCTTATTACTTGGGAATCCTCGCTTCTTTCCAGACTTCTCGAGAA chr5A_1 ACTTATCTTATTACTTGAGAATCCTCGCTTCTTTCCAAATTTATTGAGAA chr4D_1 ACTTATCTTATTACTTGAGAATCCTCGCTTCTTTCCAGATTTCTTTAGAA chr3A_1 ACTTATCTTATTACTTTGGAGTCCTCGCTTCTTTCCAGACTTCTTGAGAA chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TTTCCT-------------------------------------------- chr7A_965 CCCC-T-------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 CAACCAA------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 ACCTGCT------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ----------------------S------S-------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AAGT-GACCCCAGTGGTAATTCTGAAGTTGATGAGTGCGTTAGGATACTC chr6D_1 AAGT-CACCCCGGTGGTAATTCTGAAGTTGATGAGTGCCTTAGGATACTA chr6A_1 AAGT-CACCCCAGTGGTAATTCTGAAGTTGATGAGTGCCTCAGGATACTA chr2A_1 AAGT-CACCCCAGTGGTAATTCTGAAGTTGATGAGTGCCTCAGGATACTA chr3D_1 AAGT-CACCCCGGTGGTAATTCTGAAGTTGATGAGTGCCTTAGGATATT- chr5A_1 AAGTCCACCCCAGTGATAATTCTGAAGTTGATGAGTGCCTCAAGATACTA chr5A_1 AAAT-CACCCCAGTGGTAATTTTGAAGTTGATGAGTGCCTTAGGATACTA chr4D_1 AAGT-CACCCCGGTGGTAATTCTGAAGTTGATGAGTGCCTTAGGATACTA chr3A_1 AAGT-CACCCTAGTGGTAATTCTAAAGTTGATGAGTGCCTCAGGATACTA chr3B_63 -------------TGGTAACTCTGAAGTTTATGAATGCGCTAAGATACTA chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----S-------------------------------------------S forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AAAGCTGCAGCTAAAAGCTCGTGTTCAGATTCTATTGATGAACACAGTGG chr6D_1 AAAGCTGCAGCTGAAAGCTCGAGTTCAGATTCTATTGAT------AGTGG chr6A_1 AAAGCTGCAGCTGAAAGCTCGAGTTCAGATTCTACTGAT------AGTGG chr2A_1 AAAGCTGCAGCTGAAAGCTCGAGTTCAGATTCTACTGAT------AGTGG chr3D_1 AAAGCTGTAGCTGAAAGCTCGAGTTCAGATTATATTGAT------AGTGG chr5A_1 AAAGCTGCAGCTGAAAGCTCGAGTTCAGATTCTACTAAT------AGTGG chr5A_1 AAAGCTGCAGCTGAAAGCTCGAGTTCAGATTCTATTGAT------AGTGG chr4D_1 AAAGCTGCAGCTGAAAGCTCGAGTTCAGATTCTATTGAT------AGTGG chr3A_1 AAAGCTGCAGCTGAAAGCTCGAGTTCAGATTCTACTGAT------ACTGG chr3B_63 AAAGCTGCAGCTGAAAGCTCGAGTTCAAATTGTATTGATGAACATAATGG chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------------S--------S----------------------S----- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AGGAAGAACAAGAGGTACGTAATGAAGTTGCTGCTGAAAATAAATCAAGG chr6D_1 AGGAAGAACAAGAGGTACGTAATGAAGCTGTTGCTGAAAATAAATCAAGG chr6A_1 AGGAAGGACAGGAGGTACGTAATGAAGCTGCTGCTGAAAATAAATCAAGG chr2A_1 AGGAAGGACAGGAGGTACGTAATGAAGTTGCTGCTGAAAATAAATCAAGG chr3D_1 AGGAAGAACAAGAGGTACGTAATGAAGCTGTTGCTGAAAATAAATCAAGG chr5A_1 AAGAAGGACAGGAGGTACGTAATGAAGTTGCTGCTGAAAATAAATCAAGG chr5A_1 AGGAAGAACATGAGGTACGTAATGAAACTGCTGCTGAAAATAAATCAAGG chr4D_1 AGGAAGAACAAGAGGTACGTAATGAAGCTGTTGCTGAAAATAAATCAAGG chr3A_1 AGGAAGAACAGGAGGTACATAATGAAGTTCCTGCTGAAAATAAATCAAGG chr3B_63 AGGAATAACAAGAGGTACGT-ATGAAGCTACTGCTGAAAATAAATCAAGG chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AAC-CCCCAACTCGAAACGGAAGGCGGGTGCTGGGCCTCGCCGCCCTCTG chr6D_1 AAC-CCCGAACTCGAAAAGAAAGGCGGGTGCTCGGCCTCACCGCGCTCTG chr6A_1 AAC-CCTGAAATCGAAACGAAGGGCGGGTGCTCGGCCTCACAGCTCTCTG chr2A_1 AAC-CCTGAAATCGAAACGAAGGGTGGGTGCTCGGCCTCACCGCTCTCTG chr3D_1 AAC-CCCGAACTCGAAAAGAAAGGCGGGTGCTCGGCCTCACCGCGCTCTG chr5A_1 AAC-CCTGAAATCGAAACGAAGGGCGGGTGCTCGGCCTCACCGCTCTCTG chr5A_1 AAC-CCCGAACTTGAAACGGAAGGCGGGTGCTCGGCCTCACCGCGCTCTG chr4D_1 AAC-CCCGAACTCGAAAAGAAAAGCGGGTGCTCGGCCTCACCGCGCTCTG chr3A_1 AAC-CTTGAAATCGAAACGAAGGGCGGGTGCTCGGCCTCACCGCTCTCTG chr3B_63 AACACCCCAACTCGAAACAAAAGGCGGGTGCTCGGCCTCGCCGCGCTCTG chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs --------------------------------S-----------S----- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 CCATGGCGTGCAGGCAGCCGACTGACCGACGCCACCTTACACAACGCCTA chr6D_1 CCATGGCGTGCAGGCAGCCGACTGGCTGACGCCACCACACACAATGCCTA chr6A_1 CCATGGCGTGCAGGCAACCGACTGGCTGACGCCACCACACACAACGCCTA chr2A_1 CCATGGCGTGCAGGCAGCCGACTGGCTGACGCCACCACACACAACGCCTA chr3D_1 CCATGGCGTGCAGGCAGCCGACTGGCTGACGCCACCACACACAATGCCTA chr5A_1 CCATGGCGTGCAAGCAGCCGACTGGCTGACGCCACCACACACAACGCCTA chr5A_1 CCATGGCGTGCAGGCAGCCGACTGGCTGACGCCACCACACACAACGCCTA chr4D_1 CCATGGCGTGCAGGCAGCTGATTGGCTGACGCCACCACACACAATGCCTA chr3A_1 CCATGGCGTGCAGGCAGCCGACTTGCTGACACCACCACACACAATGCCTA chr3B_63 CCATGGCGTGCAGT-AGCCGACTGACCGACGCCACCACACACATCGCCTA chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------------------------------------SS------------ forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -CCGGTCCCAATTGAGCGCCCGGTACTCCAGCCACAGCACCGCCGCGCGT chr6D_1 -CCAGTCCCAGTTGAGCGCCCGGAACTCCAGCCACAGCACCGCCGCGCGT chr6A_1 -CCAGTCCCAATTGAGCGCCTGGAACTCTAGCCACAGCACCGCCGCGCGT chr2A_1 -CCAGTCCCAGTTGAGCGCCTGGAACTCTAGCCACAGCACCGCCGCGCGT chr3D_1 -CCAGTCCCAGTTGAGCGCCCGGAACTCCAGCCACAGCACCGCCGCGCGT chr5A_1 -CCAGTCCCAGTTGAGCGCCTGGAACTCTAGCCACAGCACCGCCGCGCGT chr5A_1 -CCAGTCCCAGTTGAGTGACCGGAACTCCAGCCACAGCGCCGCCGCGTGT chr4D_1 -CCAGTCCCAGTTGAGCGCCCGGAACTCCAGCCACAGCACCGCCGCGCGT chr3A_1 ACCAGTCCTAGTTGAGCGCCTGGAATTC---------------------- chr3B_63 -CCGGTCCTAGTTGAGCGCCTGGAACTC---------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----------------------S-------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 CCAGCCTTCAGCGGCCGTGCGTGTTCCCCGGCGACCGTATCCGAGATCGA chr6D_1 CCAGCCTTCAGGGGCCGCGCGTGTTCCCCGTCGACCGTATCCGAGATCGA chr6A_1 CCAGCCTTCAGCGGCCGTGCGTGTTCCCCGTCGACCGTATCTGAGATTGA chr2A_1 CCAGCCTTCAGCGGCCGCGCGTGTTCCCCGTCGACCGTATCTGAGATCGA chr3D_1 CTAGCCTTCAGGGGCCGCGCGTGTTCCCCGTCGACCGTATCCGAGATCGA chr5A_1 CCAGCCTTCAGCGGCCGCGCGTGTTCCCTGTCGACCATATCTGAGATCGA chr5A_1 CCAGGCTTCAGCGGCCGCGCGTGTTTCCCGTCGACCGTATCCGAGATCGA chr4D_1 CCAGCCTTCAGGGGCCGCGCGTGTTCCCCATCGACCGTATCCGAGATCGA chr3A_1 -CAGCCTTCAGCGGCCGCGCGTGTTCCCCGTCGACCGTATCTGAGATCGA chr3B_63 -CAGCCTTCAGCGGTCGCGCGTGTTCCTCGTCGACCGTATCAGAGATCGA chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------------------------------S------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AGGGACCGGTGGAAGGTGTGGTGGCTGAGAGTT---------GGGATCGT chr6D_1 AAGGACCGTTGGAAGATGTGGTGGCGACGGCTGCGGGAGTTGGGGATCTT chr6A_1 AGGGACCGTTGGAAGATGTGGTGGCGACGGCTGCGAGAGTTGGGGATCAT chr2A_1 AGGGGCCGTTGGAAGATGTGGTGGCGACGGCTGCGAGAGTTGGGGGTCAT chr3D_1 AAGGACCGTTGGAAGATGTGGTGGCGACGGCTGCGAGAGTTGGGGATCTT chr5A_1 AGGGACCGTTGGAAGATGTGGTGGCGACGGCTGCGAGAGTTGGGGATCAT chr5A_1 AGGGAGCATTGGAAGATGTGGTGGCGACGGCTGCGAGAGTTGGGGATCAT chr4D_1 AAGGACCGTTGGAAGATGTGGTGGCGACGGCTGCGGGAGTTGGGGATCTT chr3A_1 AGGGACCGTTGGAAGATGTTGTGGCGACGGCTGCAAGAGTTGGGGATCGT chr3B_63 AGGGGCCGGTGCAAGGTGTGGAGGCGATGGCTGCGAGAGTTGGGAATCGT chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------SSS-SS-S----------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 GGGAACGGGTGGTGGAGGGGCCGCCAGTAGGTTGTGAGATCGGTGGGAGC chr6D_1 GGGAACGGGTGGTGGAGGGGCCGCCGGTAGGTTGCGAAATCGGTGGGAGC chr6A_1 GGGAACGGGTGGTGGAGGGGCCGCCGGTAGGTTGCGAAATCAGTGGGAGC chr2A_1 GGGAACGGGTGGTGGAGGGGCCGCCGGTAGGTTGCGAAATCGGTGGGAGC chr3D_1 GGGAACGGGTGGTGGAGGGGACGCCGGTAGGTTGCGAAATCGGTGGGAGC chr5A_1 GGGAACGGGTGGTGGAGGGGCCGCCGGTAGGTTGCGAAATCGGTGGGAGC chr5A_1 GGGAACGGGTGGTGGTGGGGCTGCCGGTAGGTTGCGAAATCGGTGGGAGC chr4D_1 GGGAACGGGTGGTGGAGGGGCCGCCGGTAGGTTGCGAAATCGGTGGGAGC chr3A_1 GGGAACTGATGGTGTAGGGGCCGCTGGTAGGTTGCGAAATCGGTGGGAGC chr3B_63 GGGAACGGGTGGTCGAGGAGCCGCCGGTAGGTTGCGAGATTGGTGGGAGC chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------S--------S--------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AGCGATCTGGGCGGGCGAGGACGTGACCTAAACTCCATCGATCCCCTTTT chr6D_1 AGCGATCTGGGCGGGGGAGGACGTGACCTAAACTCCATCGATCCCCTTTT chr6A_1 AGCGATCTGGGCGGGGGAGGACGCGACCTAAACTCCATCGATCCCCTTTT chr2A_1 AGCGATCTGGGCGGGGGAGGACGCGACCTAAACTCCATCGATCCCCTTTT chr3D_1 AGCGATCTGGGCGGGGGAGGACGGGACCTAAACTCCATCGATCCCCTTTT chr5A_1 AGCGATCTGGGCGGGGGAGGACGCGACCTAAACTCCATCGATCCCCTTTT chr5A_1 AGTGATCTGGACGGGGGAGGATGTCACCTAAACTCCATCGATCCCCTTTT chr4D_1 AGCGATCTGGCCAGGGGAGGACGTGACCTAAACTCCATCGATCCCCTTTT chr3A_1 AGCGATCTGGGCGGTGGAGGACGCGACCTAAACTCCATCGATCCCCTTTT chr3B_63 AGCGATCTGGGCTGTGGAGGACGTGACCTAAACTCCATCGATCCCCTTTT chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ---------------S---------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -ACTTTGCTCCGAGGTGTACCAGTTGTAGACGAATTGTAAAAGACCTTCT chr6D_1 -ACTTTGCTCCGAGGTGTCCCAGTTGTAGAC------------------- chr6A_1 TACTTTGCTTGGGGGTGTCCCAGTTGTAGACGAATTGTATA-----TTTT chr2A_1 TACTTTGCTCGGGGGTGTCCCAGTTGTAGAC------------------- chr3D_1 -ACTTTGCTCCGAGGTGTCCCAGTTGTAGAC------------------- chr5A_1 TACTTTGCTCGGGGGTGTCCCAGCTGTAGAC------------------- chr5A_1 -ACTTTGCTCCGAGGTGTCCCATTTGTAAAC------------------- chr4D_1 -ACTTTGCTCCGAGGTGTCCCAGTTGTAGAT------------------- chr3A_1 TACTTTGCTGGGGGGTGTCGCAGTTGTAGAC------------------- chr3B_63 -ACTTTGCTTCGAGGTGTCCTAGTTGTTGAC------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------------------S--------------------S-SSSSS--S- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TTTTAGAATCTGACGAATTGTAA-----A--------------------- chr6D_1 ---------------------GAATTGTA--------------------- chr6A_1 TTTTAGGATCAAGTTGTAGAGGAATTGTA--------------------- chr2A_1 ---------------------GAATTGTATATTTTTTT--AGGATCAAGT chr3D_1 ---------------------GAATTGTA--------------------- chr5A_1 ---------------------GAATTGTATATTTTTTTTTAGGATCAAGT chr5A_1 ---------------------GAATTGTA--------------------- chr4D_1 -------------------------------------------------- chr3A_1 ---------------------GAATTGTATAATTT-TTTTAGGATCAAGT chr3B_63 ---------------------GAATTGTA--------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------S---SSSSSSSSSSSS---------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 ---------------AGACCTGTGTGCCCTGTGC---------------- chr6D_1 ---------------AGACATGTGTGCCGTGTGC---------------- chr6A_1 ---------------AGACCTGTGTGCCGTGTGC---------------- chr2A_1 TGTAGAGGAATTGTAAGACCTGTGTGTCGTGTGC---------------- chr3D_1 ---------------AGACATGTGTGCCGTGTGCCCAGGGCCGTCTCCAG chr5A_1 TGTAGAGGAATTGTAAGACCTGTGTGCCGTGTGC---------------- chr5A_1 ---------------A---------------------------------- chr4D_1 -------GAATTGTAAGACATGTGTGCCGTGTGC---------------- chr3A_1 TGTAGACGAATTGTAAGACCTGTGTGCCGTGTGC---------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ----------------------------S--------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 AAATTTGGGGGCCCGGGACGAAAATCAAAATAGGACCCTATTTTTTAAAA chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 CCATATAACCGAAGAACTAATGCAAGTAAAGCATACTCTCACTTAATTAT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 TTAACTTCAAATATATCTTATTTGTTACAATATTTAGGAAATATATCAAA chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 TACTAACAGTAAAATAGTAAAGATTGTACCAAGGGAATACACTTATAAAC chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 TGACCTCATTTTCTACCGAAAAGCGGCATTCTTCTAGTATTTCTTGATAT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 GAAATCTTCGATCAAATCTTCATAATTAATCTTCTCCAAGACATCAATTT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 CAAGTGCTATTGTTGCCAATCCATTCAGTCTTTATCGAGAGCGCCATTTT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 GTGTTCGAGCATCTTCTTCTAGTTTTTGTTTCTTCCTTGTTTTGAAGCAC chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 CAGAATCATACCTCCTTCCCGGATGCATGATTCTTTCTGTTTAATAAGAT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 AAACGTAATCTGAATCAACTCAAACTCTGGGAATTATAGCTATAAGAAAT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 AGAAAAGGACTTCAACCAGATGTCAGATTTTGAATTTTTCGTTTAACAAC chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 AAAGTAGCCTACTGCCTACTGCCTACACTAGCAAAATAAAGTAGGGTTTG chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 AACGCTTTGTCTACAAGAACCAGGGCCTGAGAAGAACTTATCATGCCAAG chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 GGAAGGGATGATGTGCGTTGGGGCATGGCCGGTCGATGGCCGCGTAGTCG chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 CGTACACGGCGTCGCCCTGCCTACTTGATGCCTCTGTGGCTCTGCCGCCG chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 