>input_sequence_39814
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----------------------------------------CTATATATCCCATCTCTTACTTTTTATCTGCAGTTTTGTT
TTTCAGTTTGGAAACTGTACTAGCTCCAACCACACTTCTCTACAGGTTTTCCTTTCACGGTATCACAATTGACTTTCTAG
CTATCAGTAGCAAACAGCATAGAAGCAGCAGGCAGGTAGCCCCAATCCTACTATCCACTGGGCTTAGCTCGGATGCAGAT
CTCTCTGGTACTCGTAGCGCGACCTGCTGGCTGATTCGGTGGTTGAGGCCATGGCTCCGATTGAGCAGTTCTTTAGTTGA
AGAAAGCAGCCGAGGAGTCCAAGTCCAACGCTGATTTCTCTGCTGAGATAACATATCTGTGCGGTACTCCCAGCCGTACT
AAGCCTCCAGTAAGTTGATTCAACGGTGGAGACCATGGATTCTGCAGAAGTAGTACCTTCTCCCGTTGAGGAGTACTTGA
CGAAAGCAGCTCAAGAGTTTCAGGCTGGTTTGTCCAATGAGATCACAGATGTGCGTGATCTTCCTAGCTGTAGCCATGAG
CAAGTTGA----TGAGGA---CATGGACTTTGCAAA---AGCAGCACCGG---CTACCCCCGTTGAGGAGTACTTGAGGA
AAGCAGCACAAGAGT--TTAGGGTTGATTTCGACAAAAGAAAAGAGAAAATGCATAGGTTCT-----------CTGCAAG
CCTGCACGGTC-------TCGGAAGCTGCTACACCGTGCCAAGGGTTGTGGCCATCGGCCCTTACCACCATG-CTCACCC
CAGCTCCGTCAGATGGAGAAGGTGAAGCACGTGGCTGCCTACCACTTCATCAGCAGGTCAGACCACTCACTTGAGGAGAT
TTATGGGGCTGTT-GTCTTGGTCACGCACGAGGCCCGCCGCCTCTACAATGATGAC-----GCTGTGGCACGTATCAGCG
ATGCTGACTTTGAGGCTATGATGTTCTATGATGCATGTTTCTTGCTGGAGTTTGT---GCTTAT---------GTTTAAC
AAGGAGCAACTTCCATGTC---CAGAGTTGCTATCGGTTTTTCGCTCCAATAGATTGCATATCAATAGTGATGTAATGAT
GCTAGAGAACTAACTCCCCTGGCTGGTTGTGGAAACCGTCATGAACTTTAGGCCTGTGGCCGTGCAAGTG------AAGA
AGTTAATTTCAGCGATGGGAGGTGGTCTCACAAACCGTTTGTA------CCATAATGGACCAGACGAAATCCTTTCAGAA
TTGGATGAAGAGTATGC---GCCTCCTCATCTCCTTGGTCTCCTCAGATTCTACAAAACAACCAACAATACGAGTATAGG
ACTATCAAAGTCAGCAAGAAGGCCAAAATAGTCAGCAAGATAACCCGCATTAATCATGTATTTTCGACATTCATACGTTT
GACTGCTCAAACGTTTG---------------------------------------------------------------
------CTATAGAAAGACATATGCCAACGGCCAAGAAGAAGCCTAGTAAAAGAGTCAGTTCAATGTCAGCATCTACAAGT
GCCATCGAGCTTGCAGAAATCGGCATCAAGCTGAAAGCCATCAAGACAGGAAGTTTCACAGAAATCGGAATCAGGAAAGG
ACCCCTCTTTGGCGAGCTTTACCTGACTCCACTGGTGCTAAGCAGCACAAGGGCATGTTGGCTTGTAAACATGGCGGCTT
TTGAGGTATGCACGACCTCAGGGGATCTATATAA------------TGATGAAGAGACGTCCGTCTGCTCGTACTTCGCC
CTCCTTTCGATGCTCATGGACCGGGAGGATGATGTTCACGAGCTACGAAGGAAGCATCTTGTGCTAGGAGAACTCACAAA
CAAAGAGATGCTTGAGTTTTTCAAGAGCCTTACCAAGCTCCTGTCCATCGGCCCCTCCTACTTCCGTATCTTGACACGCA
TTGAGAACTACAAAGTCAACAGGTGGATGTGGATCAAGGTGCACAAGTTCATCTACAACAACTTTAAAATCATTGTCACG
GTCTTCACCGTGGTTGGTGTTCCAGTGGGCATCTTCAAGACGCTCCTCTCTCTCAAGCAACAATAGTAAAGGTAGACCA-
----TG-----TTTA----CCATACTTA---CATACAA------------------------------------------
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>chr3D_1_TraesCS3D01G512000
CTCCTCTCTCCCTTCCTCCTCCCAATCTCCTCTTTCTGCTCATTACGATCCCCCACCACCGCGCCATTGAGCGCCTCGTG
AAGAGCTTTTTGTCCATGGTGAGGGGAGGGCGTGATGTTGAAGGGCGACTACAGGCGTGCGCCGTGAGCAAATGGCGGGG
GTGGTGCTGCATAGGCACCGGACGACGGCGCTTGGTGAGCATGAGAGACGCCATGGCTGACGACTGCAAGTGATGCGGCT
GCCGACGATGATGGGCGCGATGGTGCTACAGCCGCAGTTCGGCGGTGCCGCAACTGTGGCCGGGGAAAGCTAGAACCACG
GTCTGGCGAGCTACGAGGCGCCTACATGCTGGCAAGGGGGGATGCTACAACTGGCGAGATGGTGCTAGCGGTGATCGCGT
GATTTTTTGCTGCAATCTTTGCGTTTTCCTGGACTAGCACCGCTTAGTTGACGTAAATGTAATGAAATCCGTCATGTTTA
TATGAAATCCGGCCGTGTTTGCACGAATTTCGTCCGGTTGGTTTGAACTGTTGTCAAAATATATGCTGCTACCGTTGGAT
