>input_sequence_40104
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---------ATGGGGCTGCGGACCTGCGGCGCCATGGAAGGCGAGCACGTTGTCGCCTCGCCTTTCTTCGAGTGGTTGAA
GCCGCCGCCGGCGTCGCCGTCCTCGTCGAGATCGTCGTCGACTTTCTCGTCCTCCTCGTCGTCTATGGCGTCTGGGCACC
AAGAGGATC------------------------GCAGCAGCGTGGCATGCTTGCCCCTGCTCCGCATGCTCGAGGAGGGG
AAGGGGGCTGGTGGTGACCATGATCACCCTGCACCTCCAGTCAAGGAAGAGATCATGGGCAGCGGCGCGGCCGAGGTGCT
GGGGCCTGGCGTGGATCTGAATATCGGCTTGCCGGTTGGTGGATCTTGCGATGATGACATCATGGAGGAGGAGA---GCC
AGGAGGAAGATGATGACCACGACTGTGACGAAGAGGAGGAGGAAGAGATGGATGAGTTGGAACCTAACCATGGCGGTTGC
AAGGTGGAGGCAGAGGAGAAAGAGAAGCACGGCGAGCCGGTGGTCTCGGTGGAAGGATCAAACAGCGTCAGCATGCCGGA
ATTCGGCGTGCTCGGAGCAGAGAGCGGCGTGCCCATGAGCTGCGGGTACTGGATCCCGACGCCGGCGCAGATCCTCGTCG
GCCCGGTGCAGTTTGTCTGCCATGTCTGTAACAAGAGCTTCAACAGATACAATAACATGCAGGTAAATTAAATGATGTC-
---TTGCATGCTCTTATATATTACCACTCGCCTGAGTTATTGTTAGTTCTGTTTTCAGTTAAGCCATGATTCGATTGATT
TTGTGATAATATTGGACACGCAAAAGAAAGAAATGATCTAGAAA-----TTTAATCAGCTGGTACA--------AAATTT
AAGTCCAGCGAATGAGAGAACCGAGATCATCTAAGCTTGCTTACATAATTCGCCATGAATCATCAATTCACCATACCATA
GTGTTTTGGTCGC--------CTGCCCCAAATCTTAACCAAGTCTCCACAC-------ACTTGGTTACAAACGAGGAGCA
GCCGAAGCTTCATCGTCGGATCGTTCTACAAAGGCCACACACCATCAAGGACA--CT--AGGTTTCTCGGATAACTAGGT
CAAAAAACCCGGCCGGTAGATCACTGTGAACACCTTGCATGCAG---------------------AACACCGT-----TG
AATGGCCCCGTCGAAGTTGAGCCTGACCTATCCAACACCGGCCACTTTCCCGATGGCATTGCGGGTGTTTGGTGTCTGGA
TGGGACCCAGGGCTCGTCTCCTAGGAGCTCCAAAGCTAATCAAGTGTCAATTTATTCCAAAGAGAAGGCCTGATGGTGAT
CACCAGTACGCCGTCGCGGTAGTAGCCACCTTTCCGCAAAGAACAACTCTGAAACCCAAACATGTATATATGCCC-----
GCCCCGGTGGAGCCCCGAAAGCTTGATATTCAAGATCTCTTTGAGTGCATTTCATGCAATCAATCATGACGAACAACGAA
AATCCACACTAACGATCATGAAAACGCCTATCAAGTGGCTTAAATTTCTAATGTTA--------TACTTTGTTAAGTACT
AATAATCCAGTGTGTGCATGCATAACATGTGTTGATGGATGATGCAGATGCACATGTGGGGCCACGGGCGCGAGTACCGC
AAGGGCCCGGAGTCGCTCAAGGGCACGCAGACGCTGGCGCTCCTGAAGCTGCCGTGCTACTGCTGCGCCGCCGGGTGCCG
GAACAGCGTGGCCCACCCGCGCGCGCGGCCGCTCAAGGACTTCCGCACCCTGCAGACGCACTACAAGCGCAAGCACGGCG
CCAGGCCCTTCCGCTGCCGCCGCTGCGCCAAGCCCTTCGCCGTCAAGGGCGACTGGCGCACGCACGAGAAGAACTGCGGC
AAGCGCTGGTTCTGCGCCTGCGGCTCCGACTTCAAGCACAAGCGCTCGCTCAACGACCACGTCCGCTCATTCGGCGGCGA
CCACCTCCCCGTCGCCCTCGACGGCGCCCCCGCCCCCGCCCCCGCCCCCGTCGAGGACCGCCGCATCATACGCTTCCAAC
GGTGA---------------------------------------------------------------------------
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----------------------
>chr3D_1_TraesCS3D01G364800
AAAAAAGAGAAGAAGTAGCCAACCCAAGTTGGACCGCAATGTGACAATCAACACTGGGTTTGCCTTTTTTGGTTTCTTGT
