>input_sequence_40145
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--------------------------------------------------------------ATGGGGCGAGGGCGCAGC
GAGATAAAGAGGATCGACAACCCCACGCAGCGCCAGTCCACCTTCTACAAGCGCAGGGACGGCCTCTTCAAGAAGGCCCG
GGAGCTCGCCGTCCTCTGCGACGCCGACCTCCTCCTCCTCCTCTTCTCCGCCTCCGGCAAGCTCTACCAGTACCTCGCGC
CCACCGTCCCCTCGTAAGCCAATCACCTCACCGACCTACCCGCTCGTTCAATTAACCTC----TGTACTGATTTCCTTGT
ACGTCCGCCCATGCTT-GCTCGTGCATCTCTTATTC-TTGGCAGTGTCAAGGAGTTTGTCGAGAGGTACGAGGCTGCGAC
GCACACCAAAGTTTGGTCCGACATCCGCCAGGTACGTGAGTGGTACTA-----TTGCAATGCTTCGATTCAGATTTCAGA
GTGATGATGCGGTTCTGATAGAGCGCCCCTTTTGCATCGAGCAGGAGAGGCGCGCCGAGCTGGAGAAGGTGGCCAAGATG
TGCGACCTCTTGGAGAAGGAGCTGAGGCAAGTAAAG---CATAGAGTATACATGGCCGGCCAGCGCGCGCGTGGCTGCAC
TCCGCCCGTTTTGATCTCACTGCGTGTTAATCTGTTGGTAGGTTCATGACGGTTGACGACGGGGAGCAGTACTCGGTGCC
GTCGCTGGCGGCGCTGGAGCACAACCTGGAGGCGGCCATGCACAAGGTGCGCTCCGAGAAGGACCGCAAGATCGGGGGCG
AGATGAGCTACCTCGAGAACATGGTGAGCGTGCGGTGCACCCCTCTTCAATCGACTCGTTTGCATATTTTTTTACTTAGC
GCGGTGACTCGCCTAA----TGTTTTGTTCCGTGCTGCATGCAGATCAGGGGGAAACAAGCGGAGCGCTACGGCCTGTGT
GACAAGGTGAGCGCTTCTA--GATTCTTTCCAAGTTCCTGCGGCGTTCATCAGTGGTGTTATTATTAACCAGAGAGGACA
AAAACAGTACCCAGTCAGAAGATTTTGAAACCCTTCAATGAATCTGAAGCAATGGTA---------CTACTACTTGAAGA
AGTAGCAAGTGGA-GTGATTTATAGTAGTTGTATAACCATCATTGGCAGGGTTCCATGATGATGTCTCGGTTGTGCTTAG
TTGAAGTAGCAACC------------------------------------------------------------------
-------------GGCTTAGTCTTCTACTCCTTTTTAGCACGAGTATAAATCCTTATA------------GTTGAAAAAC
GGGCACC--ATAGATCACACTGTTTC--TAGAACAAAAGTCAAGAAATTTTATACGTAGTACGTACTTGTAGAGCGACTG
TTCTATGGAATAGGACCTTGGTATAGATGCCTGGATATACACAGACAGTAGCAAAAATAGGCGTTTCTTTTTCCCATCTA
CAAAAAATAGGATTCCATCCGAAATG-AAAAAATAGGAGCCTCCATCAAGATGAGGAGGCGTGCTCGCCCTACTCATGGT
AGCGCTCAGTAAATGGAGTGCTCCATTGCGAGTCACGAAGTGACACAAAGCCTACCGACCTACAACACGTAGACCCGTTC
ATTGCAGCTTCTTTACATTGGAGGTGGAATAACTTTTCACTCCCTGCAAGCAACGGCGTGAGGCTAAGGCCAGGCTAGCC
TACGTGCACCGCAGGGGTAGCCTGCCCAAGCCTATCTGAACTGGACAGCTAGCTACTACT--------------------
--------------------------------------------------------------------CTTTGGCGCATA
TATAAACTTCTTTACATTTTTCTTACTTTGTTTCTTTCAAGAATGTTTATCAGCCGTCGAGTTTTTTGTTCATGATATTT
TGTGCTTCTCACGACCAATCCCGCTGCAATTTGGTTATGTTTATGTAATTTTATTATCCACAGCTTGCTCATGCTCAGAG
CCTCAAGGTCGTTGAAGGTGGATCCACCTCGCTGAACAACGGCCTGGACCTCAAACTTGGTAGGTTCTCCCAGTCGATTC
