>input_sequence_39911
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------------ATGGCCACCGGAGGTATGACCCTGGAGAGCCTACCGAACGAGCTACCATTAGACTTCTTGAGCAAAAT
CACAAATAACTTCTCCGGTGAGCTACTACTTGGTCAGGGCGCGTTCGGGTCAGTTTATAAGGTAGTACTGTATGATTTTG
CCACAACTTTTTCCGTCAATTCAGATGTTGATACGGGAAGGTGCTAAGTTAGATTAGTTTTTTGTGACATTGAACAGGGG
ATCCTGGACGATGG---AGTGGTTGCTGTGAAGAAGCTCGCAGAAAATTCGCCTGTACCACGTGACACAATATTCGCGAA
TGAGGTTCAGAATATTATGGTGCTCGAGCATGAAAATATCGTCAAGTTGGTTGCCTACTGCCGGGAAGCACAAAACAAAT
TGGTGCAGAGCAACGGACGATATATTATTGCAGAGATCACTGACACTGTACTCTGCTATGAATACTTGCCTAAGGGGAGC
CTTCACAAGAATCTTTTTGGTATGTCATAGGAGTATCATTTACTATCCGGGCTAGTAT---------TATTTTTCATGCA
CCTTGTTTGGAGTTCTAGCATGACTTTGCATAAGGTCCTCTTTT-TCCGCACCAGTAATTTACTGAGC-AAA--------
--------------------------------------AAGGATATCATCACACGTTATGAATAGAAGAATCGTGCTGTT
TTTCTGGTGGAGATTTTTCACTTCACAAGATCTTTGCCGTTGTT-ATTATTCTGAGATATTGTTATCGTCTTTATCCACC
ATCTTAGATAAATTATAAAATTCCATGACATGTTACTTCAGGTGAAT---CCAGTAGCATTGATTGGGATATGCGCTTTA
AAATAATAAAGGGAATATGTGAAGGTATACATTTTCTACATACCTTGCCTAGTCCCGTTCTCCATTTGGGTCTGAAGCCT
CAGAATATACTACTGGGTGACAACATGACACCGAAAATTGCGGATTTTGGTTTCTCCAGAATATTCGGCCAAGATCAAAC
CCGAAAGAACACACGAAGTGTCGTGGGATCGATGTAAGTTACTGCATGTCTATTATGATGATATATCAGCTATCTTGTTC
CTATACTGTAATGTGAAACTCATTTTCACATCTCCAATTAATGATGCTGATTAGTATCTTGATGTTAATGCCGTTAGTGG
GTACATGGCCCCGGAGTATCTGTACAATGGCGAAATCTCGGCTCGGTCAGACATATATAGTTTAGGCCTAATCATAATGG
AGATATCCACGAGAGAGATGAATAGTTCTAGCACTGACCAGAAGCATGCAAGGAAATATATTGATGGAGTAAGAATTAAT
AT-ACTTTATCTTTT-GAAGACTAAAA-TTGAGAATATTCTCTCA--GTTGATTTCCTTACATTATGATAGTTTCACA--
--------------TTTTTATGTAGGTAAAAGAAAATTGGA---CACTGGAGAAAATAATGTGTGAGTACATTGAGTTAG
AAGAACATGGTTTCAATCAAGTAGAAGCATGTATCAATATTGGTCTACAGTGTGTAGAGATTGATCAGAAGAAGAGACCT
TCCATAGAGAACATTGTCAATATGCTCAATAA------GCTTCCAGTGAGCGAGGAGGTATGAAATTCCCTTTGGACACG
TTGGCTCCCTGTTGAGAATAGTTAA-TTCTCTAAATTGCGAAGGAATAATCCTTACTAGTTTTCGTAGGCTGAGCATTTA
ATATAAAAATTTACATAATTGAACAGATTAACAGTGGTGCCTAGGTACAACTAGATCGATAGGAAATGGCCCACTTGCAT
TCATGTTTGTATTT------------------------------------------------------------------
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------------------------------------------------------------------------------AA
CATTTCAAGAATGATTCATGTTTTAAGATATTATACATTCACCTTTTTTTTTACTTAAATTCATCAGATAGTTTAGTAAA
GTTGTTACTTCTCATTT-----TTTGACACTTAAGTAAATCTGCTACTTCTCATTTTTCATATTTCACACTTTCTTATCT
ACACTATATTAACGTAGAATTTTTATATTTCGACCGATGCTAACACGTGTCATCAAATTTCAGGTCTCCCTGTCCACGTG
A-------------------------------------------------------------------------------
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>chr2B_1_TraesCS2B01G222900
CAGAGCGTGACCTGTCAAATTATTCTGTTGATAACACTATTTGTTTCCCCAGTTCTATACCAGAAATAAGCGTGTGTGTT
CAACTTGTAGATGTTTGTGTGGCTGTGTTGGTAATCGAGGTAGGATGTATTTATTTTTCTTGTACATG--TGTGTTCTGA
ACATGGGAAGTTGTTGCCAAAAATGCTGGTTGTTCGTGAAG----AATTCCAACAGAATACTCGTTGGTCCAAACAGCGT