GGTGCGTTCCAAATCTGGATTTGAGATTTCACCATAGTA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGATGGGCACATGTTTCTACGG
CCTCAGTTTTTCTTTTTTACACCGCAACACTTTTCAGCCAGAGTGAGTGAGGTCGGAGACGATGGGTGCACCAAGTCCCG
GTACATCCACATCCACTATCTA--------CTCTCACTATGCATGTGTATGAAAAAGTCCCAAACAAAAATCAAAAACAT
AGGCTAGGGCTGTCGCGCACATA-----CTAGGTGAGAACACGGCACAGTCCCGTCCTCTGTTTCCTCATCCCCGGTGTA
CACGCGTGTACTGCGCTTGACCCCCCGAATTAAACTCCCACAGACCGCGCACATTCCCGGCATGTGATCCGCAGTCACCA
CCCGCGGCGCCATGTCGCGCATGGACCGCGCCTGTGCAGCTCACGGCGGCAGGGACCATCCCAAGTCTCCAAACCGGGCT
------------CCCCCGCCGCACCTCCCCTGTACACGCACACGATCGTATGGCAGCAGCAGCAGCAGCCGGCGAC-GAC
GGTCCGGGCTCCGCATGCACATTCACACGCCCCCACGGCACGCGCTATCTCGT----CGGCTTTGCCTGATCCGCCCATG
GATCGAGTGTGAAAGCATCGGCGAGAGTTTCAACGCCTACACCCAGGGGTGCAGGCGCAGTACACACAAACGTAAAGGCG
CCCGGTCGAGCTTGTATATAAGCGGCCCCAGGTGGTGGCCGCTTCGTTTTCTTCAAGAACGTGACATGGGCGCACATTGA
CATTAGGCTGCTGCTGCCATTCCTTCCTCTTTCCCCTCCTTCCACATCCCAGTCTTCTCCACCCACGCCACCAAACCCCC
GAGATCACGCGAGCTATATATACTGCATATTCTCCCGGCCCTGCAAAGCGAGGCCTCTATTACTTACTGATATCCCCGCC
GAAATCAAGATGGGGCTGCGGACCTGCGGCGCCATGGAAGGCGAGCACGTTGTCGCCTCGCCTTTCTTCGAGTGGTTGAA
GCCGCCGCCGGCGTCGCCGTCCTCGTCGAGATCGTCGTCGACTTTCTCGTCCTCCTCGTCGTCTATGGCGTCTGGGCACC
AAGAGGATC------------------------GCAGCAGCGTGGCATGCTTGCCCCTGCTCCGCATGCTCGAGGAGGGG
AAGGGGGCTGGTGGTGACCATGATCACCCTGCACCTCCAGTCAAGGAAGAGATCATGGGCAGCGGCGCGGCCGAGGTGCT
GGGGCCTGGCGTGGATCTGAATATCGGCTTGCCGGTTGGTGGATCTTGCGATGATGACATCATGGAGGAGGAGA---GCC
AGGAGGAAGATGATGACCACGACTGTGACGAAGAGGAGGAGGAAGAGATGGATGAGTTGGAACCTAACCATGGCGGTTGC
AAGGTGGAGGCAGAGGAGAAAGAGAAGCACGGCGAGCCGGTGGTCTCGGTGGAAGGATCAAACAGCGTCAGCATGCCGGA
ATTCGGCGTGCTCGGAGCAGAGAGCGGCGTGCCCATGAGCTGCGGGTACTGGATCCCGACGCCGGCGCAGATCCTCGTCG
GCCCGGTGCAGTTTGTCTGCCATGTCTGTAACAAGAGCTTCAACAGATACAATAACATGCAGGTAAATTAAATGATGTC-
---TTGCATGCTCTTATATATTACCACTCGCCTGAGTTATTGTTAGTTCTGTTTTCAGTTAAGCCATGATTCGATTGATT
TTGTGATAATATTGGACACGCAAAAGAAAGAAATGATCTAGAAA-----TTTAATCAGCTGGTACA--------AAATTT
AAGTCCAGCGAATGAGAGAACCGAGATCATCTAAGCTTGCTTACATAATTCGCCATGAATCATCAATTCACCATACCATA
GTGTTTTGGTCGC--------CTGCCCCAAATCTTAACCAAGTCTCCACAC-------ACTTGGTTACAAACGAGGAGCA
GCCGAAGCTTCATCGTCGGATCGTTCTACAAAGGCCACACACCATCAAGGACA--CT--AGGTTTCTCGGATAACTAGGT
CAAAAAACCCGGCCGGTAGATCACTGTGAACACCTTGCATGCAG---------------------AACACCGT-----TG
AATGGCCCCGTCGAAGTTGAGCCTGACCTATCCAACACCGGCCACTTTCCCGATGGCATTGCGGGTGTTTGGTGTCTGGA
TGGGACCCAGGGCTCGTCTCCTAGGAGCTCCAAAGCTAATCAAGTGTCAATTTATTCCAAAGAGAAGGCCTGATGGTGAT
CACCAGTACGCCGTCGCGGTAGTAGCCACCTTTCCGCAAAGAACAACTCTGAAACCCAAACATGTATATATGCCC-----