TCGACCAGGCACTCAGCAGCCGTCGACCCCTGCTGCCCTTTCGACTGCGT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 GCGATCGAATCGGGACGGGAGTTACGGAAGCAAAACCGGCTGCAGGAGCT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 ACGTGCGTTCGTGCCTGGGATGGCTAGAATGGGCTGCCTGAGATTGCGTT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 TTTGGATGGGCCTTTTTTCCACATATTATGTATACATATTACTTGCTGGA chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 CTGGGGGGCCCCAAAATTTTGGGGCCCTGTGCGGTCGGCCAATTTGGCCT chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------GTGCGGAGAACGTGGCGTGGGCCGG chr6D_1 -------------------------GTGCGGAGAACGTGGCGTGGGCCGG chr6A_1 -------------------------GTGCGGAGAACCCGGCGTGGGTCGG chr2A_1 -------------------------GTGCGGAGAACCCAGCGTGGGCCGG chr3D_1 TCCTCATCAACGGGCCTGCGTGTGCGTGCGGAGAACGCGGCGTGGGCCGG chr5A_1 -------------------------GTGCGGAGAACCCGGCGTGGGCCGG chr5A_1 -------------------------------------------------- chr4D_1 -------------------------ATGCGGAGAACGCGGCGTGGGCCGG chr3A_1 -------------------------GTGCGGAGAACCCGGCGTGGGCCGG chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 CCCAAAGCAGCGATGTGCAGGACAGACGTAAAAATTATTTGACAAACCCA chr6D_1 CCCAAAGCAGCGATGTGC-------------------------------- chr6A_1 CCCAAAGCAGCGATGTGC-------------------------------- chr2A_1 CCCAAAGCAGCAATGTGC-------------------------------- chr3D_1 CCCAAAGCAGCGATGTGC-------------------------------- chr5A_1 CCCAAAGCAGCGATGTGCCGAACTACAGAAATTTTGACGACGGTCAAAAC chr5A_1 -------------------------------------------------- chr4D_1 CCCAAAGCAGCGATGTGC-------------------------------- chr3A_1 CCCAAAGTAGCGATGTGCCGAACTACAGAAATTTTGATGACCGACAAAAC chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------------------S-S--SSSS-S--SSS-S--SSSSS-S-SSSS forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 CGGAGGCAAAAAGGAACTCATTAGTACCACATCGGTTAATTCCAAAACGT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 TACAAACGGTTCCCC-A--ATTAGTACCACCTCGTTTATA---------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 TACTAACGGTTCCCCAA--ATTAGTACCACCTCGTTTACA---------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs SSS-SS-SSSSSSSS-SSS-----------S---S---SSSSSSSSSSSS forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AATCGTAAAAGCGTATTATGACTGGGCGGAAACGTATTGTGACGGTGAAC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_1880 ----------GCGTATTATGACTGGGCGGA-------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 CCGGAGACCCAATCCGTGCTTTATTATTAAAAAAAATTAGGGAGAGATAA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 --------------------------------------------AGATAA chr7A_850 --------------------------------------------AGATAA chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------ forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 --GGAGACCCAATCCGTGCTTT---------------------------- reverse_3310 -------------------------------------------------- forward_1923 --GGAGACCCAATCCGTGCTTTA--------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AAGTGGGTTATAGTTTTTTTTTATAGGCAAAGTGGGTTATACTTGAGATA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 AAGTGGGTTATACTTT-TTTT--TAGGCAAAGTGGGTTATACTTGAGATA chr7A_850 AAGTGGGTTATACTTT-TTTTTATAGGCAAAGTGGGTTATACTTGAGATA chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------------S---S--------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 CTGGGCCGGCCCCGTGAGCAGTCGCTCGATCGGGAACGCTGCTGGCGATA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CTGGGCCGGCCTCGTGAGCAGTCGCTCGATCGGGAACGCTGCTGGCGATA chr7A_850 CTGGGCCGGCCCCGTGAGCAGTCGCTCGATCGGGAACGCTGCTGGCGTTC chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 ---------------------------------------------AGCAG chr7B_1_TraesCS7B01G012200 CATATCTTTCCCCTTGAAATACTCTGCCTTGGCGCCTGAACCAACAGCAG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CATATCTTTCCCCTTGAAATACTCTGCCTTGGCGCCTGAACCAACAGCAG chr7A_850 CATATCTTTCCGCTTGAAATACTCTGCCTTGGCGCCTGAACCAACAGCAG chr7D_962 -------------TTGAAATACTCTGCCTTGGCGCCTGAACCAACT---G chr7A_965 -------------TTGAAATACTCTGCCTTGGCGCCTGAACCAACAGCAG chr7D_968 ------------CTTGAAATACTCTGTCTTGGCGCCTGAACCAACAGC-- chr7D_997 -----------------------------------------------CAG chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CTTTCGCTTCTCCTCGCCGGAGCGCCAAGAAACCAAGAACCC-------- chr7B_1_TraesCS7B01G012200 CTTTCGCTTCTCCTCGCCGGAGCGCCAAGAAACCAAGAACCC-------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CTTTCGCTTCTCCTCGCCGGAGCGCCAAGAAACCAAGAACCC-------- chr7A_850 CTTTCGCTTCTCCTCGCCGGAGCGCCAAGAAACCAAGAACCC-------- chr7D_962 CTTTCGCTTCTCCTC-CCGGAGCGCCAAGAAACCAAGAAGGCAAGAACC- chr7A_965 CTTTCGCTTCT--------------------------------------- chr7D_968 -TTTCCCTTCTCCTTGCCGGAGCGCCAAGAAACCAAGAACC--------- chr7D_997 CTTTCGCTTCCCCTCGCCGGAGCTCCAAGAAACCAAGAACCC-------- chr7D_1018 ------------CTCGCCGGAGCTCCAAGAAACCAAGAACCC-------- chr7A_1019 -------------TCGCCGGAGCGCCAAGAAACCAAGAACCCGCTCCCCG chr7B_1041 -----------------------------------AGAGCCC-------- chr7B_1045 ---------------------------------------CCC-------- chr7B_1045 ---------------------------------------CCC-------- chr2B_1045 ---------------------------------------CCC-------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------A------CCGCCTCTGCCCTCCAGCG----- chr7B_1_TraesCS7B01G012200 -------------------A------CCGCCTCTGCCCTCCAGCG----- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------A------CCGCCTCTGCTCT----------- chr7A_850 -------------------A------CCGCCTCTGCTCTCCAGCG----- chr7D_962 -------------------------------------------CG----- chr7A_965 -------------------------------TCTGCTCTCCAGCG----- chr7D_968 ----------------------------GCCTCTGCTCTCCAGCG----- chr7D_997 -------------------ATCATCCCCACCTCCACCGCGCAGCG----- chr7D_1018 -------------------ATCATCCCCACCTCCACCGCGCAGCG----- chr7A_1019 TCTCCGCCGCGCAGATCCCA------CCTCCTCTCCTCCGCGGCG---GT chr7B_1041 -------------------A------CCTCCTCTGCTCTGTAGCGGTCC- chr7B_1045 -------------------A------CCGCCTCTGCTCTCGAGTGGTCC- chr7B_1045 -------------------A------CCGCCTCTGCTCTCGAGTGTCCC- chr2B_1045 -------------------C------CCGCCTCTGCTCTCCAGAGGTCGT chr7D_1050 ---------------------------CGCCTCTGCTCTCCAGCG----- chr7D_1050 ---------------------------CGCCTCTGCTCTCCATCT----- chr7D_1050 ---------------------------CGCCTCTGCTCTCCGGCG----- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 ---GCGCCCGCGGCAGATGCAGCAGTTCCAGGACGGCCACCACGTGCGGC chr7B_1_TraesCS7B01G012200 ---GCGCCCGCGGCAGATGCAGCAGTTCCAGGACGGCCACCACGTGCGGC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ------CCAGCGGCAGATGGAGCAGTTCCAGGACGGCCACCACGTGCGGC chr7A_850 ---GCGCCCGCGGCAGATGCAGCAGTTCCAGGACGGCCACCACGTGCGGC chr7D_962 -----GCCCGCGGCAGATGGATCAGTTTCAGGACGGCCACCACGTGCGGC chr7A_965 ---GCGCCCGCGGCAGAAGGATCAGTTCCAGGACGGCCACCACGTGCGGC chr7D_968 ---GCGCCCACGGAAGATGGAGCAGTTTCAGGACGGCCACCACGTGCGGC chr7D_997 -----CCCATCGACAGATGGAGCAGTTCCAGGACGGCCACCACGTGCGGC chr7D_1018 -----CCCATCGACAGATAGAGCAGTTCCAGGACGGCCACCACGTGCGGC chr7A_1019 CCAGCTCAAGCGACCCATGGAGCTGTTCCAGCACGGCCAGCACGTGCGGC chr7B_1041 --AGCTCAAGCGACCGATGGAGCAGTTCCACCACGGCCAGCACGTGCGGC chr7B_1045 --AGCGCCGGCGACAGATGGAGCAGTTCCAGGACGGCCACCACGTCCGAC chr7B_1045 --AGCGCCGGCGACAGATGGAGCAATTCCAGGACGGCCACCACGTGCGGC chr2B_1045 CTAACTCCGGCAACCGATGGACCAGTTCCTGGACGGCCGCCACGTGCGGC chr7D_1050 ---TCACCGGCGACCGATGGAGCTGTTCCAGGACGGCCAGCACGTGCGGC chr7D_1050 ---TCACCGGCGACCGATGGAGCAGTTCCATCACGGCCAGCACGTGCGGC chr7D_1050 ---TCACCGGCGAAAGATGGAGCAGTTCCATCACGGCCAGCACGTGCGGC chr7D_1080 ---------------GATGGAGCTGTTCCAGGACGGCCAGCACGTGCGGC chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TGCGGAGCCGCGAGCGCGGCATGTACCTGCACGTCGGCGAGGACGGGCAT chr7B_1_TraesCS7B01G012200 TGCGGAGCCGCGAGCGCGGCATGTACCTGCACGTCGGCGAGGACGGGCAT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TGCGGAGCCGCGAGCGCGGCATGTACCTGCACGCCGACGAGGACGGGCGT chr7A_850 TGCGGAGCCGCGAGCGCGGCATGTACCTGCACGCCGACGAGGACGGGCAT chr7D_962 TGCGGAGCCGCGAGCGCGGCATGTACTTGCACGCCGACGAGGACGGGCAT chr7A_965 TGCGGAGCCGCGAGCGCGGCATGTACCTGCACGCCGACGAGGACGGGCAT chr7D_968 TGCGGAGCCGCGAGCGCGGCATGTACCTACACGCCGACGAGGACGGGCAT chr7D_997 TGCGGAGCCGCGAGCACGGCATGTACCTGCACGCCGACAAGGACGGCCGT chr7D_1018 TGCGGAGCCGCGAGCACGGCATGTACCTGCACGCCAACAAGGACGGCCGT chr7A_1019 TGCGGAGCCGCGCGCTGGGCACGTACCTGCACGCCGACGATGACGGGCAG chr7B_1041 TGCGGAACCGCGAGCGCGGCACGTACCTGCACGCCGACGAAGACGGGCAT chr7B_1045 TGCGGAGCCGCGAGCACGGCATGTACCTGCACGCCGACAAGGACGGCCGT chr7B_1045 TTCGGTGCCGCGAGCACGGCATGTACCTGCACGCCGACAAGGACGGCCGT chr2B_1045 TGCGGAGCCGCGTGCACGGCACGTACCTGCACGCCGACGGGGACGGGCAT chr7D_1050 TGCGGAGCCGCGCGCGCGGGACGTACCTGCACGCCGACGACGACGGGCTT chr7D_1050 TGCGCAGCCGCGTGCACGGCACGTACCTGCACGCCGACGAGGACGGCTAT chr7D_1050 TGCGCAGCCGCGTGCACGGCACGTACCTACACGCCGACGAGGACGGGCAT chr7D_1080 TGCGGAGCCGCGCGCGCGGGACGTACCTCCACGCCGACGACGACGGGCTT chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ---------------------------------S--S------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GGGGTCTCCCTCCACCACCGCCGGGCGTCGATGAACGCGGCTTGGGTGGT chr7B_1_TraesCS7B01G012200 GGGGTCTCCCTCCACCACCGCCGGGCGTCGATGAACGCGGCTTGGGTGGT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GGCGTCTCCCTCCACCACCGCCGGGCGTCGATGAACGCGGCTTGGGTGGT chr7A_850 GGCGTCTCCCTCCACCACCGCCGGGCGTCGATGAACGCGGCTTGGGTGGT chr7D_962 GGCGTCTTCCTCCACCACCGCCGGGCGTCGATGAACGCGGCTTGGGTGGT chr7A_965 GGCGTCTCCCTCCACGACCGCCGGGCGTCGATGAACGCGGCTTGGGTGGT chr7D_968 GGCGTCTCCCTCCACCACCGCCGGGCGTCGATGAACGCGGCTTGGGTGGT chr7D_997 GGCGTCTCCCTCCGCCGGCCCCGGGCGTCGATGAACGCGGCGTGGGCGGT chr7D_1018 GGCGTCTCCCTCCGCCGGCCCCGGGCGTCGATGAACGCGGCGTGGGCGGT chr7A_1019 GGCGCCTCCCTCCACCACCGCCGGGCGTCGATGAACGCGGCGTGGGCGGT chr7B_1041 GGCGTCTCCCTCCGCCACCGCCGGGCGTCGATGAACGCGGCCTGGGCGGT chr7B_1045 GGCGTCTCCCTCCGCCGGCACCGGGCGTCGATGAACGCGGCGTGGGCGGT chr7B_1045 GGAGTCTCCCTCCGCCGGCCCCGGGCGTCGATGAACGCGGCGTGGGCAGT chr2B_1045 GGCGTCTCCCTCCACGGGCGCCGCGCGTCAATGAAGGCGGCTTGGGCGGT chr7D_1050 GGCGTCTCCCTCCGCCGGCTCCGCGCGTCGATGAACGTGGCTTGGTTGGT chr7D_1050 GGCGTCAACCTCCGCGTCCGCCGGGCGTCTATGAACGCGGCTTGGGCGGT chr7D_1050 GGCGTCTCCCTCCACCACCGCCGGGCGTCGATGAACGCGGCTTGGGCGGT chr7D_1080 GGCGTCTCCCTCCGCCGGCTCCGCGCGTCGATGAACGTGGCTTGGTTGGT chr7B_1181 ----------------------GGGCGTCGATGAACGCGGCTTGGGTGGT chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs --S----------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GCACTTGTACCACGGCCACGCGG----------------AGTACGTGCTC chr7B_1_TraesCS7B01G012200 GCACTTGTACCACGGCCACGCGG----------------AGTACGTGCTC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GCACTTGTACCACGGCCACGCGG----------------AGTACGTGCTC chr7A_850 GCACTTGTACCACGGCCACGCGG----------------AGTACGTGCTC chr7D_962 GCACCTGTACCACGGCCACGCGG----------------AGTACGTGCTC chr7A_965 GCACTTGTACCACGGCCACGCGG----------------AGTACGTGCTC chr7D_968 GCACTTGTACCACGGCCACGCGG----------------AGTACGTGCTC chr7D_997 GCACTTGTTCCAAGGCGATGA----CGATGC------CCAGTACGTGCTC chr7D_1018 GCACCTGTACCAAGACGATAA----CGATGC------CCAGTACGTGCTC chr7A_1019 GCACGTGCACCATCCCCCACGCGCGCAGG-------TGCCGTACCTGCTC chr7B_1041 GCACTTGTACCAGCCCCCTCGCGCGCAGG-------TGCCGTTCCTGCTC chr7B_1045 GCACCTGTTCCAAGGCGATGA----CGGTTT------CCAGTACGTGCTC chr7B_1045 GCACCTGTACCAAGAAGATGA----CGATGT------CCAGTACGTGCTC chr2B_1045 GCACATCTACCAAGGCGACGCCG-CCGAGGC------TCAGTACGTGCTC chr7D_1050 GCACTTCTATCAG-------------GG---------CCAGTACCTGCTC chr7D_1050 GCACCGGTACCCGGGCGAGAA----CGG---------ACAGTACCTGCTC chr7D_1050 GCACTTGCACCAGTTCCAGAAC-------GC------GCAGTACCTGCTC chr7D_1080 GCACTTCTATCAG-------------GG---------CCAGTACCTGCTC chr7B_1181 GCACGTGTACCAGCACCCCGAGCCCCGAGGCGTGTCTGCCGTACCTACTC chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CTCCACAGCGCCGCCTACGGTCGCTACCTCGCCGCCACGGACGCGCCGGC chr7B_1_TraesCS7B01G012200 