>input_sequence_40164
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----------------------------------------------------------------------------ATGC
AGCGCGCCGCGGCCTCCCTCGCCTCCTCCCGCTCCGCGGCTGCCTGGGCGTGCTCCTCCACCTCGCGCCATGCCATCGCC
TCCTGCTCGGCCACCGCCCGCCGCGACGCCGTCGTGCCTCTCCGGATTCGCGGGCAGCAGAAGGTTCCCCT---CCACTC
CATGTCCCTGTCGCTGCTCTCGCGGAGACGGCCTGCGCGGACGGCAAAAGCGGCGGCTGCTGCGGCGGAACTGGCACCGG
CGTCGGACGAGGTGGCCGCGGGCGGCGGCATTGCCGGCACGGTGCAGCTCGGCGCCATGATCGTCGCCTGGTACCTCCTC
AACATCTACTTCAACATCTACAACAAGCAGGTACGCTACGCACGCGCCGCGCCATTGGCATCCCCTCCCCTGTTCCTCGC
CG----------T-------CCGTCCGTGCGTGACCGACCACT-------CAACAAACCCGCTTTGCCACAACCGCAGGT
TCTCCAGATGCTGCCATTGCCGCTCCCCTACACCATCACCGCCTTCCAGCTCGCCTTCGGCTCGCTCGTCATCTTCTTCA
TGTGGGCCACAAAGCTCCACCCCGTGCCCAAGCTCTCCGCCGCACAGGTCCGTCAGACATTTGAACAACAATTTCTTC--
--CTCTGCTTTTCTCTGAATTCGCTCCCCGCGAACTGAAGCCTCTGCTCCCGTTCAGCTGGCCAAGATCGCGCCGCTGGC
CGCCGGGCACATGCTGGGCACGGTGTTCACCAACATGAGCCTGGGCAAGGTAGCCGTCTCCTTCACGCACACCGTCAAGG
CGTCCGAGCCCTTCTTCACCGTGCTGCTCTCCGCCTTCTTCCTCGGTGAGGTGCCGTCGCCGCTGGTGCTGGGCTCGCTG
GTGCCGATCGTCGGCGGCGTCGCCCTGGCATCGCTGACCGAGGTCTCCTTCAACTGGTTCGTCCCGTCTGCTCCGCTGAC
CACCGGAGAACATTGTCCCTAAATCATGGCCCGATGATTATATTCCCTTTTGCCGTCGACCCCGAATAATTGGGGCCGGG
AAGAATCCCGTCGCTTTCTCACGGTACATAA--ATGATTCCGTCGAG--GCAGGGTCGGATTCTGGAGCGCCATGGCGTC
GAATCTGCTCAACCAGACCAGGAATGTGCTCAGCAAGCGCCTCCTCGGCGGCGAAGAGGTGATTCCTTCTTCTCCTTCT-
TCAGTTCACCAGTAACAATTCAGCACTGTACTATCTTACGATTCTTTCCAAATCCCAAACACTGATGAATTTGTTCATGT
AATGCTGCAGCAGGAGGAGTTCATGGACGACATAAACCTCTTCTCGGTGATCACCGTGCTGTCCTTCCTCCTATCCTTGC
CTCTGATGATCTTTGCAGAAGGGGTCAGCTTCTCCCCAGCGTTCCTCCAGAGCACCGTGAGTCAACCTCGAAGTCTGCAA
AATCCAGACAAGTTGAACTGTTGCATCATCATAATTCCTAGTAGACT---------------------AATAAACTATTG
TGAACTCTGGCTTGTAGGGCCTGAACCTGCAGGAGCTGTGCGTGAGGGCGGCCCTGGCCGGCCTCTGCTTCCATGGCTAC
CAGAAGGTGAGAGA-GAGACACATGACAAACCGTCACACGGTTCTGGCTTCAGTCAGCTCCAAACAAACAGAATGCATGA
TCTGTAACACTGTTACTGACGATGGTCCTGGCAATGGTAATGGTAGCTGTCGTACATGATCCTGGCGAGGGTGTCGCCCG
TGACCCACTCCGTGGCCAACTGCGTCAAGCGTGTGGTGGTCATCGTCTCCTCCGTCCTCTTCTTCCGGACGCCCATCTCG
CCTGTCAACGCACTGGGTAAAAACAAATTGGCCACACTGCAATCTCTTTTTTACTCGAGCAGTGTCTTTTCTACTGCAAT
T--------CTCTTCTGACTTGTTTCTCCTTGCAACTGCAGGGACTGGTGCGGCACTTGCGGGAGTTTACCTGTACTCCA
GGCTCAAGAAAACAAAGCCAAAGAGCTCATGA------------------------------------------------
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>chr3B_1_TraesCS3B01G149400
ATGGAAAGCTTTTCTGAAGTCAAAGTTTGGAAGAGCCTCCTTGGGCCTGGACGG---TTTGTTCCTTTTCGATGAGGGGG
CGGGCATGGGCCATGTTCTCCT---GCCGGTGGCACACCAGTAGCCATGTACGTACGGACGGACGGACGGACGGACTGTA
CGT--------CTGTACCGATGGATCGCCGCCTGCATCCAATCGGTCAGT---TGAGTTGGCGCCGTGGACTACTCATCC
GACCGAGCACACGTGACGTCACTCCCCACGAACCTCCTTTGCTCATTTCCCGATCATGATCCGGTCTCCGTCCCCGTTT-