GCCCCGGTGGAGCCCCGAAAGCTTGATATTCAAGATCTCTTTGAGTGCATTTCATGCAATCAATCATGACGAACAACGAA
AATCCACACTAACGATCATGAAAACGCCTATCAAGTGGCTTAAATTTCTAATGTTA--------TACTTTGTTAAGTACT
AATAATCCAGTGTGTGCATGCATAACATGTGTTGATGGATGATGCAGATGCACATGTGGGGCCACGGGCGCGAGTACCGC
AAGGGCCCGGAGTCGCTCAAGGGCACGCAGACGCTGGCGCTCCTGAAGCTGCCGTGCTACTGCTGCGCCGCCGGGTGCCG
GAACAGCGTGGCCCACCCGCGCGCGCGGCCGCTCAAGGACTTCCGCACCCTGCAGACGCACTACAAGCGCAAGCACGGCG
CCAGGCCCTTCCGCTGCCGCCGCTGCGCCAAGCCCTTCGCCGTCAAGGGCGACTGGCGCACGCACGAGAAGAACTGCGGC
AAGCGCTGGTTCTGCGCCTGCGGCTCCGACTTCAAGCACAAGCGCTCGCTCAACGACCACGTCCGCTCATTCGGCGGCGA
CCACCTCCCCGTCGCCCTCGACGGCGCCCCCGCCCCCGCCCCCGCCCCCGTCGAGGACCGCCGCATCATACGCTTCCAAC
GGTGAGATCGTACGTCGACCGAG----CTAGCTGATCGTACTACA------TAGATCATAT------------ATATGCA
TGCATGCA-----------TGCAGTGCATGCTAGGGTGC---------ATGCAGGAGGAGCAACGAGGTA------AGTG
ATAGCGCAATAA-GGGGGTTCTCGACCAGTTGCTAAAAGCTGTGAAGTAGCTGAATTTTCTTCAGCCGGACTGTGGGAGC
TGCAGGCAGTGCTATTAGCTAGGCTGTCAATGCAGCTTTGTAATGGAGAAAATTTATCAGCTTCACAGGCTAACTAAACT
GGT-ATTTGGACCTAGTACTGTATACATAGCATTTTGAACATGAGACATAGCAATTTATGAGTACGTACAGAACGTTTA-
TTGCCTACTGTAATCGCTGAAGTTTTTGAAATTTTCATTACTGCCATCCCCTGTCTGTTAATTTCTATTGTCTTCAAATG
TGTTGAATTCGTTTTGATTGGTATAACATTTGCGCAATCAATAACTAC-AACAATAGATATATCCTGTATCCTAATAGAG
TAAACAGGTAACTCTGGCATCCAAATATAAATGGAGATTTGCGACATCTGATGAAAGACTTTGATCATGCCTTCTTACAT
CATAACATACTAACAAGAGTACTATAA----ATTCTTCTTATTTATTTGATTCCAGAGTTCAAGCTTTGACAATATTTGG
TTCATTGTTACAAAATGAAAACATAAGAATACGCATTTGAATAAAAAAACACAATACCATTTTTATGTTGCATAAGCCAC
ATATTATCAAGCAATTAAGCTTGGACAAAGACGGTC-AAAGTACACCGTATATTTTTCGAACGGATCGAGTATCTTTCGA
GAAAAATGACTTCATTTTGACTCCTTTATAGATATAGGAAACGTTGTTTATAAACGTTAAGTGACCTTTAAAATATGGCA
TAGTGGATTCCACATTCCCTCAGCCACAAGTTCTATCGTATTTGGTGATGGAAAAATAAATGTGTCCTCTATTTTGGCAG
ATTTAGGCTATTTTTTGTCGTT
>chr3B_13
------------AAGTAGCCAACCCAAGTTGGACCGCAATGTGACTATCAACACTGGGTTTGCCTTTTT-GGTTTCTTGT
GCTGCGTTCCAAATCTGGATTTGAGATTTCACCGTAGTA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGATGGGCACATGTTTCTACGG
CCTCAGTTTTTCT--TTTACACCGCAACATTTTTCAGCCAGAGTGAGTGAGGTCGGAGACGATGGGTGCACCAAGTCCCG
GTACATCCACATCCACCATCTA--------CTCTCACTATGCATGTGTATGAAAAAGTCCCAAGCAAAAATCAAAAACAT
AGGCTAGGGCTGTCGCGCACATA--ATACTAGGTGAGAACACGGCACAGTCCCGTCCTCTGTTTCCTCATCCCCG-----
-----GTGTACTGCGCTTGACCCCC-GAATTAAACCCCCACAGACCGCGCACATTCTCGGCATGTGATCCGCAGTCACCA
CCCGCGGCGCCATGTCGCGCATGGACCGCGACTGTGCAGCGCACGGCGGCAGGGACCATCCAAGG-CTCCAAACCGGGCT
------------CCCCCGCCGCACCTCCCCTGTACGCGCACACGATCGTATGGCAGCAGCAGCAGCCGGCGACGACGGAC