CTCCACAGCGCCGCCTACGGTCGCTACCTCGCCGCCACGGACGCGCCGGC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CTCCACAGCGCCGCCTACGGTCGCTACCTCGCCGCCACGGACGCGCCGGC chr7A_850 CTCCACAGCGCCGCCTACGGTCGCTACCTCGCCGCCACGTAAGCGCCGGC chr7D_962 CTCCACAGCGCCGCCTACGGCCGCTACCTCGCCGCCACGGATGCGCCGGC chr7A_965 CTCCACAGCGCCGCCTACGGTCGCTACCTCGCCGCCACGTAAGCGCCGGC chr7D_968 CTCCACAGCTCCGCCTACGGTCGCTACCTCGCCGCCACGGAAGCGCCGGC chr7D_997 CTCCACAGCGCCGCCTACGGCGGCTACCTGACGGCCATGGACGCACCGGC chr7D_1018 CTCCACAGCGCCGCCTATGGTGGCTACCTGGCGGCCATGGACGCACCGGC chr7A_1019 CTCCACAGCGCCGCCTACGGCCTGTACCTCGCCGCCACGGACGGGCCGGC chr7B_1041 CTTCACAGCGCCGCCTACGGCCGGTACCTCGCCGCCACGGGCGCGCCGGC chr7B_1045 CTCCACAGCGCCGCCTACGGCGGCTACCTGACGGCCATGGACGCACCGGC chr7B_1045 CTCCACAGCGCCGCCTATGGCGGCTACCTGGCGGCCATGGACGCACCGGC chr2B_1045 CTACACAGCGCCGCCTACGGCAGCTACCTCGCCGCCACGGACGCGCCGGC chr7D_1050 TTCCAGAGCGCCGCCTACGGTGGCTACCTCGCCGCCACGGCCGCGCCGGC chr7D_1050 CTCCACAGCGCCGCCTACGGCCACTACCTCGCCGCCACGGACGCACCGGC chr7D_1050 CTCCACAGCGCCGCCTACGGCCGCTACCTCGCCGCCACGGACGCGCCGGC chr7D_1080 TTCCAGAGCGCCGCCTACGGTGGCTACCTCGCCGCCACGGCCGCGCCGGC chr7B_1181 CTCCACAGCGCCGCCTACGGCCAGTACCTCGCCGCCACGAACGTGCAGGC chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GCCGCTAGGCCACCGCGGGCTCCGCGTCGAGCTGCGGGACTACGCACAGC chr7B_1_TraesCS7B01G012200 GCCGCTAGGCCACCGCGGGCTCCGCGTCGAGCTGCGGGACTACGCACAGC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GCCGCTAGGCCACCGCGGGCTCCGCGTCGAGCTGCGCGACTACGGACAGC chr7A_850 GCCGCTAGGCCACCGCGGGCTGCGCGTCGAGCTGCGCGACTACGCACAGC chr7D_962 GCCGCTAGGCCACCGCGGGCTCCGCGTCGAGCTGCGGGACTACGCACAGC chr7A_965 GCCGCTAGGCCACCGCGGGCTGCGCGTCGAGCTTCGCGACTACGCACAGC chr7D_968 GCCGCTAGGCCACCGCGGGCTGCGCGTCGAGCTGCGCGACTACGCACAGC chr7D_997 GCCGCTAGGCCACTGCGGGCGCCGCGTCGAGCAGCGCGACTACGACGAAC chr7D_1018 GCCGCTAGGCCACTGCGGGCGCCGCGTCGAGCAGCGCGACTACGAGGAAC chr7A_1019 GCCGGTGGGCCTCCGCGGGTTCCGCGTCGAGCTGCGCAGCTACGACCATC chr7B_1041 GCCGCTTGGCCACCGTGGGCACCGCGTGGAGCAGCGCAGCTACAACCATC chr7B_1045 GCCGCTAGGCCACTCCGGGCGCCGCGTCGAGCAGCGCGACTACGAGGAAC chr7B_1045 GCCGCTAGGCCACCGCGGGCGCCGCGTCGAGCAGCGCGACTACGAGGAAC chr2B_1045 GCCGCGCGGCCACCGCGGGCTCCGCGTCGAGCAGCGCAACTACGACGACG chr7D_1050 GCGGCGCGGCCACCGCGGGCGCCGCGTCGAGCAGCTCGACTACTATCACT chr7D_1050 GCCGCTAGGCCACCGCGGGCTCCGCGTCGAGCAGCGCGACTACGACCATC chr7D_1050 GCCGCTAGGCCACCGCGGGCTCCGCGTCGAGCAGCGCAACTACAACCATC chr7D_1080 GCGGCGCGGCCACCGCGGACGCCGCGTCGAGCAGCTCGACTACTATCACT chr7B_1181 GCCGCAGGGCCACCACAGGCACCGCGTCGAGCAGCGGGGCTGCGACCATC chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CGGAGGTGCAGGCCATCATGTGGAAGGCCGACGGGGTCGACTCTGGGAAC chr7B_1_TraesCS7B01G012200 CGGAGGTGCAGGCCATCATGTGGAAGGCCGACGGGGTCGACTCTGGGAAC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CGGAGGTGCAGGCCATCATGTGGAAGGCCGACGGGGCCGACTCTGGGAAC chr7A_850 CGGAGGTGCAGGCCATCATGTGGAAGGCCGACGGGGTCGACACCGGGAAC chr7D_962 CGGAGGTGCAGGCCATCATGTGGAAGGCCGACGGAGCCGACTCTGGAAAC chr7A_965 CGGAGGTGCAGGCCATCATGTGGAAGGCCGACGGGGCCGACTCTGGGGAC chr7D_968 CGGAGGTGCAGGCCATCATGTGGAAGGCCGACGGGGCCGACTCTGGGAAC chr7D_997 GGGAGGAGGAGGACGTCAGGTGGCAGCCCGTCAGGTTCGGGAGCGGGGAC chr7D_1018 GGGAGGAGGAGGCCGTCAGGTGGCGGCCCGTCAGGTTCGGGAGCGGGGAC chr7A_1019 GCGAGGCGGACGCGGTATGCTGGACGGCCAGCCGGACGGGGTCCGGGGAC chr7B_1041 CAGAGGAGGAGGCAGTATTTTGGATGGCCGTACGGACGGAATTCCGGGAC chr7B_1045 GGGAGGAGGAGGATGTCAGGTGGCAGCCCGTCAGGTTCGGGACCGGGGAC chr7B_1045 TGGAGGAGGAGGCCGTCAGGTGGCGGCCCGTCAGGATCGTGCCCGGGGAC chr2B_1045 AGGAGGAGGAGGCCATCAGGTGGGAGGCCGTCAGGTTCGGGTCCGGGGAC chr7D_1050 CGGAGGTGGATCCAATGCTTTGGCAGGCCGTCCAGATGGAGA-------- chr7D_1050 CTGAGGTGCAGCCAGTCGTCTGGCAGGCCATCCTGTCAGAATCCGAGGAA chr7D_1050 CCGAAGTGGATGCATTGGTTTGGCAGGCCATCCTGTCGGAATCCGGGGAA chr7D_1080 CGGAGGTGGATCTAATGCTTTGGCAGGCCGTCCAGATGGAGA-------- chr7B_1181 CGGAGGTGGATCTAATCCCTTGGCGGGCCATCCGGACGGAATCCGGAGAC chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GACGTCCTGCTCTGGCAGTTCACCGGCCGCTGCCTCCGCGCCAACGGG-- chr7B_1_TraesCS7B01G012200 GACGTCCTGCTCTGGCAGTTCACCGGCCGCTGCCTCCGCGCCAACGGG-- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GACGTCCTTCTCTGGCAGTTCACCGGCCGCTGCCTCCGCGCCAACGGG-- chr7A_850 GACGTCCTCCTCTGGCAGTTCACCGGACGCTGCCTCCGCGCCAACGGG-- chr7D_962 GACGTCCTGCTCTGGCAGTTCACCGGCCGCTGCCTCCGCGCCAACGGG-- chr7A_965 GACGTCCTGCTCTGGCAGTTCACCGGCCGCTGCCTCCGCGCCAACGGG-- chr7D_968 GACGTCCTGCTCTGGCAGTTCACCGGCCGCTGCCTCCGCGCCAACGGG-- chr7D_997 TACATCCTGCTCCGCCACGCCAGCGGCCGCTTCCTCCGCGCCAACGGG-- chr7D_1018 TACATCCTGCTCCGCCACGCCAGCGGCCGCTTCCTCCGCGCCAACGGG-- chr7A_1019 GACGTCCGGCTCCAGCACTTCAACCTCGGCTGCCTCCGCGCCAACGGC-- chr7B_1041 GACGTCCTGCTCCAGCACTTCAACGGCGGCAGCCTCCGCGCCAACGGG-- chr7B_1045 TACATCCTGCTCCGCCACGCCAGCGGCCGCTTCCTCCGCGCCAACGGG-- chr7B_1045 TACATCCTGCTCCGCCACGCCAGCGGCCGCTTCCTCCGCGCCAACGGG-- chr2B_1045 GACGTCCTGCTCCGCCACGTCACCGGCCGCTGCCTCCGCGCCAACGGGCC chr7D_1050 -ACCTCTTCCTCAATAACATCAACGGCGGAAACCTCCGCGCCAACGGG-- chr7D_1050 GAGGTCTACCTCCGCAACATCGGCGGCGTCTGCCTCCGCGCCAACGGG-- chr7D_1050 GAGGTCTACCTCCGCCACATCGGCGGCCGCCGCCTCCGCGCCAACGGG-- chr7D_1080 -ACCTCTTCCTCAACCACATCAACGGCGGCAACCTCCGCGCCAACGGG-- chr7B_1181 GAAGTCTACCTCGACCACTTCCACGGCGGCTGCCTCCGCGCCAACTGG-- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 ----AGGTACCTCAGCT---------GGAACAATGGCGTCAGCGCCGAGG chr7B_1_TraesCS7B01G012200 ----AGGTACCTCAGCT---------GGAACAATGGCGTCAGCGCCGAGG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ----AGGTACCTCAGCT---------GGAACAATGGCGTCAGCGCCGAGG chr7A_850 ----AGGTACCTCAGCTCAGTCAGCTGGAACAATGGCGTCAGCGCCGAGG chr7D_962 ----AGGTACCTCAGCT---------GGAACAATGGCGTCAGCGCCGAGG chr7A_965 ----AGGTACCTCAGCT---------GGAACAATGGCGTCAGCGCCGAGG chr7D_968 ----AGGTACCTCAGCT---------GGAACAATGGCGTCAGCGCCGAGG chr7D_997 ----AAGTACCTCCCCT---------GGAACAACGGCGCCAGCGTCGACG chr7D_1018 ----AAGTACCTCCCCT---------GGAACAACGGCGCCAGCGTCGACG chr7A_1019 ----AAGTACCTCCCCT---------GGAACAACGGCGCCAGCATCGGCC chr7B_1041 ----AAGTACCTCCCCT---------GGAACAACGGCGCCAGCGTCG--- chr7B_1045 ----AAGTACCTCCCCT---------GGAACAACGGCGCCAGCGTCGACG chr7B_1045 ----AAGTTCCTCCCCT---------GGAACAACGGCGCCAGCGTCG--- chr2B_1045 CGGGAGGTATCTCCCCT---------GGAACAATGGCGTCAGCGTCG--- chr7D_1050 ----AGGTACCGCCCCT---------GGAACAACGGCGTCAGCGTCG--- chr7D_1050 ----AGGTAC------T---------GGAACACCGACGCCAGCGTCG--- chr7D_1050 ----AGGCAC------T---------GGAACACCGACGCCAGCGTTG--- chr7D_1080 ----AGGTACCGCCGCT---------GGAACAACGGCGTCAGCGTCG--- chr7B_1181 ----AA------------------------CACCGGCGTCAGCGTCAG-- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 ACATCGAGGACACCTACAT-----------------------CGTCAGCA chr7B_1_TraesCS7B01G012200 ACATCGAGGACACCTACAT-----------------------CGTCAGCA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ACATCGAGGACACCTACAT-----------------------CGTCAGCA chr7A_850 ACATCGAGGACACCTACAT-----------------------CGTCAGCA chr7D_962 ACATCGAGGACACCTACAT-----------------------CGTCAGCA chr7A_965 ACATCGAGGACACCTACAT-----------------------CGTCAGCA chr7D_968 ACATCGAGGACACCTACAT-----------------------CGTCAGCA chr7D_997 ACTTCG---------ACAC-----------------------CGTCAGCA chr7D_1018 ACTTCG---------ACAC-----------------------CGTCAGCA chr7A_1019 ACATCG---------ACGG-----------------------CGCCAGCA chr7B_1041 ---GCT---------ACATCAACGGCATCCA--------CGACATGAGCA chr7B_1045 ACTTCG---------ACAC-----------------------CGTCAGCA chr7B_1045 ---TCG---------ACAC-----------------------CGTCAGCA chr2B_1045 ---ACG---------ACATCGACGACATCGGCTGATCGGCAACGCCAGAA chr7D_1050 ---ACC---------ACATCGACGACATCAA--------CAACATCAGCA chr7D_1050 ---ACT---------TCGTCGACGACCTCGA--------CAACATCAGCA chr7D_1050 ---ACT---------ACGCCGACGACCTCGA--------CAACATCAGCA chr7D_1080 ---ACC---------ACATCGACGACATCAA--------CAACATCAGCA chr7B_1181 ----------------CGTCGACGACCCCGA--------CAACCCCAGCC chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CGATGTTGCACTGGGTCGTGGAGCCCATCCCCGCCAGGGAGAGCATGCC- chr7B_1_TraesCS7B01G012200 CGATGTTGCACTGGGTCGTGGAGCCCATCCCCGCCAGGGAGAGCATGCC- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CGATGATGCACTGGGTAGTGGAGCCCATCCCCGCCAGGGAGGGCACGCC- chr7A_850 CGATGATGCACTGGGTCGTGGAGCCCATCCCCGCCAGGGAGAGCATGCC- chr7D_962 CGATGATGCACTGGGTAGTGGAGCCCATCCCCGCCATGGAGGACATGCC- chr7A_965 CGATGATGCACTGGGTAGTGGAGCCCATCCCCTCCAGGGAGGGCATGCC- chr7D_968 CGATGATGCACTGGGTAGTGGAGCCCATCCCCGCCATGGAGGACATGCC- chr7D_997 CGATGACGCACTGGGTCGTGGAGCGCATCCCCGCCAGGGAGGGCATGCC- chr7D_1018 CGATGACGCACTGGGTCGTGGAGCGCATCCCCGCCAGGGAGGGCATGCC- chr7A_1019 CGATGATGCACTGGGTCGTGGAGCCCATCCCCGCCCGGGAGACCATGCC- chr7B_1041 CGATGATGCACTGGGTCGTGGAGCCCATCCCCGCCAGGGAGATCATGCC- chr7B_1045 CGATGACGCACTGGGTCGTGGAGCGCATCCCCGCCAGGGAGGGCATTCC- chr7B_1045 CGATGACGCACTGGGTCGTGGAGCGCATCCCCGCCAGGGAGGGCATGCC- chr2B_1045 CGATGATGCTCTGGGTGGTCGAGCCCATCCCTGCCAGGGAGGGCATGCC- chr7D_1050 CGATGATGCACTGGGTCGTGGAGGTCATCCCCGCCAGGGAGATCATGCC- chr7D_1050 GGAAGATGCTCTGGGTCGTGGAGCAAATCCCCGCCAGGGAGGTCATGCC- chr7D_1050 GGAAGATGCTCTGGGTCGTGGAGGACATCCCCGCCAGGGAGGTCGCGCC- chr7D_1080 CCATGATGCACTGGGTCATGGAGGTCATCCCCGCCAGGGAGATCATGCC- chr7B_1181 CGACGACGCGCTGGGTTGTGGAGCCCATCCCCGCCACGCGGAGCATGCCT chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----S-------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----TCCCCTTCCACGTCAGACGGGGGTGAGTCCGCCATG-------CC chr7B_1_TraesCS7B01G012200 -----TCCCCTTCCACGTCAGACGGGGGTGAGTCCGCCATG-------CC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -----TCCCCTTCCACGTCCGACTGGGGTGAGTCCGCCATG-------CT chr7A_850 -----TCCCCTTCCACGTCAGACGGGGGTGAGTCCGCCATG-------CC chr7D_962 -----CCCCCTTCCACGTCCGACTGGGGTGAGTCCGCCATG-------CC chr7A_965 -----TCCCCTTCCACCTCCGACTGGGGTGAGTCCGCCATG-------CC chr7D_968 -----CCCCCTTCCACGTCCGACTGGGGTGAGTCCGCCATG-------CC chr7D_997 -----T-------------------------------------------- chr7D_1018 -----T-------------------------------------------- chr7A_1019 -----TCCCCTCCCACGTTCGACCGGGGTGAGTCCGCCATG-------CC chr7B_1041 -----TCCCCTTCCACGTTCGACTGGGGTGAGTCCGCCATG-------CC chr7B_1045 -----T-------------------------------------------- chr7B_1045 -----T-------------------------------------------- chr2B_1045 -----TCCCCTTCCACGTCCGACCGGGGTGAGTTCGCCTTCGCCATGCCC chr7D_1050 -----TCGCCTTCCACGTCCGTCTCCGGTGAGTCCGCCATG-------TC chr7D_1050 -----TCCGCTTCCACGTCCGATTGGGGTGAGCCCGCCATG-------CC chr7D_1050 -----TCCCCTTCCACGTCCGACTGGGGTGAGCCCGCCATG-------CC chr7D_1080 -----TCGCCTTCCACGTCCGTCTCCGGTGAGTCCGCCATG-------TC chr7B_1181 CGCCTTCCACTTCCACGTCCGATTGGGGTGAGTCCGCCATG-------CC chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CGCTTCGTGATTCTTCCCGA----ATTTGCGCGAATTGGGTGG------- chr7B_1_TraesCS7B01G012200 CGCTTCGTGATTCTTCCCGA----ATTTGCGCGAATTGGGTGG------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CGCTTCTTGATTCTTCTTGGTT---------------------------- chr7A_850 CGCTTCGTGATTCTTCCCGA----ATTTGCGCGAATTGGGTGG------- chr7D_962 CGCTTCTTGATTCTCCCCGA----ATTTGTGCGAATTGGGTGG------- chr7A_965 GGCTTCTTGATTCTCCCCGA----ATTTGCGC------------------ chr7D_968 CGCTTCTTGATTCTCCCCGA----ATTTGCGCGAATTGGGTGG------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 CGCTTCTTGATTCTTCCCCATCGAATTCGCGCGAGCTGGGTTCTTGGATT chr7B_1041 ---TTCTTAATTCTTTCCGATCGAATTTGCGCGAGCTGGGT--------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 CGCTTCTTGATTCTTCCC-------------------------------- chr7D_1050 TGCTTCTTGATTCTTCCCGA----ATTTGCGCGAATTGGGT--------- chr7D_1050 CGTTCCTTGATTCTTCCCCA----ATTTGCGTGAATTGG----------- chr7D_1050 CGTTCCTTGATT---------------TGCGTGAATTGA----------- chr7D_1080 TGCTTCTTGATTCTTCCCGA----ATTTGCGCGAATTGGGT--------- chr7B_1181 CGCTTCTTGATTCTTCCCGA----ATTTGCGCGAATTGGGTTCTTGG--- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----------GCATGCGTCGGAATTTGACCGCAAAGATTTCAAATCGTG chr7B_1_TraesCS7B01G012200 -----------GCATGCGTCGGAATTTGACCGCAAAGATTTCAAATCGTG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ------------------------------------GATTGCAAATCGTG chr7A_850 -----------ACATGCGTCGGAATTTGACCGCAAAGATTTCAAATCGTG