>input_sequence_39782
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--------------------------------------------------------AT------GGAGCAGCTCCAAGAA
ACACCGCACGGAGATGGAAATCTCAAGGCCGCCCCAGATCCCGGACTCGGAGGCGGCAATGGCGGCTGCATCGCTCCCAA
TGGCACCCTCCCCTGCGGCTGGCTCGGTCGTCTGTCCCGCGAGCTGCATTGGAGCTTCGTGCTCGCCGTCGTCGCCGTCT
ACGGCGCCTGCCAGGGCGTCGGCTCCTCATTCGGCAGCGTCGCCGCGGGGTACTACTGGAAGGACGTGCAGCGCGTGCAG
CCGGCCGCCTCGCAGTTCTACCAGGGCGTCGTCAACGTGCCCTGGGTCGTCAAGCCCCTGTGGGGCCTCTTCACCGACGT
CGTCCCCGTCGCCGGCTACCGCCGCCGCCCGTACCTCCTCCTCGCAGGTGAGCCAATGCTTTGCTTGCT-ACGGTCAACG
TCGTTCTGAATCTGCTCGCCTTCTTAAGCTGCTGTCTTGATCCATGTATTGTAACCAACTATGTAAAGGCGTCATGGGCG
TGTCGTCCATGCTCACGCTTGCTCTGCGCCGCACGCCGGCGATCGCACCGGCATTGGTGGCGTTCACGACGCAGGCCGCG
GGCGCCGCCATAGCCGACGTGGTGGTGGACGCCATGGTCGCGCAGAACAGCATAAGCCACCCTCCGCTCGCCGCCGACAT
GCAGAGCATGTGCGGGTATTGCTCCTCCGCCGGCGCATTGGTGGGGTACTCCATCAGCGGCCTCGTCGTTCACGCAATAG
GTTCCCAGGTCTGAAGTCTGAACTGAACATTTCCTGAGAGAAGATGGATGGTATTGGTAGACATTCAACATACAGATTCC
AATGTTCTTGCCATGTCCATTTGATCTT----TTCAGGGGGCTCTTGGCTTGCTGAGCATCCCCTCCGTGCTCGTATTTT
CGGCCGGGATTCTTGTCAAGGAGGAGCGGGCCAAGGATTTCGAGTACAACCAGGTGAGCTCGAGCTTCAGAAGCTGCCAA
TTAAATACAGTTATGAACATGCATCA----CTCTCAAGGTTGTTAACTGCAATATAT-----TCAGGTTCACAAGAAGTT
CTACGAAGCAGTTGAATCAATGTGGTCAACATTGAAGTGCCCGCAAGTCTGGAGGCCGTGCGTTTACATGTTCTTAATGT
TCGTGCTAAGCCCG----GACATCCAAGGAGGGCTGTTCTACTGGTACACAGATTCGAGCACCGGACTCGCATTTTCCGA
GGTAG--------TT---TCTGCTAAAAAATGTTCTTCAGATGCATGCTAGAAGCTAGAATTACATAGACTACTAA---A
ACACACGACAAAGATCGAGAAGAACTGATGGATGGGATGGGACCTGCCATTTTTCTGCAGGGATTCAT--TGGTCTCATC
TACTC---GATAGGCTCAGTGGGCTCGCTGCTCGGCGTCCTGCTCTACCAGAACATGCTCAAGGACTACCCGTTCCGCGG
CCTGCTCCTATGGGGCCAGCTGCTGGCCTGCCTGTCCGGGATGATCGACCTGGTGCTGGTCACCAGGCTGAACCTGAGGA
TCGGCATGGCGGACTACCTCTTCGCTGTGATGGACAACAGCGTCTCCCAGCTGATCGGCCAGCTGAAATGGCTGCCGCTC
CTCGTGCTCTGCTCCAAGCTCTGCCCCGTGGGCATCGAGGGCACCTTCTTCGCGCTGCTCATGTCCATCCAGAACCTCGG
CCTGCTCATGTCCGCCTGGTGGGGCGGCCTCCTGCTGCACGCGCTGGGCGTGTCTCGGACCGAGTTCGGGAACCTCTGGG
TGGCCGTGCTGGCGAGGAACGCCATGCGGCTGCTCCCGCTGGCGTTCCTGTTCCTGGTGCCTCGGAGCGACCAGAGCTCG
ACCATCCTTCCCGCGGAGATGCTGCTTGCGGATGGAGGTTCCGCGGGACATGTGGAACCAGGGTCGTCAGGTGTCATCGA
GTTTTCTGTCCTCCATGGAAATGAAAATGGTGAAGTTGTTGAGACTGAGGAAGAGGAACTAGAGCTGACCCCACTCATGG
AGAAGATTTGA---------------------------------------------------------------------
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----------------
>chr2B_1_TraesCS2B01G516400
GGGCAACCAAACACGCCCTAGATGGTGGAGGCTAGGGTTTAAAAAGAGGTAGATGTGATCTATGTTGTCGCCGCCCTTGC
CTTGGAGGGCAAGAAGGTCAGGCCCGACTAAGTCTCCACCAACTGGCTGAAGAACGCCGCCACAAGACGAAGCTGGACCC
CCGCAGCCCACCACCATTCCCCGAGCCTCGCCATCGGACGCCTAGATGTGCATGGCCCGGGACACCGCTGGCTGCCACCA
GACCCTACCGCCCGCAGAGCACGCGGGAGGGGGGGGTGAGAAAGGGACTGAGCTTCAGTGACGTAACTACACCTGCAGTT
GGGTCAGTGACATGGACATTGTGAAACTAATAGATGGCTGACCCACATGTCACTGACCCAACTGCAGGTGCAATTAAGGC
ACCGAAGCAGCATCCGTGAGAGAGAGCTCCGTTGCCGTCGTCGGCCACATGGGCTTCGCCCGACGGCATCTTCCGGCTGC
GGCGGCGGCGGCGGGTGGGGAAGGGATGAAGGGCGACGCAGCCTAGGGTTTGAGGGAGTCGCCCTCAGGTCGCCCTGGGC
AGGAGTTATCGATGGGTAGAAATTGATAGTATGTTC--------CGACTATGTTTGTGTAGTCCTTTCTTTGACATTGTA
TATCATATTCTCTCCTAATTATAAATCGCATGCAGCGGTTGGATTAAAAAAAA-ATGCTCTGTAGGTGATGAAGACAATT
