>input_sequence_40057
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GTATATAAAACCACACCTTCCAC-------------CCTGCCGCCGCCGCCTC
TCACTCGCGCCGCTGCCGTAGCTAG-AATCCCTGCGAAGAGGAAGCACCTCGGGCATCAGCAGCAATCATGGCGGACGCG
AAGACGGCGCCTGCGGTGACTCTCCGCACCCGTAAGTTCATGACGAACCGTCTCCTCTCACGCAAGCAATTCGTGCTCGA
GGTGATCCACCCCGGCCGCGCCAACGTGTCCAAGGTGCGCCCTCCATACTGCCAAGATCGTTGTCATCTTTGGGCTCGTT
GATTTTCGATGCGAGTTTAGGCTGATCCGCGTATGTCGCAGTCGGATCTCAAGGAGCGTCTGGCCAAGATTTATGAGGTG
AAGGACTCGAACTGCATCTTTGTGTTCAAGTTCCGCACCCACTTTGGAGGCGGCAAGTCCACCGGCTTCGGCCTCATCTA
CGATAACCTCGAGGCTGCCAAGAAGTTCGAGCCCAAGTACAGGCTGATCAGAGTATGCCTCTCTTGCTTCATTCATCCCA
CCCTTATCTG--CTCTGAATCCTTGGGTCTCCATATTTATTTTACTGTTATCTCATAATAAGCTTTGATCTTGTCCTATT
GTAGCCTTTGTATAATGCATTTAGTCAATTTTGTGCTCTCATCCTTGAGTCAGTATAATAAGCTCTGATCAGGGTACTTG
TAGTTCCAATATTAGTTGTCTTATCTTGGATAAAAAAACACTTGCCAAGTCTTGCTGCCACTGCATGGTGGCAAATAAAT
CCATTTCTTGGCCGATCTTGTTTTCTGATTTTTGTATAATAGGCACATATCTAGAAATGGACACTCTAATAGCAATATCG
GTTACC-TTGCTTCAATCCACCTTCAACCAATTGGGGCCTTCGGATTTGCCAGAATTTATTTCAAAATGCGGGTGATACT
GTGCCACACTTGATGTTCCTGTTAACTGTAGCAATTTTAGAACTGATGACAGTCGATCTTTGATGTAAGATAATGATAGC
TTTTGCTCAAAGCAAAACGCTTGCAGTTTCTGCATTTGTGTTGTATGTTTCTGTTGTTGTGCTAGAAAGTCTGTCTGACA
CAATTTTGCATGTATCCGAGCATGAGCCATGATCTGTCATGGCTATAATGACGTGCTGCCAGCCTTGTGATGCTACTCTT
TTTGTCGAGCAGCTCATTTATATTAATTTCCATTATTTCCATTATTTTCATTGTTTATGCTTTACTGAGATGAAGCACTT
CAAAATTTTGTCCGCCAACTTCTAAATTTCTGTTCATCAGCATGTGCTCTAAACAATAACATCATTTTTTCTGCGACCAC
ACTTACGAGAATTAAGGATGTCAGGTTCTCATTTTCTTATAATTATTCTTGCTCTTCTGCAGAACGGGCTAGCCACCAAG
GTAGAGAAGTCACGCAAGCAGATCAAGGAGAGGAAGAACAGGACGAAGAAGATCCGTGGAGTCAAGAAGGTATCCATATA
TACTAATCTTGGTTGATTTCCTTACTGATCTGTGTCATATCCACTAAGTCGTTTTCTTGGATAAATTTTGCAGACAAAGG
CCGGGGATGCCAAGAAGAAATAAGGAAATATTATTCTCGAATGTTGGCTGCCTTCAGTTCTATCTGTTCACAATCAGTGT
CTGTACCCTTTAGGAAATCTTGTTGTGGCAATGTCGCAGTATGCTTAATCTAGTAGAAAGAGAATTTTGAGCTTTCACAT
CGAATTTCGTACCTGGTATGCTG---------------------------------------------------------
--------------------------GGTAGTATTACTCACTTGATTTTTTCTGCTAGTGTTCTGCTTTGTCAAGTTGAG
ATGAGTTCA-TTGAGTGTGGTTCTGTTCCAAAATTCTGCTATTTTTGTTTAAGTTGTGGACCTATTTCTGTTTTTGTGAT
TCCATGAGTCTGAGCTTGTGGAAATTTATGTTG-----------------------------------------------
--------------------------------------------------------------------------------
----------------------GAGTGAGTATCTGGCAACTACATG----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATATCCAT
TCTGCACATGATATGTCACTTGGTGTGAACTAACTTGACA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr6D_1_TraesCS6D01G177000
GGGAGGAGCCTGTGCGGCGTCAACATCACGATCGTCCATTTGGGATCAAACGAGAGGCCTCGAAATTTGTTTCTGGAGTA
GCGGCCCACGTGGGAGGAAGAGGTCCATCAGACGGCCAAAAATGATTCAGACGTGTGATCTAACGACCAAAATTGCTGAT
