>input_sequence_39799
--------------------------------------------------------------------------------
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---------------------------------------------ATGGAGTCCGGGGCGCCTCCCGCGTTGCCCTGCCC
CGTCGACGACGACGACGATTTCTACTGGGATGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCA
AGTCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAGACA---------CCCGCCCCCGCCCCCGTTCGCCCACGACCC
AACCCGGTCCCCGCCGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCCCC
CTCTTCGTGCATCCCGCTTTCCCCTTCCTCGCGAAATCAAAGAACCCAAGAACTCATCGTTCCACCCGCCCACCCA----
AATGTGCGTGGAAGAACTAGGGTTCTTGGTGCTGCAGATTCATCACTTGGAAGAAAATCCCC------------------
CAGTTTTTGGTAGAATGGCAACTCTGTCTGATTGTTCATGTG----ATACTCTGTTAGGGTTCAT---------------
-------------------------ATGGATGGGTCGGTTGGTTGATTTGTGTAGATTGGCACCTTGTTGTAGCGTATGT
TTATCTGCCTTAATCTTCTTGTGGGATTGAG---TCTGAATCTGGCCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAG
GCAAGGTACCAGCAGGTAGCATTCAGTGGCAAGATAGTGTACTGCCGGACGGCAATTGAAGTGGAGAAAGCTACGCGGGA
GATTGTACGCAAAATCGAAAGCATGAAGGCCTCTGGCCCGGTCTCCCTTGGTTTCGATCTCGAGTGGAAACCCTTTCCCA
GAAGAGGTTTGCTGTTCTGCCCATAGCCTAACGTTTAGTTGCATTTTCAAACTGCAAAATGTGAGTTTATGGATGAACGA
-TTTTAAGTCGACTCTTGCAAATGATCAAATCTGACGGAACAACCATTGCCATGGATTTTGCAGGAGAACCACCATGTAA
AGTCGCGTTGATGCAATTATGCATGGACAAAACTCATTGTTATCTCATGCATATCATTCACTCTGGCGTGCCTCCCATCT
TGAAATCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGT---------------------TTATTTCCCCA
TGGGTTGTACAATCTTTCCCCCACAGATGGGTTACCCTTTTTGGTCATGCAAGACATTGCTCTCTTGTCTATGCAGGTTG
GAGTATGTATAGACAATGATGCAAGGAAAATGTTCAATGATTATGATGTCCGTGTACAACCATTGATGGATTTATCAACT
GTTGCAAACGTCAAGTTAGCTGGGCCCTATAAAAGATGGAGTCTTGCTGCATTAACTGAAATGGTTACATGTAAAGAGGT
AATTCCTATTGTATTC----------------------------------------------------------------
------------------GGAGTATTATTTAGCACTGCTTTTTTTTTTACCCAGTTCTGTTAGCACCGGAAAGAAACAGT
CTTCAGGCATTTATTCATTTATGTGTTTTATGTATCATGGAAGTTTGGTTGGTTGAACGAAAGAGGTTCAATTATGATTA
GGTAGACAGAGCACCCAGATGCCTGCGGAACACAAGCTTTTTTTATAATCAACAATTCATTAAATTGAAATTCTTCTGGT
TGCTGAT-------ATTTTCATGCTTGGTCTATATCTCTATT----------------------------GTGGTTGAGA
CAATTTCAGTTATTATTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTGAACATTTTTTACTAGATAAGCTTGCTTG
GTTTATATTCTT-TACTGATTTTTTGTTTTCATTGCACTAACTTGTTGCTATGTTGCAATGCTCTTCACCACCTGCAACT
TCATGTCGATAAGTTGCCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTG
AGTATGCTGCTACCGATGCCTACATCTCGTGGTACTTGTATGAGGTATATGATGAATATACTATCCAGTTTGCTTTCTTA
TAAGCTGATATTCC--------------TGACAGCAATTACTACACTTTGCTAGGTACTACGGAGTCTTCCAGATTATAC
TCCTGATATTGAAACAGAGGTTGTTTAG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>chr2B_1_TraesCS2B01G010000
