>input_sequence_39677
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----------------------------------------------TCTTTAAATACAGCTGCATCCTGCAGCGCTCCCA
AGGCAGCAAACAACAACCGGCCGGGTCACAC-------------------------------------------------
-------GAGAGAGGGATAGAGAGAGAGTGAGAGAGCGA-------AAGGAGGAGGAGGAGG--ACGACCACGAGCAGGG
GGAGGAGGAAGGAGCAAGGATGGGTCAGAGCCCCCTTATCCGGCTGCCGGTGGCGGAGCAGATTCAGCCAGAGGTGGCAA
CCGGTGGCAGCAACAGGTGA----TT---TTTCCGGGAAAGCTATGT-TTATTCACCAGAATCGGCTCTTGCCGCTGGCT
AATTACAACTGCAGCTGCAGCTAATCGTAAGGTGAATAGATGAACTTATGAGA--------GCCATGTTTAATTCGACA-
----GTGTGTGTGTGCTACTACTACCTTTCATCAGGAAAAAAAAAGTAGCGCAGTTGTTAGGTT-GACAGCATCGGAGCT
GCTATTGGCTATTACGCTTA-GATGAAACCAA-TGCCTTTATTTATATTATT----TTAT--------------------
------------------------ATACAAAAGAGGTGTAGCTCAATTTATCGTTAGGATCTCCTTAACCTGTTGCCAGT
CAGATAAAAATCGACAAGAAAATCAAAAGCTAAGTCAAATTTAATGCAAGATAACAGTGATCTTCCGCAGAGGGTTCTCG
TACCCTTTTTTCTCTTTAATGCAAGATACGCATGCTATGCGTATCTAAGAAAAAAAAAGATACCAGTGATCTTAAAAACA
CCACAATAGCTATATGTAAGTTTACTGAATTCGCCGATTTTGTGGGAGGAGAAACGGATTTTGTGGCAGGAGAAACGGTT
GGACGAGGAAGAAACCTGGAGAAAGAAGAAAGAATGAC------------------------------------------
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---------------------------------------------------------GGGCTGTTGGATCTTAGTCTAAT
GACCCAGAAAACCGACTTACCCAAGATAAATTCTGGAAACACATAGAAAATGAGATGTCATGTAAGAAGTCATGAATATA
CTTCACCGCCGTTCCAAACTTCCG--ACACACAAAGGAAAAACATGTGGATTCTAGTCATGAAGGGGG------AAATAG
GAGAAAA-CACTCATGTTTATTTTCCTCTAAAAATACTTATGG-ATTTTCC-TTTACTTGATTTCATAGGAATATTGATG
AGCACAATACAAGATCGTAGCATTTTTTTTTCAATATGAATTTATTCATTCAAAGTCTCTACGTGTTTCCTTTTATTCTA
GACGGGGCCTAATACCATATAGATGTTCTTCATCCAAAGAAATATATAT--GTCATAATGCATGGATTGTTCTTGTATTC
TTGGGGTGATCCAACCATTTGGAGG---------ACCCCCACCATAAAATAGAGACATAAGTTTCAAAA--TAGAATACC
TTAGTGGATGCATGTTTTTACTGGCAAACATAAGCTTAAT-TACTATTAAACTGATCATTAACCCATGAATTAACACTA-
-----------TTTTTG-TAACCCGCAGGAAGGAACAACCTGGCAAGTCTACAAAAGCTACAAATAAATACTACAAAAAC
TCAAGAAAAGACGATCTAGTTTTAAGGGCGACACTGGACTCAATTACTAGAATTGGATAAAATTGCGATCCGACGATGGA
AAGGAACATGTGAGTTTTTCTTACCTGATATAT----TAGGCACTAATTATGATACATGAAGTTCCGTTTGGGTGTAGTT
GTTTCATTTTGGGAAATTTCTCACATGAGAAACTTTTTAGGCAATCACTTTTAAAAGGAAAAGCTTAGTTCCCTTATGTT
ATTTAATACCCTACATTTATTATTCCCATTACAAAAATG-TTAACAACGCCATC-TTTCCCCTCTTTCAGGCAATTACTG
GTGATTGTACAAATATCACCATGTCTACTTATTGTTTGTAGGAGAATGCAGCTGTGCCGCTTGCCATCTATAATTTTGTC