GGTGTTCTTTCGCATCCCTGTCCGCGGACAGATGCGAGAGGAAATTTACGGGTCGACATTGAAGATGCCCTAATACTACA
GGTGATGTCCCTCAAAAGAAAAACACTACAGGTGATGGATTAGCATCCTGGCTAAAACAATTTATATCTTTTCCGCAGAC
CAATGATACAAGTCTCAAGTGGCACAAAGCAACATAATATCTTCTGATAAACAAAACAAAAAAAATGATAGTTGGCACGG
GTGAGCTCACCATGTTGACGCGGACTGGCCAAAGAGTGGTTGATCGGATTCAGAGAATTAATATAAACTGTCTCGTAGTG
GAAAAGGCAATCCCATTTGCAGTAGTTTAGTGTCTTTTGGCTCAAACGTCCATGTCTTAGGAAGCTTCAAAAAATATATA
TACACAAAAGGGATAGTGGAGGTGCCATCTTGGTATATAACTATATATCCCATCTCTTACTTTTTATCTGCAGTTTTGTT
TTTCAGTTTGGAAACTGTACTAGCTCCAACCACACTTCTCTACAGGTTTTCCTTTCACGGTATCACAATTGACTTTCTAG
CTATCAGTAGCAAACAGCATAGAAGCAGCAGGCAGGTAGCCCCAATCCTACTATCCACTGGGCTTAGCTCGGATGCAGAT
CTCTCTGGTACTCGTAGCGCGACCTGCTGGCTGATTCGGTGGTTGAGGCCATGGCTCCGATTGAGCAGTTCTTTAGTTGA
AGAAAGCAGCCGAGGAGTCCAAGTCCAACGCTGATTTCTCTGCTGAGATAACATATCTGTGCGGTACTCCCAGCCGTACT
AAGCCTCCAGTAAGTTGATTCAACGGTGGAGACCATGGATTCTGCAGAAGTAGTACCTTCTCCCGTTGAGGAGTACTTGA
CGAAAGCAGCTCAAGAGTTTCAGGCTGGTTTGTCCAATGAGATCACAGATGTGCGTGATCTTCCTAGCTGTAGCCATGAG
CAAGTTGA----TGAGGA---CATGGACTTTGCAAA---AGCAGCACCGG---CTACCCCCGTTGAGGAGTACTTGAGGA
AAGCAGCACAAGAGT--TTAGGGTTGATTTCGACAAAAGAAAAGAGAAAATGCATAGGTTCT-----------CTGCAAG
CCTGCACGGTC-------TCGGAAGCTGCTACACCGTGCCAAGGGTTGTGGCCATCGGCCCTTACCACCATG-CTCACCC
CAGCTCCGTCAGATGGAGAAGGTGAAGCACGTGGCTGCCTACCACTTCATCAGCAGGTCAGACCACTCACTTGAGGAGAT
TTATGGGGCTGTT-GTCTTGGTCACGCACGAGGCCCGCCGCCTCTACAATGATGAC-----GCTGTGGCACGTATCAGCG
ATGCTGACTTTGAGGCTATGATGTTCTATGATGCATGTTTCTTGCTGGAGTTTGT---GCTTAT---------GTTTAAC
AAGGAGCAACTTCCATGTC---CAGAGTTGCTATCGGTTTTTCGCTCCAATAGATTGCATATCAATAGTGATGTAATGAT
GCTAGAGAACTAACTCCCCTGGCTGGTTGTGGAAACCGTCATGAACTTTAGGCCTGTGGCCGTGCAAGTG------AAGA
AGTTAATTTCAGCGATGGGAGGTGGTCTCACAAACCGTTTGTA------CCATAATGGACCAGACGAAATCCTTTCAGAA
TTGGATGAAGAGTATGC---GCCTCCTCATCTCCTTGGTCTCCTCAGATTCTACAAAACAACCAACAATACGAGTATAGG
ACTATCAAAGTCAGCAAGAAGGCCAAAATAGTCAGCAAGATAACCCGCATTAATCATGTATTTTCGACATTCATACGTTT
GACTGCTCAAACGTTTG---------------------------------------------------------------
------CTATAGAAAGACATATGCCAACGGCCAAGAAGAAGCCTAGTAAAAGAGTCAGTTCAATGTCAGCATCTACAAGT
GCCATCGAGCTTGCAGAAATCGGCATCAAGCTGAAAGCCATCAAGACAGGAAGTTTCACAGAAATCGGAATCAGGAAAGG
ACCCCTCTTTGGCGAGCTTTACCTGACTCCACTGGTGCTAAGCAGCACAAGGGCATGTTGGCTTGTAAACATGGCGGCTT
TTGAGGTATGCACGACCTCAGGGGATCTATATAA------------TGATGAAGAGACGTCCGTCTGCTCGTACTTCGCC
CTCCTTTCGATGCTCATGGACCGGGAGGATGATGTTCACGAGCTACGAAGGAAGCATCTTGTGCTAGGAGAACTCACAAA
CAAAGAGATGCTTGAGTTTTTCAAGAGCCTTACCAAGCTCCTGTCCATCGGCCCCTCCTACTTCCGTATCTTGACACGCA
TTGAGAACTACAAAGTCAACAGGTGGATGTGGATCAAGGTGCACAAGTTCATCTACAACAACTTTAAAATCATTGTCACG
GTCTTCACCGTGGTTGGTGTTCCAGTGGGCATCTTCAAGACGCTCCTCTCTCTCAAGCAACAATAGTAAAGGTAGACCA-
----TG-----TTTA----CCATACTTA---CATACAAATAAAATACTCCGCTGTGCTTAATTATGACGGTGTGATGTTA
GTTGTCATGTTT---------------------------GTATGGACTGCATTGGACAAATCGTTGGGTCCATTAATTTA
ATTTACGGATTGCTTGTATGATTAATTTACTGTATCTCAAATTTTGAGTTCATTTGTTAC----TTGTGAGATATGGTTT
GAATACAAGGCTCGCATCTGCGCTCAAATAGAGACGGTCTCAATTTGGGAAGAAAGTTCCGGAAGAACCACTAGATCTGG
TGATTCGGTCCATGCCGATTTTGCACCTGTTGTGCGCTATTATGTGCAATCAGTTGGTTAGGAGAGTCCTGTTTAATCCT
