>input_sequence_39693
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------------------------------------------------------------CTGCACTCT-----------
---------------GCGCCCGTGCCGGACCGACGCCATCACTATCTCGGTGTCCTGTGTGCAGTGCACGCGGCCACACA
TTGTCACTGGAGGGCAGGTTGAAAAGGC--CA-TGGCACCCTTGGCGTGACCCACTGTTAACCGACACTATCTACTCCTA
CTACTACTCTGCATCCTCTCCCCCTC--CCCCATCCCCCATCTCCATCTCCATCTCCCTGGCAATGGCGTCCGCCTCCAT
CGCTCCCCCTCTCCTCCTCTTCGTCGCCGTCCTCGCGGTCACCCTGGCGGCGGCGACGGTGGCAGCCGACGCGCATCAAC
CGGCTCCGGGT---GGTGACGGTGATGATCGTCAGCTGATGGTAAT-TGATCAAACTTTTCTCGCG---------GAGTC
AACTCCCAGTTTCTTCAT-----------------AATCAATCAGTAGCTACCGGTCACAAGTTAGTTCAGACTAATCTT
CCTATAGCTAGTGTTTATTATTCTCAATCTAAGCTTAGCCGCTCTCTGTATTGTATTCGGGGTCATCAGTTACTCTTCTT
CACCTGCAAAAAAAAAATCAGTTACTCTTCTTCTGCAAAAAGAAAAAAAAAAGGGGATGAATCTAGTTGCTG--ATCATA
TATAAATAGACGTGAGGCAGAGAAGGATACGCGCGCGGCCGTCCGAAGGTGGCGGACGGGCTTGCTTCTATTAATGCACG
CTCTCTCTACCTCTCCACG----------CATGCATACACCTCC------------------------TCCATC-----C
ATCCATGGCGGTCTCC---AAGCCTCTCTTCCTCGCCGCCGCCGCCGTCGTCCTCCTCGTTGCAACCCTGCTCGTGGCCG
TGGACGCTGATGGTTCCTCCTCGGTAAACAGATAGACGAACACATGCATTTGCTCTGAACGTATGTTACGAACCCAGAGA
CGCGTTAGCTATCCTGATTAAACTAATTAATCACTTCCCGCGCATGCATGGCAAAGAATGAAAGTTTCTTGCTTTAATTA
GGTCTCCACGCTCTGTTGATTGTCTCGGAGGTGAAATGCCATTGCTTGATATGCCTACCTCCGTTTATATTTCTTTTCCT
TTTCTTTTTCTTCTGAATCTGCAACCATGAATTTACTTCCACACAGTTTCAGACCATGAAGATATATATATATGGTGCTC
AGTTTCATATCTTGTGTAGCCATTGCATGCTCGATGATCGTACATGTATACGGTGCAGGC--------------GGCGGG
CGGCGGCGGCGGGAGGACCCTGCTGGGCATAGACTGCCCCAAGGCGTGCGAGGCGCGGTGCGGGAGGAACTGGAAGAACG
AGATGTGCAACAAGTTGTGCAACATCTGCTGCGGCAAGTGCAGCTGCGTCCCCTCCGGCACCGGCCAGGACACCCGCAAC
GAGTGCCCCTGCTACGCCAACATGAAGAACACCAAGAACGGCAAACCCAAGTGCCCCTAAAAC----CTAAACCAAACTA
GCCAAGGCAAGCAAGCATGCAAGGCGGGCTAAAAATTATGATCCCATCCCATCCATCAATAATCGCCGCCGCTCGACGCT
GGTGTTCATCTTAATTAGCCTGCCATTTTCCTTCCCTTTTGTTGTGGATCATATAGAATCGTGTATGCTAATGTGCTAAT
AATGTTAGTATAAGCTGTTTGTTTAGG--TCCTAATGAAGGGAGGAGGAGATCAATGAGAGGTAGACCGAAGCTCCATCT
TCCGTTCCCCTCTTGTGTACTCATCGTCCATTATGTATCTGTATTGCAAAATATGTAGTGTTGGAAGCAGTGTGGTTGGA
---------------TTGAGGTTCAGTATGTGCTGCTCGATTGGATGACTGGGGCAGCGTCTTGTGGATCCTTTTATTTT
GTCTAGCTGGGCAGCACTATTTTCTACCGTGTCTTCCTATTTAAGCGTCTGTAAAAAAAAAACCTCCTGTTTAAACATGC
AGTAAGTCATTAGAAGTTTTAATTAGGAAATAATATATGAAGATAAAATAGGGGATGTAGCTCAAATGGTAGA-------
--------------------------------TCCCATCTCCAGTTTCTAGTTTTCAGATTTAGATTTATTTTGTTC---
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>chr6B_1_TraesCS6B01G462400
ATAGACCTATTGTTTAACCTTGTCATCTGCTAAATGCAGTATGCTGCAGAATAAACATCTGTAAGTTCTTTCTGTCCATT
AATAACTTGTGCTTTTCTGAGTTTCTTCTCTAG---TCATAAATATTAAAGCCGTATCCTGATTGATAAGTTGTGCTGTT
GTCTAGCAGGTTTATTTCCTGGGGATTTCTTTGCGGCATTCCCCCATTCTGTCCCCGATGATAAATCAAGGAAACAGAGG