GCTTTCGCTTTTGTTTTGTCAGCCACCACCGTCGTTATTCTTATTCTTATTATCACACGGCTTGGCTGCACGGCAGCGGA
TCCCGTCGGCGTCGCTAAAATGCCCATATGCATCCTCAGGCGGGTCCTATTGGCATGGCAGC------------------
------------AGCAACAGAGATGATGGCACGAGTTTCG---TCAG---------------------------------
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------------AAAATAAAACCAGGCATCAGAAA-ACCAAAACCATGAGCTTTTCCAACGGAGAGTTTCATCA------
--GTCTCCCGTGGCGAAGCCGCCGGCCGGCCGTCAGAG----CGGCAATTCCTGCCTCGCCATCGTCTTCCTCGCGCCTT
CCTTCCTTTTGGCACGGGGTTTCCACGCCACTCGTGACGCTCGT-------------------------------AGTTG
ACGGCTGTTCTTTCTC--------------------T-CCCTGTTGTTGCGCTCTCCACATACCAAACCGTCCTTTATT-
-----TTTGAGGCGGATGGATTGGGATTGGCCACACATTACATATTCCATTCCAGTGCACGTACCGCCCACTGCAG----
-----TTTCTGCAAACGTTTAAAAAACAAGGTAGTAC---TAG---TAGGAGTATGACCAGGGGGGGACGAATCTGTACG
GGATCGCGGCGAGATTCACCCGGCGCCACCCTCCCCTCCCTGTAACGTCGTTATACAAGTGTACTTATCTCGGGGG----
------ACCCTATAAG----GGAGGCGGCTCGGGCAGCTCCAAGCGCCAGCGAACCAACCACGAGGACACGGCGAGATGC
AGCGCGCCGCGGCCTCCCTCGCCTCCTCCCGCTCCGCGGCTGCCTGGGCGTGCTCCTCCACCTCGCGCCATGCCATCGCC
TCCTGCTCGGCCACCGCCCGCCGCGACGCCGTCGTGCCTCTCCGGATTCGCGGGCAGCAGAAGGTTCCCCT---CCACTC
CATGTCCCTGTCGCTGCTCTCGCGGAGACGGCCTGCGCGGACGGCAAAAGCGGCGGCTGCTGCGGCGGAACTGGCACCGG
CGTCGGACGAGGTGGCCGCGGGCGGCGGCATTGCCGGCACGGTGCAGCTCGGCGCCATGATCGTCGCCTGGTACCTCCTC
AACATCTACTTCAACATCTACAACAAGCAGGTACGCTACGCACGCGCCGCGCCATTGGCATCCCCTCCCCTGTTCCTCGC
CG----------T-------CCGTCCGTGCGTGACCGACCACT-------CAACAAACCCGCTTTGCCACAACCGCAGGT
TCTCCAGATGCTGCCATTGCCGCTCCCCTACACCATCACCGCCTTCCAGCTCGCCTTCGGCTCGCTCGTCATCTTCTTCA
TGTGGGCCACAAAGCTCCACCCCGTGCCCAAGCTCTCCGCCGCACAGGTCCGTCAGACATTTGAACAACAATTTCTTC--
--CTCTGCTTTTCTCTGAATTCGCTCCCCGCGAACTGAAGCCTCTGCTCCCGTTCAGCTGGCCAAGATCGCGCCGCTGGC
CGCCGGGCACATGCTGGGCACGGTGTTCACCAACATGAGCCTGGGCAAGGTAGCCGTCTCCTTCACGCACACCGTCAAGG
CGTCCGAGCCCTTCTTCACCGTGCTGCTCTCCGCCTTCTTCCTCGGTGAGGTGCCGTCGCCGCTGGTGCTGGGCTCGCTG
GTGCCGATCGTCGGCGGCGTCGCCCTGGCATCGCTGACCGAGGTCTCCTTCAACTGGTTCGTCCCGTCTGCTCCGCTGAC
CACCGGAGAACATTGTCCCTAAATCATGGCCCGATGATTATATTCCCTTTTGCCGTCGACCCCGAATAATTGGGGCCGGG
AAGAATCCCGTCGCTTTCTCACGGTACATAA--ATGATTCCGTCGAG--GCAGGGTCGGATTCTGGAGCGCCATGGCGTC
GAATCTGCTCAACCAGACCAGGAATGTGCTCAGCAAGCGCCTCCTCGGCGGCGAAGAGGTGATTCCTTCTTCTCCTTCT-
TCAGTTCACCAGTAACAATTCAGCACTGTACTATCTTACGATTCTTTCCAAATCCCAAACACTGATGAATTTGTTCATGT
AATGCTGCAGCAGGAGGAGTTCATGGACGACATAAACCTCTTCTCGGTGATCACCGTGCTGTCCTTCCTCCTATCCTTGC
CTCTGATGATCTTTGCAGAAGGGGTCAGCTTCTCCCCAGCGTTCCTCCAGAGCACCGTGAGTCAACCTCGAAGTCTGCAA
AATCCAGACAAGTTGAACTGTTGCATCATCATAATTCCTAGTAGACT---------------------AATAAACTATTG
TGAACTCTGGCTTGTAGGGCCTGAACCTGCAGGAGCTGTGCGTGAGGGCGGCCCTGGCCGGCCTCTGCTTCCATGGCTAC
CAGAAGGTGAGAGA-GAGACACATGACAAACCGTCACACGGTTCTGGCTTCAGTCAGCTCCAAACAAACAGAATGCATGA