GTACTTCTAATCTGACAGTTTCTTA-AGTCACGTACTGACCGAAGTTCTATCAT-GCTCCCTTTTGGGTATAGCTTCTCT
GCTCTTGCAGAAACCGAATATGGGATGAC-TTTGAAGCAATCTACACAACTATATAAGATAAAGAACTGCATGCTCGTGA
TTACACATGAATATGAC--GTGTTGACTTGGATCTTTTTTGGCTTCCTGTCTCAGAAAATATATCGTTTTTTCAGCGTGA
TGCACTTGATATGAACATAT--CGAGTTGAGTAACGAAATGCTTACGAGCCAAAACACATTATGTTTGATGAATAGATCG
TAAGTCTTTTT----------TAAAATGCATGTGACCGAAATTATCTGCTGACAAGGAAGCTGAACCAAAAGCAAAATCA
G---ACCAAACCGCGTCTACTGATGAGGGCGGACCCAA-----------------GCTAGCGACAGTCAAGTCAACCGAT
CATAG-AAATATCTCC---TTTCTTCTTTCCTTTTGCTTTGCACACATACTAGTGGGCAGTGGCACCGGCAGCAAGTAGT
CTATTCATCTCAGATCTGAAGTTCACTCCCTCTCCCGGTGTTCTCTTCCC--AGCGTGGATCCTAAATCGCGGACGCCGG
ACGAGGAGCGTTCCTCTCCAAGGTCAGTGCACTTGACGAACTGCTTAATTATTCCCAGATACAGCTTCCTTGTGCATCCT
TAGTC--TGATATTGTTTAGCAACTTCCTTGCTTTTAT-AATTGCAAGTTGTAATCGATCGCATCGGCAGCTTCTTACAT
CATCAGCAATTAATGGCCACCGGAGGTATGACCCTGGAGAGCCTACCGAACGAGCTACCATTAGACTTCTTGAGCAAAAT
CACAAATAACTTCTCCGGTGAGCTACTACTTGGTCAGGGCGCGTTCGGGTCAGTTTATAAGGTAGTACTGTATGATTTTG
CCACAACTTTTTCCGTCAATTCAGATGTTGATACGGGAAGGTGCTAAGTTAGATTAGTTTTTTGTGACATTGAACAGGGG
ATCCTGGACGATGG---AGTGGTTGCTGTGAAGAAGCTCGCAGAAAATTCGCCTGTACCACGTGACACAATATTCGCGAA
TGAGGTTCAGAATATTATGGTGCTCGAGCATGAAAATATCGTCAAGTTGGTTGCCTACTGCCGGGAAGCACAAAACAAAT
TGGTGCAGAGCAACGGACGATATATTATTGCAGAGATCACTGACACTGTACTCTGCTATGAATACTTGCCTAAGGGGAGC
CTTCACAAGAATCTTTTTGGTATGTCATAGGAGTATCATTTACTATCCGGGCTAGTAT---------TATTTTTCATGCA
CCTTGTTTGGAGTTCTAGCATGACTTTGCATAAGGTCCTCTTTT-TCCGCACCAGTAATTTACTGAGC-AAA--------
--------------------------------------AAGGATATCATCACACGTTATGAATAGAAGAATCGTGCTGTT
TTTCTGGTGGAGATTTTTCACTTCACAAGATCTTTGCCGTTGTT-ATTATTCTGAGATATTGTTATCGTCTTTATCCACC
ATCTTAGATAAATTATAAAATTCCATGACATGTTACTTCAGGTGAAT---CCAGTAGCATTGATTGGGATATGCGCTTTA
AAATAATAAAGGGAATATGTGAAGGTATACATTTTCTACATACCTTGCCTAGTCCCGTTCTCCATTTGGGTCTGAAGCCT
CAGAATATACTACTGGGTGACAACATGACACCGAAAATTGCGGATTTTGGTTTCTCCAGAATATTCGGCCAAGATCAAAC
CCGAAAGAACACACGAAGTGTCGTGGGATCGATGTAAGTTACTGCATGTCTATTATGATGATATATCAGCTATCTTGTTC
CTATACTGTAATGTGAAACTCATTTTCACATCTCCAATTAATGATGCTGATTAGTATCTTGATGTTAATGCCGTTAGTGG
GTACATGGCCCCGGAGTATCTGTACAATGGCGAAATCTCGGCTCGGTCAGACATATATAGTTTAGGCCTAATCATAATGG
AGATATCCACGAGAGAGATGAATAGTTCTAGCACTGACCAGAAGCATGCAAGGAAATATATTGATGGAGTAAGAATTAAT
AT-ACTTTATCTTTT-GAAGACTAAAA-TTGAGAATATTCTCTCA--GTTGATTTCCTTACATTATGATAGTTTCACA--
--------------TTTTTATGTAGGTAAAAGAAAATTGGA---CACTGGAGAAAATAATGTGTGAGTACATTGAGTTAG
AAGAACATGGTTTCAATCAAGTAGAAGCATGTATCAATATTGGTCTACAGTGTGTAGAGATTGATCAGAAGAAGAGACCT
TCCATAGAGAACATTGTCAATATGCTCAATAA------GCTTCCAGTGAGCGAGGAGGTATGAAATTCCCTTTGGACACG
TTGGCTCCCTGTTGAGAATAGTTAA-TTCTCTAAATTGCGAAGGAATAATCCTTACTAGTTTTCGTAGGCTGAGCATTTA
ATATAAAAATTTACATAATTGAACAGATTAACAGTGGTGCCTAGGTACAACTAGATCGATAGGAAATGGCCCACTTGCAT
TCATGTTTGTATTT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
CATTTCAAGAATGATTCATGTTTTAAGATATTATACATTCACCTTTTTTTTTACTTAAATTCATCAGATAGTTTAGTAAA