GTATAGCATTGTTGTATAACACATTGTTGTGCATTTTAC-----TATGTGATTATTCTGATGTACGCTCGACAAAATGCG
ATCCAA---AAACACGACTCAGCCTAACGCTGTATATCTGGGAAGGCGGTGGA-------TCTTCCCATTCA---GTTTT
CACACCTCCAGTTAGCTCAG--TCTCAGAGCAGCTGGGCAAAACAAATATACTGAAAGATCTGTGGTGCATTGTGTTATC
ACCATGGGGTTCCTGTCAGGATTCTCTTGTGCACCTGCCATTTGTTTGGGGTCTAACATGTTACTCCCTCCGTTCGGAAT
TACTTGTCTCGGAAATGGATGTATCTAGAACTAAAATACGTCTAGATACATCCATTTTTGCGACAAGTAATTCCGAACGG
AGGGAGCATCCTACTTTAGATGTGTTGTATTTCAGTCTGCATTTAGTGCGGTAATGTTGATATGCTGCAGTCGTTCTGCA
TTGTTGCACTGTCCGTTTACATGCCGACAACAATTTGGAAACGTTGTGAGTGCACGTTCAGTTGTAGCATGGTGGGGA--
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-----------------------------------TGAGCAGACGTGATTCAGAAAGGGGTCCAAAATTATTCACCTCTC
ATTTCCCACCAC--------------------------------------------------------------------
-------------------------------------GTCTGTGCACGTTCAGTTGAGAGGTGTATTGATGAGCCTCTCC
ACCGTGTCGCCACATTGGGGTGCCGCTCATAGTGGTCGGTGCACTGCGCT-CTGTTCCCATTCTGTTGGTGAACAGAGTG
-CAGTCGGTTCAGTGT-------------CTGTCACCCACCCACCGGAGCAGCACGCTAACTGCACTCT-----------
---------------GCGCCCGTGCCGGACCGACGCCATCACTATCTCGGTGTCCTGTGTGCAGTGCACGCGGCCACACA
TTGTCACTGGAGGGCAGGTTGAAAAGGC--CA-TGGCACCCTTGGCGTGACCCACTGTTAACCGACACTATCTACTCCTA
CTACTACTCTGCATCCTCTCCCCCTC--CCCCATCCCCCATCTCCATCTCCATCTCCCTGGCAATGGCGTCCGCCTCCAT
CGCTCCCCCTCTCCTCCTCTTCGTCGCCGTCCTCGCGGTCACCCTGGCGGCGGCGACGGTGGCAGCCGACGCGCATCAAC
CGGCTCCGGGT---GGTGACGGTGATGATCGTCAGCTGATGGTAAT-TGATCAAACTTTTCTCGCG---------GAGTC
AACTCCCAGTTTCTTCAT-----------------AATCAATCAGTAGCTACCGGTCACAAGTTAGTTCAGACTAATCTT
CCTATAGCTAGTGTTTATTATTCTCAATCTAAGCTTAGCCGCTCTCTGTATTGTATTCGGGGTCATCAGTTACTCTTCTT
CACCTGCAAAAAAAAAATCAGTTACTCTTCTTCTGCAAAAAGAAAAAAAAAAGGGGATGAATCTAGTTGCTG--ATCATA
TATAAATAGACGTGAGGCAGAGAAGGATACGCGCGCGGCCGTCCGAAGGTGGCGGACGGGCTTGCTTCTATTAATGCACG
CTCTCTCTACCTCTCCACG----------CATGCATACACCTCC------------------------TCCATC-----C
ATCCATGGCGGTCTCC---AAGCCTCTCTTCCTCGCCGCCGCCGCCGTCGTCCTCCTCGTTGCAACCCTGCTCGTGGCCG
TGGACGCTGATGGTTCCTCCTCGGTAAACAGATAGACGAACACATGCATTTGCTCTGAACGTATGTTACGAACCCAGAGA
CGCGTTAGCTATCCTGATTAAACTAATTAATCACTTCCCGCGCATGCATGGCAAAGAATGAAAGTTTCTTGCTTTAATTA
GGTCTCCACGCTCTGTTGATTGTCTCGGAGGTGAAATGCCATTGCTTGATATGCCTACCTCCGTTTATATTTCTTTTCCT
TTTCTTTTTCTTCTGAATCTGCAACCATGAATTTACTTCCACACAGTTTCAGACCATGAAGATATATATATATGGTGCTC
AGTTTCATATCTTGTGTAGCCATTGCATGCTCGATGATCGTACATGTATACGGTGCAGGC--------------GGCGGG
CGGCGGCGGCGGGAGGACCCTGCTGGGCATAGACTGCCCCAAGGCGTGCGAGGCGCGGTGCGGGAGGAACTGGAAGAACG
AGATGTGCAACAAGTTGTGCAACATCTGCTGCGGCAAGTGCAGCTGCGTCCCCTCCGGCACCGGCCAGGACACCCGCAAC
GAGTGCCCCTGCTACGCCAACATGAAGAACACCAAGAACGGCAAACCCAAGTGCCCCTAAAAC----CTAAACCAAACTA
GCCAAGGCAAGCAAGCATGCAAGGCGGGCTAAAAATTATGATCCCATCCCATCCATCAATAATCGCCGCCGCTCGACGCT
GGTGTTCATCTTAATTAGCCTGCCATTTTCCTTCCCTTTTGTTGTGGATCATATAGAATCGTGTATGCTAATGTGCTAAT