TCTGTAACACTGTTACTGACGATGGTCCTGGCAATGGTAATGGTAGCTGTCGTACATGATCCTGGCGAGGGTGTCGCCCG
TGACCCACTCCGTGGCCAACTGCGTCAAGCGTGTGGTGGTCATCGTCTCCTCCGTCCTCTTCTTCCGGACGCCCATCTCG
CCTGTCAACGCACTGGGTAAAAACAAATTGGCCACACTGCAATCTCTTTTTTACTCGAGCAGTGTCTTTTCTACTGCAAT
T--------CTCTTCTGACTTGTTTCTCCTTGCAACTGCAGGGACTGGTGCGGCACTTGCGGGAGTTTACCTGTACTCCA
GGCTCAAGAAAACAAAGCCAAAGAGCTCATGAAGACATTCT------------------GATACAGGTTTTTGTGGTACA
AGATTAGATCGATATAGTTATTCAGAGAGAAAATGTATTGAGATA---GGTTGTACAGAACTTGCCACGGCCAGTAGTAC
ACTTGTACTACAGGCCACAGCAGCTTCTTTCAGTAGTAACAGGACCAAACTGCTGGTCTTGAAGACTTGTAACATCCTCC
CTGAATAATGTCAAATCTCCTGACAA-ATACTCCCTCCGTCCAGAAATACTTGTCATCAAAATGAATAAAAAGGGATGTA
TCTAGATACTTGTCATCAAAATGAATAAAAAGGGATGTATCTAGATGTATTTTAGTTCTAGATACATCTTTTTTTGTCCA
TTTTGATGAATAAAAAAGGATGTATCTAGATGTATTTTAGTTCTAGATACATCTTTTTTTGTCCCTTTTGATGACAAGTA
TTTCCAGACGGAGGTAGTAGTACAGTATGCTCAGACGCCCTGAGAATACCACATAACAAAT-------------------
---------TTTGAGAAAAGCGGGCATGTTTGGCTTGTGCCCCTAGCAAAT--------------------TTTGCAAGA
CATTGCTTGACCCTCTGTTGGCCAAAATCTTCGGAATATGCAAGATCACATAGGCAACCAAAATTTTGGTAACCAGCCAA
ATGAAAGCCGAACTTTTGCCAACAATCGGCTAGCCAAAAAATTGGCTGGAGGTCGCCAAAAAGTGGCAACATCTGAGTTG
AGTTTGCAAGATGCCACAGATAACCAAAAATTTGGTAACCAACCAAATGAAGGGCTGCCAAAATTTTGGTAGGGTAAATC
TGGGCACCAACCAAACATTCCCCTTGTGCTGTGAG-AAAACTTGCTATAGAGCACAAGCAAGGCACAGATGTGCACAACA
GTTCAGCAGTTCGCGTGGGGCATTTCAGTTCAACATCAAGCCATGCCGAGAGCATTTACAACAGCCAACATAACTTACAT
GGTTCCGTCCAAAATTCATGGCTCAACCGGTCCGGTTTCCGAAAGATTATAACACGACTACCA
>chr3D_1
ATGGAAAGCTTTTCTGAAGTCCAAGTTTGGAAGAGCCTCCTTCGGCCTGGACGG---TTTGTTCCTTTTCGATGAGGGGG
CGGGCATGGGCCATGTTCTCCT---GCCGGTGGCACACCAGTAGCCATGTACGGACGGACGGACGGGCCGACGGACGGTA
CGT--------CTGTACCGATGGATCGCCGCCTCCATCCAATCGGTCAGTTGATGAGTTGGCGCCGTGGACTACTCGTCC
GACCGAGCGCACGTGACGTCACTCCCCACGAACCTCCTTTGTTCATTTCCCGATCATGATCCGGTTCCCGTCCCCGTTTT
GCTTTCGCTTTTGTTTTGTCAGCCACCACCGTCGTTATTC---TTATTCTTATCCCACGGCCTGGCTGCGCGGCAGCGGA
TCCCGTCGGCGTCGCTAAAATACCCATATGCATCCTATTGGCATAGCA---------GCAGC------------------
------------AACAACAGAGAAGATGGCACGAGTTTCATCATCAG---------------------------------
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------------AAAATAAAACCACGCACCAGAAGGACCGAAACCCTGAGCTTTTCAACGGAGAGAGCAAAATGCGGAGG
GGGTCTCCCGTGGCGAAGCCGCCGGCCGGCCCGCCGTCAGATCGGCAATTCCTGCCTCGCCATCGTCTTCCTCCCGCCTT
CCT----------------TTTCCACGCCACTCGTGATGCATGCTCCTTCTCGGTCTACTACATGTCGTCGCACCAGTTG
ACGGCTGCTCTTTCTTC------TTCTTTCTTTCTTT-CCCTGCTGTTGCGCTCTCCACATACCAAACCGTCCTTTATTT
TTCGATTTGAGGCGGATGGATTGGGATTGGCGACACATTACATATTCCATTCCACTGCACGTACCGCCCACTGCATTTTC
TTTCTTTTCTGCAAACGTTTAAAAAACATGGTAGTAC---TGGTAATAGGAGTATGACCAGGGGGG-ACGAATCTGTACG
GGATCGCGGCGAGATTCACCCGGCGCCACCCTCGCCTCCCTGTAACGTCGTTATACAAGTGTACTTATCTCGGGGGACCT