GTTGTTACTTCTCATTT-----TTTGACACTTAAGTAAATCTGCTACTTCTCATTTTTCATATTTCACACTTTCTTATCT
ACACTATATTAACGTAGAATTTTTATATTTCGACCGATGCTAACACGTGTCATCAAATTTCAGGTCTCCCTGTCCACGTG
AGCACAAAACATCCCACTTTTCAGTGAGAGATGC----------CGAACATCAAGTAAAACAAGATCAGTGCTACAAAAG
TGGATGATGAAACCAATGTTTGCATTCAATAAA-GCAAGCCATGATGGCC-TTTTTGT--AAAAAAGTATTAATGAGAAG
TGTATTGT--GAACATGACCCATTGATATCACACAATTGCAAATATATTTAGTTTTACTTCCTCTGGAGATTTCTGTACC
AAACATCCTTTTTTGTTGTCAAGAGAGAACAATTTTGCGCAGTTATGCCTTTTCATGTCAGTTCTAAATATTTTTTTGTT
TTCCCTAAAATTCTTAGTAAGATGTCTACACTATCTATACGTTTCCATCTCCTCTCATTCCGCCATTGTTTTTGCCCCCC
CCCCCGCCCCCTCCCCCGGCGCGCGCAAGAGATGGGGATGACATAGAAGCAGTAGGTTTAGTTGACCCTAATGGTATATC
AAACACTTCATTGCATAATCTTTACTAT----------------------------------------------TGATTT
TCTCTTCTACCTTCATCCTTACTCCCACGCCGCCCTCCTCCTCTCCTCCCATGCCGCTCACGTCATGGGTTTTGGTACAC
CTATATCTGATATTAAATCC---------ATGTATGCAACACAAGTTACCATGCAATGTTGTGTACAT--AAAAAATGCT
ATGCAAATGCTACATAGGTGGAAATTGTCATGCCATCCGCAGACAAAATGCCGCACATTATACATAAAAGGCACTAAAAA
GTTGTCAGGCAAGTTTCAATGAAGTTGATAGGCACATATACAATGCGATTTTCTTTCTCAAACACGCAGGAGATATGTGT
ATCATCAAATTAAGAAGAAAATGGAACAAGAATCCATACACCATCCACTCACACATGTTACGCACACCACGCTATTGTTC
TCAGATTGCATCTGTGCATGTTTATCATTAAAAAGATTGTTAGAAAGGACTACGACCAAACAACTAAGCTCCAAGGGCCG
GGGCAGTCAAGAAAGAGAGGCCCCATGCGCCCGC
>chr2A_3
--GAGCGTGACCTGTCAAATTATTCTGTTGATAACTCTATTTCTTTCCCCAGTTCTATACCAGAAATAAGCGTGTGTGTT
CAACTTGTAGATGTTTGTGTGGCTGTGTTGGTAATCGACGTAGGTTGTATTTATTTTTCTTGTACATGAGTGTGTTCTAA
ACATGGGAAGTCGTTGCCAAAAATGCTG---GTTCGTGAAG----AATTCCAACAGAATACTCGTTGGTGAAGAGAGCGT
GTCCTTCTAGTCTGACTTTTCTTTTTGGTCACGTACTGACCGCAGTTCTATCACCGCTCCCTTTTGGGCATAGCTTCTCT
GCTCTTGCAGAAACCGAATGTTGGATTGCTTTTGAAGCAATTTATACAACTACATAAGATGAAGAACTGCATGCTCGTGA
CTACACATGAATATGAC--GTGGACTT---GATCTTGTTTGGCTTCCTGTCTCAGAAAATATATCGTTTTGTGAGCGGGA
TGCA---------AACATAT--TGAGTTAACG-----AATGCTTACGAGCCAAAATGCATGATGTTTGATGAACAGATTG
AAAGTTTTTTCAAAAATAAAATAAAATGCATGTGACCGAAATTACCTGTTGACAAGGAAACTGAACCAGAAGTAAAATCA
G---ACCAAACCGCGTCTACTGACGAGGGCGGACCCAGGTGAAAGAACATGTTAGGCTAGCGACAGTCAAGTCAACCGAT
CATAGGAAATATCTCTCCTTTGCTTCTTTGCTTTTGCTTTACACA--TAGTAGTGGGCAGTGGCACCGGGAGCAAGCAGT
CTATTCATCCCAGATCTGAAGTTCATTCCCTCTCCCGGTGTTCTCTTCCCACAGCTTGGATCCATCATCGA-------GG
ACGAGAAGCGTTCCCCTCCAAGGTCAGTGCACTTGACGAACTGCTCAATTATTTCCAGATACAGCTTCCTTGTGCGTACT
TAATTAGTGATGTTGTTCAGCAACTTCCTTGCTTTCGTAAATTGCACGCTGTAATTGATCGCATCGGCAGCTTCTTATAT
CATCAGCAATTAATGGCCACCGGAGGTATGACCCTGAAGAGCCTACCGAACGAGCTACCATTAGACTTCTTGAACAAAAT
CACAAAGAACTTCTCCGATGAGCTACTGCTCGGTCAGGGCGCGTTCGGGTCAGTTTATAAGGTAGTACCGTATGATTTTG
CCACAATTTTTTCTGTCAATTCAGATGTTGATACGGGAAGGTGCTAAGTTAGATTAGTTTTTTGTGACATTGAACAGGGG
ATCCTGGACGATGGTGGAGTGGTTGCTGTGAAGAAGCTCGCGGAAAATTCGCCTGTACCACGTGACACAATATTCGCGAA
TGAGGTTCAGAATATTATGGTGCTCGAGCATGAAAATATCGTCAAGTTGGTTGCCTACTGCCGGGAAGCACAAAACAAAT
TGGTGCAGAGCAACGGACGATATATTATCGCAGAGATCACTGACACTGTACTCTGCTATGAATACTTGCCTAAGGGGAGC
CTTCACAAGAATCTTTTTGGTATGTCATATATCATTTGC----------------TAT---------TATTTTTCATGCA
