>input_sequence_39874
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---------------------------------------------ATGGCCGCTGCCACGGTGCGGTCGACGTTGCCCCG
CTGCCTCCTCCTCCTCCTCCTCCTCCTCCTGTCCACGGCGCTTGCCTCCGCCGCCACCGCGCCGCGGCTCGTGCTCCTGG
CGCCGTCCGGCTCGCACACGCCGTGCCTGGACAACCCGCCCGACCTGACGGCCGCGGCCGACGAGGCGGGCGAGCTCGTC
CGCGACCTCGGCAGCCTCCCGGCCTACGTCACCGGATCCCGCAGCTCCACGCGC-----GCCATCGTCCTCGCCTCCGAC
TACTTCGGTCAGTGCTCAGAGTCACCGAGGCCAC----TTAGCAAGCCGAAGGAACGTCTCTGTTCCTAC----------
--TCCAGTGTACGTGAC---------TC----CATTAATGAATCTTCTTTTCTGCAGGCTTCCAAGCGCCAAAACTGAGG
TACGT---ACGTACTTGCCACTGTTTGATTGACTTGAAAGAAC--CACTTTCTGCTTCAAATTGTTTCTCTCCAAACTTG
TTTTGTTTCATTCTGCCTGCATTCTTGAGTTTCATCTCGCTTGTGCGAGGCGAATGAATTTAACAATGTGTGTACCGTGT
GTGTTCCCAAGGAAAATCGCGGATCAGGTTGCGGATGATGGATACTTGGTCGTGGTTCCTGATTTGCTGCACGGGGACCC
GTTCAGGGATGAGGCCAAGATTTCATTTCAAGATTGGCTGAAAACCCACTCTCCGGTTCGTTCATTTTCCGTTCTTATCC
TGCTTGTTGTATTGTTTGTAATAGTTGGTCTGTATGACTATAACGGATGGCACAATACTGAAACTCTAGCGCTCTCCCTA
AGGCTATAATGGATATGCAGACCACTTGCCATTGGTTTCCCAAGTACATTTTGAAAGAAAAGAAAAAGATGAAATTCTCT
CTCCAGCACATTACATCACATGAAAATATTCAGTATCCTACTAAGGGCATCTACCACACTTAACTGTATTTTC-------
---------------------ATGGAAAGCACACTTAATCATAAGAAATGCTGCAGCTTTTCCATCTGAATGTTTCAGTA
TCAGGATAGGAAACATAACAAATACTG-----------------------------------------------------
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-----------------------------------------------ATTTCTCTCTTGTTCGTTGCTGTTACAGGTGGA
GGCAGCTGAAAAGACTAAAGTGCTTATTGCTGCTCTGAAGAAGCAAGGGGTGTCTGAAGTTGGGGTTGGAGGTTATTGCT
GGGGTGGTGGGTTAACTCACTTCAACTACATGAACACCGAGCAATCATTGTTTTAATTTTTACCACTCCCTCCGATCCAT
ATGAATTGTTGATGATTTCTAAGTCATCGATCTAAATCATCAACAATTAATATGAATCGGAGGGAGTAGCATTCTTCAAC
TAACCGCTCCATTGTCTTTCGTAATAGCAAAAATCATCAACAATTAATATGGATCGGAGGGAGTAGCATTCTTCAACTAA
CCACTCCCTTG---TCTTTCGTAATAGCAAAGGTAGCTGTGGAGCTATCAAAGTCTGAAGAAATTCAAGTGGTTGTCATT
TCGCACCCTTCACTAGTGACTGTCGATGACATGAAGGGTGTGTGTCTTATTTCCATCTCACTTAATTAGGCTTTCCCTGC
TGATTCTTCCTCGTGTATGCTAAAAATTCACTTTCACTAGAAGAATGCGCTGCATATCCTTTTCTCTAACTCGGTAACTC
CATTTTGCATGCTCAGAGGTCAAGCATCCCATTGAGATTCTCGGAGGAGAGCTTGATCAAGCTTCTCCACCGCCGATAGT
GCACCAGTTTGAACAGGCCTTGGATCAGAACAACAAGGTACATTCTTCCTAGTAGCTTCATTTCATACTTCGTGAAGATT
GACCACTAAATTTTAATCTGCCATTTTACAGATTGACCACTTCGTGAAGATCTTCCCGGGAGTAGCCCACGGTTTCGCTT
GCAGATACAACGCCAGCGACGCGTTCGCCGTCAAAACTGCCGAAAAAGCTCGTGCAGACATGCTCAGCTGGTTCAACAAG
TATCTGAAGAAGCACCAAGAGCTTTCGCTCCACGAATCTTAG--------------------------------------
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>chr1A_1_TraesCS1A01G250100
AGAGCTTCATTGCAGCACCGCAGCCGGCGAGCTCCACGGGGGTCGCAGCACCGCG-TGTGCTGCACTGAGAGCGCCGGCG
AGCTCCATTGGAGTACCGAGCGCTGCACTGCAGCTCGACATCACACCGACGAGCGCTGCAACGCAGCACCAAGAGCCGCC
GGCGAGCGCTCCATTGCAGCACTGCCGCCGACGAGCTCCATGGGGTCGCAACGCCGCTTGTGCTGCACTGCATCTCCGCC
GCCGTCGCGAGATCCACAGGGACGCAGCTACCTCCGGCGATGAGCGGCGCCCAACTCCGGCCTCCCCGTGTT-CGCTGCA
GCACCGGCGACGAGCAGCGCCAGCCTCCGGCCTCCTGCTTCATGTTGTGGCGCCGGCCTCAGGCTCTTTCTCTTGCTTGT
GACGGTAGAGGAAAGGGGAAAAAGAGGAGGAGTGGGGGAGAAGGTCTGGAGACGAAGGAAGAGATAAGGCTTTG-CTGGT
TGCAAATGGTGTGTGGGGTCGGACACGTGGCGTGCGCTGCAGGCGGTTTGCGCAGCGTGAAAATCATCCGGCTTAAAGAG