GGCCTGAGAGCCTTCCTAACATGCTTAGTTTTAATAATGTATCTAAATTTGATGTGCTTTATCCTTCCAAAGCTTTATGT
TTGACATATAATATATATTGCTTGTGCAGGATGGTTATAAGTTGAGAAATAATTTTTTTATTACATTTGCTAAAGTACCG
TGCAAATGAAGCTTAAGACAACATACCTGACGTTGTAAGGTAATATCGTAATCACATCAAGTAGATCGTAGTTCGTAACA
TATAGTTATTTGGATCATTATTTTCTATGTATATATCGCCGAGTTACATTGCAGGTGAAATGGCTTTCAATTATTTTTTA
ATTGTTGCAGGCTATCTTTTTTCTACAGTAGTCAACGTGTACGTGCAATGCACGTTAATTTAAAAGTATATTAAGTGCAT
GCGGATATTAAGTAAGATATTATTTGCGTGTTATTATGTGATTAATACTATATTTGGCATAAATTAACTGCATGCTAAAC
GTGTTGAGCGCTCGACATTAAAGCGGTCTAGGTAATTGGATCGACATGATTTGATGGCCAAGATTAATTGGATCCGCCCC
TTTGGATCTTTTTATAGATATACAAAATATAATATACATTATATGCGCAATCAGATAAATGCAAAATTTGATTTGCAATA
GGTGTAATAAAAAAATTTAAAAGCCCGTGGCAACGCACAGGCCTCCTACTTATTACTGTAGTTTATTTTAAAATCAAAGA
TCCTTATCATTCGTAACCACAGAAATCAGGTCGC----------------------------------------------
---------------------TTAAAATTGGCCCACAATTCTTTTCAGCCCAACTATCTTAATGGCCATATAAGCCCTTC
TGCTAGGAACGACCTAGGTTTCCACCTGTATATAAAACCACACCTTCCAC-------------CCTGCCGCCGCCGCCTC
TCACTCGCGCCGCTGCCGTAGCTAG-AATCCCTGCGAAGAGGAAGCACCTCGGGCATCAGCAGCAATCATGGCGGACGCG
AAGACGGCGCCTGCGGTGACTCTCCGCACCCGTAAGTTCATGACGAACCGTCTCCTCTCACGCAAGCAATTCGTGCTCGA
GGTGATCCACCCCGGCCGCGCCAACGTGTCCAAGGTGCGCCCTCCATACTGCCAAGATCGTTGTCATCTTTGGGCTCGTT
GATTTTCGATGCGAGTTTAGGCTGATCCGCGTATGTCGCAGTCGGATCTCAAGGAGCGTCTGGCCAAGATTTATGAGGTG
AAGGACTCGAACTGCATCTTTGTGTTCAAGTTCCGCACCCACTTTGGAGGCGGCAAGTCCACCGGCTTCGGCCTCATCTA
CGATAACCTCGAGGCTGCCAAGAAGTTCGAGCCCAAGTACAGGCTGATCAGAGTATGCCTCTCTTGCTTCATTCATCCCA
CCCTTATCTG--CTCTGAATCCTTGGGTCTCCATATTTATTTTACTGTTATCTCATAATAAGCTTTGATCTTGTCCTATT
GTAGCCTTTGTATAATGCATTTAGTCAATTTTGTGCTCTCATCCTTGAGTCAGTATAATAAGCTCTGATCAGGGTACTTG
TAGTTCCAATATTAGTTGTCTTATCTTGGATAAAAAAACACTTGCCAAGTCTTGCTGCCACTGCATGGTGGCAAATAAAT
CCATTTCTTGGCCGATCTTGTTTTCTGATTTTTGTATAATAGGCACATATCTAGAAATGGACACTCTAATAGCAATATCG
GTTACC-TTGCTTCAATCCACCTTCAACCAATTGGGGCCTTCGGATTTGCCAGAATTTATTTCAAAATGCGGGTGATACT
GTGCCACACTTGATGTTCCTGTTAACTGTAGCAATTTTAGAACTGATGACAGTCGATCTTTGATGTAAGATAATGATAGC
TTTTGCTCAAAGCAAAACGCTTGCAGTTTCTGCATTTGTGTTGTATGTTTCTGTTGTTGTGCTAGAAAGTCTGTCTGACA
CAATTTTGCATGTATCCGAGCATGAGCCATGATCTGTCATGGCTATAATGACGTGCTGCCAGCCTTGTGATGCTACTCTT
TTTGTCGAGCAGCTCATTTATATTAATTTCCATTATTTCCATTATTTTCATTGTTTATGCTTTACTGAGATGAAGCACTT
CAAAATTTTGTCCGCCAACTTCTAAATTTCTGTTCATCAGCATGTGCTCTAAACAATAACATCATTTTTTCTGCGACCAC
ACTTACGAGAATTAAGGATGTCAGGTTCTCATTTTCTTATAATTATTCTTGCTCTTCTGCAGAACGGGCTAGCCACCAAG
GTAGAGAAGTCACGCAAGCAGATCAAGGAGAGGAAGAACAGGACGAAGAAGATCCGTGGAGTCAAGAAGGTATCCATATA
TACTAATCTTGGTTGATTTCCTTACTGATCTGTGTCATATCCACTAAGTCGTTTTCTTGGATAAATTTTGCAGACAAAGG
CCGGGGATGCCAAGAAGAAATAAGGAAATATTATTCTCGAATGTTGGCTGCCTTCAGTTCTATCTGTTCACAATCAGTGT
