>input_sequence_39785
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--------------------------------------------------ATGGCGCTCTCGAAGCCCCTCTTCTC----
-----------------CCGCCTCCTTCCCTTCTCCCTCCGCCTCCCCGCCCGCCCCCAGCACCGTCTCCTCTGCCTCGC
CACCCCCACCGATCTCCCGGATGCCCCCACCGACGCCTCCGCCGAGCGCCGCCGCCGCAAGCGCCGCCTCCGCGTGGAGC
CGCCGTCCTCCCGCGGCCCGACTCCCCAGCGCACCCCTGGAGGGCCCCGCCCCTCGTCTAACCCCAACGCTCTCAAGCTC
CCTGAGCCAGCGTCGGTCCTCTCCGGCAAGCGCCTCGATCTCCATCGCCGCATCCTCACGCTCGTCCGCGAGAACGACCT
CGACGAGGCGGCGCTCCTCACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCGTATTCACCTGCAACACAGTACTAG
CTGCGCTCCTCCGGCAGGCGCGCTACGCGGATCTCCTCTCCCTGCACCGCTTCGTCACCCAGGCCTCCGTCGCGCCCACC
GTCGCCACCCACAACCTCCTCCTTCAGGCCTACTGCGACTGCCGTCGCCCTGAAACCGCGCTGGAGCACTTCCGTCTCCT
ACTCAAGGACGACTCCCCTGTCCTCCCATCCCCAACCACATATCGTATCCTTGCCCGCTCCCTCGCCGAGAACGGCAAGC
TCGATCTGGCGCTCGAGCTCAAGGACGGCATGCTCGAGCGTGGCCTTATCGCTCCCGACCCCCAGGTCTATGCGTTCGTC
ATGGGTGGTTTTGTCAACGCCGGGGATGGTGACACGGCGGTCTCACTGTACGAGGAGCTTAAGGAGAAGCTTGGTGGCGG
GCTGATCCTTGATGGTGTGGTGTACGGGAACCTTATGAAGGGGTACTTTCTAAAGGGTATGGACAAGGAGGCCATGGATT
GCTACACCGAGGTGCTTGGAGAGGGATCCAAGGTGAGATTTGAGGCTGTTAGCTACAACATGGTGCTTGATGCGCTTGGT
AGGAATGGGAGGTTAGATGATGCAGTCGAGTTGTTTGATAGGATGTGCAAAGAGCATGACCCGCCCAGGAGGATTGCTGT
GAATCTTGGTAGTTTTAATGTGATGGTTGATGCGTACTGCCGTGTGGAAAGATTCCAGGACGCAATTGAGGTGTTTGGCA
AAATGGGTGAGAAAAGCTGCACACCAGATGCACTCTCATACAATAGTCTGATTGACTGGCTGGGGAAGAATGAACTTGTT
GGTGAGGCAGAAGGACTGTACAAGGAGATGGGGGAGCGTGGTATTAATCCTGACGAATACAGTTATGTCTTGCTCATTGA
GTCCTGCTTCAGGGTTGATAATGTGGATGACGCTGTTGGTTACTTCAATAAGATGTTTGATGTTGGTCTCAGGCCCAATG
CCAATTCCTTTAACAAAGTCATAAGTGGCTTGGTGAAGGTTGATAGGATTGACGAGGCACAGGGGTTCTTTGATCTGATG
CCCGAAAAGGAGGTCAAGCCAAACATTGCTAGCTATGAATCATTGTTGAGAGCATACATCAATGTTGCAAGGTTGGATGA
TGCAATTAAGATGGCCAAGGGTATTCTTTTGGATGAGAGTATTGTATTTACTGATGAATTGAAGGCACTTCTATACGGGG
CATTGCAGAAAGAGGGGAGAAACGGGGATATGACAAAGTTGTATGAGGATGTTGAGACGGAGAAAGCAGAGGCTGCAGCA
CGTGCAGCTGAAGAGAAGGCTAGGGCAGAGGCTCTTGCTAAAGAAGAAGAGGAGAAGAAGAAGGCTGAGGCTAAGGCTAA
GGAGGAATCTGCTGCCAGAGCAAGTAGAGCAGCTATTGACGCGGTGCTGGGTCGCAAGAGCGGAGCAGAAAATGGTGAAT
CGTCTCAAGAAATGAGTGTTGAGGAGGCACAGGTTGTTGAATCTCACAGTGACGCTGTTGGTGCTGCAGAACAGAATGAA
GGTGATGACCAGAAGAAAGAGTCTGGTGATGCAACGTCGCAGGTCATAGCTTCATCATCTTAG-----------------
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-------------------------------------------------------
>chr3A_1_TraesCS3A01G214000
TAACCGTTGGGGCATCAAACGACCTCCAAATGGAACGAAGTTTGACAGGCGGCCTATCGATGATGTAGCAAGGCCACTCA
ACAAATCTTGGCCCTTCCGATAACGTTTTTCTTCCGCTCACGAAACGAGATTTGAGAGGTGCAACGGGTGCATTTGTGAG