GGTCCGGGCTCCGCATGCACATTCACACGCCCCCACGCCACGCGCTATCTCGT----CGGCTTTGCCTGATCTGCCCATG
GATCGAGTGTGAAAGCATCGGCGAGAGTTTCAACGCCTACACCCAGGGGTGCAGGCGCAGCACACACAAACGTAAAGGCG
CCCGATCGAGCTTGTATATAAGCGGCCCCAGGTGGTGGCCGCTTCGTTTTCTTCAAGGTCGTGACATACGCGCACATTGA
CATTAGGGAGGCTGCTGCCG---TTCCTCTTTCCCCTTCCTCCACATCCCAGTCTTCTCCACCCACGCCACCAAACCCCC
GATATCAAGCTAGCTATATATACTGCATATTCTCCAGTCCCTGCAAAGCGAGACCTGTATTCTAAG--------------
---ATCAAGATGGGGCTGCGCACCTGCTCCTCCATGGAAGGTGAGCTCCTTGTCGCCTCGCCTTTCTTCGAGTGGCTCAA
GCCGCCGGGT---TCGCCGTCCTCCTCGAGATCGTCGTCGACTTTCTCCTCCTCATCATCGTCCATGGCGTCTGGACCAC
ATGCGGAGGACGGAGGTGCCGCTCAGGTAGATGGCAGCAGCGTCGCATGTTTGCCGCTGCTCCGCATGCTCGAGGAGGGG
AAGGGGGCTGGTGGTGACCATGATCACCCTGCACCTGGAGTCAAGGAAGAGATCATGGGCAGCGGCGCGGCCGGGGTGCT
CGGGCCTGGCGTGGATCTGAATATCGGCTTGCCGGTTGGTGGATCTTGCGATGATGACATCATGGAA---GAGGAGGGCC
AGGAGGAAGATGATGACCACGACTGTGACGAAGAGGAGGAGGAGGAGATAGATGAGTTGAAACCTGAGCATGGAGGTTGC
AAGGTGGAGGCAGAGGAGAAAGACGAGCACGGCGAGCCAATGGTCTCGGCAGGAAGATCAAACAGCGTCAGCATGCCGGA
ATTCGGCATGGTCGGAGCAGAGGGCGGCGTGCCCATGGGCTGCGAATATTGGATCCCGACGCCGGCGCAGATCCTCGTCG
GCCCGGTGCAGTTTGTCTGCCACGTCTGTAACAAGAGCTTCAACAGATATAATAACATGCAGGTAAATTAAATGACGTCT
ATTTTGCATGCTCTTATATACTGCCC--CGCCTTAGTTATTGTTGGTTCTGTTTTCATCTAAGCCACGATTCGATTGATT
CTGTGATAATATTGGAGACGCAAAAGA--GAGATGATCTAG-AA-----TTTAATTAGCTGGTAGTAC------AAAATT
AAGTCCAGCGAATGAGAGAACCGAGATCATCTTAGCTCGCTAACATAATTCGACATGAATCATCAATTCACCATATCATA
GTGTTTTGGTCGCCTGCCCGGCTGCCCCAAATCTTAACCAACTCTCCAGTCTCCACATACTTGGTTACAAACGAGGAGCA
GCCGAAGCTTCATCGTCGCATCGTTCTACAAAGGCCACACACCATCAAGGACA--CTCTAGGTTTCCCGGATAACTAGTC
CAAAAAACCCGGCCGGTAGATCGATGTGAACACCTTGCATGCAG--CAGCGAAAATCTATCTCCCAACACCGT-----CG
AATGGCCCCGTCGAAGTTGAGCCTGACCTATCCAACACCGGCCACTTTCCCAATGGCATTGCGGGTGTTTGGTGTCTGGA
TTGGACCCAGGGCTCGTCTCCTAGGAGCTCCAAAGCTAATCAAGTGTCAATTTATTCCAAAGAGAAGGTCTGATCGTGAT
CACCAGTACGCCGTCCCGGTAGTAGCCACCTTTCCGTAAAGAACAACTCTGAAACCCAAACATGTATATATATATACCCG
G-CCCGGTGGAGCCCCGAAAGCTTGATATTCAAGATCTCTTTGAGTGCATTTCATGCAAACAATCATTACGAACAACGAA
AATTCACACCAACGATCATGAAAACGCCTATCAAGTGGCTTGAATTTCCTATGTTATACG----TACTTTGTTAAGTAC-
--TAATCCAGTGTGTGCATGCATAACATGTGTTGATGGATG---CAGATGCACATGTGGGGCCACGGGCGCGAGTACCGC
AAGGGCCCGGAGTCGCTCAAGGGCACGCAGACGCTGGCGCTGCTGAAGCTGCCGTGCTACTGCTGCGCCGCCGGGTGCCG
GAACAGCGTGGCCCACCCGCGCGCGCGGCCGCTCAAGGACTTCCGCACCCTGCAGACGCACTACAAGCGCAAGCACGGCG
CCAGGCCCTTCCGCTGCCGCCGCTGCGCCAAGCCCTTCGCCGTCAAGGGCGACTGGCGCACGCACGAGAAGAACTGCGGC
AAGCGCTGGTTCTGCGCCTGCGGCTCCGACTTCAAGCACAAGCGCTCCCTCAACGACCACGTCCGCTCCTTCGGCGGCGA