CCTTGTTTGGAGTTCTAGCATGACTTTGCATAAGGTCCTCTATTCTTCACACCGGTAATATTGCTAGCAAGCAAGATTCT
TCTACTGATAACGTGTGATGTTATCCTTTGGAGTAGACAAGGATAACATCACACATTATCAATAGAAGAATTTTGCTGTT
GTTTTGGTGGAGATTTTTCACTTCAGAAGATCTTTGCTGTCGTTTTTTATTCTGAGTTATTATTATCATTTTTATCCACC
ATCGTAGATAAACTATAAAATTCCATGACATGTTACTTCAGGTGAAT---CCAGTAGCATTGATTGGGATATGCGCTTTA
AAATAATAAAGGGGATATGTGAGGGTATACATTTTCTACATACCTTGCCTAGTCCCGTTCTCCATTTGGGTCTGAAGCCT
CAAAATATACTATTGGGTGACAACATGACACCGAAAATTGCGGATTTTGGTTTCTCCAGAATATTCGGCCAAGATCAAAC
CCGAAAGAACACACGAAGTGTCGTGGGATCGATGTAAGTTAGTGCATGTTTATTATAGTGATATATCAGCTATCTTGTTC
CTATACTGTATTGCAAAACTCATTTTCACATCTCCAATTAATAATGCTGATTAATACCTTGATGCTAATGCTGTTAGTGG
GTACATGGCCCCGGAGTATCTGTACAATGGCGAAATCTCGGCTCGGTCAAACATATATAGTTTAGGCCTAATCATAATGG
AGATATCCACGAGAGAGATGAATAGTTCTAGCACTGACCAGAAGCATGCAAGGAAATATATTGATGGAGTAAGAATTAAT
AT-ACTTTATCATTT-GAAGACTAAAAATTGAGAATATTCTCTTA--GTTGATTTCCTTGCATTATGATGGTTTCACA--
--------------TTTTTATGTAGGTAAAAGAAAATTGGA---CACTGGAGAAAATAATGTCTGAGTACATTGAGTTAG
AAGAACATGGTTTCGATCAAGTAGAAGCATGTATCAATATTGGTCTACAGTGTGTAGAGATTGATCAGAAGAAGAGACCT
TCCATAGAGAACATTGTCAATATGCTCAATAA------GCTTCCAGTGAGCGAGGAGGTATGAAATTCCCTTTGGACACA
TTGTCTCCCTGTTGAGAATAGTTAATTTCTCTAAATTGCGAAGGAATAATCCTTAATAGTTTTTGTAGGCTGAGCATTTA
AGATAAAAACTTACATAATTGAATAGATTAACAGTGGTGCCTAGGTACAACTAGATCGATAGGAAATGCCCCACTTGCAT
TCATGTTTGTATTTTTTTTTAACACCACCTCATATATTAATTAACCAAAAGACGTGTTACAATCGTTCATTACAGAATTC
ACCACATAAGGCGGTACATCATTAACAAGAATCCCATCCGCTCTATTATCAAAACTAAACTTAGCTATTAGATGGGCCAT
CTTATTAGCGGAACGCCTAATCTTTGAAACTCTGAAGCTATCCATTAGCTTAGAGATACCCCATGCTTCCTTCTTTAGAT
CGTGCAGAGCTGATCTATCATCAAATTCATTTGCAAAAATCGCAGCAACAAAAGTCAGTCTCTAAAATTATAGGAGAATG
TAGTGTTATATCTATATAGAGACCAGCAATGCAAGCTCAGAGTTCCGCTTCCTCCATGCTATTACACCTCCCAATGTAGT
CCCATGAAGAGATCATAACTTTGCCAGCATAACCCCTAGCCACCACACCCACACTTGCCGCACTAATACTTTTCACAAAG
CTAGCGTCGACATTAATTCTGATATAACCTGAAGGTGGGGGCTTCCAACCCATCCGAGCTTCTGAAATATTTGTATTTAA
TATTTCAAGAATGATTCACATTTTAAGATATTATACATTCACCTTTTA--TTATTTAAATTCATCAGATAGTATAGTAAA
GTTGTTACTTCTCATTTTCATATTTGACATTTTAGTAAATCTGGTACTTCTCATTTT-CATATTTCACACTTTCTTATGT
ACACTATATTAACGTAGAATCTTTATATTTCGACCGATGCTAACATGTGTCATCAAATTTCAGGTCACCCATTCCATGTG
AGCACAAAACTTCCCACTTTACTGTGAGAGATGTCGAGAAATGTCGAACGTCAAGTAAAACAAGATCAATGCTACAAAAG
TGGATGATGAAACCAATATTTGCATTCAATAAA-GCAAGCCATGGCGCCCTTTTCTAA--AAAAAGGTATTAATGAAAAG
TGTGTTGTGGGAACATGACCCATTGATATCACACAATTGCAAATATATTTAGTTTTACTTCCTTTGGAGATTTCTGTACC
AAA-----------------------------------------------------------------------------
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----------------------------------
>chr2D_4
---AGCGTGACCTGTCAAATTATTCTGTTGATAACTCTATTTGTTTCCCCAGTTCTATACCAGAAATAAGCGTGCGTGTT
CAACTTGTAGATGTTTGTGTGGCTGTGTTGGTAATCGAGGTAGGATGTATTTATTTTTCTTGTACATGAGTGTGTTCTAA
ACATGGGAAGTTGTTGCCAAAAATGCTG---GTTGTTCGTGAAGAAATTCCTACAGAATACTCGTTGGTCAAAACAGCGT