TGGATAGAGCCTCGTACCCTCCAAGAAGCCATTACTTGTTCAACATCATGCCATAATTTTAAATATTCACTAATTATCAA
TAAAAATATAGATTTATGTTGAGGGCAAATGCCCCCCCCCCCACCCACCAAACAATGCTCCATGGATTTGGAGTCGTTAT
TGATGTGAATTATTTTGATTTTCCACCTAATATGAGTTGTCTAGACAGACACTGATATGTAGTCAACAATTAGGGAACGT
CGTTTAGTTAACTCTAAGTACATAACGGGAAGGGGATTATGCATACATGACTTTGATGTAAGTTGGGTTGAATGTTGACG
AGAAATTGGTTAATAGAGCTCTTGGGCTGGTATGGTGTTGTGTGTAGCTCAAAGATATGGAGAGTTTGTTGTTTTTGCAC
ATAATTTTAG-TTTTTTTCCGGGTCTTCTAGATGCATGGGTGACGATGTTGGCGAGCAGCAATTGTGTGTTTAATCAA-T
AAATTGTGGAGAAATTATTGTGGACAAGCATCAGAGCTCAGTATTGGTGATTAGGTAAATATGTTGTATTTGTCTCCAAA
AAAGGTAAATATGTTGTATTTACTTCATAATTTTGATAGACAAATATAGGGAAAATGTGGAATTTTTAAATTGTGAACTT
TTTTGAAAATGATAAAATAAGTCAAACTTT-AAAAAACCATGAGTATTTTTCAAACCCGTCAACATTTTAAAAATTTCAG
GAACTACTTTGAAAAAAAATACGAAGATTTACATATTGATTTGACATTGTAGATGTTGATAATTTTTAACATAAATTTGA
TCAAATGTTATAAATTTTTAACACAAATCTAATACGCGGAGTAAAAAGTAAAGAGATTAGCTGAATGTTCCCTCTCAGT-
-CCCCACGATTTTAAAATTGGCAATATACATACAGGAAGAAAAAAAAAACTCGATCTTTCCCCCTCCTCCGATACTCCAA
GTCCCACCACCGGCGCCGGCGAGTCGTCCACCGGATCCGGTCGCCATGGAGTCCGGGGCGCCTCCCGCGTTGCCCTGCCC
CGTCGACGACGACGACGATTTCTACTGGGATGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCA
AGTCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAGACA---------CCCGCCCCCGCCCCCGTTCGCCCACGACCC
AACCCGGTCCCCGCCGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCCCC
CTCTTCGTGCATCCCGCTTTCCCCTTCCTCGCGAAATCAAAGAACCCAAGAACTCATCGTTCCACCCGCCCACCCA----
AATGTGCGTGGAAGAACTAGGGTTCTTGGTGCTGCAGATTCATCACTTGGAAGAAAATCCCC------------------
CAGTTTTTGGTAGAATGGCAACTCTGTCTGATTGTTCATGTG----ATACTCTGTTAGGGTTCAT---------------
-------------------------ATGGATGGGTCGGTTGGTTGATTTGTGTAGATTGGCACCTTGTTGTAGCGTATGT
TTATCTGCCTTAATCTTCTTGTGGGATTGAG---TCTGAATCTGGCCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAG
GCAAGGTACCAGCAGGTAGCATTCAGTGGCAAGATAGTGTACTGCCGGACGGCAATTGAAGTGGAGAAAGCTACGCGGGA
GATTGTACGCAAAATCGAAAGCATGAAGGCCTCTGGCCCGGTCTCCCTTGGTTTCGATCTCGAGTGGAAACCCTTTCCCA
GAAGAGGTTTGCTGTTCTGCCCATAGCCTAACGTTTAGTTGCATTTTCAAACTGCAAAATGTGAGTTTATGGATGAACGA
-TTTTAAGTCGACTCTTGCAAATGATCAAATCTGACGGAACAACCATTGCCATGGATTTTGCAGGAGAACCACCATGTAA
AGTCGCGTTGATGCAATTATGCATGGACAAAACTCATTGTTATCTCATGCATATCATTCACTCTGGCGTGCCTCCCATCT
TGAAATCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGT---------------------TTATTTCCCCA
TGGGTTGTACAATCTTTCCCCCACAGATGGGTTACCCTTTTTGGTCATGCAAGACATTGCTCTCTTGTCTATGCAGGTTG
GAGTATGTATAGACAATGATGCAAGGAAAATGTTCAATGATTATGATGTCCGTGTACAACCATTGATGGATTTATCAACT
GTTGCAAACGTCAAGTTAGCTGGGCCCTATAAAAGATGGAGTCTTGCTGCATTAACTGAAATGGTTACATGTAAAGAGGT
AATTCCTATTGTATTC----------------------------------------------------------------