CCACCTCCCCGTCGCCCTCGACGGCGCCACCGCCCCCGCCCCCGC------CGAGGACCGCCGCATCATACGCTTCCAAC
GGTGAGATCGTCGACCGGGCCGT----CTAGCTGATCCTACTACA------TAGATCATATCCACGCTCGTATATACGCA
TGCATGCA-----------TGATTTCATCATACATGCAATGCATGCAAATGCAAGAGGAACAACGAGGTACTAGTAAGTG
ATAGCGCAATAA-GGGGGTTCTCGACCAGTTGCTAAAAGCTGTGAAGTAGCTGAATTTTCTTCAGCCGGACTGTGGGAGC
TGCAGGCAGTGCTATTAGCTAGGCTGTCAATGCAGCTTTGTAATGGAGAAAATTTATCAGCTTCACAGGCTAACTAAACT
GGTAATTTGGACCTAGTACTGTATACATCGCATTTTGAACATGAGACCTAGCAATTTATGAGTACGTACATAACGTTTAC
TTGTCTGTTGTAATCTTTGAAGTTTTTGAA-TTCTCATTACTGCCAAACCCCTGTCTG---TTTCTATTGTCTTCAAATG
TATTGCATTCGTTTTGATTGGTATAACATTTGTGCAAGCAATAACTATAAACAATAAATATATCCTAAATCCTAATAGAG
TTAACAGGTAAATCTAGCGTCCAAATATAAGCCGAGATTTGCGATATCCGATGAAAGACTTTGATCATGTGTTCTTACAT
CATAATATACTAACAAGACTACTGTGAAATTATTCTTCTCATTTAATTGATTCCGGAGTTAAAGCTTTGTCAGTACTTGG
TTCATAGTAACAAAATGACAACATAAGAAAGCGGATTTGAATAAAAACATATAGTATCATTTTTATGTCACACAACCCGC
ATATTATCAAGCAATTAATAGAA--CAAAGATGGTCAAAAATATGTCTTATATATTTTGAATTGAACGAGTGTGTTTCAA
GAGAAATGGCTTCATTTCGATACTTTTATAGATATAGCAAACATTGTTTATAATTG-TAAGTGGCATTTGAAACATG---
--------------------CCACCACAAGTTTTATC-TATTTCATGATGGAAAAATAAATGTGTTATCTATTTTGGCAT
ATTTATGCTATTTATTGTC---
>chr3A_56
-------------------------------------------------------GGGTTTGCCTTTTC-GGTTTCTTGT
GGTGCGTTCCAAATCTGGATTTGAGATTTCACCATAGTACTCCCTCCGGTCCTTTTTAGTTCGCATATAAGATTTAACTA
AAGTCAAGCCTCGTAAAGTTTGACCAACTTTATAGAAAAAAGTGCCAACATTCACAATCTGAAATCAATATCAATAAATG
TGTCATGACTTAAAGTTTCATATTGTATAATTTTAGCATGGCAGATGTTGATATTTTTTCATATAAATACGGTCAAACTT
TATGAAGTTTGACTTCAGAGAATTCTAATATGCAGAGTAAAAAGGACCGGAGGGAGTATGACGGGCACATGTTTCTACGG
CCTCAGTTTTTTT--TTTACACCGCAACAC-TTTCAGACAGAGTGAGTGAGATCGGAGACGATGGGTGCACCAAGTCCCG
GTACATCCACATCCACCATCTACTCTCAGTCTCTCACTATGCATGTGTATGAAAAAGCCCCAAACAAAAATCGAAAACAT
AGGCTAGGGCTGTCCTGTCGCGCACATACCAGGTGAGAACAGGGCACATTCCCGTCCTCTGCTTCCCCATCCCCGGTGTA
CACGCGTGTACTGCGCTTGACCCCCC-AATTAAACTCCCACAGACCGCGCACATTCCCGGCATGTGATCCGCAGTCACCA
CCCGCGGCGCCATGTCGCGCATGGACCGCCACTGTGCAGCTCACGGCGGCAGGGACCATCCATGG-CTCCAAACCGGAGC
TAGGTACGCCGCCCCCCGCCGCACTTCCCCTGTACACGCACACGATCATAT------AGCAGCAGCAGACGTCGAC-GAC
GGTCCGGGCTCCGCATGCACATTCACACACCCCCACTCCACGCGCTATCTCGTCGATCGGCTTTGCCTGATCTGCCCATG
GATCGAGTGTGGAAGCACCGGCGAGAGTTTCAACGCCTACACCCAGGGGTGCAGGTGCAGCACACACAAACGTAAAGGCC
TCCGATCGAGCTTGTATATAAGCGGCCCCAGGTGGTGGCCGCTCCGTTTTCTTCAAGAAGGTGACATGGGCGCACATTGA
CATTAGGCAGCTGCTGCCATTCG----TCTTTCCCCTCCTTCCACATCCCAGTCTTCTCCACCCACGCCACCAAACCCCC
GAGATCACGCGAGCTATATATACTGCATATTCTCCCGGCCCTGCAAAGCGAGGCCTCTATTACTTACTGATATACCCGCC