CGGGGGACCCTATAAGGGACGGAGGCGGCTCCGGCAGCTCCAAGCGCCAGCGAACCAACCACGAGGACACGGCAAGATGC
AGCGCGCCGCGGCCTCCCTCGCCTCCTCCCGCTCTGCCGCGGCCTGGGCGTGCTCCACCACCTCGCGCCATGCCGCCGCC
GGCGCCTCCTGTTCCCCTCGCCGCGACGCCCTCGTGCCTCTCAGAATTCGCGGCCTGGAGCAGCGGCCCGCCGCCCTCCC
CATGTCCCTGTCGCTGCTCTCCGGCAGTCGGCCCGCGCGGACGGCAAAAGCGGCGGCCGCGGCGGCGGAGCTGGCCCCGG
---CGGACGAGGTGGCCGCGGGCGGCGGCATTGCCGGGACGGTGCAGCTCGGCGCCATGATCGTCGCCTGGTACCTCCTC
AACATCTACTTCAACATCTACAACAAGCAGGTACGCACG--------CGCGCCATTGGCATCCCCTCCCCTGTTCCTCGC
CGGAGTTCGCCGT-------CCGTGCGTGCGTGACCGACCAAT-------CAACAAACCCGCTTTGCCACAACCGCAGGT
CCTCCAGGTGCTGCCATTGCCGCTCCCCTACACCATCACCGCCTTCCAGCTCGCCTTCGGCTCGCTCGTCATCTTCTTCA
TGTGGGCCGCCAAGCTCCACCCCGTGCCCAAGCTCTCCGCCGCACAGGTCCGTCAGCCACCTGAACAACAGTTTTTTC--
--GTCTGCTTTTCTCTGAATTTTCTCTCCGGAAACTGAAGCCTCTGCTCCCGTTCAGCTGGCCAAGATCGCGCCGCTGGC
CGCCGGGCACATGCTGGGCACGGTGTTCACCAACATGAGCCTGGGCATGGTGGCCGTCTCCTTCACGCACACCGTTAAGG
CCTCGGAGCCCTTCTTCACCGTCCTGCTCTCCGCCTTCTTCCTCGGCGAGGTGCCGTCGCCGCTGGTGCTGGGCTCGCTG
GTGCCCATCGTCGGCGGCGTCGCCCTGGCATCGTTGACCGAGGTCTCCTTCAACTGGTTCGTCCCGTCTAA----CTAAC
CATCGGAGAACATTGTCCTCTAATCATGGCCCGGTGATTATATTCCCTTTTACCGTCGACCCCGAATAATCGGGGCCGGG
AAGAATCCCGTTGCTTTCTCACGCCACATATATACGATTCCGTTGACGCGCAGGGTCGGATTCTGGAGCGCCATGGCGTC
GAATCTGCTCAACCAGACCAGGAATGTGCTCAGCAAGCGGCTCCTCGGCGGCGAAGAGGTGATTCCTTCCTCTCCTTCT-
TCAGTTCACCAGTAATAACAATTCAG-----CATCTCATGATTCTTTCCAAATTCCAACCACTGATGAGTTTGTTCATGC
AATGCGTCTGCAGGAGGAGTTCATGGACGACATAAACCTCTTCTCGGTGATCACTGTGCTGTCCTTCCTGCTGTCCTTGC
CCCTGATGATCTTTGCAGAAGGTGTCAGCTTCTCCCCGGCGTTCCTCCAGAGCACCGTGAGTCAACCTCAAAGCCTGCAA
AATCCAGACAAATTGAACTGTTGCATCATCATAACTTCTTTTTTTGCATCATCATAACTCTTAAACTAAATAAACTATTA
TGAACTCTGGCATGTAGGGCCTGAACCTGCAGGAGCTGTGCGTGAGGGCAGCCCTGGCCGGGCTCTGCTTCCATGGCTAC
CAGAAGGTGAGAGCCACGTGACAA--------CTCACACGGTTCTGGCTTCAGTCAGCTCCAAACAAACAGAATGCATGA
TCTGTAACACTGTAACTGACGATGGTCCTGGCAATGGTAATGGCAGCTGTCGTACATGATCCTGGCGCGGGTGTCGCCCG
TGACCCACTCCGTGGCCAACTGCGTCAAGCGTGTGGTGGTCATCGTCTCCTCCGTCCTCTTCTTCCGGACGCCCATCTCG
CCTGTCAATGCACTGGGTAAAAACAAATTGATCACACTGCAACCTCTTTCTACTGCAGTCTCT-----------------
----TGTGGCTCTTCTGACTTGTTTCTCCTTGTAACTGCAGGGACTGGAGCGGCACTGGCAGGAGTTTACCTGTACTCCA
GACTCAAGAAAGCAAAGCCAAAGAGTTCATGAAGATGTTTTTTC---TTTCCTGTTTTGGGTACAGGTTTTTGAGATAGA
GGATTAGGTCGATATAGTATCCAC--GAGAAAATGTATTGAGATAGTAGGTTGTACAGAACTTGCCACGGCCAGTAGTAC
ACTTGTACTACAGGCTACAGCAGCTTCTTTCAATAGTAGCAGGACCAAACTTCTGGTCTTGAAGATTTGTAACATCCTCC
CTGAATAATCACAAATCTCCTGACAA-ATG--------------------------------------------------
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----------------------CAATATGCTCAGATGCCATGAGAATACCACACTCCTCAAGGTGCAAAACCAACTTAAA
AAGATA--------------------------GCTTGTGCCATTGCAAGCCCTAACAAATCTTGCAAACAATTGGCTAGA