------------------GGAGTATTATTTAGCACTGCTTTTTTTTTTACCCAGTTCTGTTAGCACCGGAAAGAAACAGT
CTTCAGGCATTTATTCATTTATGTGTTTTATGTATCATGGAAGTTTGGTTGGTTGAACGAAAGAGGTTCAATTATGATTA
GGTAGACAGAGCACCCAGATGCCTGCGGAACACAAGCTTTTTTTATAATCAACAATTCATTAAATTGAAATTCTTCTGGT
TGCTGAT-------ATTTTCATGCTTGGTCTATATCTCTATT----------------------------GTGGTTGAGA
CAATTTCAGTTATTATTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTGAACATTTTTTACTAGATAAGCTTGCTTG
GTTTATATTCTT-TACTGATTTTTTGTTTTCATTGCACTAACTTGTTGCTATGTTGCAATGCTCTTCACCACCTGCAACT
TCATGTCGATAAGTTGCCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTG
AGTATGCTGCTACCGATGCCTACATCTCGTGGTACTTGTATGAGGTATATGATGAATATACTATCCAGTTTGCTTTCTTA
TAAGCTGATATTCC--------------TGACAGCAATTACTACACTTTGCTAGGTACTACGGAGTCTTCCAGATTATAC
TCCTGATATTGAAACAGAGGTTGTTTAGGGAGCATATTTGCAGATATGCAAGAAATCGGAAAGTGTACTGTTAAGCTATT
TGATGACTCCCTAGTGTTCTCTGTTCTGTAACTTCGCTTCTCAACCAGGTCTGTAATGTTGAATCTT-------TTACTT
TACCTGCAGAACCTGGCGCCAGTTGTGACACTTTTTTTGCGAAAAACTGTGACTTATTTTCACCCCCAATGGTTCCATGT
TGTCTTTTCCTACTCAGGGTTTAGTACAAGATTATTTCTTATATGTGGAGAATTGGATATCATACATTTTACATTAGCCT
TTTCTGGTCTATGAATGGTTTCAAATGGTTCAAGAGTAGTATAATTTGTTTCGCGG--CATTTGGTTATATTGTCTGTAT
ATTCTGAAGATCTTCCTTAAGAAAATCAAAACTTGTTGGTTTTCCTTGTTTTT-TCCAAAACTTGCTAGTTCCAGTTAGG
CCTATCAAAGTCCTAG--CTTAGGGCACTCTCAATGCTCCAACCTGTTCTGTATCTGAATTTGCCGCATAGGATCAAATC
TGATGTGGAGGTATAATTAAAATGGGAGAGAGGAATGTCATATCTAAGCTTAGATATGGCTCTTGTAAGCGGAACTGGGG
CAATTAATTACCATCTGACCCCGTGTGCATATCCTCGTAGCCACAATACAGTCATCACCCAACCCGTCGCCTTCCTCTCC
TTGTCTGACCAAGCCACTACCATCATCTCAATTCAAAGCTGTGGTCACTGTTGTTCTCAGTTCGAAGCTGCCACAACCAT
TGTCTCTTCGTCGCCCAAAGTGTTGTGGCTGTTGCATCCTAGCCTTAGGAAGCCGTCTGCGTCACTTCTTCGCCGTCCCA
AGCAGCCGTTGGTGTTGCATCCTAGATTGGCCGACTTGAACAGCGAGCACGACCCTACTAACAACTCAATCTCCCCACAC
GAAAGCGCCCATCGGGACTTCTCCTTCAACTCCAGTCATCCATCTCCTTCTCCCATCTGCGCTTACAGCAAGCCTCTGGC
>chr2D_150
--------------------------------------------------------------------------------
---------------------------------------------------------------------GGAGTGGTTAT
TGATGTGAATTATTTTGATTTTCCACCTA--ATGAGTTGTCTACACAGACACTGGTATGCAGTCAACGATTAGGG-----
--------------------------------------------------------------------------------
---AATTGGTTGATAGAGCTCTTGGGCTGGTATGGTGTTGTATGTAGCTCAAAGACATGGAGAGTTTGTTGTTTTTGCAC
ACAATTTCAGTTTATTTTCTGGGGCTTCTAGATGAACGGGTGACAATGTTGTCGAGCAGCAATTGTGTGTTTAATCAAAT
AAATTATGGAGAAACTATTGTGGACAAGCATCAAAGCTCTGTATTGGTGATTAGGTAAATATGTTGTATTTGTCTCCAAA
AAAGCTAAATATGTTGTATTTATTTCATAATTTTGGTATACAAATATAGGAAAAATATGGAATTTTAT-ATTGTGAACTT
TTTTGAAAATCATAAAAGAAGTTGAACTTTAAAAAAATCATGAATATTTTTCAAACCCGTCAACATTTTAGAAATTTCAG