chr7D_962 -----------ACATGCGTCGGAATTTGACCGCAAAGATTGC-------- chr7A_965 -------------------CGGAATTTCACCGCAAAGATTGCAAATCGTG chr7D_968 -----------ACATGCGTCGGAATTTGACCGCAAAGATTGC-------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 GGACGTCGTTAACATGCATCGGAATATGACCGCGGAGATCGCAAATCGTG chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------ATGCATCGGAATTTGACCGCAAAGATTGCAAATCGTG chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----------S-------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TTGATTTCATTGGCCTGCGAGCAATTC-TTGGCTCTGTTCTTG------- chr7B_1_TraesCS7B01G012200 TTGATTTCATTGGCCTGCGAGCAATTC-TTGGCTCTGTTCTTG------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TTGATTTCATTCGTCCGCGAGCAATTC-TT-------------------- chr7A_850 TTGATTTCATTCGCCTGCGAGCAATTC-TTGGCTCTGTTCTTG------- chr7D_962 ------------------GAGCAATTCTTTGGCTCTGTTCTTGCCAGATT chr7A_965 CTAATTTCACTCGTCTGCGAGCAATTC-TTGGCTCTGTTCTTGCCAGATT chr7D_968 ------------------GAGCAATTCTTTGGCTCTGTTCTTGCCAGATT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 TTAATTTCGTTCGCCTGGGAGCAATTC-TTGGCTCGGTTCTTG------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------GCTCTGTTCTTGCCAAATT chr7D_1080 -------------------------------------------------- chr7B_1181 TTAATTTCATTCTGTTGGGAGAAATTC-TTGGCTC--------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----------S-------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -GCGCTTCTTGGCTCTGTTTCAAGTTTCTTTGGCTTCTTGCGCCTCTGCA chr7B_1_TraesCS7B01G012200 -GCGCTTCTTGGCTCTGTTTCAAGTTTCTTTGGCTTCTTGCGCCTCTGCA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------CTTGGTTGCCATCCCTGTTTCTTTGGCTTCTTGCGCCTCTGCA chr7A_850 -GCGCTTCTTGGCTCTGTTTCAAGTTTCTTTGGCTTCTTGCGCCTCTGCA chr7D_962 TGCGCTTCTTGGTTACCACTCCTGTTTCTTTGGT---------------- chr7A_965 TGCGCTTCTTGGTTGCCACCCCTGTTTCTTTGGCTTATTGCGCCTCTGCA chr7D_968 TGCGCTTCTTGGTTACCACTCCTGTTTCTTTGGT---------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TGCGCTTCTTGGTTTCTTTGATT--------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TTCCCCGGCATCCTGATGATTCCTTGCGTCTCAAC--TGCAGTTTCCCTT chr7B_1_TraesCS7B01G012200 TTCCCCGGCATCCTGATGATTCCTTGCGTCTCAAC--TGCAGTTTCCCTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TTCCCCGGCATCATGATGGTTCTTTGCGACTCAAC--TGCAGCTTCCCTT chr7A_850 TTCCCCGGCATCCTGATGATTCCTTGCGTCTCAAC--TGCAGTTTCCCTT chr7D_962 ----------------TGATTCTTTGCGACTCAAC--TGCAGCTTCTCTT chr7A_965 TTCCCCGGCATCATGATGGTTCTTTGCGACTCAAC--TGCAGCTTCCCTT chr7D_968 ----------------TGATTCTTTGCGACTCAAC--TGCAGCTTCTCTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ----------TGATGATGGTTCTTTGCGACTACGGATTGCAGCTTCCCCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 ------GGCATGATGATGTTTCTTTGCGACTCAAC--TGCAGCTTCCCTT chr7D_1773 ------GGCATCATGATGTTTCTTTGCGATTCAAC--TGCAGCTTCCCTT chr7B_1780 -------------TGATGTTTCTTTGCGACTCAAC--TGCAGATTCCCTT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -----------------------------------ACTGCAGTTTCCCTT reverse_8330 -------------------------------------------------- input_sequence_40203 CCCCAGAATACTGGACGCCCT---------GTTGCCGTCGCGGCTGATCG chr7B_1_TraesCS7B01G012200 CCCCAGAATACTGGACGCCCT---------GTTGCCGTCGCGGCTGATCG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CCCCGGAATACTCACTGCCCT---------GCTGCCGTCGCGGCTGATCG chr7A_850 CCCCGGAATACTGGACGCCCT---------GTTGCCGTCGCGGCTGATCG chr7D_962 CCCCGGAATACTCACCGCCCT---------GTTGCCGTCGCGGCTGATCG chr7A_965 CCGCGGAATACTCGACGCCCT---------GTTGCCGTCGCGGCTGATCG chr7D_968 CCCCGGAATACTCACCGCCCT---------GTTGCCGTCGCGGCTGATCG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CC------------------------TGACGTTGCGGTCGCGGCTGATCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 CACCCGAAGAGTCATCA---CCGTGTTGCCGATGCCGTCGCGGGTGATCG chr7D_1773 CACCCGAAGAGTCATCA---CCGTGTTGCCGATGCCGTCGCGGGTGATCG chr7B_1780 CACCCGAAGAATCATCGGCCCCGTGTTGCCGATGCCGTCGCGGGTGATCG SNPs ----S--------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 CCCCA--------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TGTACGTGCGGGCGGGGGCCGACGGGACCCGCATCAGCCACGGCGCGTTG chr7B_1_TraesCS7B01G012200 TGTACGTGCGGGCGGGGGCCGACGGGACCCGCATCAGCCACGGCGCGTTG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TGTACGTGCGGGCGGGCGCCGACGGGACCCTCATGAACCACGGCGCGTTG chr7A_850 TGTACGTGCGGGCGGGGGCCGACGGGACCCGCATCAGCCACGGCGCGTTG chr7D_962 TGTACGTGCGGGCGGGGGCCGACGGGACCCGCATGAACCACGGCGCGTTG chr7A_965 TGTACGTGCGGGCGGGCGCCGACGGGACCCGCATCAACCACGGCGCGTTG chr7D_968 TGTACGTGCGGGCGGGGGCCGACGGGACCCGCATGAACCACGGCGCGTTG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TGTACGTGTTGCCGACCGTCTACGGGGCCCTCCTCGCCCGCGGCACGTTC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 TGTACGTGCGGGCGGGCGCCGACGGGAGCCGCATCGCCCGCGGCGCCTTC chr7D_1773 TGTACGTGCGGGCGGGCGCCGACGGGAGCCGCATCGCCCGCGGCGCCTTC chr7B_1780 TGTACGTGCGGGCGGGCGCCGACGGGAGCCGCATCGGCCGCGGCGCCTTC SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GTGTTCAGGGGCAGGTCCGTGGTCCGTCTGAGGAACAAGCTGGTGCGCCG chr7B_1_TraesCS7B01G012200 GTGTTCAGGGGCAGGTCCGTGGTCCGTCTGAGGAACAAGCTGGTGCGCCG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GTGTTCAGGGGCAGGTCCGTGGTCCGGCTGAGGAAGAAGCTGGTCCGCCG chr7A_850 GTGTTCAGGGGCAGGTCCGTGGTCCGCCTGAGGAAGAAGCTGGTGCGCCG chr7D_962 GTGTTCAGGGGCAGGTCCGTGGTCCGCCTTAGGAAGAAGCTGATGCGCCG chr7A_965 GTGTTCAGGGGCAGGTCCGTGGTCCGCCTGAGGAACAAGCTGGTACGCCG chr7D_968 GTGTTCAGGGGCAGGTCCGTGGTCCGCCTTAGGAAGAAGCTGATGCGCCG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GTGTTCAGGGGGAGGTCCGTGTTCCGCCTGAGGAAGGAGCTGGCCAGGCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 GTGTTCGAGGGGAGGTCTGTGTTCGACCTGAGGAAAACGCTTATCCGCCG chr7D_1773 GTGTTCGAGGGGAACTCCGTGTTCGACCTGAGGGAAACGCTGATCCGCCG chr7B_1780 GTGTTCGAGGGGAACTACGTGTTCGACCTGAGGAAAGAGCTGATCCGCCG SNPs --------------------------S----------------------- forward_1880 -------------------------------------------------- reverse_3177 --------------------------TCTGAGGAACAAGCTGGTGC---- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GC------------------TGGACGTCTCCGACCTCGTCATGTGCGTCG chr7B_1_TraesCS7B01G012200 GC------------------TGGACGTCTCCGACCTCGTCATGTGCGTCG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GCTGGGTGAC------ATCATGGACGTCTCCAACCTCGTCATGTGCGTCG chr7A_850 GC------------------TGGACGTCTCCGACCTCGTCATGTACGTCG chr7D_962 GC------------------TGGACGTCTCCGACCTCGTCATGTGCGTCG chr7A_965 GC------------------TGGACGTCTCCAACCTCGTCATGTGCGTCG chr7D_968 GC------------------TGGACGTCTCCGACCTCGTCATGTGCGTCG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GCTGGGCGTTTTCGTAAACGTGGAGGTCTCCGACCTCTTCATGTGCCTCC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 CCTGGAGGCC------ACCATGGGCGTCTCCGACGTCGCCATGTGCGTCG chr7D_1773 CCTGGAGGCC------ACCATGGGCGTCTCTGACGTCGCCATGTGCGTCG chr7B_1780 CCTGGAGGCC------ACCATGGGCGTCTCCGACGTCGCCATGTGCGTCG SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 AAGCGGGTACTTTCGGGCGGCTTACTCCACTGGTCGTCGACCTGCCCCGC chr7B_1_TraesCS7B01G012200 AAGCGGGTACTTTCGGGCGGCTTACTCCACTGGTCGTCGACCTGCCCCGC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 AAGCGGGTAGTTTCGGGCGTCTTACTCCACTGGTCGTCGACCTGCCCCGC chr7A_850 AAGCGGGTACTTTCGGGCGGCTTACTCCACTCGTCGTCGACCTGCCCCGC chr7D_962 AAGCGGGTACTTTCGGGCGGCCTACCCCACTCGTCGTCGACCTGCCCCGC chr7A_965 AAGCGGGTACTTTCGGGCGGCTTACTCCACTCGTCGTCGACCTGCCCCGC chr7D_968 AAGCGGGTACTTTCGGGCGGCCTACCCCACTCGTCGTCGACCTGCCCCGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CCACACAGGAT---GGCCGGCTTTTTCCACTCGTCGTCGACCTGCCCCGC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 AAGCGGGTACTTTCGGGCGCCCTACCCCACTCGTCGTCGACCTGCCCCGC chr7D_1773 AAGCGGGTACTTTCGGGCGGCGTACCCCACTCGTCGTCGACCTGCCCCGC chr7B_1780 AAGCGGGTACTTTCGGGCGGCCTACCCCACTCGTCGTCGACCTGCCCCGC SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 AGCGTCTGGCACCTCCACACCGTCGTCTTCGCGTCCGGGACGCCAGGTGA chr7B_1_TraesCS7B01G012200 AGCGTCTGGCACCTCCACACCGTCGTCTTCGCGTCCGGGACGCCAGGTGA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 AGTGTCCGGGGCCTCCACATCGTCGTCTTCGCGGCCGGTGAGACG----- chr7A_850 AGCGTCCGGGACCTCCACATCATCGTCTTCGCGTCCGGGACGCCAGGTGA chr7D_962 AGCGTCCGGGACCTCCACATCGTCGTCTTCGCGGCCGGGACGCCAGGTGA chr7A_965 AGCGTCCGGGACCTCCACATCGTCGTCTTCGCGGCCGGGACGCCAGGTAA chr7D_968 AGCGTCCGGGACCTCCACATCGTCGTCTTCGCGGCCGGGACGCCAGGTGA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 AGCGGCCAGACCCTCCACATCATCGTCGCCGTCGCCGGGACGCCTGGTGA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 AGCCGCCAGAACCTCCACATCCTCGTCTTCCCCGTCGGGACGCCAGGTGA chr7D_1773 AGCCGCCAGAACCTCCACATCCTCGTCTTCGCGGTCGGGACGCCAGGTGA chr7B_1780 AGCCGCCAGAACTTCCACATCGTCGTCTTCCCGGTCGGGACGCGAGGTGA SNPs ------S--S---------S------------------------------ forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 ---------CACCTCCACACCGTCGTC----------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GAGGCCCTCCT--------ACTTCCTACTAATCTCC-------------- chr7B_1_TraesCS7B01G012200 GAGGCCCTCCT--------ACTTCCTACTAATCTCC-------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ---------------CCCAACTTCCTACTGATCGCC-------------- chr7A_850 GAGGCCCTCCATCTTCCCAACTTCCTACTAATCTCC-------------- chr7D_962 GAGGCCCTTCATGTCCCCAACTTCCTAGTAATCTCC-------------- chr7A_965 GGGGCCCTTCATGTTCCCAACTTCCTAGTAATCTCC-------------- chr7D_968 GAGGCCCTTCATGTCCCCAACTTCCTAGTAATCTCC-------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GAGCCCCTCCATATCCTCAACTTCCTACTCTTCTCC-------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 A---CCCTCTG--------TCTCCCTACTGATCACCCTTTGCAAGATG-- chr7D_1773 A---CCCTCCG--------TGTCCCTACTGATCACCCTTTGCAAGATGTG chr7B_1780 A---CC--------------CTCCCTACTGATCATTATG----------- SNPs ----------S--------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------TTGGGTTT-----------------------TATGTTAATGGA chr7B_1_TraesCS7B01G012200 -------TTGGGTTT-----------------------TATGTTAATGGA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------TTCTGTTT-----------------------TAGTTCCCCT-- chr7A_850 -------TTGGGTTT-----------------------TATGTTAATGGA chr7D_962 -------TTTTGCATTGCCGTTATCTTTTGGGTTACA------------- chr7A_965 -------TTTTGCATTGCCATGATCTTTTGGGTTACA------------- chr7D_968 -------TTTTGCATTGCCGTTATCTTTTGGGTTACA------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------TTGTCAGT-----------------------TGATTGCTAATT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 --------------TTGCCATGATCTTTTGGGTTCTACTATTTTAATGGA chr7D_1773 CATTATTTTCTGCATTGCCATGATCTTTTGGGTTCTA---TTTTAATGGA chr7B_1780 -------TTCTGCATTGCCATGATCTTTTGGGTTCTA---TTTTAATGGA SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GTAGTCTG---CTTGTGT-------------------------------- chr7B_1_TraesCS7B01G012200 GTAGTCTG---CTTGTGT-------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ----TCTG---CTTGTGC-------------------------------- chr7A_850 GTAGTCTG---CTTGTGT-------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GAGACTACTAATCTGTCTGTGCTTGGAAATTTTGGGTGTTCTAAACTGCT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 GTACTGTCTGCCTCGTGT-------------------------------- chr7D_1773 GTACTGTCTGCCTCGTGT-------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----------TGGAAAACAGTGTACTGAAACA----------------- chr7B_1_TraesCS7B01G012200 -----------TGGAAAACAGTGTACTGAAACA----------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -----------TGGAAACTGTTGGA------------------------- chr7A_850 -----------TGGAAAACAGTGTACTGAAACA----------------- chr7D_962 -----------TGGAAAACAGTGTACTGAAATTGTT-------------- chr7A_965 -----------TGGAAAACAGTGTACTGAAATTGTTACAGCTT------- chr7D_968 -----------TGGAAAACAGTGTACTGAAATTGTTACAGTTT------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 AGTCTGAACTCTGAAAAACAGTTTACTGACACCGGTGGAGT--------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -----------TGGAAAACAGTGTACTGAATTTGTTGCAGTCTGAAAAAC