AATGTTAGTATAAGCTGTTTGTTTAGG--TCCTAATGAAGGGAGGAGGAGATCAATGAGAGGTAGACCGAAGCTCCATCT
TCCGTTCCCCTCTTGTGTACTCATCGTCCATTATGTATCTGTATTGCAAAATATGTAGTGTTGGAAGCAGTGTGGTTGGA
---------------TTGAGGTTCAGTATGTGCTGCTCGATTGGATGACTGGGGCAGCGTCTTGTGGATCCTTTTATTTT
GTCTAGCTGGGCAGCACTATTTTCTACCGTGTCTTCCTATTTAAGCGTCTGTAAAAAAAAAACCTCCTGTTTAAACATGC
AGTAAGTCATTAGAAGTTTTAATTAGGAAATAATATATGAAGATAAAATAGGGGATGTAGCTCAAATGGTAGA-------
--------------------------------TCCCATCTCCAGTTTCTAGTTTTCAGATTTAGATTTATTTTGTTCATC
GATTTGATTTTTTCCTCTACCCAT--------------------------------------------------------
---------------------------------------------------------------------ATACTTCCTCC
GTCCCAAAATAAGTGACTCAACTTTTTTGCTAACT-----GTATGAGAATAACACTCTTAGACACATATTATAAATGCAT
ATGACTCCAACTCAAAATTATGGTCTTGATTTTAATTTCCCTGTCCAACCAATTCTTCCAATTTTATAGCATAGCAAAAG
AGAGCAAACACATTGCAATTTTAGCGTGGTCATTGCAGTGCCGGCTTCAGAAATTTGCAACCGTGTATTCATGTGTATTC
ATTTTGCCAAAATCATTGCTGTTTTTCAAAAATTGTTACTCTTTTACCAAAATCAACATCGTTTTGTAAAAATTATGGGT
ATTCACATTAAGTCCCAAGAATACCCCTAGCGTCGCCCCTGGGTCATTGACGTTGTCCTTCTACCAAATCCATAATCT-G
TGCGTACAAATTACTCATATCCATTCTCAAATTTTATCTCACTGTAAATCTTGCAAAAGAAAAATCTACAATGGTCGCTT
AAAATTCCTCAATGACTACAACACAACCTTCCGTTATATTCATGCCTTCTTTTTTATTCATAAACTCTGCAATAGTCGTA
AGACACCATCATCTTTTGATGATCTCTAAAGCAAGTAGTATCTCATCACATTTTTTTATGGTTTCATCGCAACACACGTG
CATTGTGCTAGTATTAGTAAAAAGAAAAAAAAATGAGACCAACCCAAGGGCTAACCCTTGTTGGCATTTATTTATAGGAG
AAACTCCGCGAGCATCATGCGTCCAAGCCATGACTTGAACTATGGTGGGTTGGCAGCAACCTCAGCTGCCTAGCCAACGG
GTCGACGCCCCGTCCTCATTAGTAAAAAGAAGAAGTTTCAAGTGTTGGTAAACATTGAGGGGAGAGTCTGTGGAGCAGTT
GCCTCGAGCGACGCTCCAGTAGGCTAGCTCATTTGTACCTACAAATGTTAGCTTAGTTTATTCATTTTGTCCATTCCTTT
TTTATTTC------------------------------------------------------------------------
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------------------------------------
>chr6A_3
AGACATGTTGT-TTCAATCTTGCCATATGCTAAATGCAGTGTGCTGCAGAATAAACGTCTGTAAGTTCTTTTTCTCCGAT
AATAATTTGTGCTTTTCTGAGTTTCGTCTCTACTCATCATAAGTATTGAAGCCACATACTAACTGATTAGTTGTGCTGTT
GTCTAGCAGGTTTATTTCCTGGGCTTTTCCTTGCGGTGTT-CCTCATTCTGTCCCCGGTGATAAATCAAGGAAACAGGGG
GTATAGCATTGTTGTAGAACACATTGTTGTGCATTTTACTACAGTATGTGATTATTCTGATGTACGCTCTCCACGAAAAT
GAGAACCAGAAACACGTCTCAGCCTCACGCTGTGTATCTGGGAAGGCAGTTGATTGCTGGTCTTCCCATTCAGCTGTTTT
CGCATCTGTAGTTAGCTCAGACTCTCGGAGCAGCTAAGCAGCACAAATGTACCGATGGATTTGTGGTGCATTGTGTTATC
ACCAT-GGGTTCCTGTCAGGATTCTCTTGTGCACCTGCTATTTTTTTGGGGTCTAACCTGTTATATATGACGGCAGTG--
--------------------------------------------------------------------------------
-----GCATCGTACTTTAGATGTGTTGTATTTCACTCTGCATCTAGTGGTGTAATGTTGATATG-TGCACTCGTTCTGCA
TTGTTGCACTGTCCGTTTACATGCTGACAACAATTTAGGCACGTTGTGAGTGCCATGAGCCATCGCCTGTCTAAACGCTG
AGATGGGTTTTACCAGATAATAGTACTATTACTAGTAGGGCTTGTTAAAACATTTGTATTTATGGTCAGCTGAAAGGCAA