GTAACAGTACACGTCATCTTTCTCT-AAAAAACAGTAGTACACGTGACGACGTCGAAGCCTGAACCAACTGATGCATATT
CTATACTTCCACCACCTAAAGCTTTTGT---ATTAAGACAAATGAAGTCAAACACTGAGCACAGATCAAGAAACGCCA--
-TCCTGATCCGTGCATTGTACCTGTGCATCCTCTCTGAGCAAGCAATGGCCGGGACCTTCATTCTTTCGGTGCAAATCAT
GGTGGTTTCTCCATAGATTCCAAGAAACCACACAGGAAAGGAATCACTCTGTTCGGAT------GGAGCAGCTCCAAGAA
ACACCGCACGGAGATGGAAATCTCAAGGCCGCCCCAGATCCCGGACTCGGAGGCGGCAATGGCGGCTGCATCGCTCCCAA
TGGCACCCTCCCCTGCGGCTGGCTCGGTCGTCTGTCCCGCGAGCTGCATTGGAGCTTCGTGCTCGCCGTCGTCGCCGTCT
ACGGCGCCTGCCAGGGCGTCGGCTCCTCATTCGGCAGCGTCGCCGCGGGGTACTACTGGAAGGACGTGCAGCGCGTGCAG
CCGGCCGCCTCGCAGTTCTACCAGGGCGTCGTCAACGTGCCCTGGGTCGTCAAGCCCCTGTGGGGCCTCTTCACCGACGT
CGTCCCCGTCGCCGGCTACCGCCGCCGCCCGTACCTCCTCCTCGCAGGTGAGCCAATGCTTTGCTTGCT-ACGGTCAACG
TCGTTCTGAATCTGCTCGCCTTCTTAAGCTGCTGTCTTGATCCATGTATTGTAACCAACTATGTAAAGGCGTCATGGGCG
TGTCGTCCATGCTCACGCTTGCTCTGCGCCGCACGCCGGCGATCGCACCGGCATTGGTGGCGTTCACGACGCAGGCCGCG
GGCGCCGCCATAGCCGACGTGGTGGTGGACGCCATGGTCGCGCAGAACAGCATAAGCCACCCTCCGCTCGCCGCCGACAT
GCAGAGCATGTGCGGGTATTGCTCCTCCGCCGGCGCATTGGTGGGGTACTCCATCAGCGGCCTCGTCGTTCACGCAATAG
GTTCCCAGGTCTGAAGTCTGAACTGAACATTTCCTGAGAGAAGATGGATGGTATTGGTAGACATTCAACATACAGATTCC
AATGTTCTTGCCATGTCCATTTGATCTT----TTCAGGGGGCTCTTGGCTTGCTGAGCATCCCCTCCGTGCTCGTATTTT
CGGCCGGGATTCTTGTCAAGGAGGAGCGGGCCAAGGATTTCGAGTACAACCAGGTGAGCTCGAGCTTCAGAAGCTGCCAA
TTAAATACAGTTATGAACATGCATCA----CTCTCAAGGTTGTTAACTGCAATATAT-----TCAGGTTCACAAGAAGTT
CTACGAAGCAGTTGAATCAATGTGGTCAACATTGAAGTGCCCGCAAGTCTGGAGGCCGTGCGTTTACATGTTCTTAATGT
TCGTGCTAAGCCCG----GACATCCAAGGAGGGCTGTTCTACTGGTACACAGATTCGAGCACCGGACTCGCATTTTCCGA
GGTAG--------TT---TCTGCTAAAAAATGTTCTTCAGATGCATGCTAGAAGCTAGAATTACATAGACTACTAA---A
ACACACGACAAAGATCGAGAAGAACTGATGGATGGGATGGGACCTGCCATTTTTCTGCAGGGATTCAT--TGGTCTCATC
TACTC---GATAGGCTCAGTGGGCTCGCTGCTCGGCGTCCTGCTCTACCAGAACATGCTCAAGGACTACCCGTTCCGCGG
CCTGCTCCTATGGGGCCAGCTGCTGGCCTGCCTGTCCGGGATGATCGACCTGGTGCTGGTCACCAGGCTGAACCTGAGGA
TCGGCATGGCGGACTACCTCTTCGCTGTGATGGACAACAGCGTCTCCCAGCTGATCGGCCAGCTGAAATGGCTGCCGCTC
CTCGTGCTCTGCTCCAAGCTCTGCCCCGTGGGCATCGAGGGCACCTTCTTCGCGCTGCTCATGTCCATCCAGAACCTCGG
CCTGCTCATGTCCGCCTGGTGGGGCGGCCTCCTGCTGCACGCGCTGGGCGTGTCTCGGACCGAGTTCGGGAACCTCTGGG
TGGCCGTGCTGGCGAGGAACGCCATGCGGCTGCTCCCGCTGGCGTTCCTGTTCCTGGTGCCTCGGAGCGACCAGAGCTCG
ACCATCCTTCCCGCGGAGATGCTGCTTGCGGATGGAGGTTCCGCGGGACATGTGGAACCAGGGTCGTCAGGTGTCATCGA
GTTTTCTGTCCTCCATGGAAATGAAAATGGTGAAGTTGTTGAGACTGAGGAAGAGGAACTAGAGCTGACCCCACTCATGG
AGAAGATTTGACGACTGGAGAAGATGAAAGAGGTAATAGCACTGCAGGTCCCTGAACTTGTTATGGAGG-----------
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------------------------TGATGATTTGGTCCTCAAATTTGAAAAAGCGGATTATTTAGTCCTTGAACTTGTCA
TGAAGGTGCAAGTTTGGTCCTGTGCGAATCACAGCTCGCCAAGTGGAGCCAGCTGGGCTGGGCTGGTCAGTGCCGCACAT
TTTTGCAATCCCCCTGCCTTAAAGCCCTAATCAACCCGCACTACACCTCGTTTGCGTCAGTGACCTGCAGTGCTAACTCC
CGTTGAAACCAGCGACGAGGACACGGACTGGGAGGCTGCGCGGGATCTGCTTCAGGACGCCGTCCCGCCAAACTTTCCTC
GTTAA---------------------------------------------------------------------------
---------------TTATGGGTCCGATGGTGCGACTTTCTCCTTTTTCTACCATGCATGGGAGTTAATTCCTTCAAGTA
TTCTTTAGAGATCCATTCTAATCTCTGTTCGTTGACTCCTGAGTCTCCTAGTTGATATTCAAGCAACTTTTGAACGTATA
TAAATTGTTTAGATTCGATATGAGAACTCGAGGTGGGACTATTTAGTCATGGGACTACAATGTTTTTTTTATCTGAGGCC