GAAATCAGGATGGGGCTGCGGACCTGCGGCGCCATGGAAGGTGAGCACGTTGTCGCCTCGCCTTTCTTCGAGTGGTTGAA
GCCGCCGCCGGCGTCGCCGTCCTCGTCGAGATCGTCGTCGACTTTCTCGTCCTCGTCGTCGTCTATGGCGTCTGGGCACC
AAGAGGATC------------------------GCAGCAGCGTGGCATGCTTGCCCCTGCTCCGCATGCTCGAGGAGGGG
AAGGGGGCTGGTGGTGACCATAAGCACCCTGCGCCTGCGGTCAAGGAAGAGATCATGGGCAGCGGCGCGGCCGGGGTGCT
GGGGCCTGGCGTGGATCTGAATATCGGCTTGCCGGTTGGTGGATCTTGCGATGATGACATCATGGAGGAGGAGGAGGGCC
AGGAGGAAGATGATGACCACGACTGTGACGAAGAGGAGGAGGAAGAGATGGATGAGTTGGAACCTACCCATGGAGCTTGC
AAGGTGGAGGCAGAGGAGAAAGAGGAGCACGGCGAGCCGGTGGTCTCGGTGGAAGGAACAAACAGCGTCAGCATGCCGGA
ATTCGGCGTGGTCGGAGCAGAGGGCGGCGTGCCCATGGGCTGCGAGTACTGGATCCCGACGCCGGCGCAGATCCTCGTCG
GCCCGGTGCAGTTTGTCTGCCATGTCTGTAACAAGAGCTTCAACAGATACAATAACATGCAGGTAAACTAAATGATGTCT
ATTTTGCATGCTCTTTTAGATTACCACTCGCCTTAGTTATTGTTAGTTCTGTTTTCACTTAAGCCATGATTCGATTGATT
TTGTGATAACCTT-GACACGCAAAAACAAGAGATGATCTAGAATTGTTGTTTAATTAGCTGGTACGTACGTACAAAAATT
AAGT--------TGAGAGAACCGAGATTATCTAAGCTCGCTAGCATAATTCGCCATGAATCATCAATTCACCATACCACG
GTGTTTTGATCTC--------CTGCCCCAAATCTTAACCAACTCTCCACAC-------ACTTGGTTACAAACGAGGAGCA
GCCGAAGCTTCATCCTCGCATCGTTCTACAAAGGCCACACACCATCAAGGAAACTCT--AGGTTTCTCGGATAACTAGGT
CAAAAAACCCGGCCGGTAGATCACTGTGAACACCTTGCATGCAGCGCAGTGAAGATCTATCTCCCATCCCCACACCGCCG
AATGGCTCCGTCGAAGTTGAGCCTGACCTATCCAACACCGGCCACTTTCCCAATGGCATTGCAGGCGTTTGGTGTCTGAA
TGGGACCCAGGGCTCGTCTCCTAGGAGCTCCAAAGCTAATCAAGTGTCAATTTATTCCAAAGAGAAGGTCTGATCGCGAT
CACCAGTACGCCGTCGCGGTAGTAGCCACCTTTCCGCAAAGAACAACTCTGAAACCCAAACATGTATATATGCCC-----
G-CCCGGTGGAGCCCCGAAAGCTTGATATTCAAGATCTCTTTGAGTGCATTTCATGCAAACAATCATTACGAACAACGAA
AATTCACGCTAACGATCATGAAAACGCCTATCAAGTGGCTTGAATTTCTAATGTTATACGTACTTACTTTGTTAAGTAC-
--CAATCCAGTGTGTGCATGCATAACATGTGTTGATGGACG---CAGATGCACATGTGGGGCCACGGGCGGGAGTACCGC
AAGGGCCCGGAGTCGCTCAAGGGCACGCAGACGCTGGCGCTGCTGAAGCTGCCGTGCTACTGCTGCGCCGCCGGGTGCCG
GAACAGCGTGGCCCACCCGCGCGCGCGGCCGCTCAAGGACTTCCGCACTCTGCAGACGCACTACAAGCGCAAGCACGGCG
CCAGGCCCTTCCGCTGCCGCCGCTGCGCCAAGCCCTTCGCCGTCAAGGGCGACTGGCGCACGCACGAGAAGAACTGCGGC
AAGCGCTGGTTCTGCGCCTGCGGCTCCGACTTCAAGCACAAGCGCTCCCTCAACGACCACGTCCGCTCCTTCGGCGGCGA
CCACCTCCCCGTCGCCCTCGACGGCGCCACCGCCCCCGCCCCCGC------CGAGGACCGCCGCATCATACGCTTCCAAC
GGTGAGATCGTCGACCGGGCCGTACGTCTAGCCGATCGTACTACATAGTAGTAGATCATATTCACGCTCGTATATACGCA
TGCATCATGCATGCATGCTTGATTTCATCATACATGCAATGCGTGCAAATGCGAGAGGAGCAACGAG------GTAAGTG
ATAGCGCAATAAGGGGGGTTCTCGACCAGTTGCTAAAAGCTGTGAAGTAGCTGAATTTTCTTCAGCCGGACTGTGGGAGC
TGCAGGCAGTGCTATTAGCTAGGCTGTCAATGCAGCTTTGTAATGGAGAAAATTTATCAGCTTCACAGGCTAACTAAACT