CATTGCTTGACCATCTGTTGGCCAAAATCTTTGCAATATGCAAGATACCATAGGCAACCAAAATTCTGGCAGCCAACCAA
ATGGATGCCAAAATTTTGCTAGC----------------AATTGGCTGGAGGTCGCCAGAAACTGGCAACATCTGAGGAG
AGTGGGCAAGATGGCACAGATAACCAAAATTTTGGT----------------------------------GGGGTAAATC
TGAGCACCAACCAAACATGCCCCTTATGCTTTGAGAAAAACGTGC--TAGAGCACAAGCAAGGCACACATGTGCAGGATA
GTTCAGCAGTTCATGTCGGGCATTTCAGTTCAACATCAAGCCATGCCGAGAGCATTTACAACAGCCAACATAACTTACAT
GGTTCCGTCCAAAATTCATGGCTCAACCGGTCCGGTTTCCGAAGGATTATAACACGACTACCA
>chr3A_4
---GAAACCTTTTCTGAGGT-CAAGTTTGGAAGAGCCGCCTTGGCCTGGACGTTTTTTTTTTCCTTTTTCGATGAAGGGG
CGT-CCTGGGCCATGTTCTTCTTGTGCCGGTGGCAC----GTGGCAATGTACGGACGTGACTCACCTCAAAAAATGTACG
GACGTGACAGACTGTACCGATGGATCGCCGCCTCG-------------GTTGATGAGTTGGCGCCGTGGACTACTCGTCC
GACCGAGCACACGTGACGTCACTCCCCACGAACCTCCTTTGCGCATTTCCCGATCACGATCCGGTTTCCGTCCCCGTTT-
GCTTTCGCTTTTGTTTTGTCAGCCACCACCGTCGTTATTCTT--TATTCTTATCCCATGGCTGC---------CAGCGGA
TTCCGTCGGCGTCGCTAAAATGCCCCG-TGCATCCTCAGGCGGGTACTATTGCACGACGACGACAACAACAAACAGAGAT
GATTCCTGGAAAAAAAACAGACATGATGGCACGAGTTCCATTTCCACCTGCGCTCCGGCGATTTTCGTCACCACGGTGCA
GCAGGCCGGCGAGCCGTCCCGCCGCATCCGAAAAATCCCGTCGAGATCCACCGCCGCACACCCGCCCCCCTCTCTTGTTT
CTCCTTCATAGCCCTCATCGCCATGGGCATATATTCCGCTACTCGCTTGTAGTGTTGCGGCGACCCCCCACATTGGGAGT
GGGGGGAACCATTGAAGACATGGTGACGGTTTGAAACCAGCAGCTGGGTTGTTTGCTGGAACCGCCAGAGCGGGAAGTTA
GAACCAGCATTTTTTTTCTGCACCCGACTAACGTTAGAGTTGGAACCAACAACTGTCTTTACTGAACCGGCCCGAACCGT
AAGCTGGAACCTGTCGGCACCAGAGCCGAAACCAACACTGGTCACTGGTTTTTGCTTCAATCGGAGGGGTGGTTCTACGG
CGGCGACGAAGGCGGAGTCCCGATTTGGCTGCAGCCGTCCATGGTTTTGGCCATGTCGGACAAATTTTTTTTATACGTCC
ATTCACGACAGAGCGACGACCTGCAACGGTGGGCAATGGTGATTTGCTACAGTCATCATTTCTTTTGCTACGACCGGCAA
GATTATTTGCTCCACCCATTGTCGACAGAGCTACGGTGGGGATGATATTTTTGTTGCAACTATTTTATTTTTTCATATGC
CCAGTGGTTTTTTCTGCTACAATCCATTCAGGGTGTTGGCCGTCGTTCGTAGAAACTCATGCGTCGACGACGAGGGCGGC
ATGTGGCACACCGGAGTGCTGCAATCGGCCGACGGGGGAAGATGCAACCGGGTCACCGGCGGATCTGCAATTGAAATCGA
TGATGAGGGGGAGGTTCTTCAGCGAGCGGCGGATCTGCAATTGAAATCGACGATGAGGGGGAGGTTCTTCAGCGAGCACT
GTCGCCGGAGACGACGCGCCGCCCTACAGTCGTGAATGGCGGGGAACCGGATCCTCTAACATTAAGAAGGAAAGTTAGAG
AAGCTACAATACCGTAACTTTCCTTCTTTCTATCCATATGATTATGGCTAAAATGACTTAAATTAATTTGCAAATTAATA
ATCTATTGTGTACATTACCAAATTGACGGTGAAATAAAATTAATTTTAAATTATTTATATCAACAGTAAACAACCTACTT
ACGGAGTACTACCTACTAACAGTCCCTAATGTTCCTTCTTTATTTTACACTCGGCAAACATCGTAGCACCGTGACTTTTC
TTCACAATGTTAGAGGATCCGGTTTCGGATGGCGGGCCTTTTGTTCATGAACGAGCTATGGCGGCGCGCTCCTGACATCG
AAGACGTGAGAGGCACGGATCGGACGGTTACTATGTGCTGTATCACACGGCTGCGCGGCGAAATTTGGGCTGGTCGACTG
GCGGCGCGGCCCAAAATGAAACCACGCATCGTGATCAAAACAAGGGAGCGAGCG---------------AAATGCGGAGG
GGATCTTCCGTCGCGAAGCCGCCGGCCGTGAGAAGC--------GCAATTCCAACCTCGCCACCGTCTTCCTCCCGCCTT