AACGTTTTTCTTTATTTAACGCTAAAAAAAGGTTTATTTAACACCTTGTATCGGCTGTGCGACGTTATTTATGAAGCGGG
TGAAAGTGAACGCAACCGAACTGTGCGACGTTATTATGCAAAAGCGTTCGCTGAACAATCAGCCTCTGGCTGCTTATCTC
AGTAAGCCAACTCTCAGTCACATCTAATGGAACGCAACCGAACTGAACAAAGTATGTTTGCTCGACCATGGCGTACGTGG
CCGTCCCGCGTGTAGCGGCGTGTGGATATCTTTGTACTACTGCTGCCTCGCCCTCCCGCTCCATATAAACCTCGAGCGAG
CAATGCCGCACATTTCCTGGCGCG--ACACACTGCAGTACAAGCGCTCCCGCTTCCATCCGTCATCCGATTGACACGCTG
CACCAGCCAAAAAGCCACTGACCTCACAGCCTCGCTCCGCCCGCCATGGCCGCTGCCACGGTGCGGTCGACGTTGCCCCG
CTGCCTCCTCCTCCTCCTCCTCCTCCTCCTGTCCACGGCGCTTGCCTCCGCCGCCACCGCGCCGCGGCTCGTGCTCCTGG
CGCCGTCCGGCTCGCACACGCCGTGCCTGGACAACCCGCCCGACCTGACGGCCGCGGCCGACGAGGCGGGCGAGCTCGTC
CGCGACCTCGGCAGCCTCCCGGCCTACGTCACCGGATCCCGCAGCTCCACGCGC-----GCCATCGTCCTCGCCTCCGAC
TACTTCGGTCAGTGCTCAGAGTCACCGAGGCCAC----TTAGCAAGCCGAAGGAACGTCTCTGTTCCTAC----------
--TCCAGTGTACGTGAC---------TC----CATTAATGAATCTTCTTTTCTGCAGGCTTCCAAGCGCCAAAACTGAGG
TACGT---ACGTACTTGCCACTGTTTGATTGACTTGAAAGAAC--CACTTTCTGCTTCAAATTGTTTCTCTCCAAACTTG
TTTTGTTTCATTCTGCCTGCATTCTTGAGTTTCATCTCGCTTGTGCGAGGCGAATGAATTTAACAATGTGTGTACCGTGT
GTGTTCCCAAGGAAAATCGCGGATCAGGTTGCGGATGATGGATACTTGGTCGTGGTTCCTGATTTGCTGCACGGGGACCC
GTTCAGGGATGAGGCCAAGATTTCATTTCAAGATTGGCTGAAAACCCACTCTCCGGTTCGTTCATTTTCCGTTCTTATCC
TGCTTGTTGTATTGTTTGTAATAGTTGGTCTGTATGACTATAACGGATGGCACAATACTGAAACTCTAGCGCTCTCCCTA
AGGCTATAATGGATATGCAGACCACTTGCCATTGGTTTCCCAAGTACATTTTGAAAGAAAAGAAAAAGATGAAATTCTCT
CTCCAGCACATTACATCACATGAAAATATTCAGTATCCTACTAAGGGCATCTACCACACTTAACTGTATTTTC-------
---------------------ATGGAAAGCACACTTAATCATAAGAAATGCTGCAGCTTTTCCATCTGAATGTTTCAGTA
TCAGGATAGGAAACATAACAAATACTG-----------------------------------------------------
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-----------------------------------------------ATTTCTCTCTTGTTCGTTGCTGTTACAGGTGGA
GGCAGCTGAAAAGACTAAAGTGCTTATTGCTGCTCTGAAGAAGCAAGGGGTGTCTGAAGTTGGGGTTGGAGGTTATTGCT
GGGGTGGTGGGTTAACTCACTTCAACTACATGAACACCGAGCAATCATTGTTTTAATTTTTACCACTCCCTCCGATCCAT
ATGAATTGTTGATGATTTCTAAGTCATCGATCTAAATCATCAACAATTAATATGAATCGGAGGGAGTAGCATTCTTCAAC
TAACCGCTCCATTGTCTTTCGTAATAGCAAAAATCATCAACAATTAATATGGATCGGAGGGAGTAGCATTCTTCAACTAA
CCACTCCCTTG---TCTTTCGTAATAGCAAAGGTAGCTGTGGAGCTATCAAAGTCTGAAGAAATTCAAGTGGTTGTCATT
TCGCACCCTTCACTAGTGACTGTCGATGACATGAAGGGTGTGTGTCTTATTTCCATCTCACTTAATTAGGCTTTCCCTGC
TGATTCTTCCTCGTGTATGCTAAAAATTCACTTTCACTAGAAGAATGCGCTGCATATCCTTTTCTCTAACTCGGTAACTC
CATTTTGCATGCTCAGAGGTCAAGCATCCCATTGAGATTCTCGGAGGAGAGCTTGATCAAGCTTCTCCACCGCCGATAGT
GCACCAGTTTGAACAGGCCTTGGATCAGAACAACAAGGTACATTCTTCCTAGTAGCTTCATTTCATACTTCGTGAAGATT
GACCACTAAATTTTAATCTGCCATTTTACAGATTGACCACTTCGTGAAGATCTTCCCGGGAGTAGCCCACGGTTTCGCTT
GCAGATACAACGCCAGCGACGCGTTCGCCGTCAAAACTGCCGAAAAAGCTCGTGCAGACATGCTCAGCTGGTTCAACAAG
TATCTGAAGAAGCACCAAGAGCTTTCGCTCCACGAATCTTAGAAACTCGATCTCTCCAAGCTGTTTTAAACAAGTCACCC
TTTTAGTTTTGTATAAATCGACGCCTTTTCATTAGTTTAGAAGTACAGAATTA-AGGAGCTCTTGCCTTTCTGAATAAAT
TGCACATCGGTGCTGAACTTTTTAGGCGTAGCTTGGTCGTGTATGCAATGCAATAATAAAATAGTTCCTCTAGTTTGATT
CAGCTGTACTTTCTTTTTGTTCTTCTCTGCATGGGAAATTTGAGTATTTGCCTAGCATATTTATGTGCAGA---------
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-----------------------------------------------------------------------AAATTAATT