GGTTATTTGGACCTAGTACTGTATACATAGCATTTTGAACATGAGAGATAGCAATTTATGAGTACGTACATAACGTTTAC
TTGTCTGTTGTAATCTTTGAAGTTTTTGAA-TTCTCATTACTGCCAAACCCCTGTCTG---TTTCTATTGTCTTCAAATG
TATTGCATTTGTTTTGATTGGTATAACATTTGTGCAAGCAATAACTATAA-CAATAAATATATCCTAAATCCTAATAGAG
TTAACAGGTAAATCTAGGGTCCAAATATAAGCCGAGATTTGCGATATCCGATGAAAGACTTCGATCATGTGTTCCTACAT
CATAACATACTAACAAGACCACTGTGAAATTATTCTTCTAATTTTATTGATTCCGGAGTTCAAGCTTTGTCAGTATTTGG
TTCATAGTAACAAAATGACAACACAAGAAAGTGGATTTGAATAAAAACATACAGTATCATTTTTATGTCACATAACCCGC
ATATTATCAAGCAATTAATAGAT--CAAAGATGGTC-AAAATACGTATTATATATTTTGAATTGAACGAGTGTGTTTCAA
GAGAAATGGCTTCATTTCGATACTTCTATAGATATAGAAAACATTGTTTATAATTG-TAAGTGACCTTTGAAACGGCGCT
--GTGGATTGCACATTCCCTCCACCACAAGTTTTATC-TATTTCGTGATGGAAAAATAAATGTGCCATGTATTTTGGCAT
ATTTATGCTATTTGTTGTC---
>SNPs
SSSSSSSSSSSS---------------------------------S-----------------------S----------
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-------------SS-----------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S------------------------------S-S-S--------------
--------------------------------------------------------------------S--S--------
-------------------------------------S----------------------------------S-------
------------------------------------------------------------S-------------------
----S---------------------------------------------------------------------------
--------S-------------S---------------------------------------------------------
-------------------------------------------------------------------------S------
-----------------------------------------S--------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------S------------------------------------S------
-------------------------------------------------------------------------S------
-------------------------------------------------------------------------S------
------------------------S-------------------------------------------------------
----------S-----------S--------------S------S-----------------------------------
--------------------------------------------------------------------------------
---------------------------------S-----------------------S----------------------
-------------------------------S-----------------------S---------S-----------S--
-------------------------------------S---S--------------------------------------
-----------------------------------------S--------------------------------------
------------------S-------------------------------------------------------------