AGAACCTAGGTACAGTACAAGTAAGTAGGTCGCAGATCTGACGTGTGCCTTGTGCAATGCTTGCAAATGCACGCAGGATT
CAACTAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------
>chr3B_1_TraesCS3B01G318300
TATAACAAAAAGCTTCCTTGTACAGACTTTCAAGTGGTTGCGCGTGTCTATTTTACATGACAATTGTTGTATCTAAAACT
TTTCATGTTTTAATCTTCTTTTTTAATAGAAAAAATATTCTATTTCGATGAAAGATGTGCCCAGCTGTTTTTACATGCCA
TGCCAAATTGTTTGTACACAACTATATTTGTATGTAACGCTATATATTTTAAATCTTGACCGTTGCTGCATAAAATTGAC
GATCAAGATAATTTAATACATGTGGATGAACGTGATGTCTTGTTTGCCTCTTGTCTTAAGTATATAATAGATAGTCCCTC
AAAAACAAAAACAAAAAGTATATATTAGATAGATATGAGTTGACTAAGGAGCTAAA-CTTTTTGAGGTTGTACATCAAAC
ATTGATGTGTGTCTACAAAGTTTTTGAGAATGTTTGAATATGTACTTTTTTTCAAGAAAATCGATCTCACCTAATATGAG
ATCTCACATAAGTCTCCCTCACCCTATCGTTAAGAATAATAACGGCAGGGAAAATGATCAGATCCCGAAATTTTTAGAAA
GCAGAGTTTCGAAAAAGATCAAAACAGTGAATTTGGCCACCCTGGCCGCATCCACTGTCGTGGAGGACAGTCGACACGTC
TCCGTCGTCTCAGCCTTGCTCCCTCCCACGCCTGCAGAAAAGCAAGCAAAGCCAGGCCTGACACGCGACTAGACTATCTT
GTCTTACTTCGGAGGGCCACCCCGTCTTTAAACCAGAAAAAACCCAA------------TCGCTCTCGCCCGGCCAAGGC
CAACTACTACAAGCACCCCGAAGAAGCAGCAACTGTTACATCCCCCTCCTCCACGCAGCAGCACAGTAGAGCAGAGAGCT
AGTCGCTC-----GCGCGGCGCGGGCAATCCAAACCTTTCCTTATTCTTGCAAGGTCTCGGAAACGGAAAGGCCCCTGCT
CCGCTGCGCGTTTGCGAGTTTGGGAAGAAGCCTTGCCTGCCGGAAGCGGGGAAACG----AGATGGGGCGAGGGCGCAGC
GAGATAAAGAGGATCGACAACCCCACGCAGCGCCAGTCCACCTTCTACAAGCGCAGGGACGGCCTCTTCAAGAAGGCCCG
GGAGCTCGCCGTCCTCTGCGACGCCGACCTCCTCCTCCTCCTCTTCTCCGCCTCCGGCAAGCTCTACCAGTACCTCGCGC
CCACCGTCCCCTCGTAAGCCAATCACCTCACCGACCTACCCGCTCGTTCAATTAACCTC----TGTACTGATTTCCTTGT
ACGTCCGCCCATGCTT-GCTCGTGCATCTCTTATTC-TTGGCAGTGTCAAGGAGTTTGTCGAGAGGTACGAGGCTGCGAC
GCACACCAAAGTTTGGTCCGACATCCGCCAGGTACGTGAGTGGTACTA-----TTGCAATGCTTCGATTCAGATTTCAGA
GTGATGATGCGGTTCTGATAGAGCGCCCCTTTTGCATCGAGCAGGAGAGGCGCGCCGAGCTGGAGAAGGTGGCCAAGATG
TGCGACCTCTTGGAGAAGGAGCTGAGGCAAGTAAAG---CATAGAGTATACATGGCCGGCCAGCGCGCGCGTGGCTGCAC
TCCGCCCGTTTTGATCTCACTGCGTGTTAATCTGTTGGTAGGTTCATGACGGTTGACGACGGGGAGCAGTACTCGGTGCC
GTCGCTGGCGGCGCTGGAGCACAACCTGGAGGCGGCCATGCACAAGGTGCGCTCCGAGAAGGACCGCAAGATCGGGGGCG
AGATGAGCTACCTCGAGAACATGGTGAGCGTGCGGTGCACCCCTCTTCAATCGACTCGTTTGCATATTTTTTTACTTAGC
GCGGTGACTCGCCTAA----TGTTTTGTTCCGTGCTGCATGCAGATCAGGGGGAAACAAGCGGAGCGCTACGGCCTGTGT
GACAAGGTGAGCGCTTCTA--GATTCTTTCCAAGTTCCTGCGGCGTTCATCAGTGGTGTTATTATTAACCAGAGAGGACA
