>input_sequence_39706
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATGGACGCCCTAGGCGGCGCGCTGCCGCGGCTCGCCC
TCGCCGACGCCGACGCCG------GGCCGGACGACGCGTGCGGGAGCCCCTGCTCCGTCGCCAGCGACTGCAGCAGCGTC
GCCTCCGCCGACTTCGAGGGCCTCTTCTCCCCCTCCGGCGCCGACGCGGCCCCGCCCTCGCTCCTCTCCGACGACCTGCC
CGCGGCCGCCGCCGAGGCCGCGGCGGTCCCCGGCGGCGCCTGCAGGAGCGTCTTCGCCCTCGACTCCCCGCCGCTCTGGG
GGCTCGAGTCCGTCTGCGGCCGCCGCCCGGAGATGGAGGACGCCGCCGCCGTCGTCCCGCGATTCTACCGCGTCCCGCTC
TGGATGGTCGCCGGCGACGGCGCCGCGGTCGACGGCCTTGACCGCGCCTCCTTCCGCCTCCCCGCCCACTTCTTCGCCGT
CTACGACGGCCACGGCGGCGCCCAAGTCGCCGACTATTGCCGGGAGAAGCTCCACGCCGCGCTCGTCGAAGAGCTACGCG
CCGCAGAGGACCGTGTCGGCGGATGCGACGACCTGAGCTCCCTGGACTCCAAGAAACAGTGGGAGAAGGCATTCCTGGAC
TGCTTCTGCCGCGTCGACACCGAGGCCGAGGCGCCGGACAGCGCGGGGTCGACGGCGGTGACCGCGGTCCTTTGCTCGTC
CCACATCATCGTCTCCAACTGCGGGGACTCGCGGGCGGTGCTGTGCCGGGGCAAGGCGCCATTGCCGCTCTCTCTGGACC
ATAAGGCACTGTCATCA--TTCATCACATTT---------------------------GTTCTTGAGTTCATCAGATACA
CTGTCTGAATGTTGCATTTCCCTATTGTCGATTCAGCCCAACAGGGAAGACGAGTACGCGAGGATCGAGGCGCTGGGCGG
CAAGGTCATCCAGTGGAATGGATATCGAGTTCTCGGTGTTCTTGCCATGTCGCGCTCCATCGGTACGCA-----ATTTTC
TGCTCCTGAATATTTCAGAGCAAAGTTATGTAGGAGTACATACCTTAATTAGGAAATTGGCTATG---------------
---TATCTCGAATCTCATTGAGGTCAAGGTTTAACTTTAGGTAGCGAGTTTCTAGGAATTGTGTCATGGAAAATCTTTG-
---------------------CTCTGTTCTTGGAAAAAC--TGTTGGTGATATCTGAATTGTGATGCGTGGTTCGTGAAT
CTGTCTATTTTG-GCTGGCAAAAGTTTCATGACTTGTACTAATTTTTGACA-TTTGTCAAGTTAGTGATCATTTGCGTGA
TGAC----------------------------CTTAAATTTCTCCACCTAGCAAATACCTTTGAAAAGTTGGGTTATCAT
AGATAACAAATACT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACTCACACATCACAAACTGATGATTCCTACTAGCTGTATTCA--------------------TGCTTGCTAA
GGAATGGCTCATCTTCCCATGCTTGTATGTTCTGTCCCTCAACAAATTATTCAGTGACTGACTGAGTAGTTTGATAATAA
CCATGTTCACTGTAATCCTGTGCTCTGCTTTTCTTCTGAACTACTGAACTGGGTTCCTGGTTATGATCGTGTTGTTGATC
TACTTGAAGGGGACAGATACCTGAAACCGTACATAATCCCGGTCCCCGAGGTGACGGTTGTTGCCCGGGCGAGAGAGGAT
GAGTGCCTCATCCTCGCAAGCGATGGCCTCTGGGACGTGTTGTCGAACGAGGAGGTGTGCGACGCCGCTCGCAAGCGAAT
CCTACTGTGGCACAAGAAGAACGCTACCGCCTCCTCGTCCATCTCCCGAGGAGGAAGCGGCGGCGACGGTGGCTCGCCGG
ATCCCGCCGCTCAGGCGGCCGCCGAGTACCTATCCAAGCTCGCCCTCCAGAAGGGGAGCAAGGACAATATCACCGTCCTT
GTGGTCGACCTCAAGGCGCATAGGAAGTTCAGGAGCAAGACTGACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
GATAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G475700
AGAGGGCTCTGGAGGCGAACACGCGGTTGCTAGAGCTTGCACGACGGTAGCGGGGCCGTGGTCGATGTACGCCCGCTCTT
TCATTTTAAAATATGGACCTTGTTTCTTAACGATTGGAAAATGTAAAGAAAATATCATAATTCTTTTGTTAAGAAGCACA
GACATGATAAAAAGGTTCATGAATATAAAAATGCCCGTGAACTCAAAAAGTGTTCACAAAATTTTAAACTGTCCATGAAT
