>input_sequence_40191
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------ATGGACTCCGTGGAGAGGTCCAGGAGGA
GGGCGCAGCGATGGAGTAAGCGCAAGGCCGCCGTCGTCCACCTCGCCGTCTGCTTCGTCGTCGGCGCCTTCGCACCGCTG
GTCGCCACCCGCGGCCCGTTGATCGACGGCATCCGCGCCTCGTTTCTTCCGTTTGGCGGTGTTCAGCGAGTGGCTCCGCC
GTCGGCCCCTGCTGCCCCCGACATCGGCCTCCTGCTGATCGTCACCGTCACACGGCCGGACGACGACGTTGTGTCGCAGG
AGGCGTCGCTGACAAGGCTTGGGCACACGCTGCGGCTCGTCCCGCCGCCGTTGCTATGGATCGTGGTTGGGGCCGAGAAC
AGGTCGGCGTCAACGGTCCAGGTGCTCCGCGGCACCGGCGTCATGTTCCGGCATCTCACCTACGCCGTCGGCCAGAACAA
CGCCACCAACATCACCACCGCCGTGAACAACGCCACCACCGACATCACCGTGAAAGCCAGAGCCACCACCGCCGTGAACA
CCACCAC---CAACATCACCATGGAAGCCAGCGCCACCACCGCCGTGAACACCACCACCAACATCACCGTGGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACGCCACC
AACAACATCACCGTGGAAGCCATCGCC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ACCACCGCCGTAAACAACACCACCACCATGGAAGCCA
GCGCCTCCACCACCATGAACAATGCCACCACCAACACCGTGGAAGCCAGCACCAGCAACACAACCACCGCCGCCGAGAAG
AACGGCACCAACAACACCATTGTCGAGGACAC---------------CACCA------GCAGCGCCAGCAACACCACCAT
CACCGCCGAGAAGAACGGCGCCAACGACACCATCATCGAGAACAACACCACCGGGAATGTCAATGACGAAGCGGACCTGA
AGAAGAACGTGGCGCTGAGCCACATCGAGCGGCACCGGCTGGCCGGGGTTGTCCACTTCGCCGCCGCCTCTGCCATATAC
GACCTCGAGTTCTTTGAAGAGCTCAGGCAGACTCGGTGCGTCCTGCTTCTTCCTTCTCTTGCAGCTTTGCAACATCTTTT
TTTCCCTTTGCCAATTTTTTTA--CCAACACAAGAGCAACATAATAACATCACTTGTGCAATCCCTGATCCAGGGGCGTT
GCAGCATGGCCAACGGCAACTGTGTCATCAGCAGAGCAGAGAGTAACAGTGCAAGGACCAACCTGCAACTCATCACAGAT
AACAGGCTGGTACTCCAAGGACTCGGGCACCAATGAGACACATAGAGAGTCTGTT------GCTGCTGCACAAGATACAG
GTGCAATCCACAACATCTCCAGTTCACCTCCTGCAATAGAGACATCTGGACTTGGGTTCAGGAGCTCAATACTGTGG---
---GAATCAGAATGGTTCGTCAACAGCAAC---------------AGCTCTCAGGACTTCATCCAGCTTGTACGAGAAAT
GGCGGTCGGCGACGGGGACGAGCGGAAGGGCATCCCTTCTAACTGCTCCGAGTCACGGATAATGCTGTGGCACCTTGACA
TGCCAAAGCACACTCCAGAAGTTGAAGAACAGGAGACTCCACAGGAGCAAAGTCCATTGGAGGAAGACGAAGAGGACTAT
ATGACTTGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr3A_1_TraesCS3A01G309600
TGATTCTAAAAAACTTGTTTCATATCTGATTATCTCGTTGAATTTGAACTATTGTTGTGCTAGAGATATTTGAATGAATG
AATCGTGCTATTTCTATAATTACTTTGAGTGTTACGGGTTATTTTCTATAAGCTATGTCCAAACTTTACTGAATTCCGTT
GTGTTTGCATGAATCCTGTCCGGTTTGTTGAAATCCACTTTGAAATATGTGCGGGGGAAGGTTGAGTGGCTTGCTTCCGC
ATTCGTGTCCACGGACTGGAGGTGTATGGGTCAGCGTTAGAGGCGGAAAAATATCAGGTGATATCGAGGTTTAGGTGATA
CCATCATGCGGGCTCATGATAGCCATTGGATCTCGGATCTGACGGCTCCAGGTACAAGAGCTCCTCACGTACTCTATCTT