AAAACAGTACCCAGTCAGAAGATTTTGAAACCCTTCAATGAATCTGAAGCAATGGTA---------CTACTACTTGAAGA
AGTAGCAAGTGGA-GTGATTTATAGTAGTTGTATAACCATCATTGGCAGGGTTCCATGATGATGTCTCGGTTGTGCTTAG
TTGAAGTAGCAACC------------------------------------------------------------------
-------------GGCTTAGTCTTCTACTCCTTTTTAGCACGAGTATAAATCCTTATA------------GTTGAAAAAC
GGGCACC--ATAGATCACACTGTTTC--TAGAACAAAAGTCAAGAAATTTTATACGTAGTACGTACTTGTAGAGCGACTG
TTCTATGGAATAGGACCTTGGTATAGATGCCTGGATATACACAGACAGTAGCAAAAATAGGCGTTTCTTTTTCCCATCTA
CAAAAAATAGGATTCCATCCGAAATG-AAAAAATAGGAGCCTCCATCAAGATGAGGAGGCGTGCTCGCCCTACTCATGGT
AGCGCTCAGTAAATGGAGTGCTCCATTGCGAGTCACGAAGTGACACAAAGCCTACCGACCTACAACACGTAGACCCGTTC
ATTGCAGCTTCTTTACATTGGAGGTGGAATAACTTTTCACTCCCTGCAAGCAACGGCGTGAGGCTAAGGCCAGGCTAGCC
TACGTGCACCGCAGGGGTAGCCTGCCCAAGCCTATCTGAACTGGACAGCTAGCTACTACT--------------------
--------------------------------------------------------------------CTTTGGCGCATA
TATAAACTTCTTTACATTTTTCTTACTTTGTTTCTTTCAAGAATGTTTATCAGCCGTCGAGTTTTTTGTTCATGATATTT
TGTGCTTCTCACGACCAATCCCGCTGCAATTTGGTTATGTTTATGTAATTTTATTATCCACAGCTTGCTCATGCTCAGAG
CCTCAAGGTCGTTGAAGGTGGATCCACCTCGCTGAACAACGGCCTGGACCTCAAACTTGGTAGGTTCTCCCAGTCGATTC
AGAACCTAGGTACAGTACAAGTAAGTAGGTCGCAGATCTGACGTGTGCCTTGTGCAATGCTTGCAAATGCACGCAGGATT
CAACTAGGAACGGATGAAAGCTTCTGGCCGTGGGGTTCTGCTCTAGTGTTGCTTTTGAGCTCGAGTGTTATGTCAAGTTC
AAATATTCTGCAATTTCCTTCGAAGGGATTGTATAAACTTGTAAGAGACCACTGTCTTATGAGATGTTTGGCTTAGGCTG
GACTGGGCTGTGCGTTGTGCCTCCAATAGGTGGAATTTTATACCAGTCCAGTATTGCAATAATGTAGTTAACGGTCACTT
CTTGCTCTAG-TTCGTACGTTCTTCATCAATGTGGACCATTCGTGTTTTTCTCGATTTCTGCTGCTTATTGTATGACGTT
CTTGATTACGTCTTCATCTCTGTTGATTCCCAGGCATGCTGGCCAGCATCTTCTAATTTTCTGCCGGTCTTTATTTTGTC
TGATCCTGAAAATATAACATTGTGCATTTGATTCAAAAAAATAAAGAGATCGCAACAACAGTACATAAAATCTGATGAAG
AAAACAGGTTTGCAACAATTCCAGTAAGGCAAGAGAAAAGACAGTCTCAACTTGAAACATCGAAGAGAACAACAAAAATG
AGGTCGGTAAAAACGTATCCGTTGATAATTAGACCTCAAAGATCATATTCGATGAATTATCTCATCATTGCTCCAATCCA
TGAAATCAAAGGTGTAGTTCGCGGACGAAAGGAGAAAAGAATAGTTCTTGGTAAAAAGTGAAAATTACTCGCCGCTTCCC
ACCCCAGCCTGAGAATAGCGCTAACAATGGGATAATCCCCTATGAGAACCCCTTGGACATCCCCATCCCGGTTTACATGA
TCCGGGATAAAAATTTCCTATACCTAGTGCTAAGGTGTTGTCCTTGTTCGGTTGCTACCGATCTTGGTCATTTTTAGTGT
AAGATAGGGCAAGGGTTTTTAGGAGTTTTGTTGTTCTACAATTTCTTTGTGTTTTTCTGGTTGATGCTAATGTATATTTA
GTCATATACATGGTCCTAGCTGCCATATCTGAAAAGCAGGTTGCCGAT