GTACTTCTAATCTGACAGTTTTTCTTAGTCACGTACTGCCCGAAGTTCTATCGT-GCTCCCTTTTGGGTATAGCTTCTCT
GCTCTTGCAGAAACCGAATATGGGATGGCTTTTGAAGCAATTTATACAACT----AAGATGAAGAACTGCATGCTCGTGA
CTACACATGAATATGGCGTGTGGACTT---GGTCTTGTTTGGCTTCCTGTCTCAGAAAATATATCGATTAGTCAGCGTGA
TGCACTTGATATGAACATATATCGAGTTGAGGGACGAAATGCTTACGAGCCAAAATGCATGATGTTTGATGAATAGATTG
AAAGTTTTCTAAAA---AAAATAAAATGCATGTGACCGAAATTATCTGCTGACAAAGAAGCTGAACCAAAAGTAAAATCA
GACCACCAAACCGCGTCTACTGACGAGGGCGGACCCAGGTG--------------GCTAGCGACAGTCAAGTCAACCGAT
CATAG-AAATATCTCTCCTTTGCTTCTTTGCTTTTGCTTTACACA--TAGTAGTGGGCAGTGGCATCAGGAGCAAGCAGT
CTATTCATCTCAGATCTGAAGTTCATCCCCTCTCCCTGTGCTCTCTTCCC--AGCTTGGATCCCTCAT------------
-CGAGGAGCGTTCCTCTCCAAGGTCAGTGCACTTGAAGAACTGCTCAATTGTTTCGAGATACAACTTCCTTG--CGTACT
TAATCAGTGATGTTGGTCAGCAACTTCCTTGCTTTCCTAAATTGCACGCTGCAATCGATCGCATCGGCAGCTTCTTACAT
CATCAGCAATTAATGGCCACCGGAGGTATGACCCTGGAGAGCCTACCGAACGAGCTACCATTAGACTTCTTGAACAAAAT
CACAAAGAACTTCTCCGATGAGCTACTACTTGGTCAGGGCGCGTTCGGGTCAGTTTATAAGGTAGTACTGTATGATTTTG
CCACAACTTTCTCTGTCAATTCAGATGTTGATACGGGAAGGTGCTAAGTTAGATTAGTTTTATGTGACATTGAACAGGGG
ATCCTGGACGATGG---AGTGGTTGCCGTGAAGAAACTCGCGGAAAATTCGCCTGTACCACGTGACACAATATTCGCGAA
TGAGGTTCAGAATATTATGGTGCTCGAGCATGAGAATATCGTCAAGTTAGTTGCGTACTGCCGAGAAGCACAAAACAAAT
TGGTGCAGAGCAACGGACGATATATTACTGCAGAGATCACTGACACTGTACTCTGCTATGAATACTTGCCTAAGGGGAGC
CTTCACAAGAATCTTTTTGGTATGTCATATATCATTTGC----------------TATCCGAGCTACTATTTTTCATGCA
CCTTGTTTGGAGTTCTAGCATGACTTTGCATAAGGTCCTCTTTT-TCCGCACCAGTAATATACTGAGCAAAA--------
--------------------------------------AAGGATATCATCACATGTTATGGATAGAAGAATCATCCTGTT
TTTTTGGTGGAGATTTTTCACTTCACAAGATCTTTGCTGTTG-TTATTATTCTGAGATATTATTATCATTTTTATCCACC
ATCTTAGATAAATTATAAAATTCCATGACATGTTACTTCAGGTGAAT---CCAGTAGCATTGATTGGGATATGCGCTTTA
AAATAATAAAGGGAGTATGTGAAGGTCTACATTTTCTACATACCTTGCCTAGTCCCGTTCTCCATTTGGGTCTGAAGCCT
CAAAATATACTACTGGGTGACAACATGACACCGAAAATTGCGGATTTTGGTTTCTCCAGAATATTCGGCCAAGATCAAAC
CCGAAAGAACACACGAAGTGTCGTGGGATCGGTGTAAGTTACTGCATGTTTATTATGATGATATATCAGCTATCTTGTTC
CTATACTGTAATGCAAAACTCATTGTCACATCTCCAATTAATAATGCTGATTAATATCTTGATGTCAATGCTGTTAGTGG
GTACATGGCCCCAGAGTTTCTGTACAATGGCGAAATCTCGGCTCGGTCAGACATATATAGTTTAGGCCTAATCATAATGG
AGATATCCACGAGAGAGATGAATAGTTCTAGCACTGACCAGAAGCATGCAAGGAAATATATTGATGGAGTAAGAATTAAT
AT-ACTTTATCATTT-GAAGACTAAA-ATTGAGAATATTCTCTTA--GTTGATTTCCTTACATTATGATAGTTTCACA--
--------------TTTTTATGTAGGTAAAAGAAAATTGGA---CACTGGAGAAAATAATGTCTGAGTACACTGAGTTAG
AAGAACATGGTTTCGATCAAGTAGAAGCATGTATCAATATTGGTCTACAGTGTGTAGAGATTGATCAGAAGAAGAGACCT
TCCATAGAGAACATTGTCAATATGCTCAATAA------GCTTCCAGTGAGCGAGGAGGTATGAAATTCCCTTTGGACACA
TTGGCTCCCTGTTGAGAATAGTTAATTTCTCTAAATTGCGTAGGAATAATCCTTAGTAGTTTTCGTAGGCTGAGCATTTA
AGATAAAAATTTACATAA-TGAATAGATTAATAGTGGTGCCTAGGTACAACTAGATCGATAGGAAATGCCCCACTTGCAT
TCATGTTTGTATTT------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
TATTTCAAGAATGAATCACGTTTTAAGATATTATACATTCACCTTTTA--TTATTTAAATTCC-CAGATAGTTTAGTAAA
ATTGTTACTTCTCATTTTCATATTTGACATTTTAGTAAATCTGCTACTTCTCATTTTTCATATTTCACACTTTCTTATGT
ACACTATATTAACGTAGAATCTTTATATTCCGACCGATGCTAACATGTGTCACCAAATTTCAGGTTTCCCATTCCATGTG
AGCACAAAACTTCCCACTTTTCAGTGG----------GAGATGTCAAACATCAAGTAAAACAAGATCAATGGTACAAAAG
TGGATGATGAAACCAATATTTGCATTCAATAAAGGCAAGCCATGATGGCC-TTTTGTAAAAAAAAAGTATTAACGAAAAG
TGTATTGTGGGAACATGACCCATTGATATCACACAATTGCAAATATATTTAGTTTTACTTCCTCTGGAGATCCC------
------------------------------------GCGCAGTTATGCCTTTTCATGTCAGTTC----------------
--------------------------------------------------------------------------------
--------------------------------------------------AGTAGGGTTAGTTGACCCTAATGGAATATC
AAACACTTCATTGTATAATCTTTACTATTGTTTGATTATTAAACAATGACACAAGGAACTAAAGTTGACCCTAATGATTT
TCTCTTCTACCTTCATCCCTACTCCCACGCCGCCCTCCTCCTCTCCTCCCGTGCCGCTCACGTCATGGGTTTTGGTACAC
CTATATCTGATATTAAATCCATTAAATCAATGTATGCAACACAAGTTACCATGCAATGCTGTGTACATTAAAAAAATGCT
ATGCAAATGCTACATAGATGGAAATTGTCATG-----CGCAGACAAAATGCCACACATGATACATAAAAGGCACTAAAAA
GTTGGCCGACAAGTTTGAATGAAGTTGATAGGCACA--------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>chr2B_1192
CTAATA--------------------------------------------------------------------------
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-------------------------------------------------TATATTAATTTCTTGTTACGTAAAATAGGGG
TTTCTGGATAATGGCGAGGTGATTGCTGTGAAGAAACTCGGGGAAGAATCACCTGTGCCACGTGACAAAGTATTTGCAAA
TGAGGTTAAGAATATTATGGTGCTCGAACATGAAAATATTGTCAAGTTGATAGCATACTGCTATGACACAAACAACAGAT
TGGTGCTGAGCAATGGAAGACACATTATTGCAGAGATTACTGAAACTTTACTCTGCTATGAATACTTAGCTAAGGGCGGC
CTCGACAAGAATCTTTTCGGTATGTCATA---GAATATTTCACTATTCAAGCTATTTA---------TGTTTATTTCTGC
ACTTCTTACTTTTTAAATGGTTTGGAAACT-----TCATCTATTCTTCAGACCATTATAAAAATGGGCAAGA--------
--------------------------------------AAAGAAAACACC-CACACTATCAATAAGAAAATTGTGCTA-T
TGATTGGTGGAAGTTGTTCACTTAAATGTCCTTATT-TGTGG-TTATTATTCTAAGAAATACTTATCATTTGAATCCATT
ATTTTAAAATAATTATAAAATTCTGTGATACTATAGGTGAACCC-----------AGTATTGACTGGGATACACGGTTCA
AAATAATAAAGGGGATTTGTGAAGGTGTACATTTTATACATACCTTACCTAGTCCCATTCTCCATTTGGGTCTGAAGACT
CAAAATATATTGCTGGATGACAACTTGACACCAAAACTTTCGGATTTTGGATTCGCCAGAATATTTGGGGAAGAATACAC
CCGAATAAACACAAGAAGTGTTGTGGGACATGTGTAAGCTACTTTC---TAACTATTCAGATCTATCAGCTACCTTGTTC
CTATAATAAATTGTAAATTTTATTTTCACATCTCCA----ATAATCCTCAATTTAATCTTGATGTTAATGCCTTCAGTGG
ATACATGGCCCCAGAGTATCTATATAATGGTGAAATCTCGGCCCGTTCGGACATATATAGTTTAGGCCTAATTATATTGG
AGATCTGCACGAAAGAGAAGAATAGTTCCAGCACTGACCAGAAGCATGCAAGGAAATATATTGACGGGGTAAGAATATAT
ATCACATCATTACTGGAAAAATTGAA-ATTGAGATTATTCTAGTACAGTTAATTTGTTTACACACACACATGCATGGGAG
GATAATTTAATTTTTTTTTATGCAGGTAAAAAAACATTGGTTCCAAATAGAACAAATAATGGCCGAGTATTCCGATTTAG
AAGAACATTGTTTTGACCAAATAGAAGGCTGCATACATATTGGACTAGAATGTGTGGAGCTTGATCAGAAGAAGAGACCT
TCCATAGAGCACATTGTGAACAAGCTCAATAA------TCTCCCA-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>chr2B_1721
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------ATCCATT
ATCTTAGAAGAATACTAAAATTACACTGTATGTTACTTCAGGTACATCAGCCAGTAGCATTGATTGGAACGAACGCTTCA
AAATAATAAAGGGGATCTGCGAAGCTATACATTTTCTGCATACCTTGTCTAGTCCCGTTCTCCATTTGGGTTTGAAGCCT
CAAAATATTTTGCTGGATGGCAACATGACACCGAAAATTGCTGATTTCGGGTTCTCCAGAATATTTGGCCAAGAACAAAC
CCGAATGAATACACGAAGTGTTGTGGGATCGGTGTAAGCTTCTCTC---TCATTATACTGATATGTCAGCTACCTTGTTC
ATAGAATATAATCTAAACTTA------ACATCTCCATAAAG------TTAATTAAATCTTTATCTTAATGACATAAGTGG
ATACATGGCCCCGGAGTATCTATATAATGGTGAAATCTCGGCCCGCTCAGACATATATAGTTTAGGACTAATCATCATGG
AGATCTCCACGAAAGAGAAGAATAGTCCTAGCACTGACCAGAAGCATGCAAGGAATTATGTTGATGGAGTAAGTATAAAC
ATCACTTTGTTATTT-AAAGATTCAA-ATTCATAATATACTGTTATACATAAATTAAAA---------------------
---------------TTTTATTTAGGTAAAAAAAATTTGGA---CACCGGAGAAAATAATGTCCGAATACCCCGATATAG
AAGACCATTGTACCGATCAAGTAGAAGAATGCATCAACATTGGTCTACAATGTGTGGAGATTGATCAGCACAAGAGGCCT
ACCATACAGAAGATTGTCAACATGATCAATAA------GCTACCAATGA-------------------------------
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>chr2D_1739
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-----------ATTAAAAGAATCTATGGTATGTTAC-TCAGGTGAAT---TTAGTAGCATTGAATGGGACATACGCTTCA
AGATAATAAAGGGGATTTGTCAAGGTATACATTTTCTGCATACCTTACCTAGTCCTGTACTCCACTTGGGTCTCAAGCCT
CAAAATATATTACAGGATGGCAACATGACACCGAAGATTGCCGACTTTGGATTCTCCAGAATATTTGGCCAAGAACAAAC
CCGAATGAACACACGAAGTGTTGTGGGATCTGTGTAAGCTTCGCTC---TCATTATAATAATATATCAAATATTTGAGGT
ACTA--------------TTTATTTTTACATCTGCA----GTAATGCTGATTAATTTATT--TGTTATTGCCATTAGTGG
ATACATGGCCCCAGAGTATCTATATAACGGTGAAATCTCGGCCCGCTCCGACATATATAGTTTAGGCCTGGTCATATTAG
AGATCTCCACAAGAGAGAAGAATAGTTCCAGCACTAACCAGAAGCATGCAAGGAAATATATTGATGAAGTAAGAATAAAC
ACCACTTCATTATTT-AAAGATTAAA-ATTGATAATACTCTCCTATAATCACTATATATTACATTGCCAC------GGAG
GATAATTTGGAAAAA---TATCCAGGTAACAGAAAAATGGA---AACTAGAGACAATAATGTCCGAGTA---CGAGTTAG
AAGAAGATGAACTCAATCAAGTAGAAGCCTGCATCGATAGTGCTCTGAAATGTGTGGAGATTGATCAGAAGAACAGACCT
ACCATTCAGGACATTGTGAAAAAGCTCAGTAACCTTTAGCTACGAATGAACGAGGAGGTATGTAATTTCCTTTAGACACG
--------------------------------------------------------------------------------
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----------------------------------
>SNPs
-S---------------------------------S--------------------------------------------
------------------------------------------------------------------------------S-
----------------------------SSS---------------------------------------S---------
---------------------S--S-------------------------------------------------------
---------------------------S-------------S--S-------S-------S-------------------
S---------------------SSSSSSSS------S---------------------------------S---------
-------------------------------SS----------------------SS---S-----------------S-
S----S----S-------------------------------------------------------------S-------
-----------------------S-------------S------------------------------------------
---------------S-----S-------S----------S----SS--S-------------------S------S---
-------------------------S-----------------------------S-------SSS----SSSSSSSS--
---------------------------------------------S-------S---------------------S-S--
--S--------S-----S-----------------SS---------S-S-------------------------------
-------------------------------------------------------------------------S------
------S----------S--------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------SSS-S--SS--S-----S-SS----S-------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
---S---------------------------------S-----------------------S-----S-S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------S---------------------------S----------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-------------------------------S------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-S---------------------S--------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----------------S----------------------------SSS---S--------------------------
-----------------------------S--S---------------------------------------------S-
--------------------S------------------------S------------------------SS----S---
----------S----------------------S----------------------------------S-----------
-----------------S--------------------------------------SS------------------S---
--------------------------------------------------------------------------------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----------------S-----
-------------S------------------------------------------------------------------
------------------S-------------------------------S-----------------------------
----------------------------------------------------------S---------------------
-----------------S--------------SSSSS---------------S-----S---------------------
----S-S-S-------S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_874
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------CGTGGATCCTAAATCGCGGA------
--------------------------------------------------------------------------------
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----------------------------------
>reverse_2869
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------GCCCACTTGCAT
TCATGTTTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_876
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGGATCCTAAATCGCGGACG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_3621
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTTTATATTTCGACCGATGCTAACACG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_1322
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTGCTGTGAAGAAGCTCGCA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_4045
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CCATCTCCTCTCATTCCGCC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