AGTAAGATGTGACTTGCGCAATTCTAATATTGCTGCCAACTAATTGATATATCAAAACTTAGGAAAAAGCTAAACAATTT
AGGTGAAAAGAAACGGCAATGCCAAATGGATCTAAAAAAAGGATTATG----TTGGAGGCTTGAACAAGTAAGCTGAAGT
CATGTCTGTACACAAAGCACCATGCTTCTATTTGTTATAGTTGTAAATGTAATGGCAAATGATCAAGGTTTTAAAACCAA
ACAAATCAAATTTCCATCATTTTCAATACATTATGGTTTATGATTGCACTTGCTAGTACAGCCACATGGTGAACTGGTGA
TGTAGTTGCTTTTTAGGCTCAAGCCTACATATGCGGTCCACACTTTTTTCCATGTCATAGGAATATAAATTAGACCATTG
TTCTAATTATCAAACACTTTGAGTGAAAACAAACAGATGACAGTTGTATTCTGTTATTAAAAGTGTTTGTTGTCTATGTC
AAAATGTCCATTGCATAATTTTTAGAATGTACATTTGTATTTAAAAAAATTCATGTATTAAAAATACATTAAACATGTAT
CTAAGAAAAATGTTAATCATGTACAAACAAAAATTCTCGTCATGTTTTTGAAAGAGTTTCATTGCGCCTTTAGAAAAATC
CATTGTGTACAAATAAAAGGTACATCATGTTTT
>chr6B_1359
CTAACCCA------------------------------------------------------------------------
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-----TCCAGCAAATTAGTTCGAGGATGGAAGCCGTGGAATCAGTAGAAGCAGTACCTGCTCCGGTTGAGGAATACCTGA
AGAAAACAGCTCAAGAGTTCAAGGCTGCTTCCCCCTCTGAGATTACAGATGTGCCGGTGGTTCCTAGTTGTAGCCGCCAG
CAAGTTGAATGATGAGCACATCGTGGTCTTTACAGATGCAGCAGTACCGG---CTTCGGTTGAGGAGCAGTACTTGAGGA
AAGTAGAGCAGGTGACCTCAAGGTTGATTTCCACAAGAGACAAGATAAGATGCATAGGTTCCCTGCGGGTTCCCTGCAAG
CCTACACGGTC-------TCGGCAGCCAGTACATTGTGCCAAGGGTCGTGGCCATCGGCCCTTACCACCATGACTCACCC
CACCTCCGGCAGATGGAGAAGGTGAAGCATGTGGCTGCCCACCACTTCATCAATGGGTCAGGCCACTCGCTTGAGGAGAT
CTATGGGGCTGTC-GTCAAGGTTGCGGACAAGGCCCACCGCCTCTACGCTGATGAC-----GCGGTGACAGGTATAAGTC
ATGCTGACTTTGAGGCTATGATGTTCTATGATGCTTGTTTCTTGCTTGAGTTTAT---GATTAT---------TATGGGC
GATGAGCAGCTTCTATGTC---CAGAGTTGCTATATGTTTTTCACTCCAACAAACTGCATATCTATAATGATGTAATGTT
GCTGGAGGACCAAGTTCCTTGGCTAGTTATGGAAACCATCCTAACCTTTGGGTTTGTGTCCGCGCAAGTG------AACA
AGACAATTTCAGTAATGGGAGAAGGTCTCACAAACA---TGTA------TCATACTATACCAGAACAAAACATTTCATAC
TTGGATGAGAAGTA---CAGGCCACCCCATCTCCTTGGTCTCGTCCGATTCAACAAAACAAGCAGCAGG--------ACA
ACCATCAAAGTCAACAAGAAGG---------------------CCTGCTTCAATCAAGTATTTTCAACATTGAATCGTTT
GAAAGCCCCCATCAGGGCAAAGCAAATGTTTTCTTCAACATTGAAACTCTTGAACGCGCGAACGGTTGCTAAGCCTAACC
CCGGCCCTATGAGAAGACATATACCATCAACCAAGAAAAAAA------------------CAATTTCATTATCTACAACT
GCCCTCGAGCTTGCAGAAATTGGCATCAAGCTGCAAGCCATCAAGACTGGAAGTTTCACAGAAATCGGCATCAACCAAGG
CCACCTCTTTGGCGAGCTTTTCATGACGCCCCTAGCGCTGAGCAACATAGGCGCATGTTGGCTTGTAAACATGGCGGCTT
TTGAGATATGCACGATCTCAGGGGATCTACGTCA------------TGATGAAGAGTTGGCTGTCTGCTCGTACCTCGCC
CTCCTTTTGATGCTCATGGATCGTGAGGAGGATGTGCACGAGCTACGAACGAAGCATCTTCTGCATGGAGTACTCACAAA
CAAAGAGATGCTCGAGTTCTTCAAAAGTGTTTCTAAGCACCTTCCTGCGGGCAGCTCGTACATCCGCTTCTTTTTGCGCA
TGGAGGACTACAAGGTCAAAAGGTGGATGTGGATCAAGATGCACAGGTTCATCTACAACAACTTCAAAACCATTGTCGCT
GTCTTCTCCGTGGCTGGTGTTCTAGTGGGCATCTTCAAGACGCTCTTCTCTCTCAAACAACACCAGTAAAGTCTGACAA-
----TGCATGTT-TA----CCATTCTTA---AATACAAATACTCTG-TTT--TGTGCTTAATTATGACGGCATGGTGTTA
GTTTTTCTGTTTTCCGAGTGATGCACGGTGTGATGCATTGTATGTAGTGCATTTGGCA----------------------
-----------GATTGTTTGTATAATGTACTGCATCAGAAATTCTGAGATACAACTTCACCTCATTGTGGGTTATGGTTT
GTAAACTCGGCTCGAATTTGTGTTGAGATATAGATGGTCTCAGTTCTGGAAGAACCTGACCTGCCGGATCGGTCCACCAC
AGT---------------TTTTGCACCTGCTCTGTGCTACTATGTGAAATCAGTTGTTTAGAGGAACCCTGTTTAATTAT