CTGTACCCTTTAGGAAATCTTGTTGTGGCAATGTCGCAGTATGCTTAATCTAGTAGAAAGAGAATTTTGAGCTTTCACAT
CGAATTTCGTACCTGGTATGCTG---------------------------------------------------------
--------------------------GGTAGTATTACTCACTTGATTTTTTCTGCTAGTGTTCTGCTTTGTCAAGTTGAG
ATGAGTTCA-TTGAGTGTGGTTCTGTTCCAAAATTCTGCTATTTTTGTTTAAGTTGTGGACCTATTTCTGTTTTTGTGAT
TCCATGAGTCTGAGCTTGTGGAAATTTATGTTG-----------------------------------------------
--------------------------------------------------------------------------------
----------------------GAGTGAGTATCTGGCAACTACATG----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATATCCAT
TCTGCACATGATATGTCACTTGGTGTGAACTAACTTGACAATAATTCTTAGATAAATTA-----GAGACAATTCTAAAAA
TAATACAGTCCTGATGAGAATTTCTGTTGCGTTTGGTTGTCTGCATCTACTATTTTGGCTGTGTTGCATACTTGTCGTTT
GGTTGGCCAACACGGCGAGCGTGGAGTCATGGGCACATCCCCCGTCAGCGGCGCGTGGGCACATTCCCCGTCAGCGGCGC
GACCAAGTAGTTGCTAGTGCGCTCTTCTTTTGTGT---------------------------------------------
-----------------------------------------AGGCCTTATCTTAAATTGAAGCACTGTTGTGTAGAGGGA
TTATGAGTTAAATGAACACAACTGGGTGCTACCCATGTGGGCTCTTTTGCATCACTCGAGGTTGCAATGTTGGAAATGGC
CGAATCAGGACGTTCCTAGCAGAGCTGGCTGGGAGGTGCTC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TAAGTTCCTTTCTATGCAGGGCAAACAGTGACGT-ACACAACCA
AATGGCACACTTTCTTCCCGCACGAGCCTAATTGGCTCGTATGCGGGCAACCAATCACGCCATAAGTGTTTTTCATCTCA
TATTATTGATTTCATCCAAGATGCCCAAG---------------------------GACACTCTGTTTAAACACTTCTCA
ATCTGGCTCAAGGAATAC---GGTCGAAACTCATCCGTTTCTTGTGAGCCAACCTTAGCGGGCCAACTCAGAACGACCCT
CTGTTTCTTCTGGCCTAAAAAGATGTGTTCTTATCTTCTTCACATTATCTCAAGTAGTGTTTCTTTTTCTATCGTTAGAC
CGTGTTTTGACTCCTTTTTGTCTTCTGTTTCCTCTCGCTTGTTTTTTTGTCCTTCCATCCTTTTAGGTTTTCTCTTGGTT
TTTGTCGTACCACCACTTTCCCTTTTTGCCGAGGACGCACACAATCATCTCACGACACCCCTCTCTCCGCTCCGCTCCAA
ATCACCACCGCACAAGCCTTTGCTTCTAGACGACGCTGCTTGTCTTCCGCTTCGTTATCTACTAGCATTGCTCCATTCCG
GTCTCCACGACCAATGCCCAACGTCTCCTCATCATTT
>chr6B_861
TTTATTTTGAAAG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CAAAGA
TCCATATCATTTGTAACCACAGAAATCAGGTCGCTTAAAATTGGGCCGTTTATTTCAAAAGCAGAGATCCATATCATTTG
TAACCACAGAAATCAGGTCCCTTAAAATTGGCCCACAATTCTTTTGAGCCCAACTATCTTAGAGCCCATATAAGCCCTTC
TGCTAGGAACGACCTAGGTTTCCACCTGTATATAAAACCGCATCTTCCACGCCACGCGCTAGCCCTGCCGCCGCCGCCAC
TCACTCGCGCCGCTGCCGTAGCTAGTAATCCCTGCGAAGAGGAAGCACCTCGGGCATCAGCAGCAATCATGGCGGACGCT
AAGACGGCGCCTGCGGTGACTCTCCGCACCCGTAAGTTCATGACGAACCGTCTCCTCTCACGCAAGCAATTCGTGCTCGA
GGTGATCCACCCCGGCCGCGCCAACGTGTCCAAGGTGCGCCCTCCATACTGCCAAGATCGTTGTCATCTTTGGGCTCGTT
GATTTTCGATGCGAGTTTAGGCTGATCCGCGTGTGTCACAGGCGGATCTCAAGGAGCGTCTGGCCAAGATTTATGAGGTG
AAGGACTCGAACTGCATCTTTGTGTTCAAGTTCCGCACCCACTTCGGAGGCGGCAAGTCCACCGGCTTCGGCCTCATCTA