AAACTTTTTTGAAAAAAT-TACAAAGACTTATATATTGAT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>chr2D_852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GAGTAGCTGAATGTTCCCCCTCAGTC
CCTCCACAATCTTAAAATTGGCAATATACAGGAAG-----AAAAAAAAACTCGATCTTTCCCCCTCCTCGAGACTCCCAA
GTCCCACCACCGGCGCCGGCGAGTCGTCCACCGGATCCGGCCGCCATGGAGCCCGCAGCGCCTCCCGCGTTGCCCTGCCC
CGTTGACGACGACGACGATTTCTACTGGGACGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCG
AGTCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAAACCCCCGCCGCCCCCGCCCCCGCCCCCGTCCGCCCACGACCC
AACCCGGTCCCCGCGGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCCCC
CT----------------TTCCCCTTCCTCCCGAAAGCAAAGAACCCAAGAACTCATCGTTCCACCCGCCCACCCATCCA
AATGTGCATCCAAGAACTGGCAG---------------TTCATCACTTGGAAGAAAATCCCC------------------
CAGTTTTTGGTAAAATGGCAGCTCTGTCTGATTGTTCGTGTGTC--ATACTCTGTTAGGGTTCAGTACTTCAGTTTCATC
ACCGACAGTGTAGGGTTCATA----------GGGTGGGTTGGTTGGTTGGTGTAGACTGGCACCTAGTGGTAGTGTATGT
TTATCTGTCTTAATCATCTTGTGGGATTG--ACATCTGAATCCTGTCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAG
GCTAGGTACCAACAGGTATCATTCAGCGGCAAGATAGTGTACTGCCGGACTGGAGCTGAAGTGGAGAAAGCTACACGGGA
GATTGTACGCAAAATCGAAAGCATGAAGGCCTCTGGCCCGGTCTCCCTTGGTTTCGACCTCGAGTGGAAACCCTTTCCCA
GAAGAGGTTTGCTGTTCTGCCCATAGCCTAATGTTTAGTTGCATCCTCAAACTGCAAAATGTGGGTTTCTGGATCAATGG
TTTTTAAGTTGACTCCTGCAAATGATCTACTCTGACGGAACAGCCATTGCCATGGAATTTGCAGGAGAACCGCCTTGTAA
AGTCGCGCTAATGCAGTTATGCTTGGACAAAACTCATTGTTATCTCATGCATATCATTCACAGTGGAGTACCTCCTATAT
TGAAGTCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGGTTTTCCTCATAAGACATTTGCTTCTTTCTCCA
TAGATTATATGCTCTTCCCCCTAGAAACGGGTTGCCCCATTTGGTCATGTAAGACATTGTTGTCTTGTCTATGCAGGTTG
GAGTATGTATAGACAACGATGCAAGGAAAATGTTCAATGATTATGAAGTACATGTACAACCATTGATGGATTTGTCAACT
GTTGCAAATGTCAAGTTAGCTGGGACTTATAAAAGATGGAGTCTCGCTGCATTAACCGAAATGATCACATGTAAAGAGGT
AATTCCTATTGTATTAGCTACTCCCTCCGTCCCAAAATGTAAGATCATTTTTTACACTAAGATATTGTCAAAAAATGATC
TTACATTTTGGGATGGAGGGAGTATTATTTAGTACGGCTTTTTTTTTAT-CCAGTTCTGTTAGCACTGGAAAGAAACACT
CTTCAGGCATTTATTCATTTATGTGTTTTATGTATCAAGGAAGTTTGGTTGGTTGAACGATAGAGGTTCAATTATGATTT
GGTAGGCAGAACACCCAGATGCCTAGGGAATACAAGC-TTTTTTATGATCAATAAATTATTAAATTGAAATTCTTCTGGT
TGCTGAT-------ATTTGCATGCTTGGTCTATATCTCTGTATTGTGGCAATGCCTGATGGGGTAGTTCCGTGGTTGAGA
CAATTTCAGTTATTGTTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTAAACATTTTTTACTAGATAAACCTGCTTG
GTTTATATTCTTTTACTGATTTATTGTTTTCATTGCACTAACTTGTTGCTATGTTGCAATGCTCTTTACCACCTGCAACT
TCATGTCTATAAGTTGCCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTG
AGTATGCTGCTACCGATGCTTACATCTCGTGGTACTTGTATGAGGTATATGATGAATATACTATCCAGTTTGCTTTCTTA
TAAGCTGATATTCCTTTCTCCACGATCTTGACAGCAATTACTGCACTTTACTAGGTACTACGGAGTCTTCCAGATTATAC