AATTGTTACTAAGCAAAACCGCCTTTCCTAGTAAATGCAATCCCTAACTAAAAGGTGATGGAAGTTGCTACCTGCTGTGC
TGTCCTGCTCTCCAACCTATTGGCTATAATAACTGTTGGCTTTATGGCGCTGTAAAAAACCCGCATGGGTCTACTATATG
ATATGTAAGCTAGCGGTACACCCTCTGTTTCTAAATACTGCGAGACATTTTGCCAGTTCAATTTAAACTGGCAAAACGTC
TTGTATTTAGAAATAGTTTAGCCTAAAAGGCGTCTTATATTTTGAGACGGAGGTCGTAGCATGTCAGATGTGCTCCTGCT
ACAATTAGAGGAGGTCTTGATAGCTTGGTTGTTGATGGTAGCTGTAAAGCCAGCATGGTTGGACGAAGCTAATTTTTTTC
TAGCAAAAAACCCTCCTGATGAGCTGCTCTGACCTTGAGCAGATATGATTCAGAAAGGG-TGCGAAATCAATCACCTCTT
CTTTTTACTACTCCCTATGTTCATTTTTATAAGGCCTTGAAGACATTTTAGACAGGATGCAAAATAGCTTATTTTCAATT
GTCTGAAACGACTTATAAAAGTGAACGGAGGGGGTATGTCTGTGCGTGTTCAGTTGAGGCCCTTATTGATGAGCCTCTCC
ACCATGTCACCATGTTGGGGTGCCGGTCATGGTGGTGGGTGCACTCTGTTGCTGTTCCCCTTCTATTCCTGCACTGCACC
TCAGTTGGTTCAGTGTTGCGTGC----GGCTGTCACCCACCCACCGGAGCAGCACGCTAACTGCACTCTGTGCACCATCG
TACTACCAGCTAGCTGCGTCCGTGCTGGACCGACGCCATCACTGTCT------------------------------ACA
TTGTCACTGGAGGGCAGGTTGAAAAGGCAGGGCTGGCACCCTTGGCGTGACACACTGTTAACCGACACTATCTACTTG--
CTACTACTCTGCATCCTCTCCTCTCCCTCCCCATCCTCTATCTCCATCTCCATCTCCCTGGCAATGGCGTCCGCCTCCAG
CACTCCCCCTCTCCTCCTCTTGGTCGCGGTGG---------CCCTGGCGGTGGCGACGGCGGCCGTGGACGCGCATCATC
CGGCTCCGGGT---GGCGATGATGACGATCGTCAGCTCACGGTAAT-TGACCAAACTTTTCTCGC-CTCACCAGTGAGGT
GAATCCCAATCTCTTCATGCCTTGTTGTGCCGCGTAATTAATCAGTAGCCACCGGTTACAAGTATA--------------
------------------------CAATCTAGGCTAAGCCTCTCTCTGTAATAAT-------------------------
-----AATAAAAA-----------------------------------------GGATGATCCAGTTGTTGATCATCATA
TATAAATAGACGTGAGGCAGAGAAAGATACGCGCGCGCCCGTCCGAAGGGGCCGGACAGACTTGCTTCTATTAATGCCTG
CTATATACGC------------TTTGCTTCACGCATGT-------TCTCCATCTCCCTCCGTCACCCTATCCTATCCGTC
ATCCATGGCGCTCTCCGAGAAGCCTCTCCTCCTCGCCCTCGCCGTCGTCGCCCTCCTCGTGGCCACCGTCGACGCGCAGC
AGGCCACCGACGGTTTCTCCTCGGTAAACAAATAAATCAACATTCCCACCTCTGTTGT----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTTCC--
--TCTTCTTCTTCCGAATCATCAACCTTGAAT----TTCCACACGGTCTCAGACTCTGAACAAATCTATATATGGTGCTC
GATTTCATATGTTGTGCAGCCATTGCATGATCAATATGAATATGATTGATGAAATTGTTGTATATATGCGTGCAGGCGGC
GGGCGGCGGTGGGAGGACGCTGCTGGCCATAGACTGCCCCAAGGCGTGCGAGGCGCGGTGCGGGAAGAACTGGAAGAACG
AGATGTGCAACAAGATGTGCAACATCTGCTGCGGCAAGTGCAGCTGCGTCCCCTCCGGCACCGGCCAGGACACCCGCAAC
GAGTGCCCCTGCTACGCCAACATGAAGAACACCAAGAACGGCAAGCCCAAATGCCCCTAAACCTAAGCTAAACTAAACTA
GCCAAG----GCAAGCATGCAAGGCGGGCTAAAAATTATGATCCCATCC-----ATCAATAATCTCCGCCGCTCGACGCT
CGTGTTCATCTTA----GCCTGCCATTTCCCTTTCCTTTTGTTGTGGATCATATAGAATCGTGTATGCTAATGTGCTAAT
ACTGTTAGTATAAGCTGTTTAGGTCCTACTCCTAATGAAGGGAGGAGGAGGTCAAAGAGAGGTAGACCTAAGCTCCATCT
TC---TCCTCTCTTATGTACTCATCGTCCATTATGTATCTGTATTGCAAAATATCTAGTGTTGGAAGCAGTCTGGTTGGA
AGAGTACGTTTGGTCTTGAGGTTCAGTATGTGCTGCTCCATTGAATGACTGGGGCAGCGTCTTGTGGATCCTTT----TT