>chr3A_353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------ATATGAGTTGAATTAGGAGCTGAAACTTTTTGAGGTTGTACATTAAAC
ACTGATGTATGTCTACAATTTTTTTGAGAATGTTTGAACGTATACATTTTTTTCAAAAAAAAAAATCAATCTCAT---AG
ATCTCGCATAAGCCTCCCTCACCCTATCGCTAAGGATAATGATATAC-GGAAAATGATCAGATCCCAAATTTTTTAGAAA
GCATGGTTTTGAAAAAGATC-AAACAGTGAATTTGGCCACCCTGGCCGCATCCACTGTGGTGGAGGACAGTCGACACGTT
TCCGTCGTTTCAGCCTTGCTCCCTCCCACGCCTGCAGAAAAGCAAGCAAAGCCAGGCCTGACACGCGACTAGACTATCTT
GTCTTACTTCGGAGGGCCACCCCGTCATTAAACCAGAAAAAACCCAACCCAACCCAT-----------CCCGGCCAAGGC
CAACTACC---AGCACCCCGAACAAGCAGCAACTGTTACATCCCTCTCCTCCACTCACCAGCACAGTAGAGCAGAGAGCT
AGTCGCTC-----GCG-----CGGGCAATCCAAACCTTTCCCTATTCTTGCAAGGTCTCGGAAACGGAAAGGCCCCTGCT
CCGCTGCGCGTTTGCGAGTTTGGGAAGAAGCCTTGCCTGCCGGAGGGGGGGAAACGGGCGAGATGGGGCGAGGGCGCAGC
GAGATAAAGAGGATCGACAACCCCACGCAGCGCCAGTCCACCTTCTACAAGCGCAGGGACGGCCTCTTCAAGAAGGCCCG
GGAGCTCGCCGTCCTCTGCGACGCCGACCTCCTCCTCCTCCTCTTCTCCGCCTCCGGCAAGCTCTACCAGTACCTCGCGC
CCACCGTCCCCTCGTAAGCCAACCGCCTCACCCGCCTACCCGCTCAGTTAACCTCTCTTTAAATGTGCTGATTTGGTTGT
ACGCCCGCCCATGCTTTGCTCACGCATCTCTTGTTCTTTGGCAGTGTCAAGGAGTTCGTCGAGAGGTACGAGGCTTCGAC
GCACACCAAAGTTTGGTCCGACATCCGCCAGGTATGTGAG---------TACTTTGCAATGCTTCGATTCAGAGTGATGA
TTGACAGAGGC--------------CCCCTTTTGCATCGAGCAGGAGAGGCGCCGCGAGCTGGAGAAGGTGGCCAAGATG
TGCGACCTCTTGGAGAAGGAACTGAGGTAACCATGCATACATAC---ATACATGGCCGGCCACAGCGCGCGTGGCTGCGC
TGCGCCTGTTCTGAACTCGCCGTGTGTTAATCTGTCTCTAGGTTCATGACGGTGGACGACGGGGAGCGGTACACGGTGCC
GTCGCTGGCGGCGCTGGAGCACAACCTGGAGGCGGCCATGCACAAGGTGCGCTCCGAGAAGGACCGCAAGATCGGCGGCG
AGATGAGCTACCTCGAGAACATGGTGAGTGTGTGCTGTACCCCTCTTCGATCGACTCGTTTTGCGTATTTTCTACTTAGC
GGCGACTCAG----------TGTTTTGTTTCGTGCTGCATGCAGATCAGGGGGAAACAAGCGGAGCGCTACGGTCTGTGT
GACAAGGTGAGCGCTTCTATAGATTCTTTCCAAGTTCCTGCGGCGTTCATCATTAGTGTTATTATTAACCACACAGGACA
AAAACAGTACCCAGTCAGAAGA-TTTGAAACCCTTCAATGAATCTGAAGCAATAGTAGTAGTAGTACTAGTT------GA
AGTAGCAACTGGTGGTGATTTATA---GTTGCATGACCATCGGTGGCAGGGTTCCATGATGATGCCCCGGTTGTGCTTAG
TTTTAACCTGAGCCTTTTTTTG-------------------------------CTAGTGTTGCTGAATTGGAGAGCCCCA
AACGAAGCAAAAAGGCTTACTATTGTACTCCTTTTTAGCACTAGTAG--ATCCTTATG------------GTTGAAAAAC
GGGCGCCATATAGATCACACTGTTTC--TAGAACAAAAGTCAAGAAATTTAATCC---GTACGTACTTGTAGAGGGACTG
TTCCATGGAATAGGACCTTGGTATAGATGCCTGGATATACACAGACCGTAGCAAAAATAGGCGTTTCTTTTTCCCATCTA
GAAAAAATAGGATTCCATCCGAAAT-----------GAGCCTCCATCAAGAGGAGGAGGCGTGCTCGCCCTACTCATGGT