AGTAATGCATGA---GCGCAACTCTAATAATGTTCCAAACTAACTGTCATATCTAGAATTA-GGAAAAGATAAGCGACCT
AGGTG-AAAGAAACAGCAATGTCAGATGGACCTCGTCGGAAACTGGATTTTATTGGAGGGTTTAACAACTAAGTCGAAGT
CATATCTGTA----------------------------------------------------------------------
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>chr6A_1365
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----CTCCAGCAAGTTGATTCGCAGGCCAAGCCCATGGATTCTGCAGAAGCAGTACCTGCTCTGGTTGAGGAGTACTTGA
AGAAAGAAGCTCAAGAGTTTAAGGCTGCTTTCACCTCTGGGATCACTGATGTGCGTCATTTTCCTAGCTGTAGCCGCGAG
CAAGTTGA----TGAGAGCATCATGGACTTTGCAGA---AGCAGTACCGG---CTCCGGTTGAGACGGAGTACTTGAGGA
AAGCAGCACAAGAGA--TCAAGGTCAATTTCGACAAGAGACAAGAGAAGATGCATAGGTTCCCT-----------GCAAG
CCTACGCGGTC-------TCGGCAGCCAGTACATTGTGCCAAAGCTTGTGGCCATTGGCCCTTACCACCATGGCTCACCC
CGCCTAAGGCACATGGAGAAGGTGAAGCACGTGGCTGCTCACCACTTCGTCAACGATTCAGGACGCTCGCTTGAGGATAT
CTATGGGGATGTC-GTCAAGGTTGCTGACAAGGTCCGCTGCCTCTATGATGACGATGTGCTGTGCTGGCAAGTATAAGCC
CTGCTGATTTTGCGGCGATGATGTTCTATGATGCATGTTTCTTGGTGGAGTTTAT---GCTTAT---------TGTTCAC
AGGGATCAGCTTCCATGTC---CAGAGTTGCTATTCGTCTTACGCTCCAACGCACGACATATCAATAATGATGTAATGCT
AATAGAGAACCAGCTCCCCTGGCTGGTTGTGGAAACCCTCCTCAACTTTAGGTCCGTGTCCGTGCAAGTG------AAAC
AGTCAATTTCAAGGTTGGCAGAATCTCTCACAAACCGTCGTCTACA------------ACGAGAAAAGATCCTTTTAGGC
TTCGATGAAGAATG---CAATCCGCTTCATGTGCTTGGTCTCCTTCATTTCTACAAAACAAGCAGCAGG--------ACG
GCCATCAAGGTCAGCAAGAAGGC---------------------TTGCATCAACCATGTATTTTCAACATTGAATTGTTT
GAAAGCCC---------------------------------------------------GAATGATTGCTGAGCCTAACC
TCAGGCTTGTAGAAAGAGATATACCAGCACCCAAGAAAGAAA------------------TAATGTCAACATCTATAAGT
GCCATCGAGCTTGCAGAAATTGGCATCAAGTTAAAAGCAAGCAAGACAGGATGTTTCAACGAAATCGGCATCAAGAAAGG
ACCCCTCTTTGGCGAGCTTTTCCTTACGCCACTAGCACTAACCAGCACAAGGGCATGTTACCTTGTAAACATGGCGGCCT
TCGAGCTATGCACGACCTCAGGGGATGCAGAACA------------TCATGAAGGGTTGGCCGTCTGCTCATACATCGCC
CTCCTTTCGATGCTCATGAACCGGGAGGAGGATGTGCACGAGCTACGAAGGAAGCATATTGTGCAAGT-CAACTCACAAA
CAAAGAGATGCTACAGTTCTTCAAGAGCCTTACCAAGCACCTGAACGGTGGCCGCTCCTACACCCACATCTTGACAACCA
TTGAGAATTACAAGGTCAATAGGTGGATGTGGATCAAGGTGCACAAGTTCATCTACAACAACTTTAGAACCATTATCACG
GTATTCTCCGTGGTCGGTGTTCTAGTGGGTATCTTCAAGGCGCTCCTCTCTTTTAAGCAACACCAGTAAAGATCGACCA-
----TG-----T-TA----CCATACTTG---TATACAAATACTCTG-TTT--CGTGCTTAATTACGGCGGTGTGATGTTA
GTTTTCGTTTTT--------------------------------------------------------------------
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>chr6B_1391
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------------------------------GACCATGAATTCTGCAGAAGCAGTGCCTGCTCCGGATGAGAAATACTTGA
AGCAAGCAGCTCAAGAGTTCAAGGCAGCTTTCTCCACAGAGATCACAGATGTACATGACATTCCTAGCTGCAGCCACGAG
CAAGTTGA----TGAGGGCT---TGAGCTTTGCTGA---AGCAGTACTGTCTCCTGCTCCGGCTGAGGAGTACTTGAATA
AAGCAGCGATGGAAT--TTAAGGTTGATTTTGACAAAAGAAAAGAGAAGATGCATAGGTTTCCT-----------CCAAG
CCTACGCGGTC-------TTGGTTGCCAGTACATCGTGCCGAGGGTCGTGGCCATCGGCCCTTACCAGTGCGGCTCACCA
CACCTTCGGCAGATGGAGAAGGTGAAGCACGTGGCTGCCTACCATTTCATCATAAGATCGGGCCACTCAATTGAGGAGGT
CTTTGGGGCTGTC-GTCAAGGTTGCAGACCAGGCTCGCCGCCTGTACACGGATGAC-----GCGGTGGCAGGTATCAGCC