AATAATATGAATGTAATCCAATAACAGCACGGCGGTCAGGAGCCCAATAACAAAAAACATAGTCATTATTATTCTGGACA
AGCGTGCGCAAAAAATGTCCTAGAACAGTGCTGTTAAATCAAGAGCTAACTCTTCAAAGATCTAGAGGCACTCGAGAGAG
TCATAAGAGTTTGATTCATTTATTCTCTACTAATATCGCCTTGTTGGAACAATGTCGTAGAAGACATGGACAACGCAAAC
AGAAGAGAGCATGTGGTCTCCTTATTTATTTCCATCCGTTTCATTTTGTGTTCTAAATAGAGCTTACATAAATGTGTAAA
GTCAACCAAAAACCTATTTCAATTGTCTAAGGACGAATGGATGAGAATCAATCCTAGATGAGGCGTATGCTTTTGTGACA
GGCATGGTATTCCTAA
>chr2A_573
TGGTGT--------------------------------------------------------------------------
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-----------------AGAAATTGATAGTATGTTGTTTCTGTTCGACTATGTTTGTGTAGTCCTTTCTTTGGCATTGTA
TATCATATTCTCTCCTAATTA--AATCGCATGCGACGGGTGGAACACAAAATTTATGCTCTGTAGGTGATGAAGACAACT
GTAACAGTAGACGTGATCTTTCTCT-AAAAAACAGTAGTACACGTGACGACGTCGGAGCCTGAACCGGCCGGTGCATATT
CTATGC-TCCACCACCTAAAGCTTTTAA---ATCAAGACAAATAAAGTCAAATACTGAGCACAGATCAAGAAGCGCCA--
-TCCTGATCCGTGCATTGTACCTGAGCATCCTCTCTGAGCAAGCAACGGCCGGGACCTTCATTCTCCCGTTGCAAATCAT
GGTGTTTTCTCCATAGATTCCAAGAAACCACGCAGGAAAGGAATCGCTCTGTTCAGAT------GGAGCGGCTCCAAGAA
ACACCCCACGGAGATGGGAATCTCAAGGCCGCCCCAGATCCCGGACACGGAGGCGGCAATGGCGGCTGCATCGCTCCCAG
TGGCACCCTCCCCTGCGGCTGGCTCGGCCGCCTGTCCCGCGAGCTGCATTGGAGCTTCGTGCTCGCCGTCGTCGCCGTCT
ACGGCGCCTGCCAGGGCGTCGGCTCCTCATTCGGCAGCGTCGCCGCGGGGTACTACTGGAAGGACGTGCAGCGCGTGCAG
CCGGCCGCCTCGCAGTTCTACCAGGGCGTCGTCAACGTTCCCTGGGTCGTCAAGCCCCTCTGGGGCCTCTTCACCGACGT
CGTCCCCGTCGCCGGCTACCGCCGCCGCCCGTACCTCCTCCTCGCAGGTGAGCCAATGCTTTGCTTGCT-ATGGTCAACG
TCGTTCTGAATCTGCTCGCCTTCTTAAA---CTGTCTTGATCCATGTATTGTAACCAACTATGTAAAGGCGTCATGGGCG
TGTCATCCATGCTCACGCTTGCTCTGCGCCGCACGCCGGCGATCGCACCGGCATTGGTGGCGTTCACGACGCAGGCCGCG
GGCGCCGCCATAGCCGACGTGGTGGTGGACGCCATGGTCGCGCAGAACAGCATAAGCCACCCTCCGCTCGCCGCCGACAT
GCAGAGCCTGTGCGGGTATTGCTCCTCCGCCGGCGCATTGGTGGGGTACTCCATCAGCGGTCTCGTCGTCCATGCAATAG
GTTCCCAGGTCTGAAGTCTGAACTGAACATTTCCTGAGAGAAGATGGATGGTATTGGT---------------AGATTCC
AATGTTCTTGCCATGTTCATTTGATCTT----TTCAGGGGGCTCTTGGCTTGCTGAGCATCCCCTCCGTGCTCGTATTTT
CGGCCGGGATTCTCGTCAAGGAGGACCGGGCCAAGGATTTCGAGTACAACCAGGTGAGCTCAGGCTTCAGAAGCTGCCAA
TTAAATACAGTTACAAACATGA--CA----CTTTCAAGGTTGTTAACTGCAATATAT-----TCAGGTTCACAGGAAGTT
CTACGAAGCAGTTGAATCAATGTGGGCAACATTGAAGTGCCCGCAGGTCTGGAGGCCGTGTGTTTACATGTTCTTAATGT
TCGTGCTAAGCCCG----GACATCCAAGGAGGGCTGTTCTACTGGTACACAGATTCGAGTACCGGACTCGCATTTTCCGA
GGTAG--------TT---TCTGCCACAAAAGTTCTTCA------------GATG--------------------------
---CATGGCAAAGATCGACAAGAACTGATGTGGGCTTCCATAA----------TCTGCAGGGATTCAT--TGGTCTCATC
TACTC---GATAGGCTCAGTCGGGTCGCTGCTCGGCGTCCTGCTCTACCAGAACATGCTCAAGGACTACCCGTTCCGCGG
CCTGCTGCTATGGGGCCAGCTGCTGGCCTGCCTGTCCGGGATGATCGACCTGGTGCTGGTCACCAGGCTGAACCTGAGGC
TCGGCATGCCGGACTACCTCTTCGCCGTGATGGACAACGGCGTGTCCCAGCTGATCGGCCAGCTGAAATGGCTGCCGCTC
CTCGTGCTCTGCTCCAAGCTCTGCCCCGTGGGGATCGAGGGCACCTTCTTCGCCCTGCTCATGTCCATCCAGAACCTCGG
CCTGCTCATGTCCGCCTGGTGGGGCGGCCTCCTGCTGCACGCGCTGGGCGTGACGCGGACCGAGTTCGGGAACCTCTGGG
TGGCCGTGCTGGCGAGGAACGCCATGCGGCTGCTCCCGCTGGCGTTCCTGTTTCTGGTGCCTCGGAGCGACCAGAACTCG
ACCATCCTTCCCGCGGAGATGCTGCTTGCGGACGGAGGTTCCCCGGGGGATGTGGAACCAGGGGCGTCAGGTGCCATCGA
GTTTTCTGTCCTCCATGGAGATGAACATACTGAATTTGTTGAGACTGAGGAAGAGGAACTAGAGCTGACCCCGCTCATGG