AGCGCTCAGTAAATGGAGTGCTCCATTGCAAGGCACGAAGTGACACAAAGCCTACCGACCTACAACACGTAGACCCGTTC
ATTGCAGCTTCTTTACATTGGAGGTGGAATAACTTTTCACTCCCTGCAAGCAACGGCGTGAGGCTAAGGCCAGGCTAGCC
TACGTGCACCGCA-GGGTAGCCTGCCCAAGCCTATCTGAACTGGACAGCTAGCTAGTACACTCCCTCCTTAAACAAATAT
AAAAGCGTTTAGATCATTATTTTAGTAATCTAAACGCTTTTGTATTTCTTTACAGAGGAAGTACTATGCTTTG--GCACA
TGTAAACTTCTTTACATTTTT-TTACTTTGTTTCTTTCAAGAATGTTTATCAGTCCACGAGTTTTATGTTCATGATATTT
TGTGCTTCTCACGACCAATCCAGCTACAATTTGGTTATGTTTATGTAATTTTATTATCCACAGCTCGCTCATGCTCAGAG
CCTCAAGGTCGTTGAAGGTGGATCCACCTCGCTGAACAACGGCCTGGACCTCAAACTTGGTAGGTTCTCCCAGTCGATTC
AGAACCTAGTTACAGTACAAGTAAGTAGGTCGCAGATCTGACGTGTGCCTTGTGCAATGTTTGCAAATGCACGCAGGATT
CAACTAGGAACGGGTGAAAGCTTCTGGCCGTGGGGTTCTGCTCTAGTGTTGCTTTTGAGCTCGAGTGTTATGTCAGGTTG
AAATATTCTGCAATTTCCTTCGAAGGGATTGTATGAACATGTAAGAGACCACTGTCTTATGAGATGTTTGGCTTAGGCTG
GACTGGGCTGTGCGTTGTACCTCCAATAGGTGGAATGTGATACCAGTCCAGTATTGCAATAATGTAGTTAACGGTCACCT
TATGCTCTAG-TTCATGCGTTCTTTGTCAATGTGGACTATTCGTGTTTTTCTTGATTTCTGCCACTTATTGTGTTATGTT
CTTGATTACGTCTTCATCTCTGTTG-------------------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_535
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-------------------------------------------------------GATGAGATCCTAAATTTTTTAGAAA
CCGGAGTTTTGAAAAAGATCAAAACAGTGAATTTGGCCACCCTGGCCACATCCACTGTGGTGGAGGACAGTCGACACGTC
TCCGTCGTTTCAGCCTTGCTCCCTCCCACGCCTGCAGAAAAGCAAGCAAAGCCAGGCCTGACACGCGACTAGACTATCTT
GTCTTACTTCGGAGGGCCACCCCGTCTTTAAACCAGAAAAAACCCAACCCATCTCACACTCGCTCTCGCCCGGCCAAGGC
CAACTACTACAAGCACCCCGAACAAGCCGCAACTGTTACATCCCCCTCCTCCACGCACCATCACAGTAGAGCAGAGACCT
AGTCGCTCGCGCGGCG-----CGGGCAATCCAAACCTTTCCTTATTCTTGCAAGGTCTCGGAAACGGAAAGGCCCCTGCT
CCGCTGCGCGTTTGCGAGTTTGGGAAGAAGCCTTGCCTGCCGGAAGGGGGAAAACG----AGATGGGGCGAGGGCGCAGC
GAGATAAAGAGGATCGACAACCCCACGCAGCGCCAGTCCACCTTCTACAAGCGCAGGGACGGCCTCTTCAAGAAGGCCCG
GGAGCTCGCCGTCCTCTGCGACGCCGACCTCCTCCTCCTCCTCTTCTCCGCCTCCGGCAAGCTCTACCAGTACCTCGCGC
CCACCGTCCCCTCGTAAGCCAACCGCCTCACCGACCTACCCGCTCAGTTAACCTCTCTTTAAATGTGCTGATTTGTTTGT
ACGCCCGCCCATGCTT-GCTCGCGCATCTCTTGTTC-TTGGCAGTGTCAAGGAGTTTGTCGAGAGGTACGAGGCTGCAAC
GCACACCAAAGTTTGGTCCGACATCCGCCAGGTACGTGCGTTGTACTACTACTTTGCAATGCTTCGATTCAGAGTGATGA
TTGACAGAGGC--------------CCCCTTTTGCATCGAGCAGGAGAGGCGCGCCGAGCTGGAGAAGGTGGCCAAGATG