TCCTGATATTGAAACAGAGGTTGTTTAGGGAACATATTTGCAGGTATACAAGAAATCGGAAA------------------
--------------------------------------------------------------------------------
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>chr2A_857
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------GCTGAAAGTTCCCTCTCAG-C
CCCCCACAATTTTAAAATTGGCAATATACATACAGGAAGAATG--AAAACTCGAACTTTTCCCCTCCCCCCAGACTCCCA
GTCCCACCACCGGCGCCGGCGAGTCGTCCACCGGATCCGGCCGCCATGGAGTCCGGGGCGCCTCCCGCGTTGCCCTGCCC
CGTCGACGACGACGACGATTTCTACTGGGACGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCG
AGTCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAAACCCCCG------CCGCCCCCGCCCCCGTCCGCCCACGACCC
AACCCGGCCCCCGCGGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCA--
CT----------------TTCCCCTTCCTCCCGAAATCAAAGAACCCAAGAACTCATCTTT--------CCACCCA----
AATGTGCGTGGAAGAACTAGGGTTCTTGGTGCTACAGTTTCACCACTTGGAAGAAAATCCCCTGTTAGGGTTCAGTTTTA
CAGTTTTTGGTAAGATGGCAGCTCTGTCTGATTGTTCATGTATTATATACTCTGTTAGGATTCAGTA--------TCGTC
ACCGACAGTGCTATGGTTCATATGGATGGGTTGGTTGGTTGGTCGATTTGTGTAGAATGGCACCTAGTTGTAGTGTATGT
TTATCTGCCTTAATCTTCTTGTGGGATTGACACATCTGAATCCTGTCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAG
GCTAGGTACCAACAGGTGGCATTCAGCGGCAAGATAGTGTACTGCCGGACAGCAATTGAAGTGGAGAAAGCTACACGGGA
GATTGTGCGCAAAATCGAAAGCATGAAGGCCTCTGGCCAGGTCTCCCTTGGTTTCGATCTCGAGTGGAAACCCTTCCCCA
GAAGAGGTTTGCTGTTCTGCCCATAGCCTAATGTTTAGTTGCATTTTCAGACTGCAAAATGTGGGTTTCTGGATGAATGG
TTTTTAAGTTGACTCCTGCAAATGATCTAATCTGACGGAACAACCATTGCCATGGATTTTGCAGGAGAACCGCCTTGTAA
AGTCGCGCTAATGCAGTTATGCATGGACAAAACTCATTGTTATCTCATGCATATCATTCACTCTGGGGTGCCTCCCATCT
TGAAATCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGGTTTTCCCCATAAGACATTTGCTTCTTTCTCCA
TAGATTATATGCTCTTCCCCCTAGAAACGGGTTGCCCCTTTTGGTCATGTAAGACATTGTTGTCTTGTCTATGCAGGTTG
GAGTATGTATAGACAACGATGCAAGGAAAATGTTCAATGATTATGAAGTACGTGTACAACCATTGATGGATTTATCAACT
GTTGCAAATGTCAAGTTAGCTGGGCCTTATAAAAGATGGAGTCTTGCTGCATTAACCGAAATGATCACATGTAAAGAGGT
AATTCCTATTGTATTAGCTACTCCCTCCGTCCCAAAATGTAAGATCATTTTTTACACTAAGATATTATCAAAAA-TGATC
TTACATTTTGGGACGGAGGGAGTATTGTTTAGTACTGC-TTTTTTTTAT-CCAGTTCTGTTGGCACTGGAAAGAAACACT
CTTCAGGCATTTATTCATTTATGTGTTTTATGTATCAAGGAAATTTGGTTGGTTGAACGATAGAGGTTCAATTATGATTT
GGTAGACAGAACACCCAGATGCCTAGGGAATACAAGC-ATTTTTATCATCAATAAATTATTAAATTGAAATTCTTCTGGT
TGCTGATATTTGCAATTTGCATGCTTGGTCTATATCTCTGCATTGTGGGAATGCTTGATGGGGTAGTTCCGTGGTTGAGA
CAATTTCAGTTATTGTTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTAATT-TTTTTTGCTAGATAAG-CTGCTTG
GGTTATATTCTTTTACTGATTTATTGTTTTCATTGCACTAACTTGTTGCTGTGTTGCAATGCTCTTTACCACCCGCAACT
TCATGCCTATAAGTTACCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTG
AGTATGCTGCTACGGATGCCTACATCTCGTGGTACTTGTATGAGGTATATGA---ATATACTATTCAATTTGCTTTCTTA