AGAAGATCTGACGACT----------------------------------------------------------------
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>chr2D_634
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-ATCATATTCTCTCCTAATTATAAATCGCATGCAACGGTTTGAAAACAAAATTTATGCTCTGTAGGTGATGAAGACAACT
GTAACAGTACACGTGATCTTTCTCTAAAAAAACAGTAGTGCACGTGACGACGTCGAAGCCTGAAC--------GCATATT
CTACAC-TCCACCACCTAAAGCTTTTATTAAATTAAGACAAATGAAGTCAAACACTGAGCACAGATCAAGAAACGCCATC
CTCCTGATCCGTGCATTGTACCTGAGCATCCTCTCAGAGCAAGCAATGGCGGGGACCTTCATTCTTTCGGTGCAAATCAT
GGTGGTTTCTCAATAGATTCCAAGAAACCACACAGGAAAAGAATCACTCTGTTCAGATGGAGCAGGAGCAGCTCCAAGAA
ACACCCCACGGAGATGGAAATCTCAAGGCCGCCCCAGATCCCGGATACGGAGGCGGCAATGGCGGCTGCATCGCCCCCAA
TGGCACCCTCCCCTGCGGCTGGCTCGGCCGCCTGTCCCGCGAGCTGCATTGGAGCTTCGTGCTCGCCGTCGTCGCCGTCT
ACGGCGCCTGCCAGGGCGTCGGCTCCTCATTCGGCAGCGTCGCCGCGGGGTACTACTGGAAGGACGTGCAGCGCGTGCAG
CCGGCCGCCTCGCAGTTCTACCAGGGCGTCGTCAACGTGCCCTGGGTCGTCAAGCCCCTCTGGGGCCTATTCACCGACGT
CGTCCCCGTCGCCGGCTACCGCCGCCGCCCGTACCTCCTCCTCGCAGGTGAGCCAAGCCAATGCTTTGCCATGGTCAACG
TCGTTCTGAATCTGCTCGCCTTCTTAAA---CTGTCCTGATCCATGTATTGTAACCAACTATGTAAAGGCGTCATGGGCG
TGTCGTCCATGCTCACGCTTGCTCTGCGCCGCACGCCGGCGATCGTGCCGGCATTGGTGGCGTTCACGACGCAGGCCGCG
GGCGCCGCCATAGCCGACGTGGTGGTGGACGCCATGGTCGCGCAGAACAGCATAAGCCACCCTCCGCTCGCCGCCGACAT
GCAGAGCCTGTGCGGGTATTGCTCCTCCGCCGGCGCATTGGTGGGGTACTCCATCAGCGGCCTCGTCGTCCACGCAATAG
GTTCCCAGGTCTGAAGTCTGAACTGAACATTTCCTGAGAGAAGATGGATGGTATTGGT---------------AGATTCC
AATGTTCTTGCCATGTTCATTTGATCTT----TTCAGGGGGCTCTTGGCTTGCTGAGCATCCCCTCCGTGCTCGTATTTT
CGGCCGGGATTCTTGTGAAGGAGGAGCGGGCCAAGGATTTCGAGTACAACCAGGTGAGCTGAAGCTTCAGAAGCTGCTAA
TTAAATACAGTTACAAACATGA--CA----CTTTCAAGGTTGTTAACTG--ATACAT-----TCAGGTTCATAAGAAGTT
CTACGAAGCAGTTGAGTCAATGTGGGCAACATTGAAGTGCCCGCAAGTCTGGAGGCCGTGCGTTTACATGTTCTTAATGT
TCGTGCTAAGCCCG----GACATCCAAGGAGGGCTGTTCTACTGGTACACAGATTCGAGCACCGGACTCGCATTTTCCGA
GGTACTCAGTTTCTT---TCTGCTACAAAAGTTCTTCA------------GATG--------------------------
---CATGGCAAAGATCGACAAAAACTGATGGGGCCTTCCATAA----------TCTGCAGGGGTTCAT--CGGTCTCATC
TATTC---GATAGGCTCAGTCGGCTCGCTGCTCGGCGTCCTGCTCTACCAGAACATGCTCAAGGACTACCCGTTCCGCGG
CCTGCTCCTATGGGGCCAGCTGCTGGCCTGCCTGTCCGGGATGATCGACCTGGTGCTGGTCACCAGGCTGAACCTGAGGC
TCGGCATGCCGGACTACCTCTTCGCCGTGATGGACAACAGCGTGTCCCAGCTGATCGGCCAGCTGAAATGGCTGCCGCTA
CTCGTGCTCTGCTCCAAGCTCTGCCCCGTGGGCATCGAGGGCACCTTCTTCGCGCTGCTCATGTCCATCCAGAACCTCGG
CCTGCTCATGTCCGCCTGGTGGGGCGGCCTCCTGCTGCACGCGCTGGGCGTGACGCGGACCGAGTTCGGGAACCTCTGGG
TGGCCGTGCTGGCGAGGAACGCCATGCGGCTGCTCCCGCTGGCGTTCCTGTTCCTGGTGCCTCGGAGCGACCAGAACTCG
ACCATCCTTCCCGCGGAGATGCTGCCTGGGGATGGAGGTTCCGCGGGAGATGTGGGACAAGGGTCGTCAGGTGTCATCGA
GTTTTCTGTCCTCCGTGGAGATGAAAATGGTGAAGTCGTTGAGGCTGAGGAAGAAGAACTAGAGCTGACCCCGCTCATGG
AGAAGATCTGACGACT----------------------------------------------------------------
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>chr4D_1835
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-----------------CATTTGATCTTTCCATTCAGGGGGCTCTCGGCTTGTTGATCGTACACTCCATAATCGTATTTT
CGGCTGGGATTCTTGTGAAGGAGGAGCAA-CCAAGGATTTTGAGTACAACCAGGTGAGCTCAAGCTTCAGAAGATGGCAC
----ATACAGTTATGAACATGGATGGATGTCTCTCAAGATTGTTACTGT--ATATATTCAGGTCAGGTTCATAAGAAGTT
CTGTGAGGCAGTTGAATCAATGTGGGCAACATTGAAGTGCACACAAGTCTGGAGGCCGTGTGTTTACATGTTCCCGTGCT