CGATAACCTCGAGGCTGCCAAGAAGTTCGAGCCCAAGTACAGGCTGATCAGGGTATGCCCCTCTTGCTTAATTCATCCCA
CCCGAATCTG--CT--GAATCCTTGGGCCTCCATATTAATTATACTGTTATCTCATAATAAGCTTTGATCTTATCCTATT
GTAGCCTTTGTATAATGCGTTTAGTCAATTTTGTGCTCTCATCCTTGAGTCAGTATAATAAGCGATGATCAGGGTACTTG
TAGTTTCAATATTAGTTGTCTTGGATA----AAAAAAACACTTGCCAAGTCTTGCTGCCGCTGCATGGTGGCAAATAAAT
CCATTTCTTGGCCGATCTTGTTTTCTGATTTTTGTATAATAGGCACATATCTAGAAATGGGCACTCTAATAACAATATCG
GTTACCTTTGCTTCAATCCACCTTCAACCAATTGGGGCCTTCGGATTTGCCAGAATTTATTTCAAAATGCGGG-------
-------------------------------------------------CAGTCGATCTTTGAAGTAAGATAATGATAGC
TTTTGCTTAAAGCAAAACGCTTGCAGTTTCTGCATTTGTGTTGTATGTTTCTGTTGTTGTGCTAGAAAGTCCATCTGACA
CAAGTTTGCATGTATCCGAGCATGGGCCATGATCTGTCATGGCTATAATGACGTGCTGCCAGCCTTGTGATGCTACTCTT
TTTGTCGTGCAGCTCATTCATGTTA---------ATTTCCATTATTTTCATTGTTTATGCTTTACTGAGATGAAACACTT
CAAAATTTTGTCCGCCAACTTCTAAATTTCTGTTCATCAGCATGTGCTCTAAACAATAACATCATTTTTTCTGCAAACTC
ACTAACGAGAATTAAGGATGTCAGGTTCTCATTTGCTTATAATTATTCTTGCTCTTCTGCAGAACGGGCTAGCCACCAAG
GTAGAGAAATCACGCAAGCAGATCAAGGAGAGGAAGAACAGAACGAAGAAGATCCGTGGAGTCAAGAAGGTATCCATATA
TACTAATCTTAGTTGATTTCCTTACTGATCTGTGTCATATCAACTAAGTCGTTTTCTTGGATAAATTTTGCAGACAAAGG
CCGGGGATGCCAAGAAGAAATAAGAAAATATTCTT---GAATGTTGGCTGCCTTCAGTTCTATCTGTTCACAATCAGTGT
CTGTACCCTTTAGGAAATCTCATTGTGGCAATGTCGCAGTATGCTTGATCTAGTAGAAAGAGAGTTTTGAGCTTTCACAT
TGAATTCCGTACCTGGTACGCTG---------------------------------------------------------
--------------------------GGTAGTATTACTGACTTGATTTTTGCTGCTAGTGTTCTGCTTTGTCAAGTTGAG
ATTAGTTCA-TTGAGTGCGGTTCTGTTCCAAAATTCTGCTATTTTTGTTTTAGTTGTGGATCTAGTTCTATTTCTGTGAT
TCCATGAGTCTGAGCTTGTGG------------------------TCCTAAATACTACAATGTTGAGTCACTTATTTTGG
GACGGAGGGAGTATTTGTTTTCTAGAGATTTCAAATGGACTACCACGTACGTATGTATATATGCATATTTAGAGTATAGA
TTCACTTATTTTGCTTTGTATGGAGGGAGTATTTGTTTTCTAGAGATTTCAAATGGACTACCACATACCTATGTATATAG
GCATATTTAGAGTATAGATTCACTCATTTTTGCTTTGTATGTAGTCACTCGTTGAAATTTTTAAAAAACAATAAATAAAT
CTATGGCACGATCTGCACATGATATGTCACTTGGTGTGAACTAACTTGAGACAATAAATAAATCTGGGCACGA-------
TCTGCACATGATATGTCACTTGGTGTGAACTAACTTGACGATAATTCTTAGATAAATTAAATTAGAGACAGTTCTAAAAA
TAATACAGTCCTGGTGAGAATTAATG--GTGTTTGGTTGTCTGCATCT--------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr6A_1105
ATCAGGGCGTTACA------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CG
AAGACGGCGCCTGGGGTGACTCTCCGCACCCGTAAGTTCATGACGAACCGTCTCCTCTCATGCAAGCAATTCGTGCTTGA
TGTGATCCACCCCGGCCGCGCCAACGTGTCCAAGGTGCGCCCTCCATACTGCCAAGATCGTTGTCATCTTTGGGCTCGTT
GATTTTCGATGCGAGTTTAGGTTGATCCATGTGTGTCGCAGGCGCATCTCAAGGAGCGTCTGGCCAAGATTTATGAGGTT
AAGGACTCGAACTGCATCTTTGTGTTCAAGTTCCGCACCCACTTCGGAGGCTGCAAGTCCACCGGCTTCGGCCTCATCTA