TAAGCTGATATTCCTTTCTCCACAGTCTTGACAGCAATTACTGCACTTTGTTAGGTACTACGGAGTCTTCCTGATTATAC
TCCTGATATTGAAACAGAGGTTGTTTAGGGAACATATTTGCAGATACGCAAGAAATCGGAAAGTGTACTGTTAAGCTA-T
TGATGACTCCCTAGTGTTCT-------GTAACTTCACTTCTCAACCAGGTCAGCAATGTTGAATCTTTTACAGTTTACAT
TACCTGCAGAAGCCGATGCTAG------------------------CTATGACTTATTTTCACCTCCAATGATTCTATGC
TGTCTTGTCCCACTCAGGGTTTAGCACAAGATTCTTTCTTATATGTGGAGAATTGGATACCATAGATTTTACATTAGCTT
TTACTTGTTTATGAATGGTTTCAAATGGTTCAAGGCTAGTTTAGTTTTTGTTTGGTGCCATTTAGTTATATTGTCTGTAT
ATTCTGAAAATCTTCCTTGAGAAAATCAAAACTTGTTGGTTTTCCTTGTTTTTATCAAAAACTTGCTAGTTCCAATTAGG
TCTGTCATAAAGTCCCAACTTAGGGCACTCCCAGTGCTCCAACCCGTTCCGTATCTAAATTTGCCATATAGCATTAAACC
TGATGTGGAGGTACAATTAAA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----
-----------------------------SS------------S----------S----S-------S-------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS--------S-----------------------------S-------------S------------------------
-S-----S-----S-----S---S----------S-S-------S------S----------------------------
-----S--------S------------------S-----S----------------------------------------
----S-----------------S------------S--S-----------S-----S---------SSS-----------
----------S------S----SS-------------S-----S--------------------------S---------
S----SS----------SS---S----S---S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----------------------
-------S--------------------------------------------------------------S-S-------
----------------------------------------S---------------------------------------
------------------------------S------------------------------------------------S
-------------------------------------S--S--------------------------S------------
--------------S-----------------------------------------------------------------
--SSSSSSSSSSSSSSSS------------S-------------------------------------------------
---------------------------------S---S------------------------------------------
------------S-------S-------------------------------------------S---------------
-----------------------------S-----S--------------------S--------S-------S------
------------------------------S-----------SS-S----------------------------------
--S--------S--------------S-----------------------S-----------------------S-----
--------------------------------------------------------------------------------
-------------------------------S-------------------------------S----S--------S-S
---------S-----S-----------S-------------------------------------------S--S-----
-------S-S-----S--------------------------------------------------S-------------