chr7D_1773 -----------TGAAAAACAGTGTACTGAATTTGTTACAGTTTGAAAAAT chr7B_1780 --------------AAAACAGTGTACTGAATTTGTTACAGTCTGAAAAAT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 --------------GCAGCT----------------------AATCTGCT chr7B_1_TraesCS7B01G012200 --------------GCAGCT----------------------AATCTGCT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -----ACTGAAACTGATGGAAATTGATGTACATTGTTTACTGAAACTGTT chr7A_850 --------------GCTGCT----------------------AATCTGCT chr7D_962 -------------------------------------------------- chr7A_965 -----ACTGAAACTGCTGCT----------------------AATCTGCT chr7D_968 -----ACTGAAACTGCTGCT----------------------AATCTGCT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ------CTGAAACTTTTGAT----------------------AATCCGTT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 AGTTCACTGAAGC------------------------------------- chr7D_1773 AGTTCACTGAAACTGCTGCT----------------------AATCTGCT chr7B_1780 AGTTCACTGAAAGTGCTGCT----------------------AATCTGCT SNPs ----------------S--------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TCAGTCAGGAGT-------------------------------------- chr7B_1_TraesCS7B01G012200 TCAGTCAGGAGT-------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TCAGTTAGGACCGTTGTTT------------------------------- chr7A_850 TCAGTCAGGAGT-------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 TCAGTCAGGACTCC------------------------------------ chr7D_968 TCAGTT-------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TCAAACTTTTGATGCTACTGTTCTTTGATTCAGTTCTTCAATTTAATACG chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TCAGCTAGGACTTGGCAATTGTTTGAACTGTTGTATTTGTTACAGTCTGA chr7B_1780 TCAGTTAGGACTTGGCAATTGCTTGAAAG--------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ATATTTTGGGTT-------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 AGCTTAGTTGGTCGTTAGATTTTCACACTCTTGGAACTTAAAAGCCCAAA chr7B_1780 --------------------------------------TAAAAGCCCAAA SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ---------TCATTTCAGTT-----GAGTGCTAACCCGC----------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TCAGTTCAGTCATATCAGTT-----CAGCTTCACATATGATTTAGCCAAT chr7B_1780 TCAGTTCAGCTTCACATAGAAAATACTGGTTTCTATATTATTTAGCCCTT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GGTGTAA-TCAGTAAGAAAATTCAGGTTGTATCCCAGAACCATTACATGG chr7B_1780 TGTGTAATTCAGAACGAAAATTCAGCTTGTATCCCAAAACCATTACATGG SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ------------------------CAGTGCTTGAAAATTTTGGGTGTTCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 AAATTAGTTTCTGCATGCACATTACAGTGCTTGGAAAACAGTGTACTGAA chr7B_1780 AAATTAGTTTCTGCATGCACATTACAGTGTTGTCTGAAGC---------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 AAACTACTAGTCTGAA---------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 ---------------------------------TTAGCTGGTCTTCTTCA chr7D_1773 TTTGTTACAGTCTGAAAAACAGTTCACTGAAGCTTAGCTGGTTTTCTTCA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -TTAGGACTTGACAATTGTTTAAACTGCTGTCTTTGCATTGTGTGGCCGT chr7B_1_TraesCS7B01G012200 -TTAGGACTTGACAATTGTTTAAACTGCTGTCTTTGCATTGTGTGGCCGT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -TTAGGACTTGACAATTGTTTAAACTGCTGTCTTTGCAT----------- chr7D_962 --------------------TGAATTGTTGTCTTTTCATTGTGA--CCGT chr7A_965 -----------GCAATTGTTTGAACTGTTGTCTTTTCATTGTGG--CCGT chr7D_968 ----GGACTTGACAATTGTTTGAATTGTTGTCTTTTCATTGTGA--CCGT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 GTTAGGACTTTGCAATTGCTTGAACTGTTGTATTTGCACTGTGT--CTGT chr7D_1773 GTTAGGACTTTGCAATTGCTTGAACTGTTGTATTTGCACTGTGT--CTGT chr7B_1780 -------------------------------------------------- SNPs --------------------------------------------SS---- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 --------------------------------------------GGCCGT forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TGGATTAATCTGTC---TGTGTAGTCAGAAGCTTAGTTGGTTTTTAC--- chr7B_1_TraesCS7B01G012200 TGGATTAATCTGTC---TGTGTAGTCAGAAGCTTAGTTGGTTTTTAC--- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ---------------------TATTCTGAAGCTTAGTTGGTTGTTACATA chr7A_850 -----------------TGTGTAGCCTGAAGCTTAGTTGGTTGTTAC--- chr7D_962 TGGATTAATCTGCC---TGTGTAATCTGAAGCTTATTTGGTTGTTAC--- chr7A_965 TGGCAATTGTTTCAC----TGTGGTCTGAAGCTTAGTTGGTTGTTAC--- chr7D_968 TGGATTAATCTGCC---TGTGTAATCTGAAGCTTATTTGGTTGTTAC--- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ------AAACAGTT---TATGTGGTCTGAAACTTTTCCTAGTGTGTTTCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 TGGATTAATCTGCTCCATGTGTAGTCTGAAGCTTAGCTGGTTGCTAG--- chr7D_1773 TGGATTAATCTGCTCCATGTGTAGTCTGAAGCTTAGCTGGTTGCTAG--- chr7B_1780 ----TTAATCTGCC---TGTGTAGTCTGAAGCTTGGTAGGTTGTGAC--- SNPs --------------------------S---------------S------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 TGGATTAATCTGTCTG---------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----------------ATATTCCCACT---------------------- chr7B_1_TraesCS7B01G012200 -----------------ATATTCCCACT---------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CTATAATACATATTCTGATATTCCCACT---------------------- chr7A_850 -----------------ATATTCCCACT---------------------- chr7D_962 -----------------ATATT-ACACT---------------------- chr7A_965 -----------------ATACTCCCACT---------------------- chr7D_968 -----------------ATATT-ACACT---------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GACTTTCAGTTAGGAGTGAAGACTTTCAGTAGAAGTTGTTGAATCAAATC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -----------------ATGTTCACACT---------------------- chr7D_1773 -----------------ATCTTCG--CT---------------------- chr7B_1780 -----------------ATATTCACACT---------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 AGTACTTTGATGCTACTATGGACAGATTTAAAATCCAAACTAAACCTTGA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TATGGAAACTAGTGCTTTTGATGCTACTGTTCGTTGATTCAGATGATTCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 --------------------------------CTTGGAACTTGAAAACCC chr7B_1_TraesCS7B01G012200 --------------------------------CTTGGAACTTGAAAACCC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 --------------------------------CTTGGAACTTTAAAACCC chr7A_850 --------------------------------CTTGTTCAGCTTCA---- chr7D_962 --------------------------------CTTGGAACTTGAAAACC- chr7A_965 --------------------------------CTTGGAACTTGAAAACCC chr7D_968 --------------------------------CTTGGAACTTGAAAACC- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GTTCTTCAATTTAATACGATATATGCCGCTACCTTGGAATTTTAAAACCC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 --------------------------------CTAGGAACTTGAAAGAAA chr7D_1773 --------------------------------CTTGGAACTTGAAAGAAA chr7B_1780 --------------------------------CTTGGAACTTGAAAAAC- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----------------------AAATAAGTTCAGTCATAT--------- chr7B_1_TraesCS7B01G012200 -----------------------AAATAAGTTCAGTCATAT--------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -----------------------TAATCAGTTGAGTCATAT--------- chr7A_850 ------------------------------------CATAT--------- chr7D_962 ------------------------------------CAAAT--------- chr7A_965 -----------------------AAACCAGTTCAGTCATAT--------- chr7D_968 ------------------------------------CAAAT--------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -----------------------AAATCAGTTCAGTCTGCCTAGTTCAGC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 ATTGTAATTCAGAAAGAAAATTGTAATCAGTTCAGTCTTAT--------- chr7D_1773 ATTGTAATTCAGAAAGAAAATTGTAATCAGTTCAGTCTTAT--------- chr7B_1780 ------------------------------------CAAAT--------- SNPs ---------------------------S---------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TTCACAAAGATTTTTTTTCTAGCCTACTGTAACTGTTTCGAACTTTTGAT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 AATCTGTTTCAGACTTTCAGTTAGGAGTGTTAAGACTTGGAAATAGTCTG chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 AACTGCTGCTGGATTAAATCAGTAGGTGGTCAACAGGCATGACATTGTGC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CTGTTGGGTTTATGAACAGATGCATAAACTAATGGTTTTGATGCTAGTGT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TCTTTGACTCACATGATTCAGTTCTTCAGTTTAATACGATTACATTCAGT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----CAGTT--------------CAGCATGACATAGAAGATACTGATTT chr7B_1_TraesCS7B01G012200 -----CAGTT--------------CAGCATGACATAGAAGATACTGATTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -----CAGTT--------------CAGCTTCACATAGAAGATACTGATTT chr7A_850 -----CAGTT--------------CAGCTTCACATAGAAGATACTGATTT chr7D_962 -----TAGTT--------------TAGCTTCACATAGAAGATACTGATTT chr7A_965 -----CAGTT--------------CAGCTTCACATAGAAGATACTGATTT chr7D_968 -----TAGTT--------------TAGCTTCACATAGAAGATACTGATTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CTGCCTAGTT--------------CAGCTTCACAGAGAAGATAATGATTT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -----GAGTT--------------GAGCTTCACGTAGAAAATACTGATTT chr7D_1773 -----GAGTT--------------GAGCTTCACGTAGAAAATACTGATTT chr7B_1780 -----CAGTTAAGTCATATCAGTTGAGCTTCACATAGAAAATACTGATTT SNPs ----------------------------S-S------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CTACTTATATG-------------TGATTCAGC--------------AGA chr7B_1_TraesCS7B01G012200 CTACTTATATG-------------TGATTCAGC--------------AGA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CTA----TACG-------------GAATTCAG-AA------------A-G chr7A_850 CTACTTATATG-------------TAATTCAGC--------------A-A chr7D_962 CTA----TATG-------------TAATTCAG-AAAGAA--------A-A chr7A_965 CTA----TATG-------------TAATTCAGCAAAAAA--------A-A chr7D_968 CTA----TATG-------------TAATTCAG-AAAGAA--------A-A chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CCGTTC------TTTAGCCTACTGTAATTGTTTCGAGTAACGTGCGGA-C chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 CTA----TATGATTTAGAAAATTGTAATTCAG-AA------------A-G chr7D_1773 CTA----TATGATCTAGAAAATTGTAATTCAG-AA------------A-G chr7B_1780 CTA----TATGATTTAGCCAATTCTAATTCAG-AA------------A-G SNPs -------------------------S----------------------S- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 AAAAATCAGGT-----CGTATCCCACAACACTATATGGAAAAT--AGTTT chr7B_1_TraesCS7B01G012200 AAAAATCAGGT-----CGTATCCCACAACACTATATGGAAAAT--AGTTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 ------------------------------------------------TT chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 ------------------------------------------------TT chr3B_63 -------------------------------------------------- chr7B_850 AAAATTCAGGTAGCATTGTATCCCACAAGCCTACATGGAAATT--AGTTT chr7A_850 AAAAATCAGGT-----CCTATCCCACAACACTATATGGAAAAT--AGTTT chr7D_962 AAAAATCAGGT-----CGTATCCCACAGCACTACATGGGAAAT--AGTTT chr7A_965 AAAAATCAGGT-----CGTATCCCACAACAGTATATGGAAAAT--AGTTT chr7D_968 AAAAATCAGGT-----CGTATCCCACAACACTACATGGAAAAT--AGTTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 AAAATTCAGGT-----TCTATCCGACAGCACATTACATTGTTGTGAGGTT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 AAAATTCAGGC-----TGTATCCCACAACACTGCATGGAAATT--AGTTT chr7D_1773 AAAAATCAGGC-----TGTATACCACAACACTACATGGAAATT--AGTTT chr7B_1780 AAAATAGTTTCTGGG----------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CTGCA--------------GTTGCCTTCTTGATTTCGAAACTAGTAGTCT chr7B_1_TraesCS7B01G012200 CTGCA--------------GTTGCCTTCTTGATTTCGAAACTAGTAGTCT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 ATGAT--------------TTTGTCTATATAAATCGTAAAATCGTATTAT chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 ATGAT--------------TTTGTCTATACAAATCGTAAAAGCGTATTAT chr3B_63 -------------------------------------------------- chr7B_850 TTGCACATTACATACATCAATTGTCTTCTTGATTTCG-AACAAGTAGTCT chr7A_850 CTGCA--------------GTTGCCTTCTTGATTTCGAAACTAGTAGTCT