>input_sequence_40058
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----ATGAGCAGTACCAATCCCCCTTCCGCGACCAGCCATGTTGCCCTCACACGCCATCCGCTGGAGCATGGATGCGGG
CTCTCTGAATGGCGGTCCAGATGCAGAGGAACTGACTCC-ACGAGTTTAAAAAACGGGCTTCTTCAGGTCAGACATCATG
TTTCAGAATCTCTGGGCTCT----TATATCTTTGGTTGCCTCGCGAATTATTGCACGCTTCTGCCAGTTCAATATTGGAG
CAGGGTCAGGGCGGGGGCAGT---AGTTGCCGCGCACAAAAACTAATGATCCGAAAGATGCTCTATTTCTTAATTATATA
TGATGAATGTGCACAGTTCGTGCGTGATCAAAAGCATTATTCTGTGGTG-CTCCAGAATTAGTTACTCTTCGTGACGTGG
ATGGTTTAGTACACCTGCTGTTGGGTGGGCAACATAGGCTGCGGTCGGGGTAGATAC-----------ACCTTCTCTTAA
ATGTTATTTTGAACTCGG-CTCCAATTTCAGCGCCTTACATTGCATACCTTAACCCTTCCTTGCTCGGCCTGAAACCGTC
A----GACAGGTTCAGTGTTTGGGGCATAGTTTTTGTTGGCCGAAACAAGAGACAGTGCACC-----TAGCAGAGTTGCC
TGGCTTCTTGAGATATATCCAAATTAGGCAACCAACTAACGCGATTCGAA---ATCATGAGAGTGAAGCAAGCATGCATG
CCCATTGTCTAGAGATCAGCCAACCGAATCAGTATACTACTCCCTCCGTTCCTAAATATAAGTCTTTGTAGAGATTTCAC
TATGAATCACATACGGATGTATTTGGATGCATTTAGAGTATAGATGCACTCATTTTGCTCCGTATGTGGTCCATAGTGGA
ATCTCTCCAAAGACTTATATTTAGGAACGGAGGGAGTAGTCAGGATCTGGATCTCGTTTAGGTTTCAGCATAACAAAACC
AAGCGATAACCGGTGAGTCATCAGGAACGGAGCGGATGAGATCGAGCGAGGTTGTTTAGTTAGCG-CCCTAATCCTCCTA
ATCACTCACACCTGCGTTTGACTTGCCTGATGCTTGGCATTTTTAATCAGATGAGGGTGCTGATCATCATCATCATCATC
TGCCCTGGCCCTGGGGTCACAGTGCTCGGCTCAATTGCGGCATGTGCAACATGTACTAGTATAATTCTGGGGACCC-GGG
AATCGAATTACAAAACTTGGG----GATTATTGATTGGTTTGGATAGTATTCTGTTCTGCTTCGCGTAGGCCAGCGCTGC
GCCACCGGCTCTCGAGATTTGGTTAGATCTCCTCCCTTTC-TTTTTCTTTCTGTACTTTGTACTTTGCCTC-------CT
TTTCTTGCGGTTCTGTTCTACTCCGTGGGATGGACGGCCCCTCGCTAACCACCCC---TGTATATATAAAACCGCTGCTT
CCTGTTGCCACCTTGCCCAGCTGATTAAGCTACTTACTTGTCAACCAAATCAACAGGCATCAGCT---CCATCCATCCCC
TTGTGCTGCCTCTGCCCGATGTCGACGACGGTGCAGGAGCCGCCGCACGTCCTGGCCGTGGACGACAGCCTCGTCGACCG
CGTCGTCATCTCCAGGCTCCTCCGCAGCTCCAAGTACAGAGGTA-----CCGCTTCATCCCATTCCATGACTGAATCTGA
ACTGAGAAGAAATGAGCCTTGAATGAACT----------GGACTGAAACTTCTTTCTAATTTGTGCAGTGACGACGGTGG
ACAGCGGGAAGAAGGCGCTGGAGGTGCTGAGCCTGGGCCACGAGAGCGTGCAGCTGATCATCACGGACTACTGCATGCCG
GAGATGACCGGCTACGACCTGCTGAAGCGGGTCAAGGAGTCGGCAGAGCTGCGCGGCATCCCGGTGGTGATCATGTCGTC
GGAGAACTCGCCGTCCAGGATCCGCCGGTGCCTCGACGAGGGCGCGGAGGAGTTCCTCATCAAGCCGGTGCGCCCCTCCG
ACGTCTCCCGCCTCTGCAACCGGGCCATCGCCGCCATGCCCATGCGGTAG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr6D_1_TraesCS6D01G401600