GTCTAGCTGGGCAGCACTATTTTCTACCGT--CTTCCTATTTAAACGTCTGTAAAAAAAAT-CCTCCTGTTTAAACATGC
AGTAAGTCATTAGAAGTTTTAATTAGGAAATAATATTTGGAGATAAAATAGGGGATGTAGCTCAAACGGTAGAGCACTTA
GAATGCATTTAAGAGGCAGGGGGGTTGATACCTCCCATCTCTAGTTTCTAATTTTTAGATTTAGATTTATTTTGTTGATC
GATTTGATTTTTTCCGCTACCCAAATACTCCCTCCGTGCCAAAATAAGTGACTCAACTTTACACTGAGGTCGATACCTCC
CATCTCTAGTTTCTAATTTTTAGATTTAGATTTATTTTGTCGATCGATTTGATTTTTTCCGCTACCCAAATACTTCCTCC
GTGCCAAAATAAGTGACTCAACTTTACACTGAGAGAGGGAGTATGAGAATAACACTCTTAAACACATATTATAAATGCAT
ATGACTCCAATTCAAAATTATGGTCTTGATTTTAATTCCTCTGTCCAACCAATCCTTCCAATTCTATAGTATAGCAGAAG
AGATCAAACACATTGCAATTTTAACCT-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GGTCATTGACGTTGTCCTCCTACCAAATCCATAATCTTG
TGCGCTCAAATTACTCATATCCATTCTCAA---TTACCTCACTGTAAATCTTGCAAAAAAAG----TACAATGGTAGCTT
AAAATTCCTCAATGACTACAACACGACCTTCCGTTATATTTACGCCTTCTTTTTAA-TCATAAACTCTGCAATAGTCGTG
TGACACCATCATCTTTTGATGATCTCTTAAGCCAGTAGTATCTCATCACCTTTTTTTATGGTTTCGACGCAACGCACGTG
CATTGTGCGAGTATTAGTAAAAAGAAGAAG--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTCAAGTGTTGGTAAACATCGAGGGGAGAGTCTATTGAGCACTT
GCCTCGAGCGACACTCCAGTAGGCCGGCTCATTTGTACCTACAAATGTTAGCTTAGTTTATTCATT--------------
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>chr6D_832
CGTTG---------------------------------------------------------------------------
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------------------------------------------TGCACGTTCAGTTGAGAGCTGTATTGATGAGCCTCTCC
ACCATGTTGCCACATTGGGGTGCTGCTCATGGTGGTCGGTGCACTGCACT-CTGTTCCCATTCTATTGGTGAACAGAGTG
-CAGTCGGTTCAGTGTTGGTCGCGGCTGGCTGTCACCCACCCACCGGAGCAGCACGCTGACTGCACTCTGTGCACCATCG
TACCAGCTA--------------GCTGCACCGACGCCATCACTATCTCGGTGTCCTGTGTGCACTTCTCATGGCCGCACA
TTGTCACTGGAGGGCAGGTTGAAAGACAGGCA-TGGCACGCTTGGCGTGACCCACTGCTAACCGACACTAGCTA---CTC
CTACTAGTCTGCATCCTCTCCTTTCCCCACATCCTCCA----------TCCATCTCGTTTGCAATGGCGTCCGCCTCCTA
CGCTCCCCCTCTCCTCCTCTTCGTCGCCGTC---------ACCCTGGCGGCGGCGACGGGGGCCGTGGACGCGCATCATC
CTCATCTGGCGCCGGGCGGCGACGACGATCGTCATCTCACGGTAAACTGACCAAACTTTTCTCGCGCTCACCGGTGAGTC
AACTCCCAGTTTCTTCATGCCTCGATCTGTTGCGTGACGAATCAGTAGCTACCGGTTACAAGTT----CAAACTAATCCT
CATCTA-------TTTATCATTCTCTAGCTAAGCTAGCTTCTCTTCGTGTTC-------GGTTCATTATTTAGTCTTCTT
CTTGCAATAAAAA-----------------------------------------GGATGAATCCAGTGGTTG--ATCATA
TATAAATAGACGTGAGGCAGAGAAGGATACGCGCGCGGCCGTCCCAAGGGGGCGGACGGGCCTGCTGCTATTAATTCACG
CTCTCTCTACCTCTCCACACATTTTGCTTCACGCATGCACCTCCATCTCCATCTCCATCACCCATCCATCCATC-----C
ATCCATGGCGGTCTCC---AAGCCTCTCCTCCTCGC------CGGCGTCGTCCTCCTTGTTGTCGCCCTGCTCGTGGCCG
TGGACGCTGATGGTTCCTCCTCGGTAAACAGATAGATGAACACATACATTTGCTCTGAACCAATGTTACGAATCCGGAGA
TGCGTTAGCT----TGATTAAGCTAACTAATCACTTCCTGCGCATAGCA---AAAAAATGAAAGTTTCTTGCTTTAAGTT
GGTCTCCACGCTCTGTTGATTGTCTCGGAGGTGAAATGCCATCGATTCATATGCCTACCCCTGTTTAAATTTGTTTCT--