TTCAAAAAATGCCCATGAATTTGAATTTTTATGTATTCAAAAATGTTCATGGCTCTTAAAATTTCATTAATTTGAAAAAT
CATGAATTAAAAAGTGTGAATAAAGTTGAGAATTTTTTATGAATTGTTTTATAAATTTATGAATTTAAAAAATTCCACAG
TTTTTTTTGAAAACTATGACATATTCACGAAGTTTATGAGAAGTTAATATTATTTTACTGATATAAAGAAAAAGCAAGAA
AGAAAACACTACTCCCTCCAATCAAAAATAATTAACGCAGCTTCTATGCAACATTGTATAAAAATGTTGTATTGAGGCTG
CGTCAATTAATTCATAGAAAACACCCTCAAAAAATTAATTCATAGATAAATAATTTAAAAACCGGAAAGAAAACACAGGA
AAAAAAAAAACAAGGCCGGCCGCGTCCCGTGAAAGGCTGGCGGTGGGCGGTCGAGATGCGACCACGCGACCCGAGGCTGT
GAGCCGCCGGCCGGCCGTCCATCGGCATCGCCTTGCTTCGTCCCCAGGGCAGCTCCCGTGCCCATGCCCCCGCACCCACC
CACCACCAGCCACTCACTCCCTTCTCCCCCTTGCCTCCATCGCCATCCCCGTCTCCAGCTCCATCCATGACTACCCAG--
-CACCAGCACCAGCACCAGCAGCGCCAGTCCACCGCCGCCGCCTCCTCCTCCTCCTCCCCACTACCACCGCCATGGCCTA
CCCTTAGGCTTAGGCTTAGTCTTGGCCCCGCGCGCTCGTCGCCATGGACGCCCTAGGCGGCGCGCTGCCGCGGCTCGCCC
TCGCCGACGCCGACGCCG------GGCCGGACGACGCGTGCGGGAGCCCCTGCTCCGTCGCCAGCGACTGCAGCAGCGTC
GCCTCCGCCGACTTCGAGGGCCTCTTCTCCCCCTCCGGCGCCGACGCGGCCCCGCCCTCGCTCCTCTCCGACGACCTGCC
CGCGGCCGCCGCCGAGGCCGCGGCGGTCCCCGGCGGCGCCTGCAGGAGCGTCTTCGCCCTCGACTCCCCGCCGCTCTGGG
GGCTCGAGTCCGTCTGCGGCCGCCGCCCGGAGATGGAGGACGCCGCCGCCGTCGTCCCGCGATTCTACCGCGTCCCGCTC
TGGATGGTCGCCGGCGACGGCGCCGCGGTCGACGGCCTTGACCGCGCCTCCTTCCGCCTCCCCGCCCACTTCTTCGCCGT
CTACGACGGCCACGGCGGCGCCCAAGTCGCCGACTATTGCCGGGAGAAGCTCCACGCCGCGCTCGTCGAAGAGCTACGCG
CCGCAGAGGACCGTGTCGGCGGATGCGACGACCTGAGCTCCCTGGACTCCAAGAAACAGTGGGAGAAGGCATTCCTGGAC
TGCTTCTGCCGCGTCGACACCGAGGCCGAGGCGCCGGACAGCGCGGGGTCGACGGCGGTGACCGCGGTCCTTTGCTCGTC
CCACATCATCGTCTCCAACTGCGGGGACTCGCGGGCGGTGCTGTGCCGGGGCAAGGCGCCATTGCCGCTCTCTCTGGACC
ATAAGGCACTGTCATCA--TTCATCACATTT---------------------------GTTCTTGAGTTCATCAGATACA
CTGTCTGAATGTTGCATTTCCCTATTGTCGATTCAGCCCAACAGGGAAGACGAGTACGCGAGGATCGAGGCGCTGGGCGG
CAAGGTCATCCAGTGGAATGGATATCGAGTTCTCGGTGTTCTTGCCATGTCGCGCTCCATCGGTACGCA-----ATTTTC
TGCTCCTGAATATTTCAGAGCAAAGTTATGTAGGAGTACATACCTTAATTAGGAAATTGGCTATG---------------
---TATCTCGAATCTCATTGAGGTCAAGGTTTAACTTTAGGTAGCGAGTTTCTAGGAATTGTGTCATGGAAAATCTTTG-
---------------------CTCTGTTCTTGGAAAAAC--TGTTGGTGATATCTGAATTGTGATGCGTGGTTCGTGAAT
CTGTCTATTTTG-GCTGGCAAAAGTTTCATGACTTGTACTAATTTTTGACA-TTTGTCAAGTTAGTGATCATTTGCGTGA
TGAC----------------------------CTTAAATTTCTCCACCTAGCAAATACCTTTGAAAAGTTGGGTTATCAT
AGATAACAAATACT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACTCACACATCACAAACTGATGATTCCTACTAGCTGTATTCA--------------------TGCTTGCTAA
GGAATGGCTCATCTTCCCATGCTTGTATGTTCTGTCCCTCAACAAATTATTCAGTGACTGACTGAGTAGTTTGATAATAA
CCATGTTCACTGTAATCCTGTGCTCTGCTTTTCTTCTGAACTACTGAACTGGGTTCCTGGTTATGATCGTGTTGTTGATC