TTTGATTCTGATAAGGTCCAGTACTAGTAAACTATAGTTCGGTCCAAACTAGTTTGTCTACTTGTCATATATATGAAATT
TGGGTGTATTTCTGTGATTTGTGTGATTGATAGGATATCCTGAGAACTGTCAGTCTGTCACCACTCACCCTAGATGAACC
ATGTTTAATGAGGCTTGTCTGGTTTGTCAGTACTTGTCTGATACTCCCTCTGTAAACTAATATAAGAGTGTTTAGATTAC
TAAAGTAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTACAATGCACTCTGATTGATTAACTCTCAGTTGTGC
ATCATTGCGTTCATGCCACCAGCTGTCAATGAACTGTTACAATCTCGTGGTTTTCGGTCGGCGGATCATGGTAGATGCTT
CAGATCACAGTGACATGGTTGACTTGCATAGAGTATCGATCCCAAACTTTAATTTTTTTTGTC-----------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AATCT
TACGTAGTGCTGTGGTTAACTGTATGTCAACCCATTAAATCTTTTGGATGATAATGCTTGATGTGAACAGCCTGAAATCA
GGGACCTCATGTGCTCCATGATGCCATCTGTCTGATGAAAGATGTGCCTTGTCATGCAGGCAGTGTAGTCTGAGTTCGTA
TATTTTTCGAAAGCAAACCCACAATAGGTGCCCT---------------------------------CGGAGTTGAAGGA
CTCTGATAGTAAGCAATGTGCCACGAACTCGGTATATTGCATCAGTTTTCCTGTAGATTATATTTTTCAGGTCCTAAATT
TGTACCATCTTCATTTGAGTGCATGTACCACATCACATGGTTGACATTTAGCCTTGTAGTTCTTATGTTTACCAGAAGCA
ACAGCTGAATTGCGTTTCTCTTGAGTTTACCTTATTGCTTCTGTTCTTTTGATGTTTACGCAGGAGCAGCGGCTCGTGCA
TGGACAGCTAACACCTGTACGCTTCTGAATATGAGCCAGTAAAATACCCCGGAAAGAAATAAAAGTTGTGCAGCTCCCAA
GATCAATGAGCAGTACCAATCCCCCTTCCGCGACCAGCCATGTTGCCCTCACACGCCATCCGCTGGAGCATGGATGCGGG
CTCTCTGAATGGCGGTCCAGATGCAGAGGAACTGACTCC-ACGAGTTTAAAAAACGGGCTTCTTCAGGTCAGACATCATG
TTTCAGAATCTCTGGGCTCT----TATATCTTTGGTTGCCTCGCGAATTATTGCACGCTTCTGCCAGTTCAATATTGGAG
CAGGGTCAGGGCGGGGGCAGT---AGTTGCCGCGCACAAAAACTAATGATCCGAAAGATGCTCTATTTCTTAATTATATA
TGATGAATGTGCACAGTTCGTGCGTGATCAAAAGCATTATTCTGTGGTG-CTCCAGAATTAGTTACTCTTCGTGACGTGG
ATGGTTTAGTACACCTGCTGTTGGGTGGGCAACATAGGCTGCGGTCGGGGTAGATAC-----------ACCTTCTCTTAA
ATGTTATTTTGAACTCGG-CTCCAATTTCAGCGCCTTACATTGCATACCTTAACCCTTCCTTGCTCGGCCTGAAACCGTC
A----GACAGGTTCAGTGTTTGGGGCATAGTTTTTGTTGGCCGAAACAAGAGACAGTGCACC-----TAGCAGAGTTGCC
TGGCTTCTTGAGATATATCCAAATTAGGCAACCAACTAACGCGATTCGAA---ATCATGAGAGTGAAGCAAGCATGCATG
CCCATTGTCTAGAGATCAGCCAACCGAATCAGTATACTACTCCCTCCGTTCCTAAATATAAGTCTTTGTAGAGATTTCAC
TATGAATCACATACGGATGTATTTGGATGCATTTAGAGTATAGATGCACTCATTTTGCTCCGTATGTGGTCCATAGTGGA
ATCTCTCCAAAGACTTATATTTAGGAACGGAGGGAGTAGTCAGGATCTGGATCTCGTTTAGGTTTCAGCATAACAAAACC
AAGCGATAACCGGTGAGTCATCAGGAACGGAGCGGATGAGATCGAGCGAGGTTGTTTAGTTAGCG-CCCTAATCCTCCTA
ATCACTCACACCTGCGTTTGACTTGCCTGATGCTTGGCATTTTTAATCAGATGAGGGTGCTGATCATCATCATCATCATC
TGCCCTGGCCCTGGGGTCACAGTGCTCGGCTCAATTGCGGCATGTGCAACATGTACTAGTATAATTCTGGGGACCC-GGG