CCT----------------TTTCCACGCCACTCGTGACGCACGCTCCTTCTCGGTCTATTACATGTCGTCGCGCCAGTTG
ACGGCTGCTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCCCCTGCTGTTGCGCGCTCCACATACCAAACCGTCCTTTATTT
T-----TTCAGGCTGATGGGTTGGGATTGGCCACACATTACATATTCCATTCCACTGCACGTACCGCCCACTGCAATTTC
TTTCTTTTCTGCAAACGTTTAGAAAACAAAGGTACACTAATAG---TAGGAGTATGACCAGGGGGGGACGAATCTGTACG
GGATCGCGGCGAGATTCACCCGGCGCC---------TCCCTGTAACGTCGTTATACAAGTGTACTTATCTCGGGGG----
------ACCCTATAAGGGACGGAGGCGGCTCCAGCACCTCCAAGCGCCAGCCAACGGACCAACCGCGGC---CAAGATGC
AGCGCGCCGCGGCCTCCCTCGCCTCCTCCCGCTCCG---CGGCCTGGGCCTGCTCCACCACCTCGCGCCATGCCGCCGCC
TCGTGCTCTGCCGCCGCCCGCCGCGACGCCGTCGTGCCTCTCCGAATTCGCGGCCAAGAGCAGCGGCCCGCCGCCCTCCC
CATGTCACTGTCGCTGCTCTCCGGGAGTCGGCCCCCGCGGACGGCAAAAGCGGCGGCCGCGGCCGCGGAGCTGGCCCCGG
---CGGACGAGGTGGCCGCGGGTGGCGGCATTGCCGGCACGGTGCAGCTCGGCGCCATGATCGTCGCCTGGTACCTCCTC
AACATCTACTTCAACATCTACAACAAGCAGGTACGC----------------CATTGGCATCCCCTCCCCTGTTCCTCGC
CG----------TTCGCCGCCCGTCCGTACGTGACCGACCAACCAAGAACCAACAAACCCGCTTTGCCACAACCGCAGGT
GCTCCAGGTGCTGCCATTGCCGCTCCCCTACACCATCACCGCCTTCCAGCTCGCCTTCGGCTCGCTCGTCATCTTCTTCA
TGTGGGCCGCCAAGCTCCACCCCGTGCCCAAGCTCTCCGCCGCACAGGTCCGTCAGCCACCCACACGAACACAAAAAGGG
CTCTGTGATTTTGTCTGAATTTGCTCCACGGAAACTGAAGCCTCTGCTCCCGTTCAGCTGGCCAAGATCGCGCCGCTGGC
CGCCGGGCACATGCTGGGCACGGTGTTCACCAACATGAGCCTGGGCAAGGTGGCCGTCTCCTTCACGCACACCGTCAAGG
CATCGGAGCCCTTCTTCACCGTGCTGCTCTCCGCCTTCTTCCTCGGCGAGGTGCCGTCGCCGCTGGTGCTGGGCTCGCTG
GTGCCGATCGTCGGCGGCGTCGCCCTGGCGTCGCTGACCGAGGTCTCATTCAACTGGTTCGTCCTGTCTGCTCCGCTGAC
CGTCGGAGAACATTGTCCTCTAATCATGGCCCGATGATTATATTCCCTTTCGCCGTCGACCCCGAATAATTGCGGCCGGG
AAGAATCCCGTCGCTTTCTCACGGTGCATAA--ACGATTCCGTTGACGCGCAGGGTGGGATTCTGGAGCGCCATGGCGTC
GAATCTGCTCAACCAGACCAGGAATGTGCTCAGCAAGAGGCTCCTCGGCGGCGAAGAGGTGATTCCTTCTTCTTTCTTTC
TCAGTTCACCAGTAACAATTCAGTAG-----TATCTCATGATTCCTTCCAAATTCCAAACACTGATGAATGTGTTCATGT
AATGCTGCTGCAGGAGGAGTTCATGGACGACATAAACCTCTTCTCGGTGATCACCGTGCTGTCCTTCCTCCTATCGTTGC
CTCTGATGATCTTTGCAGAAGGGGTCAGCTTCTCCCCAGCGTTCCTCCAGAGCACGGTGAGTTAATCTGAAAGTCTCCAA
AATTCAGACAAGTTGAACTGTTGCATCATCATAACTCC-----------------------TAAACTAAATAAACTATTA
TGAACTCTGGCATGTAGGGCCTGAACCTGCAGGAGCTGTGCGTGAGGGCGGCCCTGGCAGGGCTCTGCTTCCATGGCTAC
CAGAAGGTGAGGGACGAGACACATGACAAATCCTCACACGGTTCTGGCTTGAGTCAGCTCCAAACAAACAGAATGCATGA
TCTGTAACACTGTTACTGACGATGGTCCTGGCAATGGTAATGGCAGCTGTCGTACATGATCCTGGCGAGGGTGTCGCCCG
TGACCCACTCCGTGGCCAACTGCGTCAAGCGTGTGGTGGTCATCGTCTCCTCCGTCCTCTTCTTCCGGACGCCCATCTCC
CCTGTCAATGCACTGGGTAAGAACAGACCCT-------------TCGTTTTTCCTCGAGCAGTCTCTTTTCTACTGCAAT
GTCGTGTGGCTCTTCTGACTTGTTTCTCCTTGTAACTGCAGGGACTGGAGCGGCACTGGCGGGAGTTTACCTGTACTCCA
GGCTCAAGAAAGCAAAGCCAAAGAGCTCATGAAGATGTTTTTTTTATTTTTCTGTATTGGATACAGGTTTTTGAGATAGA
GGATTAGGTCGATATAGTATCCAC--GATAAAATGTATTGAGATAGTAGGTTGTACAGAACTTGCCACGGCCAGTAGTAC