TACTTGAAGGGGACAGATACCTGAAACCGTACATAATCCCGGTCCCCGAGGTGACGGTTGTTGCCCGGGCGAGAGAGGAT
GAGTGCCTCATCCTCGCAAGCGATGGCCTCTGGGACGTGTTGTCGAACGAGGAGGTGTGCGACGCCGCTCGCAAGCGAAT
CCTACTGTGGCACAAGAAGAACGCTACCGCCTCCTCGTCCATCTCCCGAGGAGGAAGCGGCGGCGACGGTGGCTCGCCGG
ATCCCGCCGCTCAGGCGGCCGCCGAGTACCTATCCAAGCTCGCCCTCCAGAAGGGGAGCAAGGACAATATCACCGTCCTT
GTGGTCGACCTCAAGGCGCATAGGAAGTTCAGGAGCAAGACTGACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
GATAGTTATAAGCAACCTATA--GGAAGCTCAAGACCAAAACCTGATGACAGTGACAGTGCATATACAAATTATTTTTTG
TTTCAA--GTAGCTAGATTTGAAACATAAAAATCATATGCACAGATTTTCTTGGAAAAAAGTGCTTTTAGAATAATATAA
CTTTGTTGATCCTTGCACATATATATACTGCAGTAGAAACTACTCCCTCCGTTCCCAAATATTTGTCTTTCTAGGCATTT
CAAATGGACACAACATACGGATGTATGTAGATAATATTTTAGAGTGTAGATTCACTCATTTTTGCTCTGTATGTAGTCAC
TTATTGAAATCTCTAGAAAAACAAATATTTAGGAACGGAGGGAGTAGCAGTTAAGTTATATTTTGAAGACCCATGTCAAT
GTTCAAAATGTCACCTTTTCATGTCGTCCCCTTCGTCTCCGTGTCTTTCTCCGTCTTGTTCACCTCCTCCCCGGCACCGG
CATGTCGTCGACCTCGTCTCCCATGGAGGTAAGCACCTTACAACGACCCTCCCATCCTTCCATTGTTATTGTTAGGTTAC
TAGATAAGGAATTTCCATAACAAGCTCTCAATCGAAGGTGTCATCCCGAAACACCCCACTGACTATATTTTCAATTGGTT
TATTTTCTTGCAGTTGTGGTTGCCTCTAGGACAGTGGAAGGACAGTGCGATGACAAGCGCGGTGTTGAGCAACATTAAGT
TGATCCACT--ACACATCAACAGAAGGCAACCGTCAGACTAATCTTTGCTGGCCGCGTGCCTCAT---ATTGCTTTATGT
CTACACTTCTGCTAGATGAACGAGCCCTGGGTTGTAATATGTTGATACTTTTTTCGTTTATTTTGCTGTTAGAATCTCAT
GT----------------CTTTATTATTTT-AACGTTGGGCACGTTTTGCGTGTTTCTTCTAAAAGAAGTA---TTGGGT
TTATTAGATTCTTTCTCTTCAATCATATGTTCCCTTTTCCTGGAATGGATAGAGAATCCTCTCTGGCAAGGAAT
>chr1A_679
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GGCGGCGGGCGGTCGAGATGCGACCACGCGACCCGAGGCTGT
GAGCCGCCGGCCGGCCGTCCATCGGCATCGCCTTGCTTCGTCCCCAGGGCAGCTCCCGTGGCCATGCCCGCGCACCCACC
CACCTCCAACCACTCACTCCCTTCTCCCCCTTGCCTCCGTCGCCATCGCCGTCTCCAACTCCATCCATGACTACCCAG--
-CAG------------CAGCAGCTCCAGTCCACGGCCGCCTCCTCCTCCTCC------CCACTACCACCGCCATGGCCCT
CCCTTAGGCTTAGGCTTATTCTTGGACCCGCGCGCTCGTCGCCATGGACGCCCTAGGCGCCGCGCTGCCGCGGCTCGCCC
TCGCCGACGCCGACGCCGACGCCGGGCCGGACGACGCGTGCGGGAGCCCCTGCTCCGTCGCCAGCGACTGCAGCAGCGTC
GCCTCTGCCGACTTCGAGGGCCTCTTCTCCCCCTCCGGCGCCGACGCGGGCCCGCCCTCGCTCCTCTCCGACGACCTGCC
CGCGGCCGCCGCCGAGGCCGCCACGGTCCCCGGCGGCGCCTGCAGGAGCGTCTTCGCCCTCGACTCGCCGCCGCTCTGGG
GGCTCGAGTCTGTATGCGGCCGCCGCCCGGAGATGGAGGACGCCGCCGCCGTCGCCCCGCGATTCTACCGCGTCCCGCTC
TGGATGGTCGCCGGCGACGGCGCTGCGGTCGACGGCCTCGACCGCGCCTCCTTCCGCCTCCCCGCACACTTCTTCGCCGT
CTACGACGGCCACGGCGGTGCCCAGGTCGCCGACTACTGCCGGGACAAGCTCCACGCCACGCTTGTTGAAGAGCTGCGCG
CCGCAGAGGACCGTGTCGGCGGCTGCGACGACCTCAGCTCCCTGGACTCCAAGAAACAGTGGGAGAAGGCGTTCGTGGAC