AATCGAATTACAAAACTTGGG----GATTATTGATTGGTTTGGATAGTATTCTGTTCTGCTTCGCGTAGGCCAGCGCTGC
GCCACCGGCTCTCGAGATTTGGTTAGATCTCCTCCCTTTC-TTTTTCTTTCTGTACTTTGTACTTTGCCTC-------CT
TTTCTTGCGGTTCTGTTCTACTCCGTGGGATGGACGGCCCCTCGCTAACCACCCC---TGTATATATAAAACCGCTGCTT
CCTGTTGCCACCTTGCCCAGCTGATTAAGCTACTTACTTGTCAACCAAATCAACAGGCATCAGCT---CCATCCATCCCC
TTGTGCTGCCTCTGCCCGATGTCGACGACGGTGCAGGAGCCGCCGCACGTCCTGGCCGTGGACGACAGCCTCGTCGACCG
CGTCGTCATCTCCAGGCTCCTCCGCAGCTCCAAGTACAGAGGTA-----CCGCTTCATCCCATTCCATGACTGAATCTGA
ACTGAGAAGAAATGAGCCTTGAATGAACT----------GGACTGAAACTTCTTTCTAATTTGTGCAGTGACGACGGTGG
ACAGCGGGAAGAAGGCGCTGGAGGTGCTGAGCCTGGGCCACGAGAGCGTGCAGCTGATCATCACGGACTACTGCATGCCG
GAGATGACCGGCTACGACCTGCTGAAGCGGGTCAAGGAGTCGGCAGAGCTGCGCGGCATCCCGGTGGTGATCATGTCGTC
GGAGAACTCGCCGTCCAGGATCCGCCGGTGCCTCGACGAGGGCGCGGAGGAGTTCCTCATCAAGCCGGTGCGCCCCTCCG
ACGTCTCCCGCCTCTGCAACCGGGCCATCGCCGCCATGCCCATGCGGTAGCAACGGCCGGTCG------------GTGCC
GTGCTGCTGATCGGTGCTAGCCTGCTAGCTTGCTAATCCAATCCTCCCTCCCTCC----TCTGCTGAGTTCTCACTGACG
AGATATCCCCATGTACATGCGTCTGCTGCAGGGTTGCATC------CCATGGTGAAATCAAAACTGAATGAATTCCATGA
CAACCCACGGAATGTATGTATTCC-----TTACTTGCCAATGTATGAAATCCACCACTAACTGTGAAACAGTAAAGCGGC
AGGCCACCAATCAATTCAAAGAATCTGATTGAGCAATTGTTGGAATTGGTTTACAAAGTATT---AAATTTGGAAGAATT
AAAATGAAAAAACAAGTACACACA--------------------------------------------------------
----------------------------TAGCATTTTGATATTATTATCATCATCCAAAACCACCTTTTTTTT-------
---TTTGCGGGCATCCTCTAAAACTACTTCAATGCAATTCAGGAACTAAATTGCT-------------------------
--------------------------------------------------------------------------------
----------------------------TTAGGAGGGGTTACGCTATGCCAAGCCTAACCTACAATTAAGAGGGGGGTCT
AAGCCCTAGGTAGGTTTGATGCCTCGCTTCCATCCATAGCGAGGCTTTTGTGGTGACTTTGTTAATTTTGAAGTTTTGGA
ACTTGAGGTTGCGATGTGTGGTTATGTCTATATCTGTACTCCGGT----CAAAAGCTAAATAGAGCACGTACTAGCTCTT
TGCCGCGAGAAATGCTACCCAAATCAAATCAGGTGAATATATACCGGATAAATGAACAGAGTTTTCTATAGATATCATGG
CTTGTTGTGTACACAAACAAAGTAACAGTGAATATGTACTTCCTCCGGTCCTTCTTACTTTCGCATATAAGTTTTGTCTG
AAGTAAAGATTGATCAATTTATAGGAGAAAATTCTAACATCCACAATACGAAATCAATATCATTAGATGCAACATTGTTT
G-GATTTCAATAAATATGATCAAATTTTACGAAGTTTGACTTCAGACAAATCTTATATGCGGAGTAAAAAGGACAGTAAA
TCTGAGGAAATCAAAAGACAATATTAGAGGCT
>chr6B_1
TTTGATTCTGATAAGGTCCAGTACTAGTAAACTATAGTTCGGTTCAAACTAGTTTGTCTACTTGTCATATATATGAAATT