ACTTGTACCACAGCCTACAGCAGCTTCTTTCCATAGTAGCAGGACCAAACTTCTGGTCTTGAAGATTTGTAACATCCTCC
CTGAATAATCACAAATCTCCTGACAACATG--------------------------------------------------
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----------------------CAAGATGCTCTGATGCCATGAGAATGC--CACTCTTCAAGGTGCAAAACCCACTTAAA
AAGATAACCTTTGAGAAGAGCGGGCATGTTTGGCTTGTGCCATTGCAAGCCCTAACAAATCTTGCAAACAATTGGCTAGA
CATTGCTTGACCATCTGTTGCCC-AAATCTTTGCAATATGCAAGATCCCATAGGCAACCAAAGTTTTGGCAGCCAACCAA
ATGGAAGCCAAAATATTGCCAGC----------------AATTGGCTGGAGGTCGCCAGAAACTGGCAACATCTGAGGAG
AGTGGGCAAGATGGCACAGATAACCAATATTTTGGTAACCAACCAAATTAAGGGCTGCCAAAATCTTGGTGGGGTAAATC
TGAGCACCAACCAAACATGCCCCTTATGCTTTGAG-AAAACATGC--TAGAGCACAAGCAAGGCACACATGTGCAGGATA
GTTCAGCAGTTCACGTCGGGCATTTCAGTTCAACATCAAGCCATGCCGAGAGCATTTACAACAGCCAACATAACTTACAT
GGTTCCGTCCAAAATTCATGGCTCAACCGGTCCGGTTTCCTAAGGATTATAACACGACTACCA
>SNPs
---------------------S----------------------------------------------------------
-----------------------------------------------------S------------S-S-----------
---------------------------------S------------------------------------------S---
-----------------------------------------------------------------S--------------
------------------------------------------S--S--S-----S--------------S----------
---------------------------------------------S------SSSSS-----------------------
-------------S-------------------------S----------------------------------------
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------------------------S---------S----------S----------S-SS-SSSSSSSSS-SSS------
--------------------------------S-S-SS-----------------------------------S------
---SSSSSSSSSSSSSSSS---------------------S--S------------------------------------
-------S-------S---------------------------S------------------------------------
------------------------------------------------------S--------------------S----
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------------------S-----------------------------------------S------
-------------------------------------S--S---------------S-----------------SS----
--------S---S-------------------------------S--------S---S--S--SSS---SS-----S-S-
---------------------SS----S-----S-----------------------S--S--------S-----S----
SSS-----------------------------------------------------------------------------
------------------------------------SSSSSSSSSSS---------------------------------
-----------------------------------------S--------------------------------------
S------S------------------------------------------------------------------------
--------S-S---------------------------------------------S--SS-------------S-----