TCATGATGAGCCCTGACAGACATCCAAGGAAGGTTGTTCTTCTAGAACAGATATTCGAGCTCTGGACTAGCATTTTCAGA
GGTAG--------TTCCTTCTGCTAAAAAAGTTCTTTG------------GATGCTAGTATTACATAGACTAGATCAGGA
AAACATGACAAAGATCGACAAGAACTGAACTGATGGATGGGACCATGCATTTCTTTTCTGTGTAGATTCATGGTCTCATC
TATTGTTTGATAGGTTCAGTCGGTTCGCTGCTCG-CGTCCTGCTGTACCAAAACTTGCTCAAGGACTACCCGTTCCACGA
CCTACACCTATGGAGCCAGTTGTTGGCCTGTCTATCTGGGATGATCGACCTGGTGCTGGTCACCAGGCTGAACCTCAAGA
TGGGCATACCAGATTACTTTTTCAACATGATCGGTAACAGCGTCTCCCAGCTGTTCGGGCAGCTGAAATGGCTGCCGCTC
CTCGTGCTCTGCTCGAAGCTCTGCCCTGTGGGCATCGAGGGCACCTT-TTCGCCCTGCTCATGTCCATCCAGAACCTCGG
TCTGCTCATGTCC-------------------------------------------------------------------
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>chr6B_3011
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-----------------------------GAGGTAATAGCACTGCAGGTCCTTGAACTTGTCATGGAGG-----------
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------------------------TGATGGTTTGGTCCTTAAACTTGAAAAGGCTGATTATTTGGTCCTTGAACTTGTCA
TAGAGGTGCAAGTTTGGTCCTAGGCGAATCACAGCTCGCCAAGTGGAGCCAGCTGGGCTGGGCTGGTCAGCGCCGCACAT
TTTGCAATTCCCCCCTGCCTTAAGCCCTAATCAACCCGCACTACACCTCGTTCGAGTCAGGGACCTGCAGTACCGGAGTC
GGATCGATCGTGTTTGATTGTTTTGTTTAGGAAA-----------------------------------AAACTTTCCTC
GTTAAACATAATGTAATTTACTGTAGTTGTTAATATTGCCGATGGCACTAGCTTATTGTCGATGGGTCAAACGTGTTCCC
ATACATGAGAGTTAATTATGGATACGACGGTGCAACTTTCTCCTTTTTCTACCATGCATGGGAGTTAGTTCCTTCCAGTA
TTCTTTAGAGATCCATTCTAATCTCTGTTCGTTGACTCCTGAGTCTCCTAGTTGATATTCAAGCAACTTTTGAACGTATA
TAAATTGTTTAGATTCGATATGAGAACTCGAGGAT----TATTTAGTCACGGGACTACAATG--TTTTTTATCTGAGCCC
AATAATATGAATGTGATCCAATAACAGCACGTCGGTCAAGAACCCAATAACAAAA-ACATAGTCACTATTATTCTGGACA
AGCGTGTGCAAGAAATGTCCTAGAACAGTGTTGTTAAATCAAGAGCTAACTCTTCAAAGATCTAGAGGCACTCGAGAGAG
TCTTAAGAGTTTGATTCATTTATTCTCTACTAATATCACCTTGTTGGAACAATGTCATAGAAGACATGGACAACACAAAC
AGAAGAGAGAATGTGATCTCCTTATTTATTTCCAACCGTTTCATTTTGTGTTCTAAATAGAGCTTACATAAATGTGTAAA
GTCAACCAAAAACCTATTTCAATTGTCTAAGGACGAATGGATGAGAATCAATCCTAGATGAGGCGTATGCCTTTGTGACA
GGCATGGTATTCCTAA
>chr6B_3011
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-----------------------------GAGGTAATAGCACTGCAGGTCCTTGAACTTGTCATGGAGGTGATGGTTTGG
TCCTTAAACTTGAAAAGGCTGATTATTTGGTCCTTGAACTTGTCATAGAGGTGCAAGTTTGGTCCTAGGCGAATCACAGC
TCGCCAAGTGGAGCCAGCTGGGCTGGGCTGGTCAGCGCCGCACATTTTGCAATTCCCCCCTGCCTTAAGCCCTAATCAAC
CCGCACTACACCTCGTTCGAGTCAGGGACCTGCAGTACCGGAGTCGGATCGATCGTGTTTGATTGTTTTGTTTAGGAAAA
AACTTTCCTCGTTAAACATAATGTAATTTACTGTAGTTGTTAATATTGCCGATGGCACTAGCTTATTGTCGATGGGTCAA
ACGTGTTCCCATACATGAGAGTTAATTATGGATACGACGGTGCAACTTTCTCCTTTTTCTACCATGCATGGGAGTTAGTT
CCTTCCAGTATTCTTTAGAGATCCATTCTAATCTCTGTTCGTTGACTCCTGAGTCTCCTAGTTGATATTCAAGCAACTTT
TGAACGTATATAAATTGTTTAGATTCGATATGAGAACTCGAGGATTATTTAGTCACGGGACTACAATGTTTTTTATCTGA
GCCCAATAATATGAATGTGATCCAATAACAGCACGTCGGTCAAGAACCCAATAACAAAAACATAGTCACTATTATTCTGG
ACAAGCGTGTGCAAGAAATGTCCTAGAACAGTGTTGTTAAATCAAGAGCTAACTCTTCAAAGATCTAGAGGCACTCGAGA
GAGTCTTAAGAGTTTGATTCATTTATTCTCTACTAATATCACCTTGTTGGAACAATGTCATAGAAGACATGGACAACACA
AACAGAAGAGAGAATGTGATCTCCTTATTTATTTCCAACCGTTTCATTTTGTGTTCTAAATAGAGCTTACATAAATGTGT
AAAGTCAACCAAAAACCTATTTCAATTGTCTAAGGACGAATGGATGAGAATCAATCCTAGATGAGGCGTATGCCTTTGTG