--TTGTCTTCTTCTTCTTCCGCAACCCTGAATTTACTTCGACACAGTTTCAGACCATGAAGAAATATATATATGGTGCTC
GGTTTCATATGTTGTGTAGCCATTGCATGCTCGATGATTACACATGTATACGGTGCAGGC--------------GGCGGG
CGTTGGCGGCGGGAGGACGCTGCTGGCCATAGACTGCCCCAAGGCGTGCGAGGCGCGGTGCGGGAAAAACTGGAAGAACG
AGATGTGCAACAAGATGTGCAACATCTGCTGCGGCAAGTGCAGCTGCGTCCCCTCCGGCACCGGCCAGGACACCCGCAAC
GAGTGCCCCTGCTACGCCAACATGAAGAACACCAAGAACGGCAAACCCAAATGCCCCTAAAGCTAAACTAATGAAGCACT
CCT------------CATGCAAGGTGGGCTAAAAATTATGATTCCATCC-----ATCAAT-ATCTCCGCCGCTCGACGCT
GTTGTTCATCTTA----GCCTGCCATTTTCCTTTCCTTTTGTTGTGGATCATATAGAATCGTGTATGGTAATGTGCTAAT
AATATTAGTATAAGCTATTTAGGTCCTAATGAAGGGAAAGGGAGGAGGAGATCAAAGAGAGGTAGATCGAAGCTCCATCT
TCCGTTCCCCTCTTGTGTACTCATCATCCATTATGTATCTGTATTGCAAAATATGTAGTGTTGGAAGCAGTCTGGTTGGA
AGAGTACGTT-GGTCTTGAGGTTCAGTATGTGCTGCTCCATTGAATGACTGGGGCAGCGTCTTGTGGATCCTTT----TT
GTCTAGCTGGGCAGCACTATTTTCTACCGT--CGTCCTATTTAAACGTCTGTAAAAAAAAA-------------------
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--------------------------------------------TTGGTAAACATTGAGCGGAGAGTCTGTGGAGCGCTT
GCCTCGAGCGACGCTCCAGTAGGCTGGCTCATTTGTACCTACAAATGTTAGCTTAGTTTATTCATTTTGTCTATTCCGTT
TTTTCATTTGTAACTTTTGGTTATATTTCAGAAACTTTCCAATATACATACTACAAAAATTACTTCACATTTTTTACAAT
GTTCATCGTGTAGTTTAAAAATGCGAATGCAGCGTAAACATTTTGTTCACGCAATTGCTAAAAATGTTTGTACTATTCAC
AAACATGTTTGTGACATTTTAGAATTTCATAAGTTTCAAACAAATGTTCATGACATTTTAAGAAAATGTTTACAGAATGT
AATTTTTTGGGCGTAATTTTAAAATAATGTTAAATAAAATTGAAAAAAAATCTTGATACTTAAAAATGAAATGCGTATCA
ATAAAATGTTTTACAATGTAAAAGAATTGTGCTGGTAATTTTACAAAATGTTTCTACCACTCCAAAAAATGTAGCGTGTT
TTGAAAAGTGTTTAACATTTATTCAAAAAAAAAGTTCAAACATGTATTAAAACAATGTTCATCATATATGTGAAAATTGA
TCAACGCGTATTAATAAAACATTCCGCGCACATACAAAAAACGTACAATGTATTAAAAAAGTCAACATGTATTAGGAAAA
AGAAAAAAAGGAAAGGGAAAGTAAAAACACAAAAAAAAAATCTGTCGCAGCAAGTGCACCTGCGTCCCCTCCGGCACCGG
CCATCACACGCACAACGAGTGCCCCTGCTGTGCCAAGATGAAAAACTCCAAGAACGACAAACCCAAATGCTCATTACCTA
AACTAATCAAGCACCCCTCATGCAAGGTGGAATGTGAATTATAAGTCCATCCATCAATAATCTCTGCAGCTAGCTGGTGT
TCATCCATCCATTAATCATCTTAGCGTTTGTGTATCTGACCGATGTCGATTTTCCTTTCGTTGTGGATCATATATGATAT
GCCAATTATAATAGTACAAGCTATTTGGGTCCTAATGAAGGGAGGAGGAGATCAAGAGAGGTAGATCTAAGCTCCATCTT
CCCCTCTTGTGTACTCATCGATTATGTATCAGTATTGCAAAATACGTAGTATTGGAAGGAAAACAAATATGTGTATGTCT
TGAGGTTCGACATTGTTTGATTGAATAATGGGGCAACGTCTTGTGGATCCTCTGGGTAGCACTATTTTTGTATCATCTCC
TATTTAAACGCCCGTAAGAAAAAATATCTCCCGTTTAAGCATGTAGTTCAATAGGATTGTTAATTGGGGATAATATATCA
AGATAATAAAAGGGGATGTAGCTCAAATGGTAGATC
>SNPs
-S-S-SS-SS-S--S--S----S---S-------------S---------------S--------------S-S---SS-
-----S-------------------S------S---------S----S-----SS--S--S-S----S------------
-----------------------SS----S------SS--S--S-------------S-------------------S--
----------------S----------------------------------------------------SS--SS-SSSS