TGGGTGTATTTCTGTGATTTGTGTGATTGATAGGATATCCTGAGAACTGTCAGTCTGTCACCACTCAACCTAGATGAACC
ATGTTTAATGAGGCTTGTCTGGTTTGTCAGTACTTGTCTGATAC------------------------------------
-----------------------------------------------AATGCACTTTGATTGATTAACTCTCAGTTGTGC
ATCATTGCGTTCATGCCGCCAGCTGTCAGTGAACTGTTACAATCTCGTAGTTTTTGGTCGGCGGATCATGGTAGATGCTT
CAGATCACAGTGACATGGTTGACTTGCATAGAGTATCGATCCCAAACTTTAAATTTTTTTTGTCAGTGGTAAAGCTGCTG
CCTTGTGACCATGAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGCAGAAATGTAGGGAAAGGCTGCGTACAATAGA
CCCAAAGTGGTCGGACCCTTCCCCAGACCCAGCGCAAGCGGGAGCTACATGCACTGGGGCTGCCCTTTTTTTTTTAATCT
CACGTAGTGCTGTGGTTAACTGTATGTCAACCCATTAAATCTTTTGGATGATAATGCTTGATGTGAACAGCCTGAAATCA
GGGGCCTCATGTGCTCCATGATGCCATCTGTCTGATGAAAGATGTGTCTTGTCATGCAGGCAGTGTAGTCTGAGTTCGTA
TATTTTTCTAATGCAAACCCACAATAGGTGCCTTCGGAGTTGAAGGACTCCAATAGTAAGCAATGTGCGGAGTTGAAGGA
CTCTGATAGTAAGCAATGTGCCACAAACTCGGTATATTGCATCAGTTTTCCTGTAGATTATATTTTTCAGGTCCTAAATC
TGTACCATCTTCATTTGAGTGCATGTACCACATCACATGATTGACATTTAGCCTTGTAGTTCTTACGTTTACCAGAAGCA
ACAGCTGAATTGCGTTTCTCTCGAGTTGACCTAATTGCTTCTGTTCTTTTGATGTTTACGCAGGAGCAGCGGCTCGTGCA
TGGACAGCTAACGCCTGTACGCTTCTGAATATGAGCCAGTAAAATACCCCGGAAAGAAATAAAAGTTGTGCAGCTCCCAA
GATCGATGAGCAGTACCAATCCCCCTTCCGCGACCAGCCATGTTGCCATCGCACGCCATCCGCTGGAGCATGGATGCGGG
CTCTCTGAATGGCAGTCCAGATGCAGAGGAACCGACTCC-ATGAGTTTAAAAAAGGGGCTTCTTCAGGTCAGACATCATG
TTTCAGAATCTCTGGGCTCTTATATATATCTTTGGTTGCCCCGCGAATTATTGCACGCTTCTGCCAGTTCAATATTAGGG
CAGGGTCAGGGTGGGGGGAGTAGTAGTTGCCGCGCACAAATACTAATGATCCGAAAGATGCTCTGTTTCTTAATTATATG
C--TGAATGTGCACAGTTCGTGCGTGATCAAAAGCATTATTCTGTAGCGCCTCCAGAATTAGCTACTCTTCGCGACGTGG
ATGGTTTAGTGCACCTGCTGTTGGGTGGGCAACATAGGCTGTGGTCGGGGTAGATAC-----------ACCTTCTCTTCA
ATGTTATTTTGAACTCGG-CTCCAATTTCAGCGCCTTACATTGCATACCTTAACCCTTCCTTGCTCGGCCTGAAACTGTC
GACAG-----GTTCAGTGTTCGGGCCATAGTTTTTGTTGGCCGAAACAAGAGACAGTGCACCGCACCTAGCAAAGTTGCC
CGGCTCCTTGAGATGTATCCGAATTAGGCAACCAACTAGCACGATATGAAATCATCATGAGAGTGAAACAAGCATGCATG
CCCATTGTCTAGAGATCAGCCTACCAAATCAGTATAC-------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TAGTCAGGATCTGGATCTCGTTTAGGTTTGAGCATAACAAAACC
AAACGATAACCGGTGAGTCATCAGGAACGGAGCGGATGAGATCGAGCGGGGTTGTTTAATTAGCCCCCCTAATCCTCCTA
ATCACTCACACCTGCGTTTGACTTGCCTGATGCTCAGCATTTTTAATCAGATGAGGGTGCTGATCATCATCATCATCATC
TGCCCTGGCCCTGGGGTCACAGCGCTCGGCCCAATTGCGGCATGTGCAACATGGACTAGTATAAT-CTGGGGACCCGGGG