TGTCGGATTCCGAAACGGACAACAGGGAAAATGACCGGATACATGAGACGAACACGAATGCAAATGAGATGCACATGATG
ACATGAGATGAAATGCATGACATGAACAAAATTCAAAACGAGGAACAAAACCCAACCATGAATGATATAACATATCACAT
AGCCTGAAATGGCAAAAGTTGGAGTTACAATTATGGAATGTTACATCCGGGGCATTACAGTAATAGAGGTGTAGTGACGG
TGGTAGCAAAAGCGACAGTGTGCCATGGTGAGAAGGTAAGAGAGAGGGCATGCTTGGATGAGGAAAATCTGAAAACGGAA
CGATAAGTGAGGAGATACGGAAGAGGCGGACATAGGCC---GATCGTTGCGTTTACAGCCGGATGAATCTAATCAATTCC
CCTAAAAATTCCAAAATATCTCTTTTTATGATTGTTAGTACATTTATTATTATATATTTGAGCTACCTTTTTTTTGAGTA
ACATATATTTGAACTAGCAAGGGTAGAGGTACCCTAACATCCATCAATTTGCACCCCAGCTTCACATCCCTTTACC--TT
TTTTTTTTAGC---------------------------------------------------------------------
------------------------------------------------------------ATCAACGATGCTACTAGTCA
AATTGTCCGGGTTTCTCGGCCTTGGAA-----------------------------------------------------
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---------------------------------------------------------------TCGTTATCCACGCGTTC
ATGCACGGAAGACACGGACACGAAGGCATGTAGCCCAAGCCCATCATGGGATCTTGCCCAGCCCACACGTACCAGTAACG
GGCTTGTATTCTCTCTCTGAAGAGTTAGCCTATCGTGTTCGACTTCTCGCCATTTGCCATTTCCAGGAGAAAATATCCCC
AAATCCCTAGCTAAACCCTCGTCGGCTCGCCGTCGTGCTCCGTGGCCTCCATGGCGCTCTCGAAGCCCCTCTTCTC----
-----------------CCGCCTCCTTCCCTTCTCCCTCCGCCTCCCCGCCCGCCCCCAGCACCGTCTCCTCTGCCTCGC
CACCCCCACCGATCTCCCGGATGCCCCCACCGACGCCTCCGCCGAGCGCCGCCGCCGCAAGCGCCGCCTCCGCGTGGAGC
CGCCGTCCTCCCGCGGCCCGACTCCCCAGCGCACCCCTGGAGGGCCCCGCCCCTCGTCTAACCCCAACGCTCTCAAGCTC
CCTGAGCCAGCGTCGGTCCTCTCCGGCAAGCGCCTCGATCTCCATCGCCGCATCCTCACGCTCGTCCGCGAGAACGACCT
CGACGAGGCGGCGCTCCTCACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCGTATTCACCTGCAACACAGTACTAG
CTGCGCTCCTCCGGCAGGCGCGCTACGCGGATCTCCTCTCCCTGCACCGCTTCGTCACCCAGGCCTCCGTCGCGCCCACC
GTCGCCACCCACAACCTCCTCCTTCAGGCCTACTGCGACTGCCGTCGCCCTGAAACCGCGCTGGAGCACTTCCGTCTCCT
ACTCAAGGACGACTCCCCTGTCCTCCCATCCCCAACCACATATCGTATCCTTGCCCGCTCCCTCGCCGAGAACGGCAAGC
TCGATCTGGCGCTCGAGCTCAAGGACGGCATGCTCGAGCGTGGCCTTATCGCTCCCGACCCCCAGGTCTATGCGTTCGTC
ATGGGTGGTTTTGTCAACGCCGGGGATGGTGACACGGCGGTCTCACTGTACGAGGAGCTTAAGGAGAAGCTTGGTGGCGG
GCTGATCCTTGATGGTGTGGTGTACGGGAACCTTATGAAGGGGTACTTTCTAAAGGGTATGGACAAGGAGGCCATGGATT
GCTACACCGAGGTGCTTGGAGAGGGATCCAAGGTGAGATTTGAGGCTGTTAGCTACAACATGGTGCTTGATGCGCTTGGT
AGGAATGGGAGGTTAGATGATGCAGTCGAGTTGTTTGATAGGATGTGCAAAGAGCATGACCCGCCCAGGAGGATTGCTGT
GAATCTTGGTAGTTTTAATGTGATGGTTGATGCGTACTGCCGTGTGGAAAGATTCCAGGACGCAATTGAGGTGTTTGGCA
AAATGGGTGAGAAAAGCTGCACACCAGATGCACTCTCATACAATAGTCTGATTGACTGGCTGGGGAAGAATGAACTTGTT
GGTGAGGCAGAAGGACTGTACAAGGAGATGGGGGAGCGTGGTATTAATCCTGACGAATACAGTTATGTCTTGCTCATTGA