SSSS-S----------S--------S-------S-------------S--S-----------------------------
-S--S--SS-----------------S--------SS---SS------S---S--SS---S-------------------
-----S--------------------------------S----S-------------S-----SSSSSSS--SSS-SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS-----S-----------------------S-------S-----SS--------------S----S----------
------------------------S-----------S-SS-------------SSSSSSSSS-SSSSSS-SSSSSS-S--
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-------------------------------------------SS--------------S-S-S----S-S--------S
S---SSSSSSSS--------------------------------------------------------------------
------------------------------------------------------------S-------------------
---S--------------------------S---------------------------------S---------------
--------------------------------------------------------------------------------
------------------S------S-------------------------------------S-S-S-SS----S----
----------------------------------------------------------------------------S--S
---------------------S-SS-------------S----------------------------------------S
-------------------------------SSSSSSSSS-------------------S---S-SS-----------S-
----------------S----S---S-----------S-S----------S-----------------------------
--------------------------------------S-----------------S-------SSSS--S-------S-
-S-S--SSSSSSS-----S----------------S----S-----------SSSSSSS--S----S-S---S-------
-SSSSSSS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S---S-S----------
-------------------------------------------------S------------------------------
------------------S------------S----S-------------------------------------------
----------------------------S--------SS-----S------------------S----------------
------------------------------------S--------S--------------SS----------S--S----
S---------SSSS-------S----S-----------S------SSSSSSS---S---------------------S-S
------------------------------------------S-S--S-----------S-S-----S----S---S-SS
SS----S------------S------S-----------------------------------S-----------------
S---------S---------------------------SS----------------------------------------
------------------S-------S--------------------------------------S--------------
--------------S-----------------------------------------------------------------
--------------------------------------------------S----------S-----------S------
------SSSS---------------------------------------SSSSS----------S---------------
-------------SSSS----------------S----------------------------------------------
--------------------SSS-SSS----------------------------S------------------------