TCAATCTCGTATCACGGTATCACTTGAGCTTATCACCTGAAACTTTCGCGCGACTCCATCACCGAGGCGTCCGAGCACCG
GCACGACTTTGGAGAACTGATTTTACCACAGAACTGCCAGATGTGCTCCAGAGACGGTGCAACAGATGGCACATTTCTGC
TGTTCTGCTTCGCAACTCCGATGCGTTGTACACTACTATTGTTGTTTCGTTCCATTGTTGTTTCTGCAATTTCCGTTGAC
TGCCACTAAGTAATGTGCA---------TAGGGACACGCTGCTAATTTGGCAGCTCAGAAGAGCTCAGGATACTACTTAG
ACGTGCACCGACAGTCTTTTTGCATCGCACTTTGAGAGGGTTGACGTTCGAAAAC--ATATCGGAATTGTCAAATACAGT
CGTGCTAGCAAGTCGCAGCAGTAGTTGGCAAGTCAACCA-TGCCAGCACCGAATTCCTCCTCTGTCCTTTATAGGCCAAG
CTCAGCGTCTCCTCCGTTCAACCAGATTCAATCCGGCGATCTCAGAGCTCTCCTGCTTCCATCTATCTGAAGAAGTTCAG
GCGAGAGCAGCAGAGCAGCTAGGGAGAGGAGAAGCAGCAGAAGTAGCTGGGGATGGACTCCGTGGAGAGGTCCAGGAGGA
GGGCGCAGCGATGGAGTAAGCGCAAGGCCGCCGTCGTCCACCTCGCCGTCTGCTTCGTCGTCGGCGCCTTCGCACCGCTG
GTCGCCACCCGCGGCCCGTTGATCGACGGCATCCGCGCCTCGTTTCTTCCGTTTGGCGGTGTTCAGCGAGTGGCTCCGCC
GTCGGCCCCTGCTGCCCCCGACATCGGCCTCCTGCTGATCGTCACCGTCACACGGCCGGACGACGACGTTGTGTCGCAGG
AGGCGTCGCTGACAAGGCTTGGGCACACGCTGCGGCTCGTCCCGCCGCCGTTGCTATGGATCGTGGTTGGGGCCGAGAAC
AGGTCGGCGTCAACGGTCCAGGTGCTCCGCGGCACCGGCGTCATGTTCCGGCATCTCACCTACGCCGTCGGCCAGAACAA
CGCCACCAACATCACCACCGCCGTGAACAACGCCACCACCGACATCACCGTGAAAGCCAGAGCCACCACCGCCGTGAACA
CCACCAC---CAACATCACCATGGAAGCCAGCGCCACCACCGCCGTGAACACCACCACCAACATCACCGTGGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACGCCACC
AACAACATCACCGTGGAAGCCATCGCC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ACCACCGCCGTAAACAACACCACCACCATGGAAGCCA
GCGCCTCCACCACCATGAACAATGCCACCACCAACACCGTGGAAGCCAGCACCAGCAACACAACCACCGCCGCCGAGAAG
AACGGCACCAACAACACCATTGTCGAGGACAC---------------CACCA------GCAGCGCCAGCAACACCACCAT
CACCGCCGAGAAGAACGGCGCCAACGACACCATCATCGAGAACAACACCACCGGGAATGTCAATGACGAAGCGGACCTGA
AGAAGAACGTGGCGCTGAGCCACATCGAGCGGCACCGGCTGGCCGGGGTTGTCCACTTCGCCGCCGCCTCTGCCATATAC
GACCTCGAGTTCTTTGAAGAGCTCAGGCAGACTCGGTGCGTCCTGCTTCTTCCTTCTCTTGCAGCTTTGCAACATCTTTT
TTTCCCTTTGCCAATTTTTTTA--CCAACACAAGAGCAACATAATAACATCACTTGTGCAATCCCTGATCCAGGGGCGTT
GCAGCATGGCCAACGGCAACTGTGTCATCAGCAGAGCAGAGAGTAACAGTGCAAGGACCAACCTGCAACTCATCACAGAT
AACAGGCTGGTACTCCAAGGACTCGGGCACCAATGAGACACATAGAGAGTCTGTT------GCTGCTGCACAAGATACAG
GTGCAATCCACAACATCTCCAGTTCACCTCCTGCAATAGAGACATCTGGACTTGGGTTCAGGAGCTCAATACTGTGG---
---GAATCAGAATGGTTCGTCAACAGCAAC---------------AGCTCTCAGGACTTCATCCAGCTTGTACGAGAAAT