TGCGACCTCTTGGAGAAGGAGCTGAGGTAAGCGAAG---CATAC---GTACATGGCCGGCCACAGCGCGCGTGGCTGCGC
TGCGCCTGTTCTGATCTCGCTGTGTGTTAATCTGTCTCTAGGTTCATGACGGTGGACGACGGGGAGCAGTACACGGTGCC
GTCGCTGGCGGCGCTGGAGCACAACCTGGAGGCGGCCATGCACAAGGTGCGCTCCGAGAAGGACCGCAAGATCGGGGGCG
AGATGAGCTACCTCGAGAACATGGTGAGTGTGTACTGTACCCCTCTTCGATCGACTCGTTTGCATATTTTTCACTAT---
GCGGTGACTCGCCTAATTAATGTTTTGTTTCGTGCTGCATGCAGATCAGGGGGAAACAAGCTGAGCGCTACGGCCTATGT
GACAAGGTGAGAGCTTT--TAGATTCTTTTCAAGTTCCTGCGGCGTTCATCATTAGTGTTATTATTAACCACATAGGACA
AAAACAGTACCCAGTCAGAAGA-TTTGAAACCCTTAAATGAATCTGAAGCAA----------------------------
--------CTGGTGGTGATTTATA---GTTGCGTGACCATCGGTGGCAGGGTTCCATGATGATGCCTCGGTTGTGCTTAG
TTTTAACCTGAGCTTTCTTTTTTTTTTGCTAGTGTTGTTGAATTGGAGAGCCCC-------------------------A
AACGAAGCAAAAAGGCTTACTCTTGTAGTCATGTTTAGCACTAGTAAC--TCCTTTTA------------GTTGAAAAAC
GGGCACC--ATAGATCACAATGTTTCTCTAGAACAAAAGTCAAGAATTTTAATAC----TACGTACTTGTAGAGCGACTG
TTCCATGGAATAGGACCTTGGTATAGATGCCTGGATATACACAGACCGTGGCAAAAATAGGCGTTTCTTTTTCCCATCTA
CAAAAAATAGGATTCCATCCGAAATG-AAAAAATAGGAGCCTCCATCAAGAGGAGGAGGCGTGTTCGCCCTACTCATGGT
ACCGCTCAGTAAATGGAGTGCTCCATTGCAAGGCACGAAGTGACACAAAGCCTACCGACCTACAACACGTAGACCCGTTC
ATTGCAGCTTCTTTACATTGGAGGTGGAATAACTTTTCACTCCCTGCAAGCAACGGCGTGAGGCTAAGGCCAGGCTAGCC
TACGTGCACCGCA-GGGTAGCCTGCCCAAGCCTATCTGAACTGGACAGCTAGCTACTACT--------------------
--------------------------------------------------------------------CTTTG--GCGCA
TGTAAACTTCTTTACATTTTTCTTACTTTGTTTCTTTCAAGAATGTTTATCAGTCGTCGAGTTTTATGTTCATGATATTT
TGTGCTTCTCACGACCAATCCAGCTGCAATTTGGTTATGTTTATGTAATTTTATTATCCACAGCTCGCTCATGCTCAGAG
CCTGAAGGTCGTGGAAGGCGGATCCACCTCGCTGAACAACGGTCTGGACCTCAAACTTGGTAGGTTCTCCCAGTCGATTC
AGAACCTAGTTACAGTACAAGTAAGTAGCTCGCAGATCTGACGTGTGCCTTGTGCAATGTTTGCAAATGCACGCAGGATT
CAACTAGGAACGGGTGAAAGCTTCTGGCCGTGGGGTTCTGCTCTAGTGTTGCTGTTGAGCTCGAGTGTTATGTCAGGTTC
AAATATTCTGCAATTTCCTTCGAAGGGATTGTATGAACTTGTAAGAGACCACTGTCTTATGAGATGTTTGGCTTAGGCTG
GACTGGGCTGTGCTTTGTACCTCCAATAGGTGGAATGTGATACCAGTCCAGTATTGCAATAATGTAGCTAACGGTCACTT
CATGGCCTCCTTTCATACGTTCTTCGTCAATGTGGACAATTCGTGTTTTTCTCGATTTCTGCTGCTTATTGTGTGATGTT
CTTGATTACGTCTTCATCTCTGTTGATTCCCAGGCATGCTGGCCAGCATCTTCTAATTTTCTGCCGGTCTTTATTTTGTC
TGAACCTGAAAATATAACATGTGCAT------------------------------------------------------
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>chr4D_1943