AAGAAAATGAAAAAATGTTGCATCTCCCGGCCTTGTACTT-CAAGCTTTTGACTCGTTAATGATTTATGTACTGCAGTTC
ATGTTTTCTTCAGACACGTAGCTTTTATGTACTCTAAATGTATTAACTTGTCGTCCTTAAAAAGTCAATGTCTCCCTCTA
TCCATT--------------------------------------------------------------------------
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----------------------------------------------------------
>chr4D_1_TraesCS4D01G317300
TATGCTTTGCGATGCTTCTTATGATGTGTGATGATGAATTTGTTGTGTGATGCTGCTCCTTATTGTTATGTGATGCATAT
ATTGCTGTATGATCCTTATATATGCTGTATATATTCAAATGAATTGAGCTAAAACAAAACAGAAAAAAGAAAAAAAAAAC
AGACAGAAACTATGCCGACGGCTAGGCCGTCGGCATAGAGCTGGCGTGAGCTCCCAGTGGCTGACACGTGGCAGGTCTAT
GCCGACGGCCTAGCCGTCGTTCAAACTAAGCCGACGACCAGGCCGTCGGCATAGCCCTGCCCCAGGAGAGCCCAGTTGCT
GCCACATGGCAGGCCTATGCCAACGGCCTAGCCGTCGGCATAGTTTCAAACTAAGCCGATGGCCAGGCCGTCGGCATAGG
ACTGCCACGTGGCTAGCAAGCGTTGGTCAGCACTTGACGGCGGCCCCCTACTTTATGTCTTAGGGTTAATTAATTAGTCG
CATGAAACTGAAGTTGACGGTCTAACATTTTGAACAAGGTTTGGAGTTTTTTCAAACCAAAGAGGTCTTCACACTCGGAT
ATGTTGGCGACATAATAGGCCTGCCGTACCGTATAGTGGAAAGCAACCATGCAAGAAAACAGAAATTTCCAACCACTGTG
TACTAAAAATCTGAATAACCTACATCGAATTTAGAGTCGGAAGGGGACAGTAGTCCGTTAGAAGCTTGAGAATTCCTTTT
CCTTGAAATTTGGATAATTTACAAAGTGCAGCTTTCATGAAAACCATCCG--TATATAGTACTAGTGGCAGTCAGCAAGC
TCAACTTGACGGTACAGGATAGAAGTCTGAAACCGCTCCCACGTCAGGGTAAAGACTAAAGACCAAGAGGCAAATGGCCA
TGCATTGACAAATGACAGTTGTGAAGCGGCACACTTCATGCCTGC--AAAAAAAGCGT--AAAAAATAACCAAAATAAAC
CAAAAAGCGCGTACACCTAATCTGTAATCTTGTACTCGAATACAGTTCTTTAAATACAGCTGCATCCTGCAGCGCTCCCA
AGGCAGCAAACAACAACCGGCCGGGTCACAC-------------------------------------------------
-------GAGAGAGGGATAGAGAGAGAGTGAGAGAGCGA-------AAGGAGGAGGAGGAGG--ACGACCACGAGCAGGG
GGAGGAGGAAGGAGCAAGGATGGGTCAGAGCCCCCTTATCCGGCTGCCGGTGGCGGAGCAGATTCAGCCAGAGGTGGCAA
CCGGTGGCAGCAACAGGTGA----TT---TTTCCGGGAAAGCTATGT-TTATTCACCAGAATCGGCTCTTGCCGCTGGCT
AATTACAACTGCAGCTGCAGCTAATCGTAAGGTGAATAGATGAACTTATGAGA--------GCCATGTTTAATTCGACA-
----GTGTGTGTGTGCTACTACTACCTTTCATCAGGAAAAAAAAAGTAGCGCAGTTGTTAGGTT-GACAGCATCGGAGCT
GCTATTGGCTATTACGCTTA-GATGAAACCAA-TGCCTTTATTTATATTATT----TTAT--------------------
------------------------ATACAAAAGAGGTGTAGCTCAATTTATCGTTAGGATCTCCTTAACCTGTTGCCAGT
CAGATAAAAATCGACAAGAAAATCAAAAGCTAAGTCAAATTTAATGCAAGATAACAGTGATCTTCCGCAGAGGGTTCTCG
TACCCTTTTTTCTCTTTAATGCAAGATACGCATGCTATGCGTATCTAAGAAAAAAAAAGATACCAGTGATCTTAAAAACA