chr7D_962 CTGCA--------------ATTGCCTTCTTGATTTCGAAACTAGTAGTCT chr7A_965 CTGCA--------------ATTGCCTTCTTGATTTCGAAACAAGTAGTCT chr7D_968 CTGCA--------------ATTGCCTTCTTGATTTCGAAACTAGTAGTCT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TTGTACATCAGCTTTCTTTTTTGTCTTCTGACTTAAACTTGTTGCAGTAT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 CTACATTGCC---------------------------------------- chr7D_1773 CTACATTGCC---------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GAATAACAGTTTTCTGAAACTTTGGGTGAAAC---TAGTC-------TGA chr7B_1_TraesCS7B01G012200 GAATAACAGTTTTCTGAAACTTTGGGTGAAAC---TAGTC-------TGA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 GACATGAGA----------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 GACATGAGA----------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GAAAAACAGTTTGCTGACACTTTGGGTGAAACTAGTAGTC-------TGA chr7A_850 GAAAAACAGTTTTCTGAAACTTTGGGTGAAAC---TAGTC-------TGA chr7D_962 GAAAAACAGTTTGCTGAAACTTTGGGTGAAAC---TAGTAGTCTGAATGA chr7A_965 GAAAAACAGTTTGCTGAAACTTTGGGTGAAACTAGTAGTC-------TGA chr7D_968 GAAAAACAGTTTGCTGAAACTTTGGGTGAAAC---AAGTACTCTGA---- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CTGTTT-------------------------C---AATTACTCTGA---- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 ACTGATGTAGGATTATTAAATATCAATAGAAGTTGTTGAACCAAATCAGT chr7B_1_TraesCS7B01G012200 ACTGATGTAGGATTATTAAATATCAATAGAAGTTGTTGAACCAAATCAGT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -----------------AGAAAGCATATTGTGACGGTGAACCCACGGAGT chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -----------------AGAAAGCGTATTATGACGGTGAACCCACGAAGT chr3B_63 -------------------------------------------------- chr7B_850 ACTGCTGTAGGATTAT-AGTAGATAT------------------------ chr7A_850 ACTGCTGTAGGATTATTAGATATCAATAGAAGTTGTTGAACCAAATCAAT chr7D_962 ATTGCTGTAGGATTAC-AGATATCAATAGAAGTTGTTGAACCAAATCAGT chr7A_965 AGTGCTGTAGGATTAC-AGATATCAATAGAAGTTGTTGAACCAAATCAGT chr7D_968 ACTGCTGTAGGAT------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ACT----------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ----S-------------S------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CAACAGGCACGACATTGTGCCTGTTGGATTTATGGACAGATGCTAGAAGG chr7B_1_TraesCS7B01G012200 CAACAGGCACGACATTGTGCCTGTTGGATTTATGGACAGATGCTAGAAGG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 CAATCCGTGC---------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 CAATCCGTGC---------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ------------CAATGTGCCTGTTAGATTTATGGACAGATTCTAGAAGG chr7A_850 CAAC-------------TGCCTGTTGGATTTATGGACAGATGTTAGAAGG chr7D_962 CAACAGGCACGACATTGTGCCTGTTGGATTTATCGACAGATGCTAGAAGG chr7A_965 CAACAGGCACGACATTGTGCCTGTTGGATTTATGGACAGATGCTAGAAGG chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 --------------------------------------------AGAAGG chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TTGCCTG----------------------------------------AAG chr7B_1_TraesCS7B01G012200 TTGCCTG----------------------------------------AAG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TTGTCTG----------------------------------------AAG chr7A_850 CTGTCTGA---------------------------------ACTCTGAAG chr7D_962 TTGTCTG----------------------------------------AAG chr7A_965 TTGTCTG----------------------------------------AAG chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TTGTTTGTTGAGTTGGAAATCATTTCATAAGTCAAAAATCCACACTGAAC chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ---S---------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 ATAGATATTGTTTGGTTTTGAATTCAGACGATTCTGTTCTTCGATTTAAT chr7B_1_TraesCS7B01G012200 ATAGATATTGTTTGGTTTTGAATTCAGACGATTCTGTTCTTCGATTTAAT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CTAGTTATTGTTTGGTTTTGAATTCAGGCGATTCAGTTCTTCAATTTAAT chr7A_850 CTTGTTATTGTTTGGTTTTGAATTTAGATGATTCAGTTCTT-AATTTAAT chr7D_962 ATAGTTATTGTTTGGTTTTGAATTCAGACGATTCTGTTCTTCAATTTAAT chr7A_965 ATAGTTATTGTTTTGTTTTGAATTCAGACGATTTATGGACAG-------- chr7D_968 ------------------------------------TTCTTCAATTTAAT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CTTTATATGGAAACTATTGGC--TTTGATGGTTTACTTCTTCAATTTTAT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ------------------------------------------S------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 AATATGTGCC--GCCAGTGGAAGACTTAGCAACCTGAAAACCCAAA-CCA chr7B_1_TraesCS7B01G012200 AATATGTGCC--GCCAGTGGAAGACTTAGCAACCTGAAAACCCAAA-CCA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 AATATATGCC--GCTAGTGGAAGACTTTGGAACCTGAAAACCCAAA-TCA chr7A_850 ACTATATGCC--ACTCTTGGAAGACTTCGCAACTTGAAAACCCAAA-TCA chr7D_962 AATATGTAGATTGCCAGTGGAAGACTTAGCAAACTGAAACCCCAAA-TCA chr7A_965 -----ATGCC--GCCAGTGGAGGACTTAGCAACCTGAAACCCC-AA-TCA chr7D_968 AATACGTAGATTGCCAGTGGAAGACTTAGCAAACTGAAACCCC-AAATCA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ACAATGTGCC--GCTAGTGTAAAACATCTGAACTTGAAAACCC-AAATCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----------------------------------------------S-- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 ACTACG-------------------------------------------- chr7B_1_TraesCS7B01G012200 ACTACG-------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ATTCAGCATGCTCATTTAAATTTCACAGAGAAGAGACCCATTTCTACA-T chr7A_850 -------------------------------------------------- chr7D_962 ACTACG-------------------------------------------- chr7A_965 ACTACG-------------------------------------------- chr7D_968 ACTACG-------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GTTCGGTCTGCCTAGTTCAGCTTCACATAAAAGTTACTGATTTCTGTTTT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TTAGTTTACAGTAATTGCTTGGAATAATGTGTGGACAAAATTCAGGCTGT chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TTAGCCTACTGTAACTGTTTCGAGGTACATTACA---------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----------------------TAGATTTTTCTAGGCATTCCATTGTTT chr7B_1_TraesCS7B01G012200 -----------------------TAGATTTTTCTAGGCATTCCATTGTTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 AACCCACATCACTATATGAAAGCTAGTTTTCTCTATGCATCACACTGTTT chr7A_850 -------------------------------------------------- chr7D_962 -----------------------TAGATTTTTCTAGGCATTCCATTGTTT chr7A_965 -----------------------TAGATTTTTCCAGGCATTCCATTGTTT chr7D_968 -----------------------TAGATTTTTCTAGGCATTCCATTGTTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -----------------------------------------------TTT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------T chr7D_1773 -------------------------------------------------T chr7B_1780 -------------------------------------------ATTGTTT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CGAGTTTTTATACCTCAGCTTTCTTCTTGATCTTTTCATCATACTGTTAG chr7B_1_TraesCS7B01G012200 CGAGTTTTTATACCTCAGCTTTCTTCTTGATCTTTTCATCATACTGTTAG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TGAGTTTTTGTACATCAGCTTTCTTCTTGGTCGTTTCATTA--------- chr7A_850 -------------------------------------------------- chr7D_962 CAAGTTTTTGTACCTCAGCTTTCTTCTTGATCTTTTCATCATACTGTTAG chr7A_965 CGAGTTTTTGTTCCTCAGCTTTCTTCTTGATCTTTTCATCATACTGTTAG chr7D_968 CGAGTTTTTGTACCTCAGCTTTCTTCTTGATCTTTTCATCATACTGTTAG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TGAGGTTTTGTACACCAGCTTTCTTTTTTGTCTTCTTAA---ACTTCTAG chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 TCAGGTTTTGTACATTAACTGTCTTCTTGATCTTGTTATTGACTCTGTTT chr7D_1773 TCAGGTTTTGTACATCAACTGTCTTCTTGATCTTGTTATTGACTCTGTTT chr7B_1780 TCAGGTTTTGTACATCAACTGTCTTCTTGATCTTGTTATTGACTCTGTTT SNPs ---------S---------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CAGTGCCTGT---------------------------------------- chr7B_1_TraesCS7B01G012200 CAGTGCCTGT---------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ----ACCTGT---------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 CAGTACCTGT---------------------------------------- chr7A_965 CAGTACCTGT---------------------------------------- chr7D_968 CAGTACCTGT---------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 CAGTACCTGT---------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 TAGCAA-------------------------------------------- chr7D_1773 TAGCAATATGAGAGTAAATTGCAAGAAACCACCACTTTGAAGGCTAGGTT chr7B_1780 TAGCAC-------------------------------------------- SNPs ----S--------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 ATCAGAAAACACTACGTTACATTTTTGTGACAGAAACCACCATGTCTACG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GTAATTGTTTTTCAAATAACACTGATTGGTGGATTAAAGCGCTTTAAGCA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 CGTTTATGACAGACGGGTCCCGGTCGTCAGGAGGTGACTTGGCAAAAACC chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GCCACCTGGGCACTTTGACTAGTCAAAATCGTCATGCGGACACTCTCTCT chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TTGACTGGTCACTCCTACTCTGCGCGTGGTGGCGCATCCGGTGACAGGGA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 CCGGCAGTGTAGAGCGGGCGGCGCGTTTGGCGACGGTGATCGAGGGTATA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GAGTGCAGCGACGCGTTCGACGACAGCAACCGAGGGTGTAGAGCGTGGCG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 AAGCATCCAGGATATCTCATTCATCGCACTAGGCGGCGGATGCCATGGAG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GCGGGGGCCAACGTGCTGCGCGAGTGCGACTGCCGGATATGCCATCCCCG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 CCGCAGAACTTCGAGCCGGAGGTCTGCTGGTCCGATGACAGTTTCTGCGA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GACGCTCCATGGCGAGAATCAGTCGGCCTTGGCGACGAACACGCGCGGCG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GCCACTGCTTGCCGTCGCGGCTGTTTTTACTTCTCAAGTACTTGAGCTGC chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 ACCTGCACTTCGTAGGACGTGACGGGGATGAGCTGCTATACTCCGGTGAC chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 CACCTCGCGGTCAACGACGACGCGTGCCAGGCAGCACCGATGCCGGAGCA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------GACATGATGTATGTCTAACTGCTTC chr7B_1_TraesCS7B01G012200 -------------------------GACATGATGTATGTCTAACTGCTTC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------GACATGATGTATGTCTAACTGCTTT chr7A_850 -------------------------------------------------- chr7D_962 -------------------------GACATGATGTATGTCTAACTGCTTC chr7A_965 -------------------------GACATGATGTATGTCTAACTGCTTC chr7D_968 -------------------------GACATGATGTATGTCTAACTGCTTC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------GACACCTG--ATGCCTAACTGCTTA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 AAGCTTGATAGCGCCTAGCCTCGACGACATGTCGTATGTGCGCCCGTCCG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 GA------------------------------------------------ chr7B_1_TraesCS7B01G012200 GA------------------------------------------------ chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 GA------------------------------------------------ chr7A_850 -------------------------------------------------- chr7D_962 GA------------------------------------------------ chr7A_965 GA------------------------------------------------ chr7D_968 GA------------------------------------------------ chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ACACTT-------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TCACCCCACCCTCCGCGCGCGTATTAGTCGCCGTTGGGCCTCCCCGCAGT chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TTGCCGCCGTCGTCGGGCGGGGAAGAGGAGAGAGGGCGGCGGCGGCTCGA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TCCAGATCGAGGTCGGCACGGCGAGGGCTCGATCCAGATCGAGGACGACA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 CGAAGGCGGCTCCAACCAGATCGAGGACGGTCCTGATCGAGGACGGCGCG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GCGGCGGCTCCATTCAGATCAAGGACGGCGCGGCAGTTGAGCGTCGCAGT chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TGGGCTCATCGCTGGTTGCCGGCGGGGGAGATAGAGGGCGACGGCGTGGG chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 AAGATGGAGGGAGACAGCGTGGGTAGGTGGAAGGGGATTTTGACTAGTCA chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 AAGTGCATAGGTGGCGTTTTTTGCCAAGTCACCTCCTGACGACTGGGACT chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 CTTCTGTCATAAACGTGCTTAAAGTGCTATAATCCGTCAATCAATGTTAT chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 TTGCAAAACAATTATCATAGATATGGTGGTTTCTGTCACAAAAATGTAAC chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 GTAGTGTTTCCTGATAACCTAGCCCTCAAAGTGGTGGTTTCTTGCAATTT chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 --------------------------------------TATTTCTGATAA chr7B_1_TraesCS7B01G012200 --------------------------------------TATTTCTGATAA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 --------------------------------------TGTTTCTGCTAA chr7A_850 -------------------------------------------------- chr7D_962 --------------------------------------TATTTCTGATAA chr7A_965 --------------------------------------TATTTCTGATAA chr7D_968 --------------------------------------TATTTCTGATAA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ----------------------------------------TTTCTGCTAA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 ---------TATGATGACCTTACCTCCTCACCGTTCCTTGTACATTCTAT chr7D_1773 ACTCAGCAATATGATGACCTTACCTCCTCACCGTTCCTTCTAAATTCTAT chr7B_1780 ---------TATGATGACCTTACCTCCTCACCGTTCCTTGTAAATTCTAT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 TTCAGCCCACGCGGAGGTGCGGTACCCGGATGTCGATGCAGTGTAGAGAA chr7B_1_TraesCS7B01G012200 TTCAGCCCACGCGGAGGTGCGGTACCCGGATGTCGATGCAGTGTAGAGAA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TTCAGCCCATGCGGAGGTGCGGTACGCGGATGTCGATGCATTGTAGAGAA chr7A_850 -------------------------------------------------- chr7D_962 TTCAGCCCATGCGGAGGTGCGGTACCCGGACGTGGATGCAGTGTAGAGAA chr7A_965 TTCAGCCCACGCGGAGGTGCGGTACCCGGATGTCGATGCAGTGTAGAGAA chr7D_968 TTCAGCCCACGCGGAGGTGCGGTACCCAGATGTCGATGCAGTGTAGAGAA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TTCAGCCCAGGCGGCACTGCGGTACGCGGATGTCGATGCATAACAGAAAG chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 TTCAGCCCACGCAGGGGTGCGGTACCCGGATGTCGATGCAGTGTAGAGAA chr7D_1773 TTCAGCCCACGCGGGGGTGCGGTACCCGGATGTCGATGCAGTGTAGAGAA chr7B_1780 TTCAGTCCACGCGGGGGTGCGGTACCCGGACGTCGATGCAGTGTAGAGAA SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -----AGACCAGAGCAGGACTCCTGACCGTCGCTTCACAGTTCACTTGTT chr7B_1_TraesCS7B01G012200 -----AGACCAGAGCAGGACTCCTGACCGTCGCTTCACAGTTCACTTGTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -----AGAACAGAGAAGGACTCCTGACTGCCGCTTCACAGATCAGTCCTT chr7A_850 -------------------------------------------------- chr7D_962 AGACCAGAGCAGAGCAGGACTCCTGACCGTCGCTTCACAGTTCACTTGTT chr7A_965 -----AGACCAGAGCAGGACTCCTGACCGTTGCTTCACACTTCACTTGTT chr7D_968 -----AGACCAGAGCAGGACTCCTGACCGTTGCTTCACAGTTCTCATGTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -----ATACCAGAGCCAGGGCCCCTAGAAGTCGCCTTCATGTCCACGTCG chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -----AGACCAGAGCAGGAGTCCTGACCGTCGCTTCACACTTCACTTGTT chr7D_1773 -----AGACCAGAGCAAGAGTCCTGACCGTCGCTTCACACTTCACTTGTT chr7B_1780 -----AGACCAG-------------ACCGTCGCTTCACAGTTCACTTGTT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 CAG--AGTGTCGCCGT--------CT------CAATAAT----------- chr7B_1_TraesCS7B01G012200 CAG--AGTGTCGCCGT--------CT------CAATAATTT--------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 CAG--AGTGTCGCGGCAGAAGTCACGTGAATCCAAACTTTT--------- chr7A_850 -------------------------------------------------- chr7D_962 CGG--AGTGTCGCCGT--------CT------CAAAACTTT--------- chr7A_965 CAG--AGTGTCGCCGT--------CGTGAATCCAAAACTTT--------- chr7D_968 CAG--AGTGTCGCCGT--------CT------CAAAACTTT--------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TCGGAAGTGTCGCCGC--------CTTGGACACGATGACATCAGAACTCA chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 CAG--AGTGTCGCCGT--------CATGAATCCAAAACTTT--------- chr7D_1773 CAG--AGTGTCGCCGT--------CGTGAATCCAAAACTTT--------- chr7B_1780 CAG--AGTGTCGCCGT--------CT------CAAAACATT--------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -----TTGCAGTGAGATAGGGGTTCGGCAAAACCCGGAAGTTGTTGTGTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -----TTGCACTGAGATAGTGGTTCAGGAAAACCCAGCAGTTGTCGTATT chr7A_850 -------------------------------------------------- chr7D_962 -----TTGCAGTGAGATAGGGGTTCAGCAAAACCCAGAAGTTGTTGTGTT chr7A_965 -----TTGCAGTGAGATAGGGGTTCGGCAAAACCAGCAACTTGTTGTGTT chr7D_968 -----TTGCAGTGAGATAGGGGTTCGGCAAAACCTGGAAGTTGTTGTGTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 GTTCCTTTCGTTGAGATATGGGTTCAGGAAAACCCAGCAGTTGTTGTGTT chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -----TTGCAGTGAGATAGGGGTTCGGCAAAACCCAGAAGTTGTTGTGTT chr7D_1773 -----TTGCAGTGAGATAGGGGTTCGGGAAAACCCAGAAGTTGTTGTGTT chr7B_1780 -----TTGCAGTGAGATAGGGGTTCGGCAAAACCCAGAAGTTGTTGTGTT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TCTGCTAG---CTAAACTTGGTCCCTTCTC-------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 TCTGCAACGTACTAAACTTGGTCCATTATC-------------------- chr7A_850 -------------------------------------------------- chr7D_962 TCTGCTAG---CTAAACTTGGTCCGTTCTC-------------------- chr7A_965 TCTGCTAG---CTAAACTTGGTCCGTTCTC-------------------- chr7D_968 TCTGCTAG---CTGACAATGTAGGAAACCTATTTGCTGTTCTCAAATTCA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TCTGCTAG---CTAAACTTGGTTTGTTCTC-------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 TGTACTTG---CTAAACTTGGTCCGTTCCC-------------------- chr7D_1773 TCTGCTAG---CTAAACTTGGTCCCTTCTC-------------------- chr7B_1780 TCTGCTAG---CTAAAGTTGGTCCCTTCTC-------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 ---------------------CTC-------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ---------------------CTG-------------------------- chr7A_850 -------------------------------------------------- chr7D_962 ---------------------CTGACAATGTAGGAAACCTGTTCTCAAAT chr7A_965 ---------------------CTG-------------------------- chr7D_968 GATATATACTGCTTGGTCTCGCTG-------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 ---------------------CTGACA----------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 ---------------------CGG-------------------------- chr7D_1773 ---------------------CTG-------------------------- chr7B_1780 ---------------------CTG-------------------------- SNPs -----------------------S-------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 ---------------------------ACAATGTAGGAAACCTATTTGCT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 ---------------------------ACA--GTAGAAAATCCATTT--- chr7A_850 -------------------------------------------------- chr7D_962 TCAGATATATACTGCTTGGTCTCGCTGACAATGTAGGAAACCTATTTGCT chr7A_965 ---------------------------ACAATGTAGGAAACCTATTTGCT chr7D_968 ---------------------------ACAATGTAGGAAACCTATTTGCT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 --------------------------------GTAGGAAACCTATTTGTG chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 ---------------------------ACAATGTAGGAAACCTATTTGCT chr7D_1773 ---------------------------ACAATGTAGGAAACCTATTTGCT chr7B_1780 ---------------------------ACAATGTAGTAAACCTATTTGCT SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 GTTCTCATATTCAGATATAT------------------------------ chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 GTTCTCAAATTCAGATATAT------------------------------ chr7A_965 GTTCTCAAATTCAGATATAT------------------------------ chr7D_968 GTTCTCAAATTCAGATATATACTGGCGTTCGGCGCGGGATCCGGCGGTGG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 TT------------------------------------------------ chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 GTTCTCAAATTCAGAAATTAACTGCT------------------------ chr7D_1773 GTTCTCAAATTCAGACATAT------------------------------ chr7B_1780 GTTCGCAAATTCAGATATTA------------------------------ SNPs -------S------------------------------------------ forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GCTGCGAAGGTGGAGCTCCTCTGCTCTGGTGCTGGACGGGCGGCGAGGCG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 AGGCTGGTGGCGATGCGTTGAGCTGCGGGCTGGGCGCGCGGTGGCCGCGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GGGATGCGGGCTGGGCCGGGCGAGCCCCAGCTGGATCTGCAGAGTGCCTA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 CCGCGGGGCGGGGTCGTGGTCAGCGCTGCGGCGGAGGAGAGGGGTCAGGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GGGAGCGAGCTGTTCGGCGGCGCATGGGCTCTTCATGCGCGTCGCCGGCC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GTCGGCTCCATGAGCTCCAGAGGGCGGTGTGAGGCAGATCGGGCGCAAGG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GGCTGGCGGTTATCCGGCGCGGACCAGCGGCAGCGATGGAGACCTGGGCC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 CCGGCGTCCGGATCTGGTGGCTGCGGCGGACGTTGGGCGCGTGGGGCCAG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 CGGCCGTCGGGCGTGTGTCTGCGGTGGTGGCCTGGCTCGGGTTGGTGGTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 ------------------GAAGACCT------------------------ chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GGAGGTGCAACGTCGGGTGAAGACCTTGCTGCCAGTCTTTGGGCTGGGGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 AGGCGACGGCGACGCCTGCGGGCGCCGCTTCCCTCTTGAAGGCGTCGCTG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 AGGCATTTCTGCTCGCTCCACCACGCAAGGCTGCTCGGGGGAAACCCTTG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 ATCCCATGGGATCGGACGATGAAGGCGATGTGTGTCGCGCCTCTTGGGGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 ATCGTTTCAGGAGCTCCTTACCGGCCAGGGGAATCAGTGATAGATGGGGG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 ATGTTGTTCGTGCTGCTTGGTCGTGTCCGGCGATGAGGGAGGTTTTGACT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 TCTGTGGCAACGATGACGGTGGTGAGCATTGTCGGAGGCGTGGCTTTGGT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 CATAGTAGTCGGCTCTTCTCCGGCGTGTCCGTGAGATTACACTGTTTGTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GCTGTGAAGTCGAAGCTGCGGTGCGGGGCTCTGGTAGCGTACGATGACGA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GCGACATGTGGTCCGTTCGGCGATCTCCTGTGACGCCAACCTTGTTTTGT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 TCTCCGTAGTTTCTCCGCCGGAGTCGGAGCTACGTTGTCTTGCGGTGGGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 GGATGGCATTCCGTCTTGTAAGTGTAGTGTTGTTCTGCAGCTAATAGGGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 TGCCTTTTCTTTTTTCCTTTGATCTTCGGATCCTCCTCATGTTGTTTCTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -------------------------------------------------- chr7A_965 -------------------------------------------------- chr7D_968 CCGTTGCTTTCTGCTAAATCTAATTGAAGCCAGCAATTTGCTGGATCTTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -----------------------------ACTGCTTGGTCCCTTCTCCTG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 -----------------------------ACTGCTTGGTCCGTTCTCTTG chr7A_965 -----------------------------ACTGCTTGGTCAGTTCTCCTG chr7D_968 CAAAAAAAATAAAAAAAATTCAGATATATACTGCTTGGTCCGTTCTCTTG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -----------------------------ACTGCTTG------------- chr7B_1780 -----------------------------AGTGCTTG------------- SNPs -----------------------------------------S-------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 ACAATGTAGGAAACCTATTTTGTGTTGGTCTCGCTGTTCTAAAATTCAGA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 ACAATATATTGAACCTATTTTGGGTTGGTCTCGCTGTTCTAATATTCAGA chr7A_965 ACAATGTAGGAAACCTATTTTGTGTTGGTCTCACTGTTCTAAAATTCAGA chr7D_968 ACAATGTATGAAACCTATTTTGTGTTGGTCTCGCTGTTCTAAAATTCAGA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AAAAGCTTGAACAATGATGCTCGTAATATTTGTGCTGCTATTCTGTTTCC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 AAAAGCTTGAACAATGATGCTCGTAATATTTGTGCTGCTATTCTGTTTCC chr7A_965 AAAAGCTTGAACAATGATGCTCGTAATATTTGTGCTGCTATTCTGTTTCC