ATGCTGACTTTGAAGCTATGATGTTCTAGGATGCATGTTTCTTGCTGGAGTTTAT---GCTTAT---------TGTTAAC
AGGGAGCAGCTGCCATGTC---AAGAGTTGCAACGCATTTTTCTCTCGAGTGCGAAGCATATATATAATGATGTAATGCT
GCTGGAGAACCAACTCCCCTGGCTGGTTGTGGACACCCTCATGAACTTTAGAT------CCGTGCCAGTG------AAGC
AGAAAATTTCAAATATGGGAGATGGTCTCACAAACCATGTGCA------TCAAACCAGACCAGAAGAAATCCTTTCAAAC
ATGAATGAAGACATG-----TCCGCCTCATCTCCTTGGTCTCCTCCGATTCTACAAAACAAGCAGCAAG--------ACC
ACCACCAAAGTCGGCAAAAAGGCCCA---------------------CATTAATCAAGTATTTTCAACATTGAATCGTGT
GAAATCTG---------------------------------------------------GATCGATTGTTGAGCCTAACA
TCGACAATATGGAAAGAAATATACCGTCCGACAAGAAGAAGCCCGAGGAAACACATGGTTCAATGTCAACATCTACAAGT
GCCATCGAGCTTGCAGAAATTGGCATTAAGCTGAAAGCCAGCAAGTCAGGAAGTTTCACAGAAATCGGCATCAGGAAAGG
ACCCCTCTTTGGCGAGCTTTTCTTGACGCCACTGGTACTAAGCAGTACAAGGACATGCTGGCTTGTAAACATGGCGGCTT
TCGAGCTATGCACAACCTCAGGGGATCTTG------------ATTGTGAAGAAGAGACGGCTGTCTGCTCATACCTCGCT
CTCCTTTCTATGCTCATGGACCGGGAGGAGGATGTACACGAGCTACGGACGAAGCATCTTGTGCAAGGACAACTCACAAA
CAAAGAGATTCTCCGGTTCTTCAAGAGCCTTACAAAGCACCTGTCCGTTAGCAGCTCCTACCTTCGCATCCTGAGACGCA
TTCAGAAATACAAGGTCAACCGGTGGATGTGGATCAAGGTGCACAAGTTCATCTACAACAATTTCAAAACCATTGTCACG
GTCTTCACCGTGGTTGGTGTTCTAGTGGGCATCTTCAAAACGCTACTCTCTCTCAAGCAACACCAGTAAAGTCCTACCA-
----TG-----CTTGTTTACCCTTCTTTAAGTACAAAAATACTCTGCTTT--CCTGCTTAGTTACGACGGTCTGGTGTTA
GTTTTTCTGTTT--------------------------------------------------------------------
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>chr6A_1573
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-----------------------------------------------------------------AGGAGTACTTGAGGA
AAGCGGCAGAGGAGT--TCAAGATTGATTTCGACAAGAGAGAAGAGATGATGCATAGATTCCCT-----------GCAAG
CCTACGCGTCGACAGGCGTCGACAGCCAGTACATCGTCCCGAGGGTCGTGGCCATCGGCCCTTACCACCACGGCGCACCC
CACCTCCGGCATATGGAAAAGGTAAAGCACGTTGCTGCCTACCACTTCATCAGCAATTCAGGCCACTCACTTGAGGAGAT
TTATGGGTCTGTCTGTCTTGGTCACGCACGAGGCCCGCCCCCTCTATGCTCACGAC-----GCGGTGACACGTATCAGCG
ATGCTGACTTTGCGGCTATGATGTTCTATGATGCATGTTTCTTGCTAGAGTTTATTATGCTTAT---------TGCTCAC
AGGGATCAGCTCCCATATC---CAGAGTTGGTATGTGTTTTTCACTCCAACATACAAGATATCTGTAACGATGTAATGCT
GCTAGAGAACCAGCTCCCCTGGCTGGTTGTGGACACCCTACTCAACTTTAGGTCCGCATCGGTGTCCGTGTTAGTGAAGA
GGACAGTTTCAAGGGTAGGATATTCTCTCACAAACAGTGGGTA------TCATACCGGACCAGAAGAAATCCTTTCAGAA
TTGGATGAAGAGTACTGCAGGCCGCCTCATCTCCTTGAACTCCTCCGATTCTACAAAACAAGCAGTAAC--------ACG
GCCATCAAAGTCAGCAAGAAGACCAAAATAGCCAGCAAGATAGCTCGCATTAATCAGGCATTTTCAATGTTGTGTCGTTC
GAAAGCCT---------------------------------------------------GAACGACTTCTGAGCCTAGCC
TTGGACATATAGAAACACATATACCGTCAGCCAAGAAAAAAA------------------CAACGTCAACATCTACAAGT
GCCATTGAGCTTGCAGAAATTGGCATCAAGCTGAAAGCCATCAAGACAGGAAGGTTCTCAGAAATCGGCATCAGGAAAGG
ACCCCTTTTTGGTGAGCTTTTTCTGACGCCACTGGTGCTAAGCAGTACAAGTGCATGTTGCCTTGTAAACATGGCGGCCT
TCGAGGTATGCATGACCTCAGGGGATCAACATGA------------TGTTGAAGACATGTCCGTCTGCTCGTACATCGCC
CTCCTTTCGATGCTCATGGACCGGGAGGAGGATGTGCACGAGCTACGAGCGAAGCATATTGTGCAAGGAGAACTCACAAA
CAAGGAGATGCTCGAGTTCTTCAAGAGCCTTACCAAGCACTTGTCTGTCGGCGACTCCTATGTCCGCATCTTGACACACA