---------------------S--------SS------------------------------------------------
---------------------------------------------------S----------------------------
-S--S-----------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--S---------------SSS-----------------------------------------------------------
----------------------------------S--------S--S---------------------------------
---------------------------------------S----------------------------------------
-------------------------SSSSSS-----S-S--------------S--------------------------
--------S-----------------------------------------------------------------------
---------------------------------------------------------------------S----------
----------------------------------S----SS-SSSSS--------------------------------S
-----------S-------------------------------------------------S------------------
------------------------------S-S-----------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------S---------------------SS----------S---------S----------S----------------
S-------------------------------S---------------S--------S----------------------
-----------S-----------------------SS--S---------------------------------S-S--S-
S------S----------SSSSSSSS------------------------------------------------------
---------------S----------------S-----S------------S-------------S--------------
---------SS------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS--S----------S---S-------------SSS-SS-S-------------------
-----------------S-----------------------SS-SSS-SSS----------------------S--S---
------------S------------------S-S-------------S---------------------S-S---S----
---S-----S--S--------S-SSSSSSSSSSSSSSSS-------------------S---S--------------SS-
---SS--------S---------------S------------------S---------------S-----S---------
--S---------------S------S----S----------S---SS--------------------S-------SS-S-
------------S---S---------------------------------------------------------------
-------------------------------------------S-------------------
>forward_2095
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCCTT
CCTTCCTTTTGGCAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_4142
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCTCTGCTTCCATGGCTAC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_3540
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CACCGGAGAACATTGTCCCT------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_5443
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GGCACCAACCAAACATTCCC----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