TGCTTCTGCCGCGTGGACGCCGAGGTCGAGGCGCCGGACAGCGCGGGCTCGACGGCGGTGGCCGCAGTCGTCTGCTCGTC
CCACATCATCGTCTCCAACTGCGGGGACTCGCGGGCGGTGCTGTGCCGGGGCAAGGCGCCATTGCCACTCTCTTTAGACC
ATAAGGCAACATCACCATTTTCATCACATTTGCTCATTACCCCTGCAATTGCCTCTGAGTGCTTGAGTTCATCAGATACA
CTGTCTGAATGTTGCATTT----ATTCTCGATTCAGCCCAACAGGGAAGACGAGTACGCGAGGATCGAGGCGCTGGGCGG
CAAGGTCATCCAGTGGAATGGCTATCGAGTTCTCGGTGTTCTTGCCATGTCGCGCTCCATCGGTACGCAATTTTATTTTC
CGCTCCTGAATATTTCAGAGCAAAGTTATGTA----------------------------CTGTG---------------
---TACCTCCAATCTCATTGAGGTCAACGTTTAACTTTAGGTAGCGAGTTTCTAGTAACGTTGTCAAGGAAAATCCTTTG
CTCTGCACTGCACTAGTTCTTCTCTGTTCTTGGGAAAAT--TGTTGGTGATATCTGAATTTTTGACATAGTAATTGTTGG
TGATATCTGAATTGCTGGCAAAAGTTTCATGACTGATACTAATTTTTGACA-TA-GTAAAGTTAGTGATCATTTGTGTGA
TGGT----------------------------CTTTAAAAAAG--------------------------TGGGCTAGCAT
AGATAACAAATACT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GCTCACACATCACAAACTGATGATTA-CTAACACTGCACAAGTAGCAGGGTGTAGTCATGCTTGCTTACTAA
GGAATGGATCATATTCCCATGCTTGTATGGTCTTTCCCTCAACAAATTATTCAGTGACTGACTGAGTGATTTGA------
-----------------------------------CTGAACTTCTGAACTGGATTCCTGGTTATGATTGTGTTGTTGATC
TACTTGCAGGGGACAGATACCTGAAACCGTACATAATCCCGGTCCCTGAGGTGACGGTCGTTGCCCGCGCGAGAGAGGAT
GAGTGCCTCATCCTCGCAAGCGATGGCCTCTGGGACGTGTTGTCGAACGAGGAGGTGTGCGACGCCGCTCGCAAGCGAAT
CCTACTGTGGCACAAGAAGAACGCTACCGCCTCCTCGTCCATCTCCCGAGGACGAAGCGGCGGCGATGGTGGCTCGCCGG
ATCCCGCCGCTCAGGCGGCCGCCGAGTACCTATCCAAGCTTGCCCTCCAGAAGGGGAGCAAGGACAACATCACCGTCCTT
GTGGTCGACCTCAAGGCGCATAGGAAGTTCAGGAGCAAGACTGACAATAACAACA-------------------------
--------------------------------------------------------------------------------
GATAGTTATAAGCAACCTATA--GGAAGCTCAAGACCAAAACCTGATGACAGTGACAGTGCATGTACAAATTATTTTTTG
TTTCAAAAGTAGTTAGATTTGAAACATGAAAATCATATGCACAGATTTTCTTGGAAAAA-GTGCTTTTAGAATAACATAA
TTGTGTTGATCCTTGCACATAC----ACTGCAGTACAAAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TAGCAGTTAAGTTATATTTTGAAGACCCATGTCAAT
GTTCAAAATGTCACCTTCTCATGTCGTCCCCTTGGTGTCCTTATCTTTCTTCGTCTTGTCGACCTCCTCTCCTGCACCGG
---------------------CATGGAGGTAAGCACCTTACAACGACCCTCCCATCCTTGCATTGTTATTGTTAGGTCAT
TAGATAAGGAATTTCCATAACAAGCTCTCAATCGAAGGTGTCCTCCCAAAACACCCCACTGACTACATTTTCAATTGGTT
TATTTTCTTGCAGTTGTGGTTGCCTCTAGGACAGTGGAAGGACAGTGCGATGACAAGCACGGTGTTGAGCAACATTAAGT
TGATCCACT--ACA--TCAACAGAAGACAACCGTCGGACTAATCTTCGCTGGCCGCGTGCCTCAGTACTTTGCTTTATTT
CTACACTTCTGCTAGATGAATGTGCACTGGGTTGTAATATGTTGATACTTTTTTCTTTTACTTTGCTGTTAGAATCTCAT
GT----------------CTTTATTAGTTT-AAAGTTGGGCACGTTTTGCGTGTTTCTTCTAAAAGAAGTA---TTGGGT
TTATTAGATTCTTTCTCTCCAATCATATGTTCCCTTTTCCTGGAATGGATAGAGAATCCTCTTTGGCACGGAAT