GTCCTGCTTCAGGGTTGATAATGTGGATGACGCTGTTGGTTACTTCAATAAGATGTTTGATGTTGGTCTCAGGCCCAATG
CCAATTCCTTTAACAAAGTCATAAGTGGCTTGGTGAAGGTTGATAGGATTGACGAGGCACAGGGGTTCTTTGATCTGATG
CCCGAAAAGGAGGTCAAGCCAAACATTGCTAGCTATGAATCATTGTTGAGAGCATACATCAATGTTGCAAGGTTGGATGA
TGCAATTAAGATGGCCAAGGGTATTCTTTTGGATGAGAGTATTGTATTTACTGATGAATTGAAGGCACTTCTATACGGGG
CATTGCAGAAAGAGGGGAGAAACGGGGATATGACAAAGTTGTATGAGGATGTTGAGACGGAGAAAGCAGAGGCTGCAGCA
CGTGCAGCTGAAGAGAAGGCTAGGGCAGAGGCTCTTGCTAAAGAAGAAGAGGAGAAGAAGAAGGCTGAGGCTAAGGCTAA
GGAGGAATCTGCTGCCAGAGCAAGTAGAGCAGCTATTGACGCGGTGCTGGGTCGCAAGAGCGGAGCAGAAAATGGTGAAT
CGTCTCAAGAAATGAGTGTTGAGGAGGCACAGGTTGTTGAATCTCACAGTGACGCTGTTGGTGCTGCAGAACAGAATGAA
GGTGATGACCAGAAGAAAGAGTCTGGTGATGCAACGTCGCAGGTCATAGCTTCATCATCTTAGAGGTTCTTTGTGCCTCA
GTTAATGATTTTAGTTTCATTTCAATAGTACAATATGATTAGAAGAGCTTACGTTATGAGAATGGTTAATGATTAGTTTC
ATTCCAATAGTACATCTAGTGATGCTTATGTTCATGGTTTGAATGGAATTTACATGTTATGAGAGCTCCCAGTGATTGTA
TGCGGGAACCATTTTGTACCACATCTCTTATTTCGGAGATAGTACAGATTTCTATGCCCCTGAAATCACTCAATTTATTA
TGGCATATGATCACAGGCTAGATAAATTCTCCTTTTCACACTCTTTCTCCTGCAAGTGTAAAGTGATCAGCTTTTCATTT
ACTTAAGTATTGCTTATAATAAGATCCATAAGAGATGAC---TATTGCACTAGTAATTCTTCTTTCACCTTTTCTTATTT
GCCCTTATACATTTTGTAAAGTATACTAGGTAAGTGCCCGTGCGTTGCAACGGGGAAACACTCTTGTATGCATGGGTGAT
ATATTTAGGTGATACTATCAAGAATCAACTCAACCAAAAACTTCATTAAGCTTTACTATCATGTAAATGCAATTTGCTCA
TTTCCCAATTGAACC-----AATTACCTTCAACTGGACAATATGTGACCTACCTTCAAAATTGAGCTTTACCATCATGTA
AATGCAATTTGCTCATTTCCCAATTGAACCTAGGTAATTACCTTCAACTGGACAATATGGGACTTACCTTCAAAATTGAG
CTGTGTAAATGCAATTTGCTCAATTCCCAATTCAACCTAGGTAATTACCTTCAAATTTGGTCAGCTGGACCATATGTTAA
TTACATTCAAAATTTCTTGACCACCTA------------------------TAATAAGGTATAGAAAACAAAAACAGATC
ATGATGCTACTTGTTAGTCAAGCATACTGACAAGTACTCCCTAGCTTCTTTGTCAGTATTCGGTCACAGTCAAACCTCTG
ACATGTGGGAAATGTAACAGATGGGATGGTAAAGTAACTTCATTAAGTTAGTTCA
>chr3D_380
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------GTAGTAGAGGCGTAGTGACGG
TGGTAGCGAAAGAGACAGTGCGCAATGGTGAGAGGGTAAGAGAGAGGGCGTGCTTGGATGAGGAAAATCCGAAGAGGAAA
GGGCAAGTGAGGAGATACGGAAGCGGCGGACATGGCCCAGGGATCGTTGCGTTTACAGCCGGATGAATCTAATCAATTCC
CCTAAAAATTGCAAAATATCTCTTTTTATGATTGTTGGTACATTTATTATTATATATTTGAACTAGCT------------
------------------AAGGGTAGAGGTACCCTAATATCCATCAATTTGCACCCCGGCTTCACATCCCTTTACC--TT
TTTTT----GC---------------------------------------------------------------------
------------------------------------------------------------ATCAACGGTGCTACTAGTCA
AATTATCCGGGTTTCTCGGCCTTAGAGCAACTCTAGCAGACCCCGCAAAACGCCCGGCCCACAAAAATTCCGGCGAGTAT
GCGGGCTCGGGCCAATTTTGCGGCCAGAACAGAGCCCGCATACTCGCCCGGCCCGCAATTTTTTTGCCGCAGCCCGCAAA