TTGAGAACTATAAAGCCAAGAGGTGGGTGTGGATCAAGGTGCACAAGTTCGTCTACAACAACTTCAAAGCCATTGCCACT
GTCTTGACCGTGGTTGGTGTTCTAGTGGGAATCTTCAAGACTCTCCTCTCTCTCAAGCAACAACAATAAAGGTAGACCA-
----TG-----TTTA----CCATACTTC---CATACACATACTCTG-TTT--TGTGCTTAATTATTAAGGTGTGATGTTA
G-------------------------------------------------------------------------------
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>chr6D_1581
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-------------------------------------------------------------------------TTGATGA
AAGCAGCAGAAGAGT--TCAAGATTGATTTCCACAAGAGAAAAGAGCAGATGCATAGGTTTCCT-----------GCAAG
CCTACGCAGTC-------TCGACAGCCAGTACACTGAGCCGAGGGTCGTTGCCATCGGCCCTTACCACCACGGCAAACCC
CACCTCCTGGAGGTGGAGAAGGTCAAGCACGTGGCTGCCGCCCAATTCACCCACGAGTCAGGCCGCTCAATTGAGGAGAT
CTATGGGGCTGTCTGCG-AGGTTGCAGACGAGGCCCGCCGCCTCTACGGTCATGACT--CTGCGGTGGCAGGTATCAGCA
ATGTCGACTTTAATCCTATGATGTTCTATGATGCTTGTTTCGTGCTGGAATTTTT---GCATACAATTAGTGATGAGCAT
GAGGAGCAGCTTCTATCTGAAGAAGCATTGCTGTATTTTTTCCGCTCCAACGAAGAGCAAATCATTTGTGATATAATGTT
GCTAGAGAACCAGCTCCCCTGGGTAGTTGTGGAAGCCTTGATGAACTTCAGGT------CCGTTCCCGTGCAAGTGAAGA
TGATAATTTCAAGGATGGGGAAAGGTCTCACAAACCGTAAGTATCATATTCATACCGGACCAGAAGAAACTATTTCAGAC
TTGCATGAAGAGTA---CAATCCGCCTCATCTCCTTGGTCTCCTCCGATTCTACAAAATAAGCAGCAAG--------ATT
TCCACCAAAGTCAGCAAGAATGTCAAAATAGCCAACAAGATATCCTGCATTATTCATGTATTTTCAATATTGAACCGTTT
GAAAGTCTGGTTAATTGGTGC-----------------------------------------------------------
----GCATAAAGAAATGCGTATACCATCGGCCAAGAACAAGTCCATGAAAACACTCGGCTCAATGTCAATATCTACAGGT
GCCATCGAGCTTGCAGAAATTGGCATCAAGCTGAAAGCCAGCAAGTCAGGAAGTTTCACAGAAATGGCCATCAGGAAAGG
ACCCCTCTTTGGCGAGCTTTCCCTGACGCCACTGGTGCTAAGCGCTACAAATGCATGTTTACTTGCAAACATGGCAGCTT
TCGAGGTATGCACGACCTCAGGGGATCTATCGGA------------TGATAAAGGGACGGCCGTCTGCTCTTACCTCGCC
CTTGTTTCAATGCTCATGGATCAGAAAGAGGATGTGCGTGACCTACGGAGGAAGCATCTTGTGCAGGGAGAACTCACAAA
CCAAGAGGTGTTTGACTTTTTCAAGACCCTTACCAGGCACCTGCCGGTCGGCCACTCCTTTCTCCTCGTCTTAACAAGCA
TTGAGAAGTACCAGGTCAACAGGTGGATGTGGATCAAGGTGCACAGGTTCATCTACAAGTACTTCAAAACCATTGCTACG
GTCTTCTCAGTGGTTGGTGTTCTAGTGGGCATCTTCAAGACGCTCCTCTCTCTCAGGAAACACCAGTAAAATCAGACCA-
----TG-----TTTG----CCATA--------------------------------------------------------
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>chr6A_2372
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------------------------------CCAAAAAGAAGTCCAGGAAAAAACTCAATTCAGTGTCGACATCTACAAAT
GTCATCGAGCTTGCAGAAATTGGCATCAAGCTCAAAGCCATCAGGACAGGAATTTTCACAGAAATTGGCATCAGGAAAGG
ACCCCTGTTTGGCGAGCTTTTCCTGACGCCACTGATGTTAAGCAGTGCAAGGGCGAGTTGGCTTGTAAATATGGCTGCTC
TTGAGGTATGCACGAGCTCAGGGGGTCAACGTCGTTATCAACATTGTGATGAAGAGATGGCCATCTGCTCGTACATTGCC
CTGCTTTCGATGCTCATGGACCGGGAGGAGGATGTGCACGAGCTACGAAGGAAGCATATTGTGCAAGGAGAACTCACAAA
CAAAGAGGTGCTCCAGCTCTTCAAGAGCCTTACGAAGCACCTGACGTCCAGCCGCTCATACCGCCGCATCTTGAGAGACA
TTGAGAGCTACAAGGTCAACAGGTGGCTGTGGATCAAGGTGCACAAGTTCATCTACAACAACTTTAGAACCATTGTCACG
GTATTCTCTGTGGTCGGTGTTCTAGTGGGTATTTTCAAGACGCTCCTCTCTCTTAAGCAACACCAGTAAAGATGGACCA-
----TG-----CTTA----CCATCCTTA---TATACAAATACTCTG-TTT--CGTGCTTAATTATGATGGTGTGATGTTA