CGATAACCTCGAGGCTGCCAAGAAGTTCGAGCCCAAGTACAGGCTCATCAGGGTATGCCTCTCTTGCTTCATTCGTCCCA
CCCTTATCTACTCT--GAATCCTTGGGCCTCCATATTTATTATACTGTTATCTCATAATACGCTTTGATCTTGTCCTATT
GTAGCCTTTGTATAATGCATTTAGTCAATTTTGTGCTCTCATCCTTGAGTCAGTATAATAAGCTCTGATCAGGGTACTTG
TAGTTCCAATATTAGTTGTCTTATCTTGGATAAAAAAACACTTGCCAAGTCTTGCTGCCACTGCATGGTGGCAAATAAAT
CCATTTCTTGGCCGATCTTGTTTTCTGATTTTTGTATAATAGGCACATATCTAGAAATGGGCACTCTAATAAAAATACCG
GTTCCCTTTGCTTCAATTCACCTTCAACCAATTGGGGCCTTCGGATTTGCCAGAATTTATTTCAAAATGCGGGTGATACT
GTGCCACACTTGATGTTCCTGTTAACTGTAGCAATTTTATAACTAATGACAGTCGATCTTTGATGTAAGATAATGATAGC
TTTTGCTTAAAGCAAAACCCTTGCAGTTTCTGCATTTGTGTTGTATGTTTCTGTTGTTGTGCTAGAAAGTCCATCTTACA
CAAGTTTGCATGTATCCGAGCATGAGCCATGATCTGTCATGGCTATAATGATGTGCTTCCAGCCTTGTGATGCTACTCTT
TGTGTTGTGCAGCTCATTTATGTTA---------ATTACCATTATTTTCATTGTTTATGCTTTACTGAGATAAAGCACTT
CAAAGTTTTGTCCGCCAACTTCTAAATTCCTATTCATCAGCATGTGCTCTAGATAATAATATCATTTTTTCTGTGAACTC
ACTAACGAGAATTAAGGATGTTAGGTTCTCATTTGCTTATAATTATTCTTCCTCTTCTGCAGAACGGGCTAGCCACCAAG
GTAGAGAACTCACGCAAGCAGATCAAGGAGAGGAAGAACAGGACGAAGAAGATCCGTGGAGTCAAGAAGGTATCCATATA
TACTAATCTTAGTTGATTTCCTTACTGATCTGTGTCATATCAAGTAAGTTGTTTTCTTGGATAAATTTTGCAGACAAAGG
CCGGGGATGCCAAGAAGAAATAAGGAAATATTCT---CGAATGTTGGCTGCCTTCAGTTCTATCTGTTCACAATCAGTGT
CTGCACCCTTTAGGAAATCTCGTTGTGGCAATGTCGCGGTATGCTTGATCTAGTAGAAAAAGAATTTGGAGCCTTCACAT
CGAATTTCATACCTGGTACGCTATGTAGTACTCCCTCCGTTCCAAAATAGATGACCCAACTTTATAATAGTTTAGTATAA
AGTTGGGTCATGTATTTTGAAACGGAGGGAGTATTACTGACTTGATTTTTGCTGCTAGTGTTCTTCTTTGTCAAGTTGAG
ATGAGTTCAATTGAGTGCAGTTCTGTCCGAAAATTCTGATATTATTGTTTAAGATGTGGATCTATTTCTGTTTCTGTGAT
TCCATGAGTCTGAGCTTGTGGAAATTTATGTTGTACTCCCTCCGTTCCTAAATACTCCCTCCGTCAGGAA----------
--------------------------------------------------------------------------------
----------TTACCTGGAATGGAGGGAGTATGTGACAACTACAGCAAGCGCCCAATCTTTCAAA---------------
--------------------------------------------------------------------------------
----------------------------------------------------AATAAATAAATCTGGGCACAATATCCAT
TGTTCACATGATATGTCACCTGATGTGAACTAACCTGACGATAATTCTTAGATAAATTAAA-----GATAATTCTAAAAA
TAATAGAGTCCTGATGAGAATTAATGGTGTGTTTGGTTGTCTGCATCTACTATGTTGGCTGCGTTGCATACTTGTCGTTT
GGTTGCA----------------------------------------------------------CCCCGTCGGCGGCGT
GACCAAGTAGTTGCTACCGTTGTCGCCACTGAGAAAGTCCCTGTGGAGGGATGAATATGAGGTCCTTGAGTGAGAGGATG
AGGAGGGACGAATGTAGTGTGCGTGCCATGGTAGTGAGAGGAGGCCTTATCCCAAATCGGAGCACAGTGCAACCTGACGT
ACACCATATATCAGACTGCACGAGGTTGCTACCCATGTGGGCTCATTTGCATCACTCGAGGTTGCAGCATTGGAAATGGC
TGAATG-GGTCGTTCCTAGCAGAGATGGTTGGGAGGTGCTTTAAGTTCCTAGACCGGTCTAGCTGGCGGCCGGGCGCTCG
CTGCCGCTCGTGAGCGGCTGGCCCCTGGTCCCAGACGTCTAGTCACTGCTACATATTCGAAAGGGCAAAATTACTGTAAT