ACAGGCATGGTATTCCTAAGTTGGAAATTTAAGAACAATACGTCAAACTAAAGAATCCAAGACAAAATATAGCAACGATG
TCAGAAATTATTTGTGCATTTTTTTCTTCACACGTGCGTGTGTTCATAAAAAGGCGCATTCCTTTTTCTAGGAAGTCACA
TACACATTACTATTTTAACAACACGGCTAATTCTTTTTATTCACGGTGACTGGCAAGGTCTAGAATAAAAATGAATAATG
GTTAATTTAATATCTGAGAAAGCGGGTTTTCATAGCCGTGCATTAACATTTTCCCACAACCCTGCCATACAAGAGTGCGT
ACAGTGCATCATGTGATAAAATGGCTGGTACTCGGTTACTAAGTTTAATAAAATGATTGTGTGCATTATCAGCCGGGGCC
ATCCCCTTTTTAGTAAAAGAAGAAAAAAAACATACAGTGTAGGTGCTTGGAAAAACTACCAAGTTTGCTTTACTTTGCTT
ACACTGTGCTAAATAATTAACCAATTTAGGCACATGCACAATTATCAGCACCGGGCATGATCCGACAATGCTACAAAAGT
TAGAAAGTTATGCACATGCATAACTATCAGCGTCATCGTCACCCCTGGCCGTCCTTAATTTGGTTCTTCTTTCAATCAAC
TAACTCATAAGTTCTTTCATCGTTGCATTCGTCGGCATATGTCATCTCTCTAATTACCTTGGTTGCTTCTTTTGCTGGGC
GAACCTTTCCGCTAATCCGAAGAAAAGAAACTCGGCTTTATCCTTGTTCATGAGTTGACCGGGACTGATCTAAACACATT
TTGTGGTATTGTAGTTGAGTACTTTACGACGGTTTTTTTGTGTGTGTGGCTTTAGGGTAAATATAATCTATGCATGTACG
TAAACCATCTCTGGCGTAGCCGCGTAGGCACGTGAAAAAAAGCCTGCCCGCTGCTACCCAGCTCCAGAGTCCAGACTGCC
CATTTCCATTTTTGTGCAAGGTCCATCGTCGCTGATCACCAAGCATGCATGGACTGCGGCTGGTTTCAACATGAGGTAAT
AGCAGTGCAAGCGCGAACGAGGTGTAGTGCGGGTAGATTAAGGCTGAAGGCAGGGGGGAAATTGCAAAATGTGTGGCGCT
GCCCACCTGGCTCCACTTGGCGAGCTGTGATTCGCCCAGGACTAAACTTGCACCTGCATGACAAGTTCAAGGACCAAATA
ATCTGCTTTTTCAAGTTTGAGGACTAAACCATCACCTTCATGACAAGTTCAGGACCTGCAGTGCTATTACCTCCTGCATT
AGCAATGCATATGGCTCCTCCATGTTTAAAGGAGGCAAGCCAGACTTCTATCTTAATGCCCGGGGGGAGAGCACACCAGA
GAGGTTTTGGCGCAGCGTTCAACTTGCTGCTTTTATTGTTCCCCTTTTATTCTGAATCACAGATGAACATAACAGATCTG
CACAATCCGCGAGCTGAGAACACAACGAAAAAACGGCTGGATTTCTTATTAAACTCAGGAGAAAAACCTCAAACAGTTCA
ACTGACGAAACCGGAAGTGTAGATGGCTTTATTCGACACAGGTAGTCCATATACTATTGGATGAAACAGCTAGCGGACGA
TGGATTGCTAATTTGGTACTTTGAGAGGCTCATTGATAACTGCATTCACTAGGCTGTTCAATGAAGTTGGCGAGCTAAAT
CCATCTGTCTCGCGGTAGTACACGAAGTTAGTCTGGCATATGTTCCAGAACCGCTTTTTGAATGTTCTCGGAACGACGCT
TCCTTTCCTAAAAACCAATTTTTGCAGATCTTTCCTGCAAGTATCTATGGACTTGTGCACCACACCTAGGGCGTCTTCTA
TAGACATAGAACCACCACTGTGAAGAATAAGCAGATGGACTATGTTCAGTTTGCCTTCGCTGCCCTCCCTCTGCAGAAGT
AGATGAATAATGTTGTAAATTGTAATACCCTTCAAATGTAATTTCCGTCACACTCAATGTCCCTTTATATATACTAAAAT
ACATACAAATATATAGAAAAATGCTTTTGTGCACCTGGGAGTATGTGCTCCCACGTTTAATGTAACACAAAATTGAATCG
ATTGTACACCTGGGATGGGATTATGTACCCCCACTCTTAAATAGACATATTTGTAATGCACCTTCCTTGTTATATTTTGC
ATTTATATTTCGTACTAAAATTAAAAACAAAGTTAATCAATTTGCAGGTTATGCTAGTATAAATCCAGAGTTCTCAATCC
CATAGGCAGTAAAATTATATACACTAAGGTTGTGATGCTGAAAAATCTTATACTTGAATTGAGTAAAAAATAATTTCATA
TTAATACAGGTGATTTAATTATATGCTGAAAGCATCCATATTTTTGTCAGCTATGTAAAAATCTTTTAGGAATATTGACA
TATTTTGTCGTAAAGTCTGCAAATACCTCAAAACTTTGACTGTCATTCAGGAGACGGCCACAAGTGCTCATTAGCCGATA
TAACTCATTGTATTCGTGATCTTTGACAACAGTAGCCTTGAGATTTTCTCGCAAAAAATATAATGTTGGGAACAGAATGG
GGCCCATAAGATAAGAAGGAACTGCATTTTTCATGTACTCTTCAATTGTTGGCACATATTGGCTCCTCTGCCATACTGCC
TCGGTCATCGTACCCCTCATTGCATGTAACCACTGTAGATGAACTTGAACTTGTCANNNNNNNNNNAAAAGAAACTTGAA
AAAGAAAAGGTAACAAAAAAGGAAAAATGAAAAAGAAACAGAAAACGAAAAAACAATCAGGAAAGTGAAAAAAAAAGTGG
AAAACCAATAAAAGAAAAAAAACGGTTCATGGAACCTTCTAGAAGGTTCATAAAACCGGAGTGGGCAGTTTGTATGCTAC
GTACGTAAGTGGGCCGGCCCAAAAGCATCGTTCGGTCGCTTGCTGTGTGCGAAGCGCCGGCAGTTTGCCGCAACGAGCGG
CCAATAGGATTTTCCCGTTATGTTTGCCAAGAAAAGAAAAGAATAAATAGAGGGAAGAGCAACGTTATTGTCCCAGCCTG