GTTTTC--------------------------------------------------------------------------
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>chr6B_2379
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-------------------------------------GAAGTCCAGGAAAAGACTCAGTTCAATGTCAATATGTACAAGT
GCCATTGAGCTTGCAGAAATTGGCATAAAGCTCAAAGACAACAAGACAAGAAATTTGACAGAACTCGGCATCCGCAAAGG
ACCCCTCTTTGGCGAGCTTTTCTTGACCCCACTGCTGCTAAGCAGTACACAAGCATGTTGTCTTGTAAACATGGCGGCTT
TTGAGATATGCACGGCCGCAAGTGATATACATGA------------TGATGAAGGGATGGCCGTCTGCTCATACATCGCC
CTCCTTTCAATGCTCATGGACCGGGAGGAGGATGTGCATGAGCTGCGAAGGAACCATCTTGTGGAAGGAGACCTCACAAA
CAAAGAGATCCTCGAGTTGTTCAAGAGCCTTAGCAAGGACCTTCATGGCGGCCCCTCCTACTTCCGCATCATGACCCGCA
TTGAAAGCTACAAAGTCAAAAGGTGGATGCGGATCAAGGTGCACAAGTTCATCTACAACAACTTCAGAACCATTGTGGCA
GTCTTCTCTGCAGTTGGTGTTCTAGTGGGCATATTCAAGACGCTCCTCTCTCTCAAGCAACACCAGTAAAGTCTGACAA-
----TG-----CATGTTTACCATCCTTA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------
>chr7A_2389
--------------------------------------------------------------------------------
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-----------------------------------------------AAAAGACTCGGCTCAACTTCAATATCTTCAAGT
GCCATCGAGCTTGCGGAAATCGGCATCAAGCTCAAAGCCATCCAGACAGGAAGTTTCACAGAAATTGGCCTAAGGAAAGG
ACCCCTCTTTGCCGAGCTTTTCCTGACACCACTGGTGCTAAGCAGTGTAACGGCATGCTGGCTCGTAAACATGGCGGCTT
CCGAAGTATGCACAACCTCAGGGGATCAACATGA------------TGACCAAGAGATGGCCATATGCTCGTACATCGCC
CTCCTTTCGATGCTTATGGACCGGGAGGAGGATGTGCACGAGCTACGAGTGAAGCATCTTGTGCAAGGAGAACTCACAAA
CAAGGAGATGCTCCGGTTCTTCAAGAGCCTTACCAAGCACCTATCTGTCGGCCGGTCCTACTGCCGTATCTTGAGACACA
TCGAGAGTTACAAGGTCAATAGGTGGATGTGGATTAAGCTGCACAGATTCATCTACAACAACTTCAAAACAATGGTCATG
GTCTTCTCTGTGGTTGGTGTTCTAGCCGGCATCTTCAAGACGCTCCTCTCTCTCAAGCAACACCAGTAAAGGTAGACCAG
ACCATG-----G-TA----CCATACTTA---CATACAAATAAAATAC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------
>chr6B_2401
TCAATT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------GTCAATATCTCCAGGA
GCCACCGAGCTTGCAGAAATTGGCATCAAGGTGAAAGCCATCAAGACGGGAAGTCCCACAGAAATGGACATCAGGAAAGG
ACCCCTCTTTGGCGATCTTTCCTTCACGCCACTGGCGCTAAACGTATCAAACGCATGTTTGCTTGCAAACATGGCGGCTT
TTGAGGTATGCACGGCATCATGGGATCTATGTGA------------TGTTCAAGAGACGGCCGTCTTCTTGTACCTCGCT
CTCCTTGGCATGCTCATGGACCAGAAAGAGGATGTGCGCGACCTACGAAGGAAGCATCTTGTGCAAGGAGAACTCACGAA
CCAAGAGGTGTTTGACTTTTTCAAGAGCCTTACCAGGCACCTGCCGGTGGGCCTCTCCTTTCTCCTCGTCTTAACGAGCA
TTGAGAAGTACCAGGCCAACAGGAGGATCTGGGTCAAGGCGCACAAGTTCATCTACAACAACTTCAAAACCATTTCCGCG
GTCCTCTCCGTGGTTGGTGTTCTGGTGGGCATCTTCAAGACGCTCCTCTCTCTCAAGCAACACCAGTAAAGTCAGACCA-
----TG-----TTTG----CCATA--------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------
>SNPs
--SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS------S----------S-S--------------------------S-------S----S----------------
S-------------------S------S---S----S----------------------S----------------S---
----------------------------------S---------S----------S-S--S-S-----------------
--------------------S---------------------------S------------S------------------
---S------------------S---SSS---------------------------------------------------