GAATGCGATGCAAGTGGTGAATGGCGGATATGAGAAATTACAGATCAACAAGGTGTCTCACA------------------
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--------------CAATGATGAAT----------ATATGATATTAC------------------ATACTACTGTATTAA
CAAATGGGTTTCTGAAAAAAAATGAAACTAAT---ATATTACAGATTTACAAGGTGTC--ACAGACAAAACCAGAAAAAA
GTTTCCGTCGCCGGGAATTGAACCCGGGTCTCTCGGGTGAGAGCCGAGTATCCTAACCACCTAGACTACGACGGAATTGC
TGTATGACATTAAGAATTCCATTTAAAGTTGAAGACACAACGGGAGGAGTAGCACCGGAAGAGT----------------
-----------AAGGAGATGAGAGGGGGTGCAACGCTGGCGGCATCTCCAACTTCTGGTTGGGTGCGGTGCGAGGAGGCC
CAGCACATTTGTTGTGGGAGAAACAACCGTGCGACGACCACACGCTCCCTTCCGTCTTCCCTCTCTCC------------
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---------------------------------------GCCTCCCCCTCTGCTTGAGAGTCGTTCAGGACAACACGGTT
TGATCCCATATACA--TCGTCGGACGGCGATGGCTAAAGAGACGCGTTCGGAATCTCCTTGTATATAATCGTGCAATCGT
TGGCCAGGTGTTGCTGTTTGGTGTCATGTCGTTGGGATGCCAACCACTAGAGTGGTGGTGGTCGTCGCCTTCATCTTCGA
CTCCATGGTGGAGGGAAGTGGAAGGTGTCGAATCCGGCAGAATTCCCCTCAATAAGCACGCGGTGCCA
>chr7D_1
AGAGCTCCATTGCAGCACCGCAGCCGGCGAGCTCCACGGG-GCCGCGACACCGCTTTGTGCTGCACTGAGAACGCCGGCG
AGCTCCGTTGGAGCACTGAGCGCTGCACTGCAGCTCGACAGCCCACCAGCGAGCACTGCAATGCACCACCAGGAGCCACC
GGCGAGCGCTCCATTGCAGCACCGCCGCCGCCGAGCTCCATGTGGTCGCAGCGCCGCTTGTGCTGCACTGCATCTCCGCC
GCCGTAACGAGATCCACGAGGGCGCAGCTACCTCCGGCGATGAGCGGCGCCCAACTCCGGCCTCCCCGTGTTGCGCTACA
GCACCAACGACGAGCAGCACCAGCCTCCGGCCTCCTCCTTCATGCCGCGGCGCCGGCCTCAGGCCCTTTCTCTCGCTTGT
GACGACAAAGGAAAGGGGAAAAGGAGGAAGAGTGGGGGAGAACGTGCGGAGACGAAGGAAGAGATAAGGCTTTGGCTGGT
GACGAACGGTGTGTGGGGTCAGGCACGTGTCGTACGCTGCAGGCGGTTTACGGGGCGTGAAAATCATCCGGCTTAAACAG
AACGTTTTCCTTT-------------------------------------------------------------------
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>chr7A_1
AGAGCTCCATTGCAGCACCGGAG-CGGCGAGCTCCACGGG-GCCGCGACACCGTTTTGTGCTGCACTGAGAACGCCAGTG
AGCTCCACTTGAGCACCGAGCGCTGCACTGCAGCTCGACAGCCCACCGGTGAGCACTGCAACGCAGCACCAGGAGCCGTC
GGCGAGCGTTCCATTGCAGCACCGCCGCCGACGAGCTCCACGTGGTCGCAGCGCCGCTTGTGCTGCACTGCATCTCCGCT
GGCATTGCGAGATCCACGGGGACGTAGCTACCTCCGGCGATGAGCGGCGCCCAATTCCGACCTCCCCGTGTTGCGCTGGA
GCACCGGCGACGAGCAGCGCCAGCCTTCGGCCTCCTCCTTCATGCCGCGGCGCCGGCCTCAGGCCCTTTCTCTCACTTGT
GATGACAGACGAAAGGGGAAAAGGAGGAAGAGTGGGGGAGAACGTGCGAAGACGAAGGAAGAGATAAGGCTTTGGCTGGT
TGCGAACGGTGTGTGGGGCTGGACACGTGTCGTGTGCTCCAGGCGGTTTACGCGGCATGAAAATCATCCGGCTTAAATAG
AACGTTTCCTTTTATT----------------------------------------------------------------
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>chr6A_1
AGAGCTCCATTGCAGCACCACAGCCGGCGAGCTCCACGGG-GTCGCAGCACCGCA-TGTGCTGCACTGAGAGCACCGGCG
AGCTCCATTGGAGCACCGAGCGCTGCACTGCAGCTCGACAGCCCACCGATGAGTGCTGCAACGCAGCACCAAGAGCCGCC
GGCGAGCGCTCCATTGCAGCACTACCGCTAACGAGCTACACGGGGTCGCAACGCCGCTTGTGCTGCACTGCATCTCCGCC
GCCGTCGCAAGATCCACGAGGACGCAGCTACCTCCGGCGGTGAGCGGCGCCCAACTCTGGCCTCC---------------
-----------------------------------TGCTTCATGATGTGGCGCCGGCCTCAGGCCCTTTCTCTTACTTGT
GACGGTAGAGGAAAGGGGAAAAAGAGAAGGAGTGGGGGAGAAGGTGCGGAGACGAAGGAAGAGATAAGGCTTTGGCTGGT
TGCGAACGGTGTGTGGGGTCGGACACGTGACGTGCGCTGCAGGTGGTTTGCGCGACGTGAAAATCATCCGGCTTAAAGAG
AACGTTTT------------------------------------------------------------------------
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>chr1B_826
TCTTTATACTC---------------------------------------------------------------------
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--------------------------------------ACTGCTGCCTCGTCCTCCCGCTCCATATAAAACTCGAGCGAG
CAAAGCCGCACATTCCCTGGCGCG--ACACACACTG---CAAGCGCTCCCGCTTCCTTCCGTCATCCGATTGACACGCTG
CACCAGCCAAAAAGCCACTGACCTCACAGCCTCGCTTCGCCCGCCATGGCCGCTGCCACGGTGCGGTCGACGTTGCCCCC
CTG------------CCTCCTCCTCCTCCTGTCCACGGCGCTCGCCTCTGCCGCCACCGCGCCGCGGCTCGTGCTCCTGG
CGCCGTCCGGCCCGCACACGCCGTGCCTGGACAACCCGCCCAACCTGACGGCCGCGGGCGACGAGGCGGGCGAGCTCGTC
CGCGACCTCGGCGGCCTCCAGGCCTACGTCACCGGATCCCGCAGCTCC-----C-----GCCATCGTCCTCGCCTCCGAC
TACTTCGGTCAGTGCTCAGAATCACCGAGACCACTTAATTAGCTACCGGAAGGAACGTCTCTGTTTCTACATTGACAACC
CGTCCAGTGTACGTGACGTGACTGACTC----CATTAATGAATCTTCTTTTCTGCAGGCTTCCAAGCGCCAAAACTCAGG
TACGT---GCGTACCTGCCATTGTTTGAATGACTTTAAAAAAGAACAATTTCTGCTTCAAATTGTTTCTCTACAAATTTG
TTTTGTTTCATCCTGCCTGCATTTTTGAGTCTCATTCCACTTGTCTGAGGTGAATGAAGTTAACGACATGTATAACT--T
GTGTACCCAAGGAAAATCGCGGACCAGGTTGCAGATGATGGATACTTGGTCGTGGTTCCTGATTTGTTGCACGGGGACCC
GTTCAGGGATGAGGCCAAGATTTCATTTCAAGATTGGCTGAAAACTCACTCTCCGGTTCGTTCATTTTCTTTTCTTATCC
TGTTTGTTGTATTGTTTGTAATAGTTGGTCTGTATGACTATAACGGATGCCATACTATTGAAACTCTATCGCTCTCTCTA
AGACTATAATGGACAGGCAGACCACTAGCCATCGGTTTCGCAAGTACATTTTGGA-------AAAAGGGTGAACTTCTCA
CTCCGGCACATTACATCA-----AAAAATTCAGTATCCTACGAATGGTATCCAGCAGACTAAATTGTTTTTTTGGTTGCA
GGAACACTATATTGTATTTCGATGAAAATCACGCTTAATCATATGAAATGCTGCAGTTTTTCCATCTGAATGTTTCAGTC
TCAGGATAGGATACATAACAG-TACTT-----------------------------------------------------
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-----------------------------------------------GTTTCTATCTTGTTCGTTCCCGTTACAGGTAGA
GGCAGCTGAAAAGACTAAAGTGCTTATTACTGCTCTGAAGAAGCAAGGGGCGTCTGAAGTTGGCGTTGGAGGTTATTGCT
GGGGTGGTGAGTTAACTTACTTCAACCACATGAACACCAAGAATTCACTGTTTTAATTTTTACT----------------
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-------------------------------------------------------------AGTAGCATTCTTCAACTAA
CCACTCCATTTGTCTCTTTCTTAACAGCAAAGGTAGCCGTGGAGCTATCAAAGTCTGAAGAAATTCAAGTGATTGTCATC
TCGCACCCTTCACTAGTGACTGTCGATGACATGAAGGGTGCTTGTCTTATTTCCATCTCACTTAATTAGGCTTTCCCTGC
TGATTCTTCCTCGTGTATGATAAAAATTCACATTCACAAGAAGAATGCGCTGCATATCCTTTTCTCTAACTCGGTAACTC
CGTTTTGCATGCTCAGAGGTCAAGCATCCCATTGAGATTCTTGGAGGAGAGCTTGATCAAGCTTCTCCACCGCCGATAGT
GCACCAGTTTGAACAGACCTTGGATCAGAACAACAAGGTACATTCCTCCTAGTAGCTTCACTTCATACTTCGTGAAGATT
GACTACTAAACTTTAATGTGCCATTTTACAGATTGACCACTTTGTGAAGATCTTCCCGGGCGTAGCCCACGGCTTCGCTT
GCAGATACAACGCCAGCGACGCGTTCGCCGTCAAAACCGCCGAAGAGGCTCGTGCAGACATGCTCAGCTGGTTCGACAAG
TATCTGAAGAAGCACCAAGAGTCTTCGCTCCACGAATCTTAGAAACTGGATCGCTCCAAGCTGTTTGGAACAAGTCCCCC
TTGTAGTTTTGAAAATCAGT--GCCTTTTCATTAGTTAAGAAGTATAGAATTA-AGGAGCTCTTGCCTTTCTGAATAAAT
TGCACATCAGTGCTGAACTTGTTAAGCTTAGCTTGGTCGTGTATGCAACGCAATAATAAAATAGCTCCTCCAGTTTGATT
CAGCTGTACTTTCCTTTTGTTCTTCTCTGCATGGGAAATTTGAGTATTTGCCTAGCATATTTATGTGCAGATTTTTTTTT
TGCGGGGTTAAAAGGATTTCATTGCTCAACTGTTGGAATATTCATTCCTACATTGCAGAGGAACGTCTGCAGGTCCAGAG
CGCAACCAAACTGCAGTTCGGCCCTCCGACCGTCCAAAACAGCAAGTGTGTGGCTAACAACGTTCTGATTCCTACTTACA
TGAGCAATAGAGATATCCCTTTCACCAAAGAGCCTCTTAATATCCTGAACTATCATTCTATGTGGCGATCTGTCAAGGGT
AGGCGACTTGATCAACTTGATCGCATCCATGCAGTCCATCTCGATGTCTATCGGGCGAGTAGACCATTGTAGAGCAAGGC
TTAATCCCTCCTGACATGCCAACAGCTCAGCCTGGAGCGGTCCAGAACAATGCAAGATAGAACGACAAGCGGAGAAGATA
ATGTTGCCCTCACTATCACGTAAGATCATACCGGCTCCTGCTAATCCACCATCGGTATCAACGAACGACCCATCAACATT
GAGCTTCACGCGACCGGCTGGCGGGGCAGACCACTGGACTGTGGCTGCATGTTGCGTTGATGTATTTATCATTGTAGAAC
TATACCCAATCGGCGGCAGCACCATCTTCCCTTTGATGATGTCAGTGGTTGGAAAATGGCTGATGCATCGAAGAGATTCA
GCATAGCTAATTAGAAATCTGCAGGAAGCTTCAATTGGAGGTGGTAGCTTGTGATATACTATTTCATTACGTACATACCA
ACTCCTCCACAGCACCATCAACACATGCATGCGATCATCTTCATTTAGCTCGTACAGAAGATCAAAAACCCACTCAGGGC
TTGTATTCCTCACTGAAGCTAAGTCCGGCAATAACCATTTTTCCTGCATGGCGTTCCACAAAGCAACAGCCAATGGGCAT
CTACAGAATGTGTGGAATGTGTCCTCCGGTTCCATCGCACACATCGGACAAAGGTTAGACACCTCAAGTTTTCGTGATTT
TTTATTCACCCAAGTAGCCAGTGAATTTGTGACCAAACGCCATGCAAAGATACGCACCTTTGGTGGAGCAGGGCACCTCC
ATATAAGTGCCCAGATGGCACGTCGCCCGTCCGGTGCCCTACTCGATGCGACTGTAGTCTGACGGTGAATCTCGTCATAT
GATAGACGATAAGCACTCCGAACTGTGAATGATCCAGAACGCTCAGGCGCCCAAGCGATAATATCTTTGTCCAACCGTGG
CACCACCTTGATCTTCATAATTTCCATGACATCTACCGACATCAAATGTTGATTAAGTAGTTGCACGTTCCAATTTCCTC
GGTCGTCCAGGAGCTCGCTAACACGCCGAAGATGGCAGTGCCCCTGGGGTGATATTGGCAACCTCGCAAGTGGATGTGGT
ATCCACTGGGCACGCCAAATACGTACAGAAGCACCATCACCAATGCGCCAAATTAGACCTTTCTTGAGAAGCTCAAGACC
ATGGACAATAGACTGCCACGTCTGGAATGAGTTGCCCGAAAAGACTGTATCTTCCAGACGTCCCGCCGGGTAATATCTTG
CTTTCAGCACCTGCGCACATAAATTGTCAGGGTAAGCAATAACACGCCAAGCCTGTCTAGCCAGAAGTGCCTGATTGAAG
AGTCTGAAATCACGGAACCCCATGCCGCCTTGCACTTTCGGTTTAATCAATGTATCCCATGCACGCCAATGTGTCTTCCT
CTTCCCCTCCTTGGCCCCCCACCAAAAATTGCGTACCATGCGAGTAAGGTCATCACAAACACTCCGGGGCAAACGGAAAA
CCCCCATGATATATGTAGGTAGGGACTGCGCAACCGCCTTAATGAGAATTTCTTTGCCCCCTTGTGACGCCGCTTCTCCC
CACTGTAAGATCCACTTAGTAAGTTGCTCTTGTAGATTTTGAAACTTGCCCTTCGACATTCTACCAGATGGTGTGGGGAG
ACCGAGATACTTATCGTCGAATCCCACCGTCTGAACCTGCAAGGTATGCACAAACCTCCTGCTTGTCGTTGTCACCACAA
CATGGGCCAAATAAAATAGAACATTTCGCCGGGTTAATGAATTGTTCGGTGGTGCGCTCATAAATAGCTAGTGCATCTCT
AACCTGGGTAGCTTCTTCCTGAGTAGCACGGAAGAACATTAATGTGTCGTCTGTGAATAGGAGGTGTGAGATAACTGGTG
CCCTTGGACACACATGAATAGGAGAAATCCTTCCTTGTCTGACCTTCTGTTTCAAAATAGCATCAAGTCCATCAGCTACG
AACAAAAACAAAAACGGGGATAGAGGGTCGCCCTGCCGAAGTCCACACGACGGTGCGAACGTATGTGCAGAAAATTAATT
GAAAGCGATGCAAGTGGTGAATGGCGGATATGATAAATTACAGATCAACAAGGTGTCTCGCA------------------
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--------------CAATGATGAATGGTGGAGCTGATATGGTATTACTCCGGACGGAGGAAGTACATATTATTA----AC
AAAAGGTGTTCCTGAAAAAAAAAAATATTACAGA------------TTACAAGGTGTCTCACACACAAAAACAAAATT--
-TTTCTGTCGCCGGGACTTGAACCCGGGTCTCTCAGGTGAGGGCCAAGTATCCTAACCACCTAGACTACGGCGGAACTGT
TGTAAGACGTTAAGAATTCTTCCAATAGTTAAATACACGGTGGGAGGAGTATCACCAGCAGAATCG--------------
-------------GGAGATGAATGGGGGCGCAGCGATGGCGGCATCTCCAAAC-CTGGTTGGATGCGGTGCGAGGAGGTC
CAACACTTTTGCTGCAGGAGAAACACCCGTGAGACGACCACACGCTCCTTTCCGTCTTCCTTCTCTCCTTTATTTTTGCG
GGAAAGGAACTCCGTCTTCCTTCTCTCTGTCTCCCATCAGTGGCGTAGCCAGCCCAATGTGCCAGGCTGATCCATTGATA
GAAATATTTACATAAGATTATTTATTTTTTAAAATATTTTTTAATGCACTATATACAAGCTACGGGGAAATTTCAGGATG
GTCCATGTACCACGCTGGCCACCCCCTAGCTACGCCACTGCCTCCCACTCCACTTCGGAGTCGTTTAGGACATCCCGGTC
GGTTTAACCCCATGCTTCGTCCGACGGCGATGGCTAAAGAGATGCGTTCGGAATCTCCCTGTATATAGTCATGCAATCGT
TGGCCAGGTGTTGCTATTTGGTGTTATGTCGTCGGGATGCCAACCACGAGAGTGGTGATGGTCATCATCTTCTACTCCGA
CTCCATGGTGGAGGGAAGTGGAAGGTGTCAAATCCGGCAGAATTCCCCTCAATAAGCACGTTGTGCCA
>chr1D_827
-CTTTGTACTC---------------------------------------------------------------------
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--------------------------------------ACTGCTGCCTCGTCCTCCCGCTCCATATAAAACTCGAGCGAG
CAACGCCGCACATTCCCTGGCGCGACACACACACTG---CAAGCGCTCCCGCTTCCTTCCGTCATCCGATTGACACGCTG
CACCAGCCAAAC-GCCACTGACCTCACAGCCTCGCTTCGCCCGCCATGGCCGCTGCCACGGTGCGGTCGACGTTGGCCCC
CTGCC------TCCTCCTCCTCCTCCTCCTGTCCACGGCGCTCGCCTCCGCCGCCACCGCGCCGCGGCTCGTGCTCCTGG
CGCCGTCCGGCTCGCACACGCCGTGCCTGGACAACCCGCCCGACCTGACGGCCGCGGGCGACGAGGCGGGCGAGCTCGTC
CGCGACCTCGGCGGCCTCCAGGCCTACGTCACCGGATCCCGCAGCTCC-----CCGCGCGCCATCGTCCTCGCCTCCGAC
TACTTCGGTCAGTGCTCAGAATCACCGAGACCATTTAATTAGCTACCGGAAGGAACGTCTCTGTTTCTACTTTGACAATC
AGTCCAGTGTACGTGAC---------TCACTCCATCAATGAATCTTCTTTTCTGCAGGCTTCCAAGCGCCAAAACTCAGG
TACGTAGTACGTACCTGCCATTGTTTGAATGACTTAAAAAAAAAAA---TTCTGCTTCAAATTGTTTCTCTACAAATTTG
TTTTGTTTCATCCTGCCTGCATTCTTGAGTCTCATTCCACTTGTCTGAGGTGAATTAAGTTAACGACATGTATAACT--T
GTGTACCCAAGGAAAATCGCGGACCAGGTTGCAGATGATGGATACTTGGTCGTGGTTCCCGATTTGTTGCACGGGGACCC
TTTCAGGGATGAGGCCAAGATTTCATTTCAAGATTGGCTGAAAACTCACTCTCCGGTTTG---------------TATCC
TGCTTGTTGCATTGTTTGTAATAGTTGGTCTGTATGACTATAACGGAAGGCACAGTACTGAAACTCTAGCGCTCTCCCTA
AGACTATAATGGATATACAGTCCACTAGCCATCGGTTTCCCAAGTACATTTTTGA-------AAGAAAAAAAAAATCTCT
CTCCAGCACATTACATGA-----AAATCTTCAGTAACCTACGAATGGCATCTAGCACACTTAACTGTATTTT--------
----------------------------------TTAATCATAAGAAATGCCGCAGTTTTTCCATCTGAATGTGTCAGTC
TCAGGATAGGAAACAAAACAG-TACTAGGTGGAGGCAGCTGAAACTTCAATGTGCCAATTTACTACCAGATGTGTAAACA
GTACTAGGTAGACGGCGCATTGAAGTTTACTAGTACGAGCTGCCTCCACCTAGTAGTCAATCTTCAATGTGCCAATTTAC
TACGAGCTGCCTCTCCAGCACATTGAAGTTTAGTAGTCTCAGGAGTAGTTTCTATCTTGTTCGTTGCCGTTACAGGTGGA
GGCAGCTGAAAAGACTAAAGTGCTTATTGCTGCTCTGAAGAAGCTAGGGGTGTCTGAAGTTGGGGTTGGAGGTTATTGCT
GGGGTGGTGAGTTAACTTGCTTCGACCATATCAACACTGAGCATTCATATTTTCAACGTTTATTACTAC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTAGCATTCTTCAGCTAA
ACACGCCATTTGTCCCTTTCTTAACAGCAAAGGTAGCCGTGGAGCTATCAAAGTCTCAAGAAATTCAAGTGGTTGTCATC
TCTCACCCTTCACTAGTGACTGTCGATGACATGAAGGGTGCGTGTCTTATTTCCGTCTCACTTAATTAGGCTTTTCCTGC
TTATTCTCCCTCGTGTATGCTAAAAATTCACATTCACAAGAAGAATGCGCTGCATATCCTTTTCTCTAACTCGGTAACTC
CATTTTGCATGCTCAGAGGTCAAGCATCCCATTGAGATTCTCGGAGGAGAGCTTGATCAAGCTTCCCCACCGCCGATAGT
GCACCAGTTTCAACAGGCCTTAGATCAGAACAAGAAGGTGCATTCCTACTAGTAGTTTCATTTCATACTTCGTGAAGATT
GACCACTAAATTTTAATGTGCCATTTTACAGATTGACCACTTTGTGAAGATCTTCCCGGGCGTAGCCCACGGCTTTGCTT
GCAGATACAACGCCAGCAACGCGTTCGCCGTCAAAACCGCCGAAGAGGCTCGTGCAGACATGCTCAGCTGGTTCAACAAG
TATCTGAAGAAGCACCAAGAGCTTTCGCTCCACGAATCTTAGAAACTCGATCGCTCCAAGTTGTTTTGAACAAGTCGCCC
TTTTAGTTTTGAAAATTAGCGCC---TTTCATTAGTTCAGAAGTATGGAATTATAGGAGCTCTTGTCTTTC-GAATAAAT
TGCACATCAGTGCTGAACTTGTTAGTCCTAGCTTGGTCGTGCATGCAATGCAATAATAAAATAGTTCCTCTAGTTTGATT
CAGCCGTACTTTCCTTTTGTTCTTCTCTGCATGGGAAATTTGAGTATTTGCCCAGCATATTTATG---------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TGCAGAAGATTAATT
GAAAGCGATGCAATTGGTGAATGGAGGATATGATAAATTACAGATCAACAAGGTGTCTCGCATAGGGCTGGAAAAAAAGC
TCGAAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCTAATCGACTCAAACTCGAAGAATAACGAGTCGAGCCGAG
CTTTAGTTTAAGATTGTTTATAGACCAAGTTAAACAAGCCAATCACACGAGTACTCGTGTAACTCGTTAGGCTCGGTACA
ATAGATCAGCCAATCCCAATACAAAAAAAATCAGCCACTCAGCTCAGCCGCCTAGGAGACTCATGCGTTACAAGGAAATT
ACAATTGTTTAGTGATATATATGTTTAATATATATATAATCATTTTTTATCATATTTGAGGGCTTTATGTTCATATCTTG
AACGAGCTTAACAAGCTAAACGAGCCAGCTCGCGAGTTATACGAGTCGAGCCAATCTTGGGTTTGAGCTCGTTATAGTAA
CGAGTCGAGTCGAGCTAGCTCGTTAACGAAAGGAGCTCTAGCGAGTCGAGCCGAGTTGGCTCGACTCGGCTCGAATTCCA
GCCCTAGTCTCGCACAATGATGAATGGTGGAACTGATATGGTATTAC------------------ATACTATTA----AC
AGAGTTTGTTCCTGAAAGAAAAAAAAACCAATATAATATTACAGATTTACAAGGTGTCTGACACACAAAAACAGAAAAAA
GTTTCCGTCGCCGGGACTTGAACCCGGGTCTCTCGGGTGAGAGCCGAGTATCCTAACCACCTAGACTACGACGGAATTGC
TGTACAGTGTATAGCATTCCGTAGAAAG-TTAAGACACAACAGGAGGAGTAGCACCGAAAGAGTTTTTTTTTAGTTGAGC
ACCGGAAGAGTAAGGAGATGAGAGAGGGTGCAGCGCTGGCGGCATCTCCAACC-CTGGTTGGGTGCGGTGCGAGGAGGCC
CAACACATTTGCTGTGGGAGAAACACCCGTAAGACGACCACACGCTCCCTTCCGTCTTCCTTCTCTCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GCC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>SNPs
----------------------------------------S-------------S-------------------------
-------------S--------------------------S-S-------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------S-------------------S---------------
---------------------------------------------SS---------------------------------
---S--S----------------------S-----------------------S--------------------------
--------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S------------------S----------
---S----------S-----------------SSSSSSS-----------------S-----------------------
------------------------------------S------------------------------------------S
-----SSSSSS-------------------------------S-------------------------------------
---------------------------------------------------------S----------------------
------------S------S----------------------------SSSSS---------------------------
--------------------S--------S-------------S-S-S-----------------S--------------
----------------------------------------------------------------------------S---
--------------S-----S-------S------S---S--S----S-----------------------S----S---
-----------S------------------S----SS-S-----SS----S-------S-----S-SS---S--S-SSS-
----S------------------S--------S---------------------------------S-------------
---------------------------------------------S-----------------------SS---------
------------------------------------------------------S-------------------------
--S-----------------------S-----S--------------------S-SSSSSSS------------------
------------------SSSSS------------------S--S--------S------------------S-------
------------------------S---S---S-----------------------S----------------------S
--------------------SS----S-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S-----S-------------S------------
--------------------------------------------------------------------------------
---------S-------S--------S----------------S-------------------S---S-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
-------S--S---------S---S------------S-----------------------------------------S
----------------------------------------S---------------------------------------
-------------------------------S-----S------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-----------------S------------------------S-----------------S-----------S-------
-------------------------------------S------S-S---------------------------------
----------------------------------------------------S--------------S--------S---
-----------S-S-SSSSSS----------------S-------S----------------------------------
--------S-----------S------S----------------------------------------------------
-------------S------------------------------------------------------------------
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---S-----------------------------S-------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S------------------------------S-SSSSS-S
S-----S---S-----------SS---------------------------------------S------S---------
----------------S---------------------------------------------------------------
----S---S-----------S-SS------S-------------------------------------------------
--------------------------------S-------------------SS--------------------------
--S--------S-------------S-----S----------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---SS---SS--------S------S-S----S
S-S-SSSSSSS-SS-------S--------------------S---------------S--------S--S---------
---------------S--------S-------S--------------S---------S-----S--SS----SS--S---
-----------------------------S------------------------------SS------
>forward_657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GGG
TGAAAGTGAACGCAACC---------------------------------------------------------------
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--------------------------------------------------------------------
>reverse_2563
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--ACCGCTCCATTGTCTTTCGT----------------------------------------------------------
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--------------------------------------------------------------------
>forward_830
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----------TGTAGCGGCGTGTGGATATC--------------------------------------------------
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--------------------------------------------------------------------
>reverse_2609
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------------------------------------------------ATGGATCGGAGGGAGTAGCA------------
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>forward_2582
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--ACCGCTCCATTGTCTTTCGT----------------------------------------------------------
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>reverse_7128
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-------ATATACATCGTCGGACGGCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