TACTGGATGACGTTGCTATGCTGAACAAGCCATCAGGTAATCAAATCCAAGCTAGCTACATTAGGAGGTAATAGCACTGC
AGGTCCTTGAACTTGTCATGGAGGTGATGGTTTGGTCCTTAAACTTGAAAAGGCTGATTATTTGGTCCTTGAACTTGTCA
TAGAGGTGCAAGTTTGGTCCTAGGCGAATCACAGCTCGCCAAGTGGAGCCAGCTGGGCTGGGCTGGTCAGCGCCGCACAT
TTTGCAATTCCCCCCTGCCTTAAGCCCTAATCAACCCGCACTACACCTCGTTCGAGTCAGGGACCTGCAGTACCGGAGTC
GGATCGATCGTGTTTGATTGTTTTGTTTAGGAAA-----------------------------------AAACTTTCCTC
GTTAAACATAATGTAATTTACTGTAGTTGTTAATATTGCCGATGGCACTAGCTTATTGTCGATGGGTCAAACGTGTTCCC
ATACATGAGAGTTAATTATGGATACGACGGTGCAACTTTCTCCTTTTTCTACCATGCATGGGAGTTAGTTCCTTCCAGTA
TTCTTTAGAGATCCATTCTAATCTCTGTTCGTTGACTCCTGAGTCTCCTAGTTGATATTCAAGCAACTTTTGAACGTATA
TAAATTGTTTAGATTCGATATGAGAACTCGAGGAT----TATTTAGTCACGGGACTACAATG--TTTTTTATCTGAGCCC
AATAATATGAATGTGATCCAATAACAGCACGTCGGTCAAGAACCCAATAACAAAA-ACATAGTCACTATTATTCTGGACA
AGCGTGTGCAAGAAATGTCCTAGAACAGTGTTGTTAAATCAAGAGCTAACTCTTCAAAGATCTAGAGGCACTCGAGAGAG
TCTTAAGAGTTTGATTCATTTATTCTCTACTAATATCACCTTGTTGGAACAATGTCATAGAAGACATGGACAACACAAAC
AGAAGAGAGAATGTGATCTCCTTATTTATTTCCAACCGTTTCATTTTGTGTTCTAAATAGAGCTTACATAAATGTGTAAA
GTCAACCAAAAACCTATTTCAATTGTCTAAGGACGAATGGATGAGAATCAATCCTAGATGAGGCGTATGCCTTTGTGACA
GGCATGGTATTCCTAA
>chr2D_3403
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------------------------------------------------------------------AATTCCTTCCAGTA
TCCTTTAGAGATCCATTCTAATCTCTGTTTGTTGACTCCTGAGTCTCCTAGTTGATATTCAAGCAACTTTTGAACGTATA
TAAATTGTTTAGATTCGATATGAGAACTCGAGGTGGGACTATTTAGTCACGGGACTATAATG-TTTTTTTATCTGAGCCC
AATAATATGAATGTAATCCAATAACAGCACGGCGGTCAGGAGCCCAATAACAAAACCG-TAGTCATTATTATTCTGGACA
AGCGTGCGCAAGAAATGTCCTAGAACAGTGTTGTTAAATCAAGAGCTAACTCTTCAAAGATCTAGAGGCACTCGAGAGAG
TCTTAAGAGCTTGATTCATTTATTCTCTACTAATATCACCTTGTTGGAACAATGTCGTAGAAGACATGGACAACGCAAAC
AGAGGAGAGCATGTGGTCTCCTTATTTATTTCCAACCGTTTCATTTTGTGTTCTAAATAGAGCTTACATAAATGTGTAAA
GTCAACCAAAAACCTATTTCAATTGTCTAAGGACGAATGGATGAGAATCAATCCTAGATGAGGCGTATGCTTTTGTGACA
GGCATGGTATTCCTAA
>SNPs
S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS------------------S------------------------------------S-------
----------------------------------S--------SS-S----SS-------------------------S-
--------------S---------------------------------------------------SS-S-S--------
------S-------------------S-----------------------------------------------------
------------------------S-------------------------------------------------------
------------------------------------------------------S-------------------------
-----S----------------------------------------S---------------------------------
---------------------------S--S-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------------------------------------------------------------S--------
---------------------------SSSS-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-------------------------------------------------------------S----------
----------------------------------------------------------SSSSSSSSSSSSSSS-------
----------------S---------------------------------------------------------------
-------------------------------------------------------------S------------------