>chr1D_685
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GGGCGGCCGAGATGCGACCACGCGACCCGAGGCTGT
GAGCCGCCGGCCGGCCGTCCATCGGCATCGCCTTGCTTCGTCCCCAGGGCAGCTCCCGTGCCCATGCCCGCGCACCCACC
CACCGCCAACCACTCACTCCCTTCTCCCCCTTGCCTCCGTCGCCATCTCCGTCTCCACCTCCATCCATGACTACCCAGCA
CCAG------------CAGCAGCGCCAGTCCACGGCCGCCTCCTCCTCCTCC------CCACTACCACCGCCATGGCCCT
CCCTTAGGCTTAGTCTTAT------CCCCGCGCGCCGGTCCCCATGGACGCCCTAGGCGCCGCGCTGCCGCGGCTCGCTC
TCGCCGACGCCGACG------CCGGGCCGGACGACGCGTGCGGGAGCCCCTGCTCCGTCGCCAGCGACTGCAGCAGCGTC
GCCTCCGCCGACTTCGAGGGCCTCTTGTCCCCCTCCGGTGCCGACGCGGGCCCGCCCTCGCTCCTCTCCGACGACCTGCC
CGCGGCGGCCGCCGAGGCCGCGGCCGTCCCCGGCGGCGCCTGCAGGAGCGTCTTCGCGCTCGACTCGCCGCCGCTCTGGG
GGCTCGAGTCCGTCTGCGGCCGCCGCCCGGAGATGGAGGACGCCGCCGCCGTCGCCCCGCGATTCTACCGCGTCCCGCTC
TGGATGGTCGCCGGCGACGGCGCCGCGGTCGACGGCCTCGACCGCGCCTCCTTCCGCCTCCCCGCCCACTTTTTCGCCGT
ATACGACGGCCACGGCGGCGCCCAGGTCGCCGACTACTGCCGGGACAAGCTCCACGCCGCGCTCGCCGAGGAGCTGCGCG
CCGCAGAGGACCGTGTCGTCGGATGCGACGACCTCAGCTCCCTGGACTCCAAGAAACAATGGGAGAAGGCGTTGGTGGAC
TGCTTCTGCCGCGTCGACGCCGAGGTGGAGGCGCCGGACACCGCGGGGACGACGGCGGTGACCGCGGTCGTCTGCTCGTC
CCACATCATCGTCTCCAACTGCGGGGACTCGCGGGCGGTGCTGTGCCGGGGCAAGGCGCCATTGCCACTCTCTCTGGACC
ATAAGGCACTATCATCA--TTCATCACATTTGCTCTTTACCCCTGCAATTGCCTCCGAGTTCTTGAGTTCATCAGATACA
CTGTCTGAATGTTGCATTT----ATTCTCGATTCAGCCCAACAGGGAAGACGAGTACGCGAGGATCGAGGCGCTGGGCGG
CAAGGTCATCCAATGGAATGGCTACCGAGTTCTCGGTGTTCTTGCCATGTCGCGCTCCATCGGTACGCA-----ATTTTC
CGCTCCTGGATATTTCAGAGCAAAGTTATGTA----------------------------CCTTAATTAGGAAATTGGCT
ATTTACCTCCAATCTCATTGAGGTCAACGTTTAACTTTAGGTATCGAGTTTCTAGTTATGGTGTCAAGGAAAATCTTTGC
AG----ACTGCACTGGTTCTTCTCTGTTCTTGGAAAAAAAATGTTGGTGATATCTGAATTGTGATGTGTGGTTCAGGAAT
CTGTCTATTTTG-GCTGGCAAAACTTTCATGAGCTATACTAATTTTTGACATTA-GTCAAGTTAGTGATCATTTGTGTGA
TGGCCTTAAATTTCTCCATCACTTGCACATACCTTTGAAAAAG--------------------------TGGGCTATCAT
AGATAACAAATACTCCCCCCTGTCCATAATAAGGGCCTGTTCGGATTCCCTCCTCTCCACAACTCCGCTCCCGGAGCTGG
AGGAGCGGCAGTACAAAACCACGGAGTGGGGAAGGAGGCGCTTCACAGATCCTCTGATTTCACGGAGTGGGAGGTTTACC
GAACAGCCCCTAAGTGTCGCAGTTTTACAAAGGCTGAACTAACCTTAGTGCAAAACTGCGACACTTATTTTGGATTGGAG
GGAGTACTACTCACACATCACAATCTGATGATACGCTCAGACTGTACAAGTAGCTGGGTGTATTCATGC----TTACTAA
GGAATGGCTCATCTTCCCATGCTTGTATGTTCTGCCCCTCAACAAATTATTCAGTGACTGACTGAGTAATTTGATACCAG
TTATGTTCACTGTAATCCTGTGCTCTGCTTTTCTTCTGAACTTCTGAACTGGATTCATGGTTATGATAGTGTTGTTGATC
TACTTGCAGGGGACAGATACCTGAAACCGTACATAATCCCGGTCCCGGAGGTGACGGTCGTTGCCCGGGCGAGAGAGGAT
GAGTGCCTCATCCTCGCAAGCGATGGCCTCTGGGACGTGTTGTCGAATGAGGAGGTGTGTGACGCCGCTCGCAAGCGGAT