GGCGGTCGGCGACGGGGACGAGCGGAAGGGCATCCCTTCTAACTGCTCCGAGTCACGGATAATGCTGTGGCACCTTGACA
TGCCAAAGCACACTCCAGAAGTTGAAGAACAGGAGACTCCACAGGAGCAAAGTCCATTGGAGGAAGACGAAGAGGACTAT
ATGACTTGATATTGCGAGCTAGAGAAGAACCATATTGCAGTACAGCTATATAGATAGAGTAGATAGATGAACAAATGTTA
TGCAAAACTCAACACAGGCCAACCTCATGTAGTACATCATTTATTCCTTAACC-AGCACAACTTTGGTCTTGGAAGTGTC
AAACAGTCAAAGAACCTGCTACGTCTAAGACATCTAATGTTCTTTCTCCAGAAATTTCAGTGATACACCAAGGCTTTTGT
CTGCCTTCTAGTTCTAGGTGCAGAGACTGGAGGTGCAAAAATAATAGTATCTTCATTGGGTGAGCACATTTTGCATGATA
TATGATCAAAAGGCTGAACCACCTCCTTTAGTTTTCCCCAGCAAAACATCTTTTGCCTCGTTGATCTTCGACGCAAGGTA
ATGGCTTCCTCCTGCATCTGGGTGATTGGCAACCATGACCCTCTTGTGTGCCTCTTTCACCTTATCAGGACGGACATTTT
CCCTGGAGGAATCAAAAGGAAACATGGCAACTTAACAATGATGATAAGACACACAAAACACATCTCAAATCATAAATCGC
AAACAAAATTGTTGAGTCACAAGTAACTGGCACTTATTAAAATGTCAGAATGACCAGTCTGGCATGCCAAGATGCATATA
AA-TTAGAAGGAAAAAGATGAAGACCTAATTCCACATGTTGGTCATA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TAAGTACAGGGGGCACTATGAACAAAAAAAGATAGCA
GGTCAATAATTGATAACTCCTCCTTCATGAGCTCAACAGTTTGTTTTTAATCAACTGGGTT------TTTCTGGCGATGT
GCAGAAAATTCAGAAGGACAGGCCTGAGGCAGTGGTGAAG---TACTCCCCACTTGTGCCAAGAGGTCCTGGGTTCGACG
CAGCCTCTGTGTATTGAACTTTGCAGGAGTATGGTCCTGGGTTCGACGCAGCCTCGTATAATCCTTCCCCAGACCCTACC
TGGTGTGGGAGCTTCTAGCAATGGGTCTGTCTTTTCTTTTTTATATGTAGAGAAAA
>chr3D_597
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TATTGTTCTTTCGTTGCAATATATTGTTTGCAATTTCCGTTGAC
TGCCACTAAGGCACTAAGCAATGTGCTTTAGGGACACGCTGCTAATTTGGCAGCTCAGACAGAGGA--------ACTTAG
AAATGCACCGACAGTCTTCTTGCATTGCACTTTGAGAGGGTTGACGTTCCAAAAAAAATATCGGAATTGTCAAATACAGT
CGTGCTAGCAAGTCGCAGCAGCAGTTGGCAAGTCAACCAATGCCAGCACCGAATTCCTCCTCTCCCCTTTATAAACCAAG
CTCAGCGTCTCCTCCGTTCAACCAGATTCAATCCGGCGATCTCAGAGCTCTCCTGCTTCCATCTATCTGAAGAAGTTCAG
GCGAGAGTAGCAGAGCAGCTAGGGAGAGGAGAAGCAGCAGCGGTAGCTAGGGATGGACTCCGCCGAGAGGTCCAGGAAGA
GGGCGCAGCGATGGAGCAAGCGCAAGGCCGTCGTCGTCCACCTCGCCGTCTGCTTCGTCGTCGGCGCCTTGGCGCCACTG
GCCGCCACCCGCGGCCCGGGCATCCGTGA------------------------TGGCGGTGTTCAGCGAGTGGCTCCGCC
GTCGCCCCCTGCTGCCCCTGACATTGGCCTCCTGCTGATCGTCACCGTGACAAGGCCGGACGAGGACGGCATGTTGCAGG
AGGCGTCGCTGACGAGGCTCGGGCACACGCTGCGGCTCGTCCCGCCGCCGTTGCTATGGATCGTGGTTGGTGCCGAGAAC
AGGTCGGCGTCGACGGTCCAGGTGCTGCGGGGCACCGGCGTCATGTTCCGGCATCTCACCTACGCCGTCGACGAGAACAA
CGCCACCAACATCACCACCGCCGTGAACAATGCCACCAACAACAGCACCGTGGAAGCCAGCGCCACCACCGCCGTGAACA
ACTTCACCAACAACAGCACCATGGAAGCCAGCGCCACCATCGCCGTGAAC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AACGCCACC