CCGCATGCCCCGAGCACTATAAGTGCGGTTCCGCGACCCTTTTGCGGGTCCAAACCCTATCCCCCCGCCGCCGCGAGCCA
CCCGATCCCCCTTTCTCCTCTCCCAATTTCTCGCCGCCGGCGACCCTCCGCCCCGCCTCCAGCCGCCATGTGGGGGCGAA
TGTGGAGCTCCGGACGCGGCTCCGACAGCAGATCCGGCCTTGAGAGGGACCCGGAGTGCGAGCGCCGCGTCTGGTCCGAC
AGCGCGAGGAAGCGCGGCGCGCGGAAGTGGACCAACCGCGGGCTTTCGCCGCCGGCGAGCTTCGACCGGCGCGAGACGGT
GGAGTACGACCGCCGGCACGCGTCGATCTCCTCCGCGCGCTCTTCGTACGCCGGATCCTCCTCCTCCTCCGCCGCGGGCT
TCCTCCCTGTGAAGAGGGAGTGGTCGGACGAGGAGGAGGAGCCGGAGCCGCCGGCGCCGTTCGCTCGGCCGGTGAAGGAG
GAGCCCGAAGAGCCCGCTCCGCTCGGCCGCCGCGGAGTCGTCGGGCCCGAGGACTACGTCGCGGAGTTCGACGCCGTCGC
CGCCGCCATCGCCGAGCGGAGCGTGCGCGAGGAGGAGGAGCGCCGGCGCCACGCCGAGGAGCTCGAAGCCCTCAAGTGGC
GGCAGGCGGTCGCCGACAACGTTGCCGCCAACGAGAAGGCTGACGAGTGGCGCCGCATCCGCGCGGAGCAGGCGGAGAAG
TACGTCGATCTCTGCAGCTCCGGCGAGGAGGATTGAGCGTCCGGCTCCTCCACGGTGTCGTCCAGTTGCCGCTACCTCGC
CGCCGTCAGATCCGGACCCCTAGTATTAGTTTAACGTAGTATGTAGTATAACTATGCTTGTAGTTTGTGATGAACTATGT
AGTATGCGATGAACAATGTAGTATGCGATGAACAATGTAGTATGTGATGAACTATGTTTGTGCAATTTATTCCGTGAAAG
TATTTTTTCAAATTATGCAAGTTTAGATACGGGTTCTACTCGGCCGCGTATGTTTTTGACCCACAAAAGCGATTTTCGTG
AACCCGCAAACGCGTTTTGCGGGTCTTATTTTTGCGGGTCCGTTAGAGTTGCTCTTAGAATCGTCGTTATCCCCGCGTTC
ATGCGCGGAAGACACGGAC--GAAGGCATGTAGCCCAAGCCCATCATGGGATCTTGCCCAGCCCATC-------------
-------------------------------ATCGTGTTCGACTTGTCGCCATTTGCCATTTCCAGGAGAAAATATCCCC
AAATCCCTAGCTAAACCCTCGTCGGCTCGCCGTGGTGCTCCGTGGCCGCCATGGCGCTCTCGAAGCCCCTCTTCTC----
-----------------CCGCCTCCTTCCCTTCTCCCTCCGCCTCCCCGTCCGCCCCCAGCACCGTCTCCTCTGCCTCGC
CACCCCCACCGATCTCCCGGATGCTCCCACCGACGCCTCCGCCGAGCGCCGCCGCCGCAAGCGCCGCCTCCGCGTGGAGC
CGCCGTCCTCCCGCGGCCCGACCCCCCAGCGCACCCCTGGAGGGCCCCGCCCCTCGTCTAACCCCAACGCTCTCAAGCTC
CCCGAGCCAGCGTCGGTCCTCTCCGGCAAGCGCCTCGATCTCCATCGCCGCATCCTCACGCTCGTCCGCGAGAACGACCT
CGACGAGGCGGCGCTCCTCACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCGTATTCACCTGCAACACAGTACTAG
CGGCGCTCCTCCGCCAGGCGCGCTACGCGGATCTCCTCTCCCTGCACCGCTTCGTCACCCAGGCCTCCGTCGCGCCCACC
GTCGCCACCCACAACCTCCTCCTTCAGGCCTACTGCGACTGCCGTCGCCCTGAAACCGCGCTGGAGCACTTCCGTCTCCT
ACTCAAGGACGACTCCCCTGTCCTCCCATCCCCCACCACATATCGCATCCTTGCCCGATCCCTCGCCGAGAACGGCAAGC
TCGATCTGGCGCTCGAGCTCAAGGACGGCATGCTCGAGCGTGGCCTTATCGCCCCCGACCCCCAGGTCTATGCGTTTGTC
ATGGGTGGTTTTGTCAACGCCGGGGATGGTGACACGGCGGTCTCACTGTACGAGGAGCTTAAGGAGAAGCTTGGTGGCGG
GCTGATCCTTGATGGTGTGGTGTACGGGAACCTTATGAAGGGCTACTTTCTAAAGGGTATGGAGAAGGAGGCCATGGATT
GCTACACCGAGGTGCTTGGAGAGGGATCCAAGGTGAGATTTGAGGCTGTTAGCTACAACATGGTGCTTGATGCGCTTGGT
AGGAATGGGAGGTTAGATGATGCAGTCGAGTTGTTTGATAGGATGTGCAAAGAGCATGACCCGCCCAGGAGGATTGCTGT
GAATCTTGGTAGTTTTAATGTGATGGTTGATGCGTACTGCCGTGTGGAAAGATTCCAGGACGCAATTGAGGTGTTTGGCA