-----------------------------------------------------------------------S--------
--------------------------------------S----S------------------------------SSSS--
------------------------------SS------------S----------------S------------------
------------------------------------S--S--------------------------S-------------
-----------------------------------------S--------S----S--------------------S---
---------------S-------S--------------------------------------------------------
--------------------------------------------------------------------------------
--S----------------------SSSSSS-SSS-------------------------S-------------------
----------S--------------------------S-S-------------S---------S-----S------S---
---S-------------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S--------------------
----SS------------------------SSS---S---------------------S--SSSSS---------S----
------------------------S---------------S-S-----------S-S----------------------S
S--------------------------S----S----------------S---------------SS------S------
--------S-----------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S--
-------------------------S---------------------------------------------S-----S--
---SSS-S------------------------------------------------------------------------
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>forward_745
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-----GCACTGTCCGTTTACATGCC-------------------------------------------------------
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------------------------------------
>reverse_2437
--------------------------------------------------------------------------------
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------------------------------------ACACCTCCTCCATCCATCCA------------------------
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------------------------------------
>forward_1864
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----TACTCTGCATCCTCTCCCCC--------------------------------------------------------
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>reverse_3297
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----------------AGCCTGCCATTTTCCTTCCC--------------------------------------------
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>forward_3171
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-------------------------------CCAAGAACGGCAAACCCAAG-----------------------------
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>reverse_4733
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------------CATCATGCGTCCAAGCCATG------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