-----------------------------------------------S-----------------------S----S---
-S-S--S--SSS----S----S-S-S-S-----S---S-----------S---------S-S------------------
----------------S-----------------------------S--S------------------------------
--------S-----------------S-----------------------------S------S-S--------------
---------------S----------------------------------------------------------------
--------------------------------S--------------SSS----------------S-----------S-
-------------------------------------S----------------------S------------------S
----------S-------------SS----S------S--------S-----S--S-S----------------------
------------------S--------------------S-S--------------------------------------
--------------S------------------------------------S---------------------S------
----------------------S-------------------------------------------S-------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-------------------------------S----------------------------------------------S-
--------------------SSSSSSS--------S---------------S-S------------------------S-
-----------S-S-SS--S--SSSSSSSSSSSSSSSSSSSSSSSS--S---------------S------S---S---S
------S---S-------------S--------S-------------------------S----S-------------S-
--S--S--S-------------------------SS----S--S---S-S-SSS-S-------S----------------
--------S---------S-------------------------------------S-----------------S-----
S--S---S-SSSSSSS--------------S--S----------S----S------S--------SS----S--S---S-
-------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_142
--------------------------------------------------------------------------------
------------------------------------------ACCCACCAAACAATGCTCCA------------------
--------------------------------------------------------------------------------
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>reverse_1297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CTTTCCCCTTCCTCGCGAAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_362
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TGGGCTGGTATGGTGTTGTG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>reverse_2529
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ACCCAGTTCTGTTAGCACCG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>forward_2008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ACCACCATGTAA
AGTCGCGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3826
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TAAGCGGAACTGGGG
CAATT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