AAATGGGTGACAAGAGCTGCACACCAGATGCACTCTCATACAATAGTCTGATTGACTGGCTGGGGAAGAATGAACTTGTT
GGTGAGGCAGAAGGACTGTACAAGGAGATGGGGGAGCGTGGTATTAATCCTGACGAATACACTTATGTCTTGCTCATTGA
GTCCTGCTTCAGGGTTGATAATGTGGATGACGCCGTTTGTTACTTCAATAAGATGTTTGATGTTGGTCTCAGGCCCAATG
CCAATGCCTTTAACAAAGTCATAAGTGGCCTGGTGAAGGTTGATAGGATTGACGAGGCACAGGGGTTCTTTGATCTGATG
CCCGAAAAGGAGGTCAAGCCAAACATTGCTAGCTATGAATCACTGTTGAGAGCATACATCAATGTTGCAAGGTTGGATGA
TGCAATTAAGATGGCCAAGGGTATTCTTTTGGATGAGAGTATTGTGTTTACTGATGAATTGAAGGCACTTCTAGATGGGG
CATTGCAGAAAGAGGGGAGAAACGGGGATATGACAAAGTTGTATGAGGATGTTGAGACGGAGAAAGCAGAGGCTGCAGCA
CGTGCAGCTGAAGAGAAGGCTAGAGCAGAGGCTCTTGCTAAAGAAGAAGAGGAGAAGAAGAAGGCTGAGGCTAAGACTAA
GGAGGAATCTGCTGCCAGAGCAAGTAGAGCAGCTATTGACGCGGTGCTGGGTCGCAAGAGCGGAGCAGAAAATGGTGAAT
CGTCTCAAGAAATGAGTGTTGAGGAGGCACAGGTTGTTGAATCTCACAGTGACGCTGTTGGTGCTGCAGAACAGAATGAA
GGTGATGACCAGAAGAAAGAGTCTGTTGATGCAACGTCGCAGGTCATAGCTTCATCATCTTAGAGGTTCTTTGTGCCTCA
GTTAATGATTTTAGTTTCATTCCAATAGTACAATATGATTAGAAGAGCTTACGTTATGAGAATGGTTAATGATTAGTTTC
ATTCCAATAGTACATCTAGTGATGCTTATGTTCATGGTTTGAATGGAATTTACATGTTATGAGAGCTCCCAGTGATTGTA
TGCGGGAACCATTTTGTACCACATCTCTTATTTCGGAGATAGTACAGATTTCTATGCCCCTGAAATCACTCAATTTATTA
TGTCATATGATCACAGACTAGATAAATTCTCCTTTTTACACTCTTTCTCCTGCAAGTGTAAAGTGACCAGCTTTTCATTT
ACTTAAGTATTGCTTATAATAAGATCCATAAGAGATGACTGATATTGCACTAGTAATTCTTCTTTCACCTTTTCTTATTT
GCCCTTGTACATTTTGTAAAGTATACTAGGTAAGTGCCCGTGCGTTGCAACGGGGAAACACTCTTGTATGCATGGGTGAT
ATATTTAGGTGATACTATCAAGAATCAACTCAACCAAAAACTTCATTTAGCTTTACCATCATGTAAGTGCAATTTGCTCA
TTTCCCAATTGAACCTAGGTAATTACCTTCAACTGGAAAATATGCGACTTACCTTCAAAATTGAGTTTTACCATCATGTA
AATGCAATTTGCTCATTTCCCAATTGAACCTAGGTAATTACCTTCAACTGGACAATATGGGACTTACCTTCAAAATTGAG
CTGTGTAAATGCAATTTGCTCAATTCCCAATTCAACCTAGGTAATTACCTTCAAATTTGGTCAGCTGGACCATGTGTTAA
TTACATTCAAAATTTCTTGACCACCTATATGGAGCCGTTACATCCATGAACTAATAAGGTATAGAAAACAAAAACAGATC
ATGATGCTACTTGTTAGTCAAGCATACTGACAAGTACTCCCTAGCTTCTTTGGCAGTATTCGGTCACAGTCAAACCTCTG
ACATGTGGGAAATGTAACAGATGGGATGGTAAAGTAACTTCATTAAGTTAGTT--
>chr3B_380
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------GTAGTAGAGGTGTAGTGACGG
TG-TAGCAAAAGCAACAGTGCGCCATGGTGAGAAGGTAAGAGAGAGGGCGTGCTTGGATGAGGAAA-TCTGAAGACGGAA
GGATAAGTAAGGAGATACCGAAGCGACGGACATGGGCCAGGGATCGTTGTGTTTACAGCCGGATGAATCTAATCAATCCC
CCTAAAAAATTCAAAATATCTCTTTTTATGATTGTTATTACATTTATTATT---------AACTAGCT------------
------------------AAGGGTACAGGTACCTG-ATATCCATCAATTTGCACCCCAGCTTCACATCCCTTTACCCTTT
TTTATTTTAGCATCGACAGTGCTACTATCTATCTGCCAGAGCTATGAGTTGATCACGAGATCTTATAGATTTCACCTCTA
GCTTACTTCAATTTGTTTGGGATTAAAGTCTTTGTTGTCGTCGTCGTTGTTGTGGTTGTTATCAACGGCGCTACTAGTCA