---------------------S----------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------SS-SS--SSSSSSSSSSSSS--S-----S-------------SSSS----
-S---S------------S------------SS-----------SSS-----S---------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------S----------------S------------------------------------------------------
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----------------------------------------------------S-S-------------------------
---------------------------------------------------------------------------S----
------------------------------------------------S-------------------------------
-------------------S----------------------------------------------------S-------
-------S--------SSSSSSSSSSSSS----------------------S---------S------------------
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-----------------------------S---------S---S-------S--S--------S----------------
-SS------------------SS-----------------------------------------------S---------
---SSS-S------SSS-S-S-------------------------------S-S-----S----------S-SSSSSS-
S-S-SS-S-SS-SSSSSSS-SSSS-SSSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--------------------------------------------------------------------------------
---------------------S-S---S-----S-----------------------------------------S----
--------------------------------------------------------------------------------
-------------------------------------------------S------------S--------------S--
-------------------------------------------------------S------------------------
-----------S------------------S-------------------------------------------------
--S----------------------------------S------------------------------------------
----------------------------------S---------------------------------------------
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>forward_429
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---------GCATCCGTGAGAGAGAGCTC---------------------------------------------------
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>reverse_1688
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-------ATGTGCGGGTATTGCTCCTC-----------------------------------------------------
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>forward_576
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----------------------------------------------------------------------------GGGC
AGGAGTTATCGATGGG----------------------------------------------------------------
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>reverse_2586
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-------------------------TGTGATGGACAACAGCGTCT-----------------------------------
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>forward_2365
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-------------------------TGATGGATGGGATGGGACCT-----------------------------------
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>reverse_7381
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--------------------AAAGCCCTAATCAACCCGCA----------------------------------------
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----------------