CCAAAAGTGCTAAAAGATACTACTAATTAATTATCTTTATGTGGTTTTTTCTCGCGTGATGGATACATGTTCCCATGTTT
GTTCCCAGTGCATTAATTTTTGATTTTCAAAATTATAAAAGACATACCTTCTAAACCGTGTGTCGAAATTCAGATCCGTT
TTTCGTTGAAACCCTCGTGGTGTACTATTCAAAAGTAGATCCCGCATGAGGATATTTCGACGAACTAGTCTTCCTACCAA
CTAAACATCAATGTGCGTGTAACTAAACTATATTGTCGCGCCAACTAAGCATATGTGCCTGCCAATAGTCCTGCGAACTA
AACATCAATGTGTCTGTAACTAGACTACATTGCCGTGCCAACTGAGCATATGTGTGTGTCAATAGTCCTGGCAACTAAAC
ATCAATATATGTGCAACTAGACTACATCGCCACGCCAAATGAGTATATGTGTGTGAACTAGTCGTGCCAACTAAATATCA
ATGTGTGTGCAACTAGACTACATTGTCGCGCCAACTGAGCATATGTGTGTGCAACTAGACTATATTACAAGCCAACTAAG
TATATGTGTGTGCAACTAGTCTTTCTGTCAACTAAATATCAATGTGTGTGCAACTAGACTATGTTACAAGCCAACTAAAC
ATCAATGTGTGTGCAACTAGACTACATTACAAACTATGACAATTCATATGCGACTATGCAGACCAGATTGTGCAACTCTA
TGGCCATGCATGCGCCAACTAAGACTACTATGTGTGCAACTACAACTACTGTGGATGGAGCTCCAAAAAACTGGGTTTGA
AAAAAATTGCAACATGCAGTACTAAAGTTGCACAATATAGCGCCAAAGTTGGCATCAAAAAAATTTCGTCAAAGCATACT
CATGCGGGATCTAGTTTCAAAGATCTCGTCGCAAAGAATTCAACAGTGAAGATGGATCTGAATTCGGACGCGTAGTTTGA
AATATATGGCTTTTTAAAAATTTAGAAAACCAAAATAATTGTACGTGAAGCTATTTTTTTAAATCGGACTAACCAGTGTG
AACATATTAAATACTGATAACAACATGAATTAGCAGACACAAAAAACTCATGCATGCTAGAAAGCCCAGCCACTCGTTCT
CTCCAATTAGTGCGCGGCCACTTTTTAAATTTTGAGTAAGTTCCTTTCTATGTAGGGCAAACAGTGTACGGACACAATCA
AATGGCACACATTCTTCCCGTGCGAGCCTAATTGCCCCGTATGTGGGCAACCAAACACGCCATAAGTGTTCTCCATCTCA
TATTATTGATTTAATCCAAGATGCCCAAGTCAAACAATCAAGCTCCACTGACGCAGGACACTCTGTTTAAAGACATCTTA
ACCTGTCTCTGAAGGAATACAGGTCGAAGCTCATCCGTTTCCTGTGAGCCAACCTTAGCGGGCCAACTCAGAACGAC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>SNPs
SSS---SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
---S-------S--------------------------------------------------------------------
---------------------------------------------S---------------SS-S---------------
---------------------------------------S--S-----------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S--------S--------------------------------------
--------------------------------------------S-----------------------------------
---------------------------------------------------S----------------------------
--------------SS-----------S-------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S----------S--------
--------------------------------------------------------------------------------
---------------------------------------S----S-----------------------------------
-------S---------------------------------------------------------------SS-------
---S----------------------------------------------------------------------------
-------S-------------S---SSSSSSSSS----------------------------------------------
----------------------------------------------------------------------------S-S-