AATTGTCCGGGTTTCTCGGCCTTGGAA-----------------------------------------------------
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---------------------------------------------------------------TCGTTATACACGCGTTC
ATGCGCGGAAGACACGGAC--GAAGGCATGTAGCCCAAGCCCATCATGGGATCTTGCCCAGCCCACACGTACCAGTAACG
GGCTTGTATTCTCTCTGAAGAG---TAGCCTATCGTGTTCGACTTCTCGCCATTTGCCATTTCCAGGAGAAAATATCCCC
AAATCCCTAGCTAAACCCTCGTCGGCTCGCCGTCGTGCTCCGTGGCCGCCATGGCGCTCTCGAAGCCCCTCTTCTCCCGC
CTCCTTCCCTTCTCCCTCCGCCTCCTTCCCTTCTCCCTCCGCCTCCCCGTCCGCTCCCAGCACCGTCTCCTCTGCCTCGC
CACCCCCACCGATCTCCCGGATGCCCCCACCGACGCCTCCGCCGAGCGCCGCCGCCGCAAGCGCCGCCTCCGCGTGGAGC
CGCCGTCCTCCCGCGGCCCGACTCCCCAGCGCACCCCTGGAGGGCCCCGCCCCTCGTCTAACCCCAACGCTCTCAAGCTC
CCCGAGCCAGCGTCCGTCCTCTCCGGCAAGCGCCTCGATCTCCATCGCCGCATCCTCACGCTCGTCCGCGAGAACGACCT
CGACGAGGCGGCGCTCCTCACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCGTATTCACCTGCAACACAGTACTAG
CCGCGCTCCTCCGCCAGGCGCGCTACGCGGATCTCCTCTCCCTGCACCGCTTCGTCACCCAGGCCTCCGTCGCGCCCACC
GTCGCCACTCACAACCTCCTCCTTCAGGCCTACTGCGACTGCCGTCGCCCTGAAACCGCGCTGGAGCACTTCCGTCTCCT
ACTCAGGGACGACTCCCCTGTCCTCCCATCCCCCACCACATATCGCATCCTTGCCCGCTCCCTCGCCGAGAACGGCAAGC
TCGATCTGGCGCTCGAGCTCAAGGACGGCATGCTCGAGCGTGGCCTTATCGCTCCCGACCCCCAGGTCTATGCGTTCGTC
ATGGGCGGTTTTGTCAACGCCGGGGATGGTGACACGGCGGTCTCACTGTACGAGGAGCTTAAGGAGAAGCTTGGTGGCGG
GCTAATCCTTGATGGTGTGGTGTACGGGAACCTTATGAAGGGGTACTTTCTAAAGGGTATGGAGAAGGAGGCCATGGATT
GCTACACCGAGGTGCTTGGAGAGGGATCCAAGGTGAGATTTGAGGCTGTTAGCTACAACATGGTGCTTGATGCGCTTGGT
AGGAATGGGAGGTTAGATGATGCAGTCGAGTTGTTTGATAGGATGTGCAAAGAGCATGACCCGCCTAGGAGGATTGCTGT
GAATCTTGGTAGCTTTAATGTGATGGTTGATGCGTACTGCCATGTGGAAAGATTCCAGGACGCAGTTGAGGTGTTTGGCA
AAATGGGTGAGAAGAGCTGCACACCTGATGCACTCTCATACAATAGTCTGATTGACTGGCTGGGGAAGAATGAACTTGTT
GGTGAGGCAGAAGGACTGTACAAGGAGATGGGGGAGCGTGGTATTAATCCTGACGAATACACTTATGTCTTGCTCATTGA
GTCCTGCTTCAGGGTTGGTAATGTGGATGACGCCGTTGGTTACTTCAATAAGATGTTTGATGTTGGTCTCAGGCCCAATG
CCAATGCCTTTAACAAAGTCATAAGTGTCTTGGTGAAGGTTGATAGGATTGACGAGGCACAGAGGTTCTTTGATCTGATG
CCCGAAAGGGAGGTCAAGCCAAACATTGCTAGCTATGAATCACTGTTGAGAGCATACATCAATGTTGCAAGGTTGGATGA
TGCAATTAAGATGGCCAAGGGTATTCTTTTGGATGAGAGTATTGTGTTCACTGATGAATTGAAGGCACTTCTAGATGGGG
CATTGCAGAAAGAGGGGAGAAACGGCGATATGACAAAGTTGTATGAGGATGTTGAGACGGAGAAAGCAGAGGCTGCAGCA
CGTGCAGCTGAAGAGAAGGCTAGAGCAGAGGCTCTTGCTAAAGAAGAAGAGGAGAAGAAGAAGGCTGAGGCTAAGGCTAA
GGAGGAATCTGCTGCCAGAGCAAGTAGAGCAGCTATTGACGCGGTGCTGTGTCGCAAGAGCGGAGCAGAAAATGGTAAAT
CGTCTCAAGAAATGAGTGTTGAGGAGGCACAGGTTGTTGAATCTCACAGTGACGCTGTTGGTGCTGCAGAACAGAATGAA
GGCGATGACCAGAAGAAAGAGTCTGGTGATGCAGCGTCGCAGGTCATAGCTTCATCATCTTAGAGGTTCTTTGTGCCTCA