CCTACTGTGGCACAAGAAGAACGCTACCGCCTCCTCCTCCATCTCCCGAGGACGAAGCGGCGGCGACGGTGGCTCGCCGG
ATCCCGCCGCTCAGGCGGCCGCCGAGTACCTATCCAAGCTCGCCCTCCAGAAGGGGAGCAAGGACAACATCACCGTCCTC
GTGGTTGACCTCAAGGCGCATAGGAAGTTCAGGAGCAAGACTGACAATAACAACA-------------------------
--------------------------------------------------------------------------------
GATAGTTATAAGCAACCTATATAGGAATCTCAAGACCAAAACCTGATGACAGTGACAGTGCATATACAAATTATTTTTTG
TTTCAA--GTAGTTAGATTTGAAACATAAAAATCATATGCACAGATTTTCTTGGAAAAA-GTGCTTTTAGAATAACATAA
TTGTGTTGATCCTTGCACATAC----ACTGCAGTAGAAAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TAGCAGTTAAGTTATATTTTGAAGACCCATGTCAAT
GTTCAAAATGTCACCTTTTCATGTCGTCCCCTTCGTCTCTGTATCTTTCTTCATCTTGTCTACCTACTCTCCGGCATCGG
CATGTCGTCGCCCTCGTCTCCCATGGAGGTAAGCACCTTACAACGAGCCTCCCATACCTCCATTGTTATTGTTAGGTCAT
TAGATAGGGAATTTCCATAACAAGCTCTCAATCGAAGGTGTCATCCTGAAACACCCCACTGACTACATTTTCAATTGGTT
TATTTTCTTGCAGTTGTGGTTGCCTCTAGGACAGTGGAAGGACAGTGCGATGACAAGCGCGGTGTCGAGCAACATTAAGT
TGATCCACTACACA--TCAACAGAAGGCAACCGTCAGACTAATCTTTGCTGGCCGCGTGCCTCAT---TTTGCTTTATTT
CTACACTTTTGCTAGATGAACGAGCCATGGGTTGTAATATGTTGATACTTTTTTCGTTTACTTTGCTGTTAGAATCTCAT
GTTGAGCACGGTTTATGTCTTTATTAGTTTCAAAGTTGGGCACGTTTTGCATATTTCTTCTAAAAGAAGTAGTATTGGGT
TTATTAGATTCTCTCTCTTCAATCTTATGTTCCCTTTTCCTGGAATGGATAGAGAATCCTCTCTGGCAAGGAAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------------------------------------
---------------------------------------------------------------------S----------
----S---S-----------------------------S--------S---------S----------------------
---SSSSSSSSSSSSS-----------------S------S-----------SSSSSS--------------------SS
------------------S----------------------------------------S--------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
------------------------------------------------------------------S-------------
------------------------------------------------------S-------------------------
--------------------------------------S-----------------------------------------
------------------------S-----------S--------S-----------------------------S----
----------------------------------S-----------------------------------S---S-----
------------------S------S-------------------------------------------S-S--------
------------------------------------------------------------------S-------------
----------S---------------------------------------------------------------------
-------------------SSSS---S-----------------------------------------------------
---------------------S----------------------------------------------------------
S-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----------------
-----S---S-----------------S---------------------------S---S------S-------------
--------------------------------------S---------------------------S-------SS----
-----------------------------------S-----------------SS--------------------S----
--S--------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------SSS-SSS-----SSSS-------------------------S----
--------------------------------------------------------------------S-------SS-S
SS----------------------------------------S---------S--------------S------------
------S---------------------------------------S-----------S---------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
-------------------------------------------------------------------S------------
-----------------------------------------------S-------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------------------------------------------------------------------------
------------S----------------------------------------------S---------------S----
S-S------------------SSSSS--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
------------------------------------------S-------S--------SS--------S----------
----------S------------------------------------------------------------------S-S
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------SS----------------------------------------------------S---------S-
------------------------------------------------------------S-------------------
--------------------------S------S----------------------------------------------
--------------------------------------------------------------------------
>forward_85
-----------------------------------------------------------------TGTACGCCCGCTCTT
TCATT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_1591
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATTCCTGGAC
TGCTTCTGCC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_887
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CCATGACTACCCA
GCACCAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_3188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TATCACCGTCCTT
GTGGTCG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_2927
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CGTACATAATCCCGGTCCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_3811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CCGTCTTGTTCACCTCCTCC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