---S------------------------------S---------------------------------------------
--------S-----------------------------------------------------------------------
----------S------------------------------S--------------------------------------
--------------------------------S--SS-------------------------------------------
--------------------S-------------------------S---------------------------------
------------------S-------------------------------------------------------------
--------------------------------------S-----------S-----------------------------
-----------------S------------------------------------------S------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------S--S--------SS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
----------------------SS--S--S-----------------------S-------S------------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S------S
----------------SS-SSS--SS-SS-SSSSS---------------------------------------------
---------------------------------------------------SS----S-S-----S--SSSSSSSSSS-S
SS-SS-SS--SSS--SSS--SSS--S------------------S---------------------SSS-----------
S----SS--S--------------S---S-----------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-------------SSSS-------S--
----------S---------SS------------S-S------S----------S---------------S-S-------
------------S----------------------------------------------------------S--S---S-
-S---S---SSSSSSS-S----------S------------S-----------------------------------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_59
---------------------------------------TTGGGATCAAACGAGAGGCC---------------------
--------------------------------------------------------------------------------
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>reverse_1402
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------TCGGATCTCAAGGAGCGTCT-------------------
--------------------------------------------------------------------------------
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>forward_654
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------CTAAAC
GTGTTGAGCGCTCG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_2677
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TCGAATGTTGGCTGCCTTCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>forward_1485
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TCAAGTTCCGCACCCACTTT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_3547
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TTGCGTTTGGTTGTCTGCAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