--S-----S----------------------------------------------------S------------------
------------S--------------------------------------------------S----------------
-----------------------------------------------------S-------------------SS-----
--------S-------------------------SS----------------S-S-----------------------S-
----------S--------------------------S--------------S-----S---------------------
------------S--------S----------------S----------S----S---------S---------------
--------------SSS------S---------------------S---------------S--S---SSSSSSSSS-S-
--S----------------------------S----------S----------------------S-----S-SS-----
--SS----SS-SSS------------------------------------------------------------------
----------------------S---S----------------S--S------S--------------S-----------
--------------------------------------------------------------------S-----------
--------------------S------S----------------------------------------------------
--------------------------------S-----------------------------------------S-----
-----------------------------S-----S----------------------------S---------------
--------------------------------------S-------S---------------------------------
---------------------------------------------------------------------S----------
----------------------S----------------------------------------S----------------
------------------------------------------------SSSS----------------------------
---S--S-------------------------------------S-S------S-S--SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS-S----S--SS----S-----S---SS-----S----S-SSSSSS-S-----------S-S--------
-S-S--SS------S--S--S-S-S-S---S---S-------S--SS-------SS-SS-SSSSSSSSSSSSSSSS-SSS
S-SSSSSSSSSSSSSSSS-----------S-S--S----S------S---------S----SS--SS----------SS-
-----SSSS---SSS------S-------S--S-S-S------S--SS-----S-S-S---S-S-----S---S-S-SS-
-----S--------S------S--S-----S--SSSSSS-SSS-SSSS-----------S--S-----S----SS-----
---S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_565
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CTGCTACCGTTGGAT
GGTGT---------------------------------------------------------------------------
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---------------------------------
>reverse_1576
--------------------------------------------------------------------------------
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-------------------------------------------------------ACCCCCGTTGAGGAGTACTT-----
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---------------------------------
>forward_1314
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------GAGTCCAAGTCCAACGCTGA----------------------------------------------
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---------------------------------
>reverse_3453
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------TGCCGATTTTGCACCTGTTG------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------