CCACAATAGCTATATGTAAGTTTACTGAATTCGCCGATTTTGTGGGAGGAGAAACGGATTTTGTGGCAGGAGAAACGGTT
GGACGAGGAAGAAACCTGGAGAAAGAAGAAAGAATGAC------------------------------------------
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---------------------------------------------------------GGGCTGTTGGATCTTAGTCTAAT
GACCCAGAAAACCGACTTACCCAAGATAAATTCTGGAAACACATAGAAAATGAGATGTCATGTAAGAAGTCATGAATATA
CTTCACCGCCGTTCCAAACTTCCG--ACACACAAAGGAAAAACATGTGGATTCTAGTCATGAAGGGGG------AAATAG
GAGAAAA-CACTCATGTTTATTTTCCTCTAAAAATACTTATGG-ATTTTCC-TTTACTTGATTTCATAGGAATATTGATG
AGCACAATACAAGATCGTAGCATTTTTTTTTCAATATGAATTTATTCATTCAAAGTCTCTACGTGTTTCCTTTTATTCTA
GACGGGGCCTAATACCATATAGATGTTCTTCATCCAAAGAAATATATAT--GTCATAATGCATGGATTGTTCTTGTATTC
TTGGGGTGATCCAACCATTTGGAGG---------ACCCCCACCATAAAATAGAGACATAAGTTTCAAAA--TAGAATACC
TTAGTGGATGCATGTTTTTACTGGCAAACATAAGCTTAAT-TACTATTAAACTGATCATTAACCCATGAATTAACACTA-
-----------TTTTTG-TAACCCGCAGGAAGGAACAACCTGGCAAGTCTACAAAAGCTACAAATAAATACTACAAAAAC
TCAAGAAAAGACGATCTAGTTTTAAGGGCGACACTGGACTCAATTACTAGAATTGGATAAAATTGCGATCCGACGATGGA
AAGGAACATGTGAGTTTTTCTTACCTGATATAT----TAGGCACTAATTATGATACATGAAGTTCCGTTTGGGTGTAGTT
GTTTCATTTTGGGAAATTTCTCACATGAGAAACTTTTTAGGCAATCACTTTTAAAAGGAAAAGCTTAGTTCCCTTATGTT
ATTTAATACCCTACATTTATTATTCCCATTACAAAAATG-TTAACAACGCCATC-TTTCCCCTCTTTCAGGCAATTACTG
GTGATTGTACAAATATCACCATGTCTACTTATTGTTTGTAGGAGAATGCAGCTGTGCCGCTTGCCATCTATAATTTTGTC
AAGAAAATGAAAAAATGTTGCATCTCCCGGCCTTGTACTT-CAAGCTTTTGACTCGTTAATGATTTATGTACTGCAGTTC
ATGTTTTCTTCAGACACGTAGCTTTTATGTACTCTAAATGTATTAACTTGTCGTCCTTAAAAAGTCAATGTCTCCCTCTA
TCCATTAGCAATTATTATTTTTTTATTGAAATAAATTCCATTAGAAGGTAACAACTATAGGAAATTAAACGAATAGATAT
TGCAATTCCCCATCCCCTACCGGGGTAGCCATTTCGGCGATGCCGAATTCTGTCATCCCTATGCCAAGACTAAGAACCCA
AGATAGGGCACTACTATAGAAACCCTTATCCAAAAAGGTTATTTCTGTATTGTTCATCCAACTTGTCGTAGATACAATAA
TCACAAGCAACTCAGATGCAACATCGTTTCTATGAGTATTGGCAAGCATTCTGACCATTTATCCAATAATAATGGATTAT
TAACAAGAATCGATCCCAATAATCTTTAGACCTATCAGCTAAAACGGTAAACCCAAACAAAGCTGACAACTCTTGTTCAT
CAACCGGCTATTTGATTTGTAGACTAGCCTCGGTCCACTTCAATTCACCACTATATTGTGTGAGAGGCTTGTCGGTCGAT
AACGTTGGACTATCAGAGGTATATACCCTATGGGCATGGATAAACCTATTTGAATGAAGAGTGAATAGGGATACCTTGAG
CCCACATGTCGACGATTAGTGCATAGTCGATCTTACGATTTACGTAAGAGGGAATAGAAGTAGGGTGGTGCCCCAAGAGA
TCTCATTGATGATGAGGCTGACATGGTGATTTATCCGGTTCATGCCCAC----GGAACCTATTTTGGGAGACTTGGGACG
GATACGCTCGCCTGGCCCATGCGTCCTAGGCTTCGGACACGTGTTGAGGGGGTGTGGGGTCCACATGCATCTCCTCTGCC
ACCTCTTCGCCