>input_sequence_39815
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---------------------------------------------------------------------------ATGGC
GGAGTCCCTCGACATGTCCCTCGAGGACATCATCAAGAGCAACAAGAAGGGCAACTCCTCGTCCGGCGGGGGTGGCCGCC
GCCGCGAGGGTCGCCGCGGATCTGCC------------------------GCCGCCGCCGGAGGCGTCGGCCCCAACAGG
CGCGCCTTCAAGAGGTCGGGGAACAGGGCGGCGCCCTACCAGCCGCCGAAGGTACGAACGAATCGCACGGGCTATGCTTC
GCGCCGTCGGCGGAGGATGGTCTTCCGCTTTCGCCGAGGCGGGGGAGGATGATCTGGTGGTTTTCTCACTCTGGTGTGAC
GCGATCCAGGCCCCGGAATCGGCGTGGCAGCACGACATGTACTCGGACGCCTCTGCGAGAGGCGGCGGCGGCGGGAGGGT
CTCGGCTATCGAGACCGGCACCAAGCTCCTCATCACCAATTTGGACTTCGGCGTCTCAACCGAGGACCTCAAGGTATATA
CGTCGCCGGATCTACATGTCCAGTTGTTGCTCTCATGTAATTTGGCTG------A----GTAGTTGGTCTCAAAGAATCT
CGTAGTTTCCCTGGATGTTGTATTAGTCGATCTATTTTATAGATCTGGCACAGACTCAGTACCATAACTGTGATTTGGTC
GTGCTAGTAGCCTCGCGTTGTTGAATTTTCTTAGCTGTTTTTTTTTGAGAATTTCTTAGCTTGTTTCTGTGAGTAGGACT
TTAGTTCTCAATTATAGTTAATTGTTAATGGTTGTTTGGAAGGGTGTGACCTCTTTACTGGCGTGGTTATGTTTTCAATT
GCGCTGCCGTAGTCTCGATTTGATATGTTTAATTGAT---TTTTTTGC--ATCTTATTGCATACTTCATAAGTTGACAAA
GTTGCTCACATGGAAT----CTTTTACTTGTTATG------GTCTCTCAGTTTGTATATTTTACTTAAATGTTGATATGC
T-CTCTATAGAATGCTTTTTGCAGTTTCCTGTTCATACGGCATTGTTCCTGAGTTATTTTTTCTT-TGAATGGTTCAGGA
GCTTTTCTCCGAGCTGGGTGATGTGAAGCGATGCTTGATTCACTATGACCGAAGTGGGAGGTCTAAGGTACTGATCCAGC
CTTATGTTTTTCTTTGTTCCAT-------GTGTGTGTTCTGTGTGATGCCTAATATTACTTATGTTCTGTAGGGAACAGC
TGAGGTTATATTTGCAAGGCGTGGTGATGCTGTTGCAGCGCTGAGGAAATACAACAATGTCCAACTTGATGGCAAGCCTA
TGAAAATAGAGATACTTGGGACTAACACTCCTACTGCTCCAGCCGCACTACCGACCAATAATGGAAGCTATGCTAGGAAT
GTTGCTAAGAGGTATGTTAGATTTGGCGCATTGCTTATTTGTGGATTCAGTTTATTGCAATTAAAGTATCTGAATTTGCC
TGTTTGCTAGAATTGTTCATAAAGTCTTGTGTGATTTTAAATGTTGTGGATGGTGAATTGGTGATAATACAATTGCTATT
ATATATCTCAGAGGTGTTCCATTATATATCGCCCAATATTTCAGGAGACATTATATAACA-GTGGGTGGTCGCCGTGTTG
CAATGGGCATCACATTTAGTTTGTTCTTAGTTTGTAGGGGTATTAGCAGAAGTGAATTATGAATTTCATTTTCATGAATT
CATCTTTTTCTACATAGTTAGCTGGTTAGGTTATCTAGCATATTAACCATGTTCTACCATTTTCCTGCTTTATTGAATGT
TTATAGGTGCACCTTTTGTTGCTTTGTCTGTTAGCAGTAGATTTTCCCACCTTACCGTACACCACTTCATTTGTTACAGT
GCACCAAGGGGTGTCTCAGCTAGTTTGCCACAGAACAGACCCCGTGCAAGGGGTGGGAGGGGTCGCCGTGGCGGTGGCGG
AGGCAGTGGATCTGGCGGTCGTCGTGGGAAAGAGCGTAGTCAGCCAAGGTCTGCTGAAGAACTTGATGCTGAGTTGGAGA
AGTACCATGCACAGGGTACGACGCCGATGCAGACCACCGAATAA------------------------------------
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---------------------------------------------------------
>chr4A_1_TraesCS4A01G099300
AAGACACATGTGACCAACGAACATAGACAAATGAGGAGTGGGAGGCCGTTGTGTGTGGACGCTAGCGCCCATCGATATAT
ATGGGCTCATATTAGTCCAATGCGGTTGTAAATGGTCTAGTGTCATAGGCCCTGTTTGGTTCGGCTGTGGATTTCTAAAA
GCAGCTGTGAAAAATCTACTGTAGAAAAACAACTGTGAAAAATTTGATGTGAAAAAGATGTAGGTCATTTGGCAACCCAG
CTGATACAGCTTTTTTAGATTTTGGCCCGCAACGGAATCAGATTTTGGAAAGCACGTCCTGAGCTGCTTCCACTTTTGGT
TCAGATTTTGACAGCGGATTTCTGGAATCAGATTCTGCTGGGTTCGCCCTTTGGTTTAGATTCTGCTGCGTGGCAGCGGA
ATCCGTCGATAAAAGCCGAACCAAACAAGGCCATAGTGTCATACGAAAGCCACTTTCATGGCCGCCTAAAGCTGCCGAGT
TCAACTCGGAGAAGGCACGCCGCACGCGGAAGTCATATCCCGATTTGGATAGTTCTTTTTTTTTGAATTGTAAGTATAGT
TCCGGTTAGTTTTCCCCACACAACAAAAAGGTCTTGTTTTTTCTTGAGCAGAACAAACAAGTTCTGCTTTTAAACTGGTT
TGGCATAATGATGCGAAAAGAAAAAAACTGGTTTGCCATAATGGAATTTGTAGGAAGGGAGAACGAGCCCAGCAAG---G
TAGAGTCCGGTCCGACCGCGAAGGCCCGAACCGACCCAGCCA--AAACAATCCCCGTCGCGCCCGCGTGGGTCGTGACTC
GTGCGC------------CCCCACCCCACCTTACCACCACGCGTTCTCCCTACGCGT----------ACTATTTTAT---
--CGCGCCCGCCTCCCGCAAAAATATCTCCCAAATTCCCCGACACACCACGACTTGGCAACCCTAATCAGCTTCCCCAAC
CAATTC--GATTCCCCGTCGCCGAGCTCCCCC-TCCCAACCCTAGCGCCAGATCCGCCCGCTCGCCCGCGCAGCCATGGC
GGAGTCCCTCGACATGTCCCTCGAGGACATCATCAAGAGCAACAAGAAGGGCAACTCCTCGTCCGGCGGGGGTGGCCGCC
GCCGCGAGGGTCGCCGCGGATCTGCC------------------------GCCGCCGCCGGAGGCGTCGGCCCCAACAGG
CGCGCCTTCAAGAGGTCGGGGAACAGGGCGGCGCCCTACCAGCCGCCGAAGGTACGAACGAATCGCACGGGCTATGCTTC
GCGCCGTCGGCGGAGGATGGTCTTCCGCTTTCGCCGAGGCGGGGGAGGATGATCTGGTGGTTTTCTCACTCTGGTGTGAC
GCGATCCAGGCCCCGGAATCGGCGTGGCAGCACGACATGTACTCGGACGCCTCTGCGAGAGGCGGCGGCGGCGGGAGGGT
CTCGGCTATCGAGACCGGCACCAAGCTCCTCATCACCAATTTGGACTTCGGCGTCTCAACCGAGGACCTCAAGGTATATA
CGTCGCCGGATCTACATGTCCAGTTGTTGCTCTCATGTAATTTGGCTG------A----GTAGTTGGTCTCAAAGAATCT
CGTAGTTTCCCTGGATGTTGTATTAGTCGATCTATTTTATAGATCTGGCACAGACTCAGTACCATAACTGTGATTTGGTC
GTGCTAGTAGCCTCGCGTTGTTGAATTTTCTTAGCTGTTTTTTTTTGAGAATTTCTTAGCTTGTTTCTGTGAGTAGGACT
TTAGTTCTCAATTATAGTTAATTGTTAATGGTTGTTTGGAAGGGTGTGACCTCTTTACTGGCGTGGTTATGTTTTCAATT
GCGCTGCCGTAGTCTCGATTTGATATGTTTAATTGAT---TTTTTTGC--ATCTTATTGCATACTTCATAAGTTGACAAA
GTTGCTCACATGGAAT----CTTTTACTTGTTATG------GTCTCTCAGTTTGTATATTTTACTTAAATGTTGATATGC
T-CTCTATAGAATGCTTTTTGCAGTTTCCTGTTCATACGGCATTGTTCCTGAGTTATTTTTTCTT-TGAATGGTTCAGGA
GCTTTTCTCCGAGCTGGGTGATGTGAAGCGATGCTTGATTCACTATGACCGAAGTGGGAGGTCTAAGGTACTGATCCAGC
CTTATGTTTTTCTTTGTTCCAT-------GTGTGTGTTCTGTGTGATGCCTAATATTACTTATGTTCTGTAGGGAACAGC
TGAGGTTATATTTGCAAGGCGTGGTGATGCTGTTGCAGCGCTGAGGAAATACAACAATGTCCAACTTGATGGCAAGCCTA
TGAAAATAGAGATACTTGGGACTAACACTCCTACTGCTCCAGCCGCACTACCGACCAATAATGGAAGCTATGCTAGGAAT
GTTGCTAAGAGGTATGTTAGATTTGGCGCATTGCTTATTTGTGGATTCAGTTTATTGCAATTAAAGTATCTGAATTTGCC
TGTTTGCTAGAATTGTTCATAAAGTCTTGTGTGATTTTAAATGTTGTGGATGGTGAATTGGTGATAATACAATTGCTATT
ATATATCTCAGAGGTGTTCCATTATATATCGCCCAATATTTCAGGAGACATTATATAACA-GTGGGTGGTCGCCGTGTTG
CAATGGGCATCACATTTAGTTTGTTCTTAGTTTGTAGGGGTATTAGCAGAAGTGAATTATGAATTTCATTTTCATGAATT
CATCTTTTTCTACATAGTTAGCTGGTTAGGTTATCTAGCATATTAACCATGTTCTACCATTTTCCTGCTTTATTGAATGT
TTATAGGTGCACCTTTTGTTGCTTTGTCTGTTAGCAGTAGATTTTCCCACCTTACCGTACACCACTTCATTTGTTACAGT
GCACCAAGGGGTGTCTCAGCTAGTTTGCCACAGAACAGACCCCGTGCAAGGGGTGGGAGGGGTCGCCGTGGCGGTGGCGG
AGGCAGTGGATCTGGCGGTCGTCGTGGGAAAGAGCGTAGTCAGCCAAGGTCTGCTGAAGAACTTGATGCTGAGTTGGAGA
AGTACCATGCACAGGGTACGACGCCGATGCAGACCACCGAATAAATCGACATCTTTGCAGCCTTGATATTTCAACATGAA
ATTTGAAGGGGCGCCCCTTTGTTCCCGCTTTTTGTGCTACTATATGTTCAAGGGACAACAAAACCTTTTACTTGTCAGGT
TCTTGGCTTACTGAATTGTATGGGTTATGTGT-CTACATAGAACTAGAGTTGAATGGATACCGGTCAACCGGTGAACACT
ACTGTTATGAACATTACTTGATTGCCTTTAGTTTCTGCCTTCCTTGAGGAACGCAAGGACTAAGGACCACCCAAGTTGCT
CCGCATGTGAAAGTTATTGAAGATGTATGAGGTGCTCACATTCCTTTGCCGCCAATCTATCATGAGGCTGAAATTCAGAT
GTGCCATGGTGATCAAGCTAAACCCTTATTTTGGGTGGTCTTTGGGCGTTGTTTCCCCGCTGAACGATCTTTTAAGCTTC
AGCCATCTTTAGTAAGAGGTATGTTTCCCTATCTGTTTACATTTCTTCAGTTAGTTGGTATACTTTATTCATGGCTTTAA
TAATCATTTTCTCTCAAATTGCAGGTGGTTGCTACTCTTATGTTATTATTATGCTAGCATTGCTTTATTCTCTTGCCCAT
AGCAAAACCACATGCCAACTGGAGACGTTGTGTGATCTTCCTTCCCCAGGTGCTTAACAAGTTACCTGGTATGGTTATTG
TGGCTTTGCTAATTGTGCTTCTTCATAAGCAAGGTGCAAATCTAGCAATATTCTCTTCACGTACCGAGTCACATGCCAGC
TGGAGGGGTACTGTTCTTTTAGAAGTTTTGCGTGATCTTCCTTCTTCAGGGGTCAACAAAGTGTCTGATATGA-------
-------------------------------------------GTATGGTGGATTCGCTAGTTGGGCTTC-TTACTGAAG
AAGCATTAAGGTGCAAATCTTGCTTTGCGATCTGTTAACAGTTAAGGGTTGCCAATTGGTTTGGTGGTGCACAGATTTCC
CATTCGTTGGACGCCCCTTTGGCCCC-TTGCAGCTGCTGACTTCATTTATGATGGTT
>chr4D_434
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------TAGTGTCATACGAACGCCACTCTCATGGTCGCCTAAAGCTGCCGAGT
TCAACTCGGAAAAGGCAA-------GCGGAAGCCATACCCCGATTCGGATAGTTCTGTTTTTTTTTAATTGTAAG-TAGT
TCCGGTTGGTTTTCCCCGCACAACAAAAAGTTCTGCCTTTTTCTTGAGCAGAACAAACAAGTTCTGCTTTTAAACTGGTT
TGGCATAATGATGTCAGGAAATAAAAAGTGGTCTGGCATAATGGAATTTGTAGGAAGGAAGAACGAGCCCACCAAGGTAG
TAGAGTCCGGTCCGACCGCGAAGGCCCGAACCGACCCAGCCA--AAACAATCCCCGTCGCGCCCGCGTGGGTCGTGAGTC
GTGAGTCGTGCACCCCCACCCCACCCCACCTCACCACCACGCGTTCTCCCTACGCGTCCCCCCCCCTACTATTTTATCGC
GCCGCGCCCGCCTCCCGCAAAAATATCTCCCAAATTCCCCAACGCCCCACGACTTGGCAACCCTAATCAGCTTCCCCCAC
CAATTCTCGATTCCCCGTCGCCGAGCTCCCCC-TCCCAACCCTAGCGCCAGATCCGCTCGCTCGCCCGCGCAGCCATGGC
GGAGTCCCTCGACATGTCCCTCGAGGACATCATCAAGAGCAACAAGAAGGGCAACTCCTCGTCCGGCGGGGGTGGCCGCC
GCCGCGAGGGCCGCCTTGGATCTGCCGCCGCCGGCAGCGGCGCGGCCGCGGCCGCCGCCGGAGGCGTCCGCCCCAACAGG
CGCGCCTTCAAGAGGTCGGGGAACAGGGCGGCGCCCTACCAGCCGCCGAAGGTACGAACGAATCGCACGGGCTAGGCCTT
GCGCCGTCGGCGGAGGATAGTCTTCCGTTTTCGCCGAGGCGGGGGAGGATGATCTGGTGGTTTTCTCACTCTGGTGTGAC
GCGATCCAGGCCCCGGAATCGGCGTGGCAGCACGACATGTACTCTGACGCCTCTGCCAGAGGCGGCGGCGGCGGGAGGGT
CTCTGCTATCGAGACCGGCACCAAGCTCCTCATCACCAATTTGGACTTCGGCGTCTCAACCGAGGACCTCAAGGTATATA
CGTCG-CGGATCTACATGTCCAGTTGTTGCTC--ATGTAATTTGGCTGCTTCTTAGTACGTAGTTGGTCTCAAAGAATCT
CATAGTTTGCCTGGAGCTTGTATCAGTCAAGCTATTTTATAGATCTGGCACAGACTCAGTACCACAACTGTGATTTGGTC
GTGCTAGCAGTCTTGCGTTGTTGAAT-------------------------TTTCTTAGCTTGTTCCTGTGAATAGGACT
TTAGTTCTCAATTGTAATTAATCGTTAATGGTTGTCTCGAAGGGTGTGACCTCTTTACTGGCGTGATTATGTTTTCAGTT
GCGCTGTGGCAGTCTCGATTTGATTCGTTTAATTGATGATTTTTTTGCATATCTTATTGCTTACTTCATAAGTTGAC---
---GCTCACTTGGAAT-----TTTTTCTTGTTATG------GTCTCTCAGTTTGTATAGTGTACTTAAATGTTGATATGC
T-CTCCATAAAATGCTTTTTGCAGTTTCTTGTTCATAAGGTACTGTTTCTGAGTTATTTTTTCTT-TGAATGGTTCAGGA
GCTTTTCTCCGAGCTGGGTGATGTGAAGCGATGCTTGATTCACTATGACCGAAGTGGGAGGTCTAAGGTACT--------
----------TCTTTGTTCCATTTTCCATGTGTGTGTTCTGTGTGATGCCTAACAGTACTTATGTTCTGCAGGGAACAGC
TGAGGTTATATTTGCAAGGCGTGGTGATGCTGTTGCAGCGCTGAGGAAATACAACAATGTCCAACTTGATGGCAAGCCTA
TGAAAATAGAGATACTTGGGACTAACACTCCTACTGCTCCAGCTGCACTACCAACCAATAATGGAACCTATGCTAGGAAT
GTTGCTAAGAGGTATGTTAGATTTGGTGCATTACATATTTGTGGATTCAATTTATTGCAATTAAAGTATCTGAATTTGCC
TGTTTGCCAGAATTGGTCATAAAGTCTTGTGTGATATTAAATGTTGTGGATGGTGAATTGGTGATAATACAATTGCTATT
ATATATCGCAGAGGTGTTCCGTTATATATCGCCCAATATTTCAGGAGACATTATATAACAAGTAGGTGCTCGCCGTGTTG
CAATGG-CATCACATTTAGTTTGTTCTTAGTTTGTAGGGGTATTAGCAGAAATGAATTATGAATTTCAGTTTCAAGAATT
CATCTTTGTCTACATAGTTAGCTGGTTAGGTTATCTAGCATATTAATCATGTTCCACCATTTTTCTGCTTTATTGAATGT
TTATAGGTGCACCTTTTATTGCTTTGTTTGTTAGTAATAGATTTTCCCACCTTACCGTACACCGCTTCATTTGTTACAGT
GCACCAAGGGGTGTCTCAGCTAGTTTGCCACAGAACAGACCCCGTGCAAGGGGTGGGAGGGGTCGTCGTGGTGGTGGCGG
AGGCAGTGGATCTGGCGGTCGTCGTGGGAAAGAGCGTAGCCAGCCAAGGTCTGCTGAAGAACTTGATGCTGAGTTGGAGA
AGTACCATGCACAGGGTACGACGCCGATGCAGACCACCGAATAAATCGACATCTTTGCAGCGTTGATATT-CAACATGAA
ATTTGAA-GGGTGCCCCTTTGTTCCCGCTTTTTGTGCTACTATATGTTCAAGGGACAACAAAACCTTTTACTTGTCAGGT
TCTTGGCTTACTGAATTGTATGGGTTATGTGT-CTACATAGAACTAGAGTTGAGTGGAT--------ACCGGTGAACACT
ACTGTTATGAACATTACTTGATTGCCTTTAGTTTCTGCCTTCCTTGAGGAGCGCAAGGACTAAGGACCACCCAAGTTGCT
CCGCATGTGAAAGTTATTGAAGATGTATGAGGTGCTCACATTCCTTTGCCGCCCATCTA----GAGGCTGAAATTCAGAT
GTGTCATGGTGATCAAGCTAAACCCTTATTTTGGGTGGTCTTTGGGCGTTGTTTCCCCGCTGAACGATCTTTTAAGCTTC
AGCCATCTTTAGTAAGAGGTATGTTTCCCTATCTGTTTACATTTCTTCAGTTAGTTGGTATACTTTATTCATGGGTTTAA
TGATCCTTTTCTCTCAAATTGCAGGTGGTTGCTACTCTTGTG---TTATTATGCTAGCATTGCTTTATTCTCTTGCCCAT
AGCAAAGCTACATGCCAGCTGGAGAGATTGTGTGATCTTCCTTCGCCAGGTGCTCAACAAGTTGCCTGGTATGGTTATTG
TGGCTTTGCTAATTGTGCTTCTTCCTAATCAAGGTGCAAATCTAGCAATATTCTCTTCATGTACCGAGTCACATGCCAGC
TG-------------------GAAGTTTTGCGTGATCTTCCTTCTTCAGGGGTCAATAAAGTGTCTGATACGA-------
-------------------------------------------GTATGGTGGATTCGCTAGTTGGGGTTCTTTACTGAAG
AAGCATTAAGGTGCAAATCTTGCTTTGCGATCTGCTAACAGTTGAGGGTTGTCAATTGGTTTGGTGGTACACAGATTTTC
CATTCTTTGGACGCCCCTTTGGCCCCCTTGCAGC-----------------------
>chr4B_645
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----ATAATGATGTCAAAAGAAAAAAACTGGTTTGGCATAATGGGATTTGTAGGAAGGAAGAACGAGCCCAGCAAG---G
TAGAGTCCGGTCCGACCGCGAAGGCCCGAACCGACCCACAGCCGAAACAATCCCCGTCGCGCCCGCGTGGGTCGTGACTC
GTGCGC----------------------CCTCACCACCACGCGTTCTCCCTACGCGTCCCCCCC--TACTATTTTAT---
--CGCGCCCGCCTCCCGCAAAAATATCTCCCAAATTCCCCAACGCCCCACGACTTGGCAACCCTAATCAGC-TCCCCCAC
CAATTCTCGATTCCCCGTCGCCGAGCTCCCCCGTCCCAACCCTAGCGCCAGATCCGCCCGCTCGCCCGCGCAGCCATGGC
GGAGTCCCTCGACATGTCCCTCGACGACATCATCAAGAGCAACAAGAAGGGCAACTCCTCGTCCGGCGGGGGTGGCCGCC
GCCGCGAGGGCCGCCGCGGATCTGCCGCTGCCGGCAGCGGCGCGGCAGCGGCCGCCGCCGGAGGCGTCGGCCCCAACAGG
CGCGCCTTCAAGAGGTCGGGGAACAGGGCGGCGCCCTACCAGCCGCCGAAGGTACGAACGAATCGCACGGGCTAGGCTTC
GCGCCGTCGGCGGAGGATGGTCTTCCGTTTTCGCCGAGGCGGGGGAGGATGATCTGGTGGTTTTCTCACTCTGGTGTGAC
GCGATCCAGGCCCCGGAATCGGCGTGGCAGCACGACATGTACTCGGACGCCTCTGCCAGAGGCGGCGGCGGCGGGAGGGT
CTCGGCTATCGAGACCGGCACCAAGCTCCTCATCACCAATTTGGACTTCGGCGTCTCAACCGAGGACCTCAAGGTATATA
CGTCGCCGGATCTACATGTCCAGTTGTTGCTCTCATGTAACTTGGTTGCTTCTTA----GTAGTTGGTCTCAAAGAATCT
CATAGTTTCCCTGGACGTTGTATTAGTCAAGCTATTTTATAGATCTGGCACAGGCTCAGTACCACAGCTGTGATTTGGTC
GTGCTAGTAGCCTCGCGTTGTTGAATT-------------------------TTCTTAGCTTGTTTCTGTGAATAGGACT
TTAGTTCTCAATTGTAATTAATCGTTAATGGTTGTTTGGAAGGGTGTGACCTCTTGACTGGCGTGGTTATGTTTTCGATT
GCTCTACGGTAGTCTCAGTTTGGTTCGTTTAATTGATGATGCTTTTGCATATCTTATTGCTTACTTCATAAGTTGAC---
---GCTCACTTGGAAT----CATTTTCTTGTTATAAACTTAGTCTCTCAGTTTGTATAGTTTACTTAAATGTTGATATGC
T-CTCCATAAAATGCTTTTTGCAGTTTCTTGTTCATAAGGTACTGTTCCTGAGTTATTTTTTCTT-TGAATGGTTCAGGA
GCTTTTCTCCGAGCTGGGTGATGTGAAGCGATGCTTGATTCACTACGACCGAAGTGGGAGGTCTAAGGTACTGATCTAGT
CTTATGTTTTTCTTTGTTCCATCTTCCATGTGTGTGTTCTGTGTGATGCCCAACAGTACTTACGTTCTGCAGGGAACAGC
TGAGGTTATATTTGCAAGGCGTGGTGATGCTGTTGCAGCGCTGAGGAAATACAACAATGTCCAACTTGATGGCAAGCCTA
TGAAAATAGAGATACTTGGGACCAACACTCCTACTGCTCCAGCTGCACTACCAACCAATAATGGAACCTATGCTAGGAAT
GTTGCTAAGAGGTATGTTAGATTTGGCGCATTACATATTTGTGGATTCAATTTATTGCCAGTAAAGTATCTGAATTTGCC
TGTTTGCCAGAATTGGTCATAAAGTCTTGTGTGATATTAAATGTTGTGGATGGTGAATTGGTGATAATACGACT------
-------GCAGAGGTGTTCCATTATATATTGCCCAATATTTCATTTGACATTATATAACA-GTAGGTGCTCGACGTGTTG
CAATGG-CATCACATTTAGTTTGTTCTTAGTTTGTAGGGGTATTAGCAGAAATGAATTATGAATTTCAGTTTCAAGAATT
CATCTTTGTCTACATAGTTAGCTGGTTAGGTTATCTAGCATATTAATCATGTTCCACCATTTTCCTGCTTTATTGAATGT
TTATAGGTGCACCTTTTGTTGCTTTGTCTGTTAGTAATAGATTTTCCCGCCTTAACGTACACCACTTCATTTGTTACAGT
GCACCAAGGGGTGTCTCAGCTAGTTTGCCACAGAACAGATCCCGTGCAAGGGGTGGGAGGGGTCGTCGTGGTGGTGGCGG
AGGCAGTGGATCTGGCGGTCGTCGTGGGAAAGAGCGTAGTCAGCCAAGGTCTGCTGAAGAACTTGATGCTGAGTTGGAGA
AGTACCATGCACAGGGTACGACGCCGATGCAGACCGCCGAATAAATCAACATCTTTGCAGCGTTGATATTTCAACATGAA
ATTTGAA-GGGCGCCCCTTTGTTCCCGCTTTTTGTGCTACTATATGTTCAAGGGACAACAAAACCTTTTACTTGTCAGGT
TCTTGGCTTACTGAATTGTATGGGTTATGTGTCCTACATAGAACTAGAGTTGAGTGGAT--------ACCGGTGAACACT
ACTGTTATGAACATTACTTGATTGCCTTTAGTTTCTGCCTTCCTTGAGGAGCGCAAGGACTAAGGACCACCCAAGTTGCT
CTGCATGTGAAAGTTATTGAAGATGTATGAGGTGA--ACATTCCTGTGCCGCCGATCTATCATGAGGCTGAAATTCAGAT
GTGCCATGGTGATCAAGCTAAACCCTTATTTCGGGTGGTCTTTGGGCGCTGTTTCCCTGCTGAACGATCTTTTAAGCTTC
AGCCATCTTTAGTAAGAGGTATGTTTCCCTATCTGCTTACATTTCTTCAGTTAGTTGGT-TAATTTATTCATGGGTTTAA
TGATCCTTTTCTCTCAAATTGCAGGTGGTTGCTACTCTTATG---TTATTATGCTAGCATTGCTTTATTCTCTTGCCCAT
AGCAAAGCCACATGCCAGCTGGAGAGATTGTGTGATCTTCCTTCGCCAGGTGCTCAACAAGTTGCCTGGTATGGTTATTG
TGGCTTTGCTAATTATGCTTCTTCCAAATCAAGGTGCAAATCTAGCAATATTCTCTTCACGTACCGAGTCACATCCCAGC
TGGAGGGATACTGTTCTTTTAGAAGTTTTGCGTGATCTTCCTTCTTCAGGGGTCAATTACTGAAGAAGCATTAAGGTGCA
AATCTTGCTTTGCAATCTGCTAACAGTTAAGGGTTGTCAATTGGTTTGGTGGATTCGCTAGTTGGGCTTC-TTACTGAAG
AAGCATTAAGGTGCAAATCTTGCTTTGCAATCTGCTAACAGTTAAGGGTTGTCAATTGGTTTGGTGGTACACAGATTTTC
CATTCTTTGGACGCCCCTTTGGCCCCCTTGCAGCTGCTGACTTCATTTATGATGGTT
>chr6D_1809
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----------------------------------------TTTTTTGCATATTGTATTTCTTGCTTCATAAGTTGACAAA
GCTGCTCTATACATTTTGTCCTTTTTCTTGTTATG------GGTGATCCTTTTGTATAGTTTATCTGAACAATGGTATGC
TTCTCTATAAGATGCTCTT-GCAGTTTCCTGTCAACAGGATACTCTTGTTGAGTTATTTTTGTGTGTGAACAGTTCAGGA
GCTTTTCCCTGAACTGAGTGATCTAGAGGGATGCTCAATTCGCTATGGACGAAGTGGGAGGTCTAAGGTATAGATGCAAT
CTCATGTTTTTCTTTGTTCCAT-------GTGTGTGTTCTATGTTATACATGGCAGTATTTCTGTATTGCAGGCAACAAC
TGAAGTTATATTTGCAAGGCGTGGTGATGTTGTTGCTGTGACGAGGAACGGTGT----------------------CCTA
TGAAAATGCAGATACTTGGGACTAACACTCTTGATCG---AGCTACACTACCAACCGATAATGGAAGGTATGCTAGGAAT
GCTGCCAAGAGGTATGTTATGTTAGGTGCATTACTTAT------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S------S------S------------------
----------S------SSSSSSSS-------S----S-------S----------S-------SS-S-SSS-SSS----
-------S---------S------------S---SSS-------------------------------------------
-------------SS--------------------S----------------------S---------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
----------------------------------------S--S-S-------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------S----------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-------------S------------S-S---------------------------------S---------------
---------------------------SSSSSSSSSSSSSSSSSSSSSSSS---------------------S-------
-------------S--S-----S---------------------------------------------------------
-------S----------------SS----------------------------------S-------------------
-S-------S---------------S--------------------------------S---------------------
---------S---------------------------S--S-S-------------------------------------
-------------------------------------------------------------------------------S
-----------------------------------------------------S-S-------------S----------
--------------------------------------------------------------------------------
-------------------------------------------S--------S---------------------------
--------------------------------S----------------S------------------------------
-------S-------S-------------------S--------------------------------------------
-------S-------------------------------------------------------S----S-----------
------S--------------------------------------------S----------------S-----S-----
-------S--------------------------------------S-------S-------------------------
----------------------------------S-S-------------------------------------------
-----------------------------------------------------------------S-----S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
-------S------------------------------------------------------------------------
-----------------------------------------------------S-----SSSSSSSS-------------
--------------------------------------------------S-----------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
-S---S------------------------------------SSS-----------------------------------
------S----------S-------SS-----------------S---------S--------S----------------
------------------------S---S---------------------------------------------------
-------S------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
----------------------------------S----------------S----------------S---------S-
-----S---------------------------------------------------
>forward_144
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--------------------------------------------ATAGGCCCTGTTTGGTTCGG----------------
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>reverse_1665
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----------------------------------------------------------------TAACTGTGATTTGGTC
GTGCT---------------------------------------------------------------------------
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>forward_249
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---------------------------------------------------------------------TGGCAACCCAG
CTGATACAG-----------------------------------------------------------------------
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>reverse_1783
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----------------------TGTTAATGGTTGTTTGGAAGGGTG----------------------------------
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---------------------------------------------------------
>forward_315
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GTCCTGAGCTGCTTCCACTT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2364
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CGCACTACCGACCAATAATGG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_395
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTAGATTCTGCTGCGTGGCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2373
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GACCAATAATGGAAGCTATGCTAGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_926
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTCCCAAATTCCCCGACACA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2629
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTCGCCGTGTTG
CAATGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_1275
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GAACGAATCGCACGGGCTAT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_3263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGTCAACCGGTGAACACT
ACT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