AACAACAACACCGTGGAAGCCAGCGCCGCCGCCACCACCATCGCCGAGAAGAACGGTACCAACAACACCATTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACACCATTGTCGAGAACAACACCACAAACAA--------
-------------------------------CAACACCGTGGAAGCCAGCGCCACCAACACCACCGACACCGCCGAGAAG
AACGGCACCAACAACAGCATTGTCAAGAATAACGCCACCAACAACAACACCGTGGAAGCCAGCGCCACCAACACCACCAC
CGCCGCCGAGAAGAACGGCACCAACAACACCATCGTCGAGAACAACACCACTGGGAATGCCGGTGACGAAGGAGACCTGA
AGAGGAACGTGGCGCTGAGCCACATCGAGCGGCACCGGCTGGCCGGGGTCGTCCACTTCGCCGCCACCTCTGCCATATAT
GACCTCCGGTTCTTTGAAGAGCTCAGGCAGACTCGGTGCGTCCTGCTTTC-CCTTCTCTTGCAGCTTTGCAACATGTTTC
TTTCCATTTTGCGAATTTTGTCACCCAGCACAAGAGCAACATAATAACATCACTTGTGCAATTCTTGATCCAGGGGCGTT
GCAGCATGGCCAACGGCAACTGTGTCATCAGCAGACCAGAGAGTAACACTACAAGGACCAACCTGTAACTCATCACAGAT
AACAGGCTGGTACTCCGAGGACTCAGGAATCAATGCAACAGCGACACATACAACAGATGCGGCTGCTGCACAAGATACAG
GCGCAATCCGCAACAGCTCCTGTTTACCTCCTGAAATAAGCATATCTGGACTTGGGTTCAGGAGCTCAATACTCTGG---
---GAAT------GGTTCATCAACAGCAACATCTCTTCAGGAGGCAGCTCTCAGGACTACATCCAGCTTGTACGACAAAT
GGCAGTCGGCGACGAGGACGGGTGGAAGGGCATCCCTTCTGACTGCTCCGAGTCACGGATAATGATGTGGCACCTTGAAA
TGCCAAAGCACACTCCAGAAGTTGAAGAACAGGAGACTCCACGAGAGCAAAGTCTATTGGAGGAAGACGAAGAGGACTAT
ATGAATTGATATTGCGAGCTAGAGAAGAACCATATTGCAGTACAGCTATATCAATAGAGTAGATAGATGAACAAATGTCA
CGCAAAACTCAACACG---------CATGTAGTACATCATTTATTCCTTAACCCAGCACAACTTTGGTCTTGGAAGTGTC
AAACAGTCAAAGAACCTGCTACGTCTAAGACATCTAATGTTCTTTCTCCAGAAATTTCAGTGATACACCAAGGCTTTTGT
CTGCCTTCTAGTTCTAGGTGCAGAGTCTGGAGGTGCAAAAATAATAGTATCTTCATCCGGTGAGCACATTTTGCATGATA
TATGATCAAAAGGCTGAACCACCTCCTTTAGTTTTCCCCAGCAAAACATCTTTTGCCTCGTTGATCTTCGACGCAAGGTA
ATGGCTTCCTCCTGCATCCGGGTGATTGGCAACCATGACCCTCTTGTGTGCCTCTTTCACCTTATCAGGACGGACGTTTT
CCCTGAAGGAATCAAAAGGAAACATGGCAACTTAACAATGATGATAAGACACACAAAACACGTCTCAAATCATAAATCAC
AAACAAAATTGTTGAATCACAAGTAAATGGCACTTATTCAAATGTCAGAATGACCAGTCTGGCATGCCAAGATGCATATA
AATTTAGAAGGAAAAAGATGAAGACCTAATTCTACATGTTGGTCATA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TAAGTACAGGGGACACTATCAACGAAAAAAGATAGCA
GGTCAATAATTGATAACTCCTCCTTCATGAGCTCAACAGTTTGTTTTTAATCAACTGAGTAAATATCTTTCTGGCGACGT
GCAGAAAATTCAGAAGGACAGGCCTGAGGCAGAGGTGAAG---TACTCAGCACTTGTGCCAAGAGGTTCTGGGTTCGACG
CAGCCTCGCTGCATTGGACTTTGCAGGAGTATGGTCCTGGGTTTGACGCAGCCTCGTATAATCCTTCCCCAGACCCTACC
TGGTGTAGGAGCTTCTAGCAATGGGTCTTTCTTTTCTTTTTTATATGTACAGAAAA
>chr3B_597
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TATTGTTCTTTCGTTGCAATACCGTTTGTGCAATTTCCGTTGAC
TGCCACTAAGGCACAAAGCAATGTGCTTTAGGGGCACGCTGCTAATTTGGCAGCTCAGACAGAGGA--------ACTTAG
AAATGCACCGACAGTCTTCTTGCGTTGCACTTTGAGAGGGTTGACGTTCCAAAAAA-ATATCGGAATTGTCAAATACAGT
CGTGCTAGCAAGTCGCAACAGCAGTTGGCAAGTCAACCA-TGCCAGCACCGAATTCCTCCTCTCCCCTTTATAAGCCAAG
CTCAGCGTCTCCTCCGTTCAACCAGATTCAGTCCGGCGATCTCAGAGCTCCCCTGCTTCCATCTATCTGAAGAAGTTCAG
GCGAGAGCAGG--------TAGGGAGAAGAGAAGAAGCAGCGGTAGCTGGGGATGGACTCCGCGGAGAGGTCCAGGAAGA
GGGCGCAGAGATGGAGCAAGCGCAAAGCCGTCGTCATCCACCTCGCCGTCTGCTTCGTCGTCGGCGCCTTGGCGCCACTG
GCCGCCACCGGCGGCCCGTTCATCGACGGCATCCGCGCCTCGGTCCTTCCGTTTGGCGGTGTTCAGCGAGTGGCTCCGCC
GTCGCCCCCTGCTGTCCCTGACATCGGCCTCCTGCTGATCGTCACCGTCACAAGGCCGGACGAGGACGGCATGTCGCAGG
AGGCGTCGGTGACGAGGCTCGGGCACACGCTGCGGCACGTCCCGCCACCCCTGGTATGGATCGTGGTTGGTGCCGAGAAC
AGGTCGGCGTCGACGGTCCAGGTGCTGCGCAGCACCGGCGTCATGTTCCGGCATCTCACAT------------------A
CGCCACCAATATCACCACCGCCGTGAACAATGCCACCAACAACAGCACCGTGGAAGCCAGCGCCAGCACCGCCGTGAACA
ACGCCACCAACAACAGCACCATGGAAGCCAGCGCCACCACCGCCGTGAAC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AACGCCACC
AACAACAGCACCGTGGAAGCCAGCGCC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TCCACGGCCGTGAACAATGCCACCACCAA--------
-------------------------------CAGCACCATGGAAGCCAGCGCCAACAACACAACCACCGCCGCCGAGAAG
AACGGCACCAACAACACCATCGTCGAGAACAC---------------CACCGTGGAAGGCAGCGCCAGCAACACCACCAC
CGCCGCCGAGAAGAACGGCACCAACAACACCATTGTTGAGAACAACA---CCGGGAATGCCAGTGACGAAGCGGACCTGC
AGAAGAACGTGGCGCTGAGCCACATCGAGCGGCACCGGCTGGCCGGGGTCGTCCACTTCGCTGCCGCCTCTGCCATATAC
GACCTCGAGTTCTTTGAAGAGCTCAGGCAGACTCGGTGCGTCGTGCTTCTTCCTTCTCTTGCAGCTTTGCAACATCTTTC
TTTGCCTTTGCCAAAAAAG-TA--CCAACACAGGAGCAACATAATAACAACACTCATGCAATCCTTGATCCAGGGGCGTT
GCAGCATGGCCAACCGCAACTGTGTCATCAGCAGACCAGACAGTAACACTACAAGGACCAACCTGCAACTCATCACAGAT
AACAGGCTGGTACTCCAAGGACTCGAGCACCAATGCAACAGCAACACATACAGCAGATGCGGTTGCTGCACAAGATACAG
GCGCCATCCGCAACAGCTCCAGTTTACCTCCTGAAATAGGCATATCTGGACTTGGGTTCAGGAGCTCCATACTGTGGGAA
TCAGAAT------GGTTCGCCGACAGCAACAGCTCTTCAGGAGGCGGCTCTCAGGACTACATCCAGCTTGTACGACGAAT
GGCGGTCGGCGACGAGGACATGCGGAAGGGCATCCCTTCTGACTGCTCCAAGTCACGGATAATGATGTGGCACCTTGACA
TGCCAAAGTACACTCCAGAAGTTAAAGAACAGGAGACTCCGCGGGAGCAAAGTCTATTGGAGGAAGACGAAGAGGACTAT
ATGACTTGATATTGCGAGCTAGAGAAGAACCATATTGCAGTACAGCTATATCGATAGAGTAGATAGATGAACAAATGTTA