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----------------------------------------------------------------TTAACCACACAGGACA
AAAACAGTACCCAGTCAGAAGA-TTTGAAACCCTTTAATGAATCTGAAGTAATGGTG---------CTAGTT------GA
AGTAGCAACTGGA-GTGATTTATA---GTTGTATAATCATCATTGGCAGGGTTCCATGATGATGTCTGGGTTGTGCTTAG
TTTTAACCTGAGCATTTTTTTG-------------------------------C-------------------------A
AACGAAGTA----------------TACTCCTTTTTAGCACTAGTAAAAATCCTCATACTCCATGGAGTTGTTGAAAAAC
GTACACC--ATAGATCACACTGTTTC--CTGAACAAAAGTCAAGAAATTTAATAC-------GTACTTGTAGAGCGACTG
TTCCATGGATTCGGACCTTGGTATAGATGCCTGGATATACACAGATCGTAGCCAAAATAAGCGTTTCTTTTTCCCATCTA
CAAAAAATAGGATTCCATCCGAAATAAAAAAATTAGGAGCCTCCATCAAGAGGAGGAGGCGTGCTCGCCCTACTCATGGT
AGCGCTCAGTAAATGGAGTGCCCCATTGCAAGGCACGAAGTGACACAAAGCCTACCGACCTACAACACCTAGAGCCATTC
ATTGCAACTTCTTCCATTG-------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-S-------S---------------------S----
-S------S---------SS------------------SS-S---S------SS-S----SSS-SSSS-S--S--SSS--
-----S------S----------------S----S-----S-SSSSSS------------------S--S----------
---------S------------------------------------------------S---------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S----------------------------------S----------------------
----------------SSSSS-----------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-S--------------------SS-S--SSSSS--S-------S-------SS----
---S------------------S---------S-----------------------------------------------
-----------------------------------------S-------------------------------S-SSS--
S---SSSS-SSSSSSSSSSSSSSSS-------------------------------------------------------
---------------------------S---S-----------SSSS---------------SS--------------S-
-S----S---S-------S---S------------SSS---------------S------------------S-------
--------------------------------------------------------------------------------
----------------------------S---S-S--S----------S----------------------S--------
-----------------------------S--------------------------------------------------
----------------------------------------------------S-S----------------S-S------
----------------------S----------------------------------------------S-SSSSSSS--
--------S---------------SSS-----------------------------------------------------
--SS-SSSSS-S--------------------------------------------------------------------
-------------------S----S----------------S----S---------------------------------
--------------------------------------------------S----SSS----------------------
---S------------------------------------------S---------------------------------
---------------------------------------------------S----------------------------
-----------------------------S--S-----------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------------------------------------------------------------SS---S-
-S---------------------------------------------------S-----------S--------------
---------------------S-------------------------------------------S--------------
--------------------------------------------------------------------------------
---------S-------------------------------------------------S--------------------
-------------S-------------------------------------------------------------S----
----------------------------------S---------------------------------------------
------------------S-----------------S-S-----------------------------------------
-S------------S----------S-----------S----------------------------------S---S---
--------------------------------------------------------------------------------
---S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_148
--------------------------------------------------------------------------------
------------------------------------------------TGAAAGATGTGCCCAGCTGT------------
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>reverse_1795
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----------------------------------GTGCACCCCTCTTCAATCGA--------------------------
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>forward_1548
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--------CTTGGAGAAGGAGCTGAGGC----------------------------------------------------
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>reverse_3214
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-------------ATGAAAGCTTCTGGCCGTGG-----------------------------------------------
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------------------------------------------------