------------------------------------------------------------------------------S-
---------------------------------------------------S----------------------------
--------------------------------------------------------------------S-----S-----
--------------------------------------------------------------------------------
-S---------------------------------------------------------S-------S------------
---S-------------------------------------S-------------------------------------S
SS---------------------------------------SSS------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------S-----------
----------------------------S----------------SSSSSS-----------------------------
-----------SSSS--SS-SSS-----------------------------------------------------S---
---------------------SSS-SSSSSSSSSS-SSS--------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---S--SS-------SS-------------S--S------------SS---SSSSSSSSSS-------------------
-S---S--------------------------S----S---------S--------S---------SS------------
-S---------S---S--S-----------SSS-----------S---S--------------------SS---------
------------------S----S-S-------------S-----S--------S--------------S--S-------
-----S--S---------S----------SS--S-------------S-S---S--S-----------SS-----S--S-
------------------SSSSSSS------S--------S---SS-S-----S---S---SS--S-----S-S----S-
--S-----S--------S--SS-S-------------S----S----------SS-S------------S---S-----S
SS-------S-----------SS---------S----S-----S----------------------S------------S
-----S-------S-----SSS
>forward_46
--------------------------AGTTGGACCGCAATGTGACA----------------------------------
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>reverse_1415
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------------------------------------------------------CTCGTCGTCTATGGCGTCTG------
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>forward_1129
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---------------------------------------------------------------------GCGCACATTGA
CATTAGGCT-----------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GATGGCATTGCGGGTGTTTG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_1415
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGTCGACTTTCTCGTCCTCC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_3374
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GTCGACCGAGCTAGCTGATC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