TGCAAAACTCAACACAGGCCAACCTCATGTAGTACATCATTTATTCCTTAACC-AGCACAACTTTGGTCTTGGAAGTGTC
AAACAGTCAAAGAACCTGCTACGTCTAAGACATCTAATGTTCTTTCTCCAGAAATTTCAGTGATACACCAAGGCTTTTGT
CTGCCTTCTAGTTCTAGGTGCAGAGTCTGGAGGTGCAAAAATAATAGTATCTTCATTGGGTGAGCACATTTTGCATGATA
TATGATCAAAAGGCTGAACCACCTCCTTTAGTTTTCCCCAGCAAAACATCTTTTGCCTCGTTGATCTTCGACGCAAGGTA
ATGGCTTCCTCCTGCATCCGGGTGATTGGCAACCATGACCCTCTTGTGTGCCTCTTTCACCTTATCAGGACGGACGTTTT
CCCTGGAGGAATCAAAAGGAAACATGGCAACTTAACAATGATGATAAGACACACAAAACACGTCTCAAATCATAAATCAC
AAATAAAATTGTTGAATCACAAGTAACTGGCACTTATTCAAATGTCAGAATGACCAGTCTGGCATGCCAAGATGCATATA
AATTTAGAAGGAAAAAGATGAAGACCTAATTCTACATGTTGGTCACATCTATATCTATATCTATCTATCTATATATATAT
ATATATATATATATATATATATATATATATATATATATATACCAATAAAAAGACCCAAAGGGGCAGATCCAACGAATCCC
GGCCGTCAAATCAGGTCAATCCAACGACTCAGGCTGCTCCAATGGTGAGCGCTCAACACGTTTAGTGTGCAGTTAATATC
ATACCAAATATTAATGCCAATGCTAATCACATACTTAATATGCAAATAATATCCTACCTAATGTTTACGTGTAATTAATA
TATTACCAAATATCAACGTGCATTGCACGTACACATTTACTAGTAAGTACAGGGGGCACTATGAACGAAAAAAGATAGCA
GGTCAATAATTGATAACTCCTCCTTCATGAGCTCAACAGTTTGTTTTTAATCAACTGAGTAAATATCTTTCTGGCGATGT
GCAGAAAATTCAGAAGGACAGGCCTGAGGCAGTGGTGAAGAAGTACTCCCCACTTGTGCCAAGAGGTCCTGAGTTCGACG
CAGCCTCTCTGCATTGAACTTTGCAGGAGTATGGTCCTGGGTTCGACGCAGCC-----TAATCCTTCCCCAGGCCCTATC
TGGTGTGGGAGCTTCTAGCAATGGGTCTGTCTTTTCTTTTTTATATGTAGAGAAAA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-------S--S-S-S----S----------------
----------SS-SSSSSS----------------------------------------SSSSSSSSSSSSSSS------
-SS---------------S------S-----------------------S----S-------------------------
---------------------S-----------------------------------------SS--------S------
--------------------------------------------------------------------------------
----------------------------------------SS--------------------S--------------S--
----------------S-------------S---------------------------------------S--S--S---
-S------------------S---------------------S-S-----------------------------------
----S-------------S---------------------------------S----------S----SSS---------
-------------S-----S--------------------------------------------------S---------
-----------S--------------S-------------------------------------------S-S-------
------------------------------S-------S-S---S-------S-------S-------------------
S-S------------S----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
-------S--------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-----S----------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S---S-------------------------
---------------------------S-----------------------S---------------------------S
-S-----------------S-----S--------S------------------------S--S-----------------
-------------------------------------------------S------------------------------
-------------------------------------------------------------------------------S
--------------S----S--------------------------------------------S---------------
-----------------------------------S------------S-S-----------------------------
-----------------------------------SS---SSS-S-S-SS-S-SS-------------------------
-S-------S-----S--------S--------S-----SS-S-------------------------------------
-------SSSSSS---------------------------------------------S----------------S----
--------------S-----S-------------------S-----------------------S---------------
------------------------------------------S-----------S-------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------S--------------------------------------------------------S----
-------------------------------------------------------------S----------------S-
---------------S----------------------S-----------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
---------------------------------------------------------S--S-------------------
--------------------------------------------------------------------------------
--------S--S--------------------------------------------------------------------
--------------------------------------------------------
>forward_335
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGATA
CCATCATGCGGGCTC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>reverse_2623
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------ATGACGAAGCGGACCTGA
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_2532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CATTGTCGAGGACACCACCA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_3779
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------TGGGTGATTGGCAACCATGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