chr7D_968 AAAAGCTTGAACAATGATGCTCGTAATATTTGTGCTGCTATTCTGTTTCC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AGCTGCTCCACCGACTGCCGAGGCGGAACACTAGTTGTACTTGCGCGGTA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 AGCTGCTCCACCGACTGCCGAGGCGG----------------------TA chr7A_965 AGCTGCTCCACCGACTGCCGAGGCGG----------------------TA chr7D_968 AGCTGCTCCACCGACTGCCGAGGCGG----------------------TA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs --------------------------SSSSSSSSSSSSSSSSSSSSSS-- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -----------------------------ACTAGTTGTACTTGCGCGGT- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 ATAGTTTTGCAGTGAATGGAGGAATTGAGTTCAGATGTGCCGCTTAAAGC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 ATAGTTTTGCAGTGAATGGAGGAATTGAGTTCAGATGTGCCGCTTAAAGC chr7A_965 ATAGTTTTGCAGTGAATGGAGGAATTGAGTTCAGATGTGCCGCTTAACGC chr7D_968 ATAGTTTTGCGGTGAATGGAGTAATTGAGTTCCGATGTGCCGCTTAAAGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TTCAGTCCTATAGCAAAGAATGAATTTGTGTTTGGACAGAGAACTCTCAA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TTCAGTCCTATAGCAAAGAATGAATTTGTGTTTGGACAGAGAACTCTCAA chr7A_965 TTCAGTCCTATAGCAAAGAATGAATTTGTGTTTGGACAGAGAACTCTCAA chr7D_968 TTCAGTCCTATAGCAAAGAATGAATTTGTGTTTGGACAGAGAACTCTCAA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TGGTGGTTGTCGCTCATG-----------------------------GTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 CGGTGGTTGTCACTCATGTTTTTTTTTTACTATGATTGTCACTCATGGTT chr7A_965 CGGTGGTTGTCACTCATG-----------------------------GTT chr7D_968 CGGTGGTTGTCACTCATG-----------------------------GTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs S----------S-------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AGTTAAC--------------------------CCATTTATAATTTTTTG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 ------------------------------------TTTATTATTA---- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 ------------------------------------TTTATTATTA---- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 AGTTAAC--------------------------CCATTTATTATTTTTTG chr7A_965 TTTTTTGACTATGATTGTCACTCATGGTTAGTTACATTTATTATTTTTTG chr7D_968 AGTTAAC--------------------------ACATTTATTATTTTTTG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----------------------------------------S-------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 GTTATGTGCATTCAGGCCGAAACCTCAGAACGGTTTTTGTTTGGGGGAAC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 GTTATGTGCATTCAGGCCAAAACCTCAGAACCGTTTTTGTTTGGGGGAAC chr7A_965 GTTATGTGCATTCAGGCCGAAACCTCAGAACGGTTTTTGTTTGGGGGAAC chr7D_968 GTTATGTGCATTCAGGCCGAAACCTCAGAACGGTTTTTGTTTGGGGGAAC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TGAGATTAGTTTGCAGTACAGTAGGGACCTCCTTTATTTATTTTCCTTTT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TGAGATTACTTTGCAGTACAGTAGGGACCTCCTTTATTTATTTTTCTTTG chr7A_965 TGAGATTAGTTTGCAGTACAGTAGGGACCTCCTTTATTTATTTTTCTTTT chr7D_968 TGAAATTAGTTTGCAGTACAGTAGGGACCTCCTTTATTTATTTTCC-TTT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TCACCTTTTTCGTTTTTATTTTCTGTTTTCAACTATTT--TCTTCTAGAT chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TCACTTTTTTCGTTTTTATTTTCTGTTTTCAATT-TTTCTTCTTCTAGAT chr7A_965 TCACC-TTTTCGTTTTTATTTTCTGTTTTCAATT-TTT--TTTTCTAGAT chr7D_968 TCACCTTTTTAGTTTTTATTTTCTGTTTTCAATT-TTT--TTTTCTAGAT chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs --------------------------------S-S--------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TTCCTTTCAGTATTTCAAAATAGTTATGA--------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TTCCTTTCAGTATTTCAAAATAGTTATGAATTTAAAAAATGCTTCAAATA chr7A_965 TTCCTTTCAGTATTTCAAAATAGTTATTA--------------------- chr7D_968 TTCGTTTCAGTGTTTCAAAATAATTATAA--------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TTTAAAACAGTTCAAGTTTCAATTTTTTTTGACTATGATTGTCACTCATG chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 GTTAGTTAACCTATTTATTATTTTTTGGTTATGTGCATTCAGGCCAAAAC chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 CTCATAACGGTTTTTGTTTGGGGGAACTGGGATTACTTTGCAGTACAGTA chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 GGGACCTCCTTTATTTATTTTTCTTTGTCACTTTTTTCGTTTTTATTTTC chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -------------------------------------------------- chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TGTTTTCAATTTTTCTTCTTCTAGATTTCCTTTCAGTATTTCAAAATAGT chr7A_965 -------------------------------------------------- chr7D_968 -------------------------------------------------- chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 -----ATTTAAAAAATGTTTCAAATATTTAAAACAGTTCAAGTTTAAAAA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TATGAATTTAAAAAATGCTTCAAATATTTAAAACAGTTCAAGTTTCAAAA chr7A_965 -----ATTTAAAAAATGTTTCAAATATCTGAAACATTTCAAGTTTCAAAA chr7D_968 -----ATTTAATATTTTTTTTAATA--TTTAAAGAGTTCAAGTTTCAAAA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs ---------------------------------------------S---- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AATGTTCACAAATTTCAAAGTTATTCCCGGATCTT-AAAAAAAATTCACG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 AATGTTCACAAATTTTGAAATTATTCCCGGATCTT-AAAAAATGTTCATG chr7A_965 AATGTTCACAAATTTCAAAATTATTCCCAGATCTTAAAAAAATGTTCACG chr7D_968 AATGTTCACAAATTTTGAAATTATTCCCGGACCTT-AAAAAATGTTCACG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------S----------------------SS------ forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 AACTTGAAAATTGTTCACATATTTG-AAATGTTCCAAAATTAAAAAAGGA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 AACTTGAAAATTATTCACATATTTG-AAATGTTCCAAAATTCAAAAAGGA chr7A_965 AACTTGAAAATTGTTCACATATTTGAAAATGTTCCAAAATT-AAAAAGGA chr7D_968 AACTTTAAATTTTTTCACATATTTGAAAATGTTCCAAAATTCAAAAAGGA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----------------------------------------S-------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TCATGAATTTGAATTTTTCATGAATTCAAAAAG-GGTCCATAAAAAGATG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TCATGAATTTGAATTTTTCGTGAATTCAAAAAAAGGTTCATAAAAAGATG chr7A_965 TCATGAATTTGAATTTTTTGTGAATTCAAAAAAATGTTCATAAAAAGATG chr7D_968 TCATGAATTTAATTTTTTTCGTGAATTCAAAAAAGGTTCATAAAAAGATG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------S------------S----S------------ forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TTCATGAATTTAAAATTATGTTCCCAATTTTGTTTTGCAAAGCTATATTG chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TTCATGAATTTAAAATTTTGTTCCCAATTTTTTTTTGCAAAGCTATATTG chr7A_965 TTCATGAATTTAAATTTTTGTTCCCAA--TTTTTTTGCAAAGCTATATTG chr7D_968 TTCATGAATTT-----------CCCAATTTTTTTTCGCAAAGCTATATTG chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -----------------S-------------S------------------ forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 TTGGGTTCACATGAGCTCGGGATCAAAACAGTCGTGTCCGTTTCTGCACA chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 TTGGGTTCACATGAGCTCGGGATCAAAACAGTCGTGTCCGTTTCTGCACA chr7A_965 TTGGG----------------ATCAAAACAGTTGTGTCCGTTTCTGCACA chr7D_968 TTGGGTTCACACGAGCTCAGGATCAAAACAGTCATGTCCATTTCTGCACA chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 -------------------------------------------------- chr7B_1_TraesCS7B01G012200 CTATATCGTCCCCGGAAAGAGTGGATCGCCCGCACAGGCGGAAAGGAGGC chr6D_1 -------------------------------------------------- chr6A_1 -------------------------------------------------- chr2A_1 -------------------------------------------------- chr3D_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr5A_1 -------------------------------------------------- chr4D_1 -------------------------------------------------- chr3A_1 -------------------------------------------------- chr3B_63 -------------------------------------------------- chr7B_850 -------------------------------------------------- chr7A_850 -------------------------------------------------- chr7D_962 CTATATCGTCCCCGGAAAGAGTGGATCGCCCGCACTGGCGGAAAGGAGGC chr7A_965 CTATATCGTCCTCGGAAAGAGTGGATCGCCTGCACAGGCGGAAAGGAGGC chr7D_968 CTATATCGTCACCGGAAAGAGTGGATCACCTGCACAGGCGGAAAGGAGGC chr7D_997 -------------------------------------------------- chr7D_1018 -------------------------------------------------- chr7A_1019 -------------------------------------------------- chr7B_1041 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr7B_1045 -------------------------------------------------- chr2B_1045 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1050 -------------------------------------------------- chr7D_1080 -------------------------------------------------- chr7B_1181 -------------------------------------------------- chr7A_1773 -------------------------------------------------- chr7D_1773 -------------------------------------------------- chr7B_1780 -------------------------------------------------- SNPs -------------------------------------------------- forward_1880 -------------------------------------------------- reverse_3177 -------------------------------------------------- forward_1922 -------------------------------------------------- reverse_3310 -------------------------------------------------- forward_1923 -------------------------------------------------- reverse_3945 -------------------------------------------------- forward_3055 -------------------------------------------------- reverse_8330 -------------------------------------------------- input_sequence_40203 --------------------------------------------- chr7B_1_TraesCS7B01G012200 GAGTGGGGCTTCCCTTTGTGTGTTGCCGGCGCTGCCGCTGGTTCC chr6D_1 --------------------------------------------- chr6A_1 --------------------------------------------- chr2A_1 --------------------------------------------- chr3D_1 --------------------------------------------- chr5A_1 --------------------------------------------- chr5A_1 --------------------------------------------- chr4D_1 --------------------------------------------- chr3A_1 --------------------------------------------- chr3B_63 --------------------------------------------- chr7B_850 --------------------------------------------- chr7A_850 --------------------------------------------- chr7D_962 GAGTGGGGCTTCCTTTTGTGTGCTGCCGGCGCTGCCGCTGGTTCC chr7A_965 GAGTGGGGCTTCCTTTTGTGTGCCGCCAGCGCTGCTGCTGGTTCC chr7D_968 GAGTGGGGCTTCCCTTTGTGTGCCGCCGGCGCTGCCGCTGGTTCC chr7D_997 --------------------------------------------- chr7D_1018 --------------------------------------------- chr7A_1019 --------------------------------------------- chr7B_1041 --------------------------------------------- chr7B_1045 --------------------------------------------- chr7B_1045 --------------------------------------------- chr2B_1045 --------------------------------------------- chr7D_1050 --------------------------------------------- chr7D_1050 --------------------------------------------- chr7D_1050 --------------------------------------------- chr7D_1080 --------------------------------------------- chr7B_1181 --------------------------------------------- chr7A_1773 --------------------------------------------- chr7D_1773 --------------------------------------------- chr7B_1780 --------------------------------------------- SNPs ----------------------S---------------------- forward_1880 --------------------------------------------- reverse_3177 --------------------------------------------- forward_1922 --------------------------------------------- reverse_3310 --------------------------------------------- forward_1923 --------------------------------------------- reverse_3945 --------------------------------------------- forward_3055 --------------------------------------------- reverse_8330 ---------------------------------------------