GTTAATGATTTTAGTTTCATTCCAATAGTACAATATGATTAGAAGAGCTTGCGTTATGAGAATGGTTAATGATTAGTTTC
ATTCCAATAGTACATCTAGTGATGCTTATGTTCATGGTTTGAATGGAATTTACATGTTATGAGAGCTCCCAGTAATTGTA
TGCGGGAACCATTTTGTACCACATCTCTTATTTCGGAGACAGTACAGATTTCTATGCCCCTGAAATCACTCAATTTATTA
TGTCATATGATCACAGACTAGATAAATTCTCCTTTTCACACTCTTTCTCCTGCAAGTGTAAAGTGATCAGCTTTTCATTT
ACTTAAGTATTGCTTATAATAAGACCCATAAGAGATGACTGATATTGCACTAGTAATTCTTCTTTCACCTTTTCTTATTT
GCCCTTATACATTTTGTAAAGTATACTAGGTAAGTGCCCGTGCGTTGCAACGGGGAAACACTCTTGTATGCATGGGTGAT
ATATTTA--TGATACTATCAAGAATCAACTCAACCAAAAACTTCATTTAGCTTTACCATCATGTAAATGCAATTTACTCA
TTTCCCAATTGAACCTAGGTAATTACCTTCAACTGGACAATATGTGACTAAATTTCAAAATTGAGCTTTACCATCATGTA
AATGCAATTTGCTCATTTCCCAATTGGGCCTAGGTAATTACCTTCAACTGGACAATATGGGACTTACCTTCAAAATTGAG
CTGTGTAAATGCAATTTGCTCGATTCCCAATTCAACCTA-----------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------------
--------------------S----------------------------S-----------------------S------
S----------------------S---------S----------------------------------------------
----------S--------------------------------------------------S---S--SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-------------------S------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
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----S--------------SS-----------------------------------------------------------
----------------SSSS--SSS-------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-----------S------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-----------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------------------------------------------------S------------------
---------------------------------S----------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------------S-------------------------------------
---------------------------------------------S---------------------------S-S----
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------S-----------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
-----------------------------------------------------SS
>forward_128
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----------------------------TTCTTCCGCTCACGAAACGA--------------------------------
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>reverse_3264
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---------------------------------------------------------------CAAGGAGGCCATGGATT
GCT-----------------------------------------------------------------------------
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-------------------------------------------------------
>forward_373
--------------------------------------------------------------------------------
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---------------------------------TGGAATGTTACATCCGGGGC---------------------------
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>reverse_3534
--------------------------------------------------------------------------------
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-------------AAGCTGCACACCAGATGCA------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>forward_374
--------------------------------------------------------------------------------
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----------------------------------GGAATGTTACATCCGGGGCA--------------------------
--------------------------------------------------------------------------------
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>reverse_3662
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-------------------------------------------------------------GTTATGTCTTGCTCATTGA
GTCCTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_2165
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-----------------------------------------------------------------GTTATCCACGCGTTC
ATGCA---------------------------------------------------------------------------
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>reverse_3994
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-------------------------------------------------------------------------TACGGGG
CATTGCAGAAAGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>forward_3006
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-------------------------CCATCCCCAACCACATATCGT----------------------------------
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>reverse_4104
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-----------------------GGCAGAGGCTCTTGCTAAAGA------------------------------------
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-------------------------------------------------------
>forward_3534
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TGTTTGGCA
AAATGGGTGAGAAA------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_5333
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----------------------------------------------------TCAGTATTCGGTCACAGTCAAAC-----
-------------------------------------------------------