AACCGAATTACAAAACTTGGGGATTGATTATTGATTGGTTTGGATAGTATTCTG-----CTTTGCGTAGGCCAGCGCGGC
GCCACCGGCTCTCCAGATTTGGTTAGATCTCATCCATTTC-TTTTTCTTGCTGTATTTTGTACTTTGCCTC-------TT
TTT--TTGGGTTTTATTCTACTCCGTG----GGACGGCCC-TCGCTAACCACCCTGTATGTATATATAAAACCGCTGCTT
CCGGTTGCCACCTTGCCCAGC----TAAGCCACTTACTTGTCAACCAAATCAGCAGGCATCAGCTTCTCCATCCATCCCC
TTCTGCCGCCGCTGCCCGATGTCGACGACGGCCCAGGAGCCGCCGCACGTCCTGGCGGTGGACGACAGCCTCGTCGACCG
CGTTGTCATCTCCAGGCTCCTCCGCAGCTCCAAGTACAGAGGTACTGTTCCATCCCATCCCATCCCATGACTGAATCTGA
ACTGAGAGC---TGAGCCTTGGATGAACTGAACTCAACTGAACTGAAACTTCTTCTTAATTTGTGCAGTGACGACGGTGG
ACAGCGGGAAGAAGGCGCTGGAGGTGCTGAGCCTGGGCCGCGAGAGCGTGCAGCTGATCATCACGGACTACTGCATGCCG
GAGATGACCGGCTACGACCTGCTCAAGCGGGTCAAGGAGTCGGCGGAGCTGCGCGGCATCCCGGTGGTGATCATGTCGTC
GGAGAACTCCCCCGCCAGGATCCGCCGGTGCCTCGACGAGGGCGCGGAGGAGTTCCTCATCAAGCCCGTGCGCCCCTCCG
ACGTCTCCCGCCTCTGCACCCGGGCCATCGCCGCCATGCCCATGCGGTAGCAACGGCCGGTCG------------GTGCC
GTGCTGCTGATCGGTGCTAGTCTGCTAGCTTGCTAATCCAATCCTCCCTCCCTCCCTCCTCTGTTGAGTTCTCACTGACG
AGATAATCCCATGTACATGCGTCTGCTGCAGGGTTGCATTCCAATTCCATGGTGAAATCGAAACTGAATGAATTCCATGG
CAACCCACGGAATGTATGTATGTATTCCTTTACTTGCCAATGTATGAAATCCACCAATAACTGCGAAACAGTAAAGCGGC
AGGCCAGCAATCAATTCAAAGAATCTGGTTGAGCAATTTTTGGAATTGGTTTACAAAGTATTTTTAAATTTGGAAGAGCT
AGAATGAAAAAACAAGTACACACATACTCCCTCCGTTCCAAAATAGATGACCCAACTTTGTACTAACTTTGCACTAAAGT
TGAGTCATCTATTTTAGAACGGAGGGAGTAGCATTTTGATATTATTAC---CATCCAAAACCACCTTTTTTTTCCTTTTT
CTTTTTGCGGGCATGCTCTAAAACCACTTGAATGCAATTCAGGAACTAAATTTGCTTTAGGCTTCGTTCGGTTACACCCC
CTCCACAGGGGATTGGGGTGGATTGGAGGGGATTTTGACTTGTAGAGGGTGCAATCTCTGCCAATCCCTGCCAAACCCCT
CCATTTTCCCTGTCAACCGAACAAGCCCTTAGGAGGGATGACCCTATGCCAAGCCTAACCTACAATTAAGGGGTGTAATT
AAGCCCTAGGTAGGTTTGATGCCACGCTTCCGTCCATAGCGAGGCTTTTGTGGTGACTTTGTTAATCTTCAAGTTTTGGA
ACTTGAGGTTGCGATGTGTGGCTATGTCTATATCTGTACTCCGGTTCCTCAAAAGCTAAATAAAGCATGTACTAGCTCTT
TGCTTTATAGGAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AAAATTCTAACATTCACAATACGAAATCAATATCATTAATATGTGCCATTAAT
TTGATTTCAATAGATATGATCAAATTTTATGAAGTTTGACTTTAGACAAATCTTATATGCGGAGTAAAAATGACAGTAAA
TCCAAGGAAATCAAAAGACAATATTAGAGGCT
>chr6A_24
-----------------------CTAGTAAACTATAGTTCGGTTCAAACTAGTTTGTCTACTTGTCATATATATGAAATT
TGGGTGTATTTCTGTGATTTGTGTGATTGATAGGATATCCTGAGAACTGTCAGCCTGTCACCACTCGCTGTAGATGAACC
GTGTTTAATGAGGCTTGTCTGATTTGTCAGTACTTGTCTGATAC------------------------------------
-----------------------------------------------AATGCACTTTGATTGATTAACTCTCAGTTGTGC
ATCATTGCGTTCATGCCACCAGCTGTCAATGAACTGTTACAATCTCGTGGTTTTTGGTCGGCGGATCATGGTAGATGCTT
CAGATCACAGTGACATGGTTGACTTGCATAGAGTATCGATCCCAAACTTTAATTTTTTTTGTC-----------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AATCT
CACGTAGTGCTGTGGTTAACTGTATGTCAACCCATTAAATCTTTTGGATGGTAATGCTTGATGTGAACAGCCTGAAATCA
GGGACCTCATGTGCTCCATGATGCCATCTGTCTGATGAAAGATGTGTCTTGTAATGCAGGCAGTGTAGTCTGAGTTTGTA
TATTTTTCTAATGCAAACCCACAATAGGTGCCCT---------------------------------CGGAGTTGAAGGA
CTCTGATAGTAAGCAATGTGCCACAAACTCGGTATATTGCATCAGTTTTCCTGTAGATTATATTTTTCAGGTCCTAAATT
TGTACCATCTTCATTTGAGTGCATGTACCACATCACATGGTTGACATTTAGCCTTGTAGTTCTTATGTTTACCAGAAGCA
ACAGCTGAATTGTGTTTCTCTTGAGTTGACCTTATTGCTTCTGTTCTTTTGATGTTTACGCAGGAGCAGCGGCTCGTGCA
TGGGCAGCTAACACCTGTACGCTTCTGAATATGAGCCAGTAAAATACCCCGGAAAGAAATAAAAGTTGTGCAGCTCCCGA
GATCGATGAGCGGTACCAATCCCCCTTCCGCGACCAGCCATGTTGCCATCACACGCCATCCGCTGGAGCATGGATGCGGG
CACTCTGAATGGCAGTCCAGATGCAGAGGAACTGACTCCCACGAGTTTAAAAAATGGGCTTCTTCAGGTCAGACATCATG
TTTCAGAATCTCTGGGCTCTTATAT----CTTTGGTTGCCCCGCGAATTATTGCACGCTTCTGCCAGTTCAATATTGGAG
CAGGGTCGGGGTGGGGGCAGT---AGTTGCCGCGCACAAAAACTAATGATCCGAAAGATGCTCTATTTCTTAATTATATG
C--TGAATGTGCACAGTTCGTGCGTGATCACAAACATTATTCTGTGGTG-CTCCAGAATTAGTTACTCTTCGCGACGTGG
ATGGTTTAGTACACCTGCTGTTGGGTGGGCAACATAGGCTGTGGCCGGGGTAGATATATGATGCACAAACCTTGTCTTAA
AGGTTCTTTTGAACTCTGTCTCCGATTTCAGCGCCTTACATTGCTTACCTTAACCCTTCCTTGCTCGGCCTGGAACGGTC
GACAGGACAGGTTCAGTGTTTGGGCCATAGTTTTTGTTGGCCGAAACAAGAGACAGT-----GCACCTAGCAAAGTTGCC
CGGCTCTTTGAGATGTATCCGAATTAGGCAACCAACTAGCGCGATATGGA---ATCATGAGAGTGAAGCAAGCATGCATG
CCCATTGTCTAGAGATCAGCCTACCGAATCAGTATAC-------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TAGTCAGGATCTGGATCTTGTTTAGGTTTGAGCATAAGAAAACC
AAGCGATAACCGGTGAGTCATCAGGAACGGAGCGGATGAGATCGAGCGAGGTTGTTTAGTTAGCG-CCCTAATCCTCCTA
ATCACTCACACCTGCGTTTGACTTGCCTGATGCTTGGCATTTTTAATCAGATGAGGGTGCTGATCATCATCATCATCATC
TGCCCTGGCCCTGGGGTCACAGTGCTCGGCTCAATTGCGGCATGTGCAACATGTACTAGTATAAT-CTGGGGACCC-GGG
AATCGAATTACAAAACTTGGG----GATTATTGATTGGTTTGGATAGTATTCTGTTCTGCTTCGCGTAGGCCAGCGCTGC
GCCACCGGCTCTCCGGATTTGGTTAGATCTCATCCCTTTGTTTTTTCTTGCTGTACTTTGTACTTTGCATTGCCTCCTTT
TCT--TGGGGTTCTATTCTACTCCGTG----GGACGGCCCCTCGCTAACCGCCCC---TGTATATATAAAACCGCTGCTT
CCTGTTGCCACCTTGCCCAGC----TAAGCCACTTACTTGTCAACCAAATCAACAGGCATCACCTT---CATCCATCCCC
TTCTGCTGCCTCTGCCCGATGTCGACGACGGTGCAGGAGCCGCCGCACGTCCTGGCCGTGGACGACAGCCTTGTCGACCG
CGTCGTCATCTCCAGGCTCCTCCGCAGCTCCAAGTACAGAGGTA-----CCACCTCATCCCATTCCATGACTGAATCTGA
ACGGAGAAGAAATGAGCCTTGAATGAACT----------GAACTGAAACTTCTTCCTAATTTGTGCAGTGACGACGGTGG
ACAGCGGGAAGAAGGCGCTGGAGGTGCTGAGCCTGGGCCACGAGAGCGTGCAGCTGATCATCACGGACTACTGCATGCCG
GAGATGACCGGCTACGACCTGCTCAAGCGGGTCAAGGAGTCGGCGGAGCTGCGCGGCATCCCGGTGGTGATCATGTCGTC
GGAGAACTCCCCCACCAGGATCCGCCGGTGCCTCGACGAGGGCGCGGAGGAGTTCCTCATCAAGCCCGTGCGCCCCTCGG
ACGTCTCCCGCCTCTGCAGCCGTGCCATCGCCGCCATGCCCATGCGGTAGCAACGGTCGGTCACGGCGCCGGCGTGTGCC
GTGCTGCTGATCGGTGCTAGTCTGCTAGCTTGCTAATCCAGTCCT-CCTCCCCCC----TCTGTTGAGTTCTCACTGACG
AGATAATCCCATGTACATGCGTGATGCGTGTGCTGG--------TTGCATGGTGAAATCAAAACTGAATGAATTCCATGG
CAATCCACGGAATGTATGTATTCCA------ACTTACCAAGGTATGAAATCCACAACTAATGGTGAAACAGTAAAGCGTT
AGGCCAACAAT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>SNPs
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------S--S--------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
----S------------------------------------------S--------------------------------
-------------S----------------------------------------S-------------------------
----------------------------------------S---------------------------------------
-----------S-------------------------------------------------------------------S
SSS---------------------------------------------------------------------S-------
-----------------------------------------S--------------------------------------
----------------------------------------------------------------------------S---
S-----------------------S-----------------------------------------------S-------
S----S--------S-----S-----------------S------SS---------------------------------
---------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-------------S-----------------S-----------------S----------------------------S-
---SS--S------S------------SSSS-------------------------------------------------
---------------------SSSS-----S-------------------------------------------------
--S-----------------------------------------------------------------------------
---------------------------------------------------S-S--------------------------
----------------------------------------S-------------S-------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------S-----------------------------------
---------S--SS----------------------------------------------------S-------------
------------------S-------------------------------------------------------------
--------------------S------------------------------------------S----------------
-----SS--------------------------------S---------------------------------------S
--------------------------------------------------------------------------------
------S--------------------S----------S--------------------------------------SS-
-S------------------------------------------------------------------------------
-----------------------------------------------SSSS-----------------------------
--------------S---------S----S----------------------SSS-------------------------
--------------------------------------------------------------------------------
-------------------------------------S-S--S---------------------------S--S-SSSS-
-----------------------S-------S----------------------------------S--S----------
---------------------S----------------------------------------S----S------------
---SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S------------------------SSSSSSS-SS-SSS-
S-----------S----------------S------------S---------------------------S---------
--SS----------------------------
>forward_296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGGAGGGAGTACAATGCACTC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>reverse_1335
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CGGGCTTCTTCAGGTCAGAC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>forward_1205
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TTGTGCAGCTCCCAA
GATCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>reverse_2054
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TTTGCTCCGTATGTGGTCCA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>forward_1886
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GGCAACCAACTAACGCGATT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>reverse_3813
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------GCTTTAGGAGGGGTTACGCT--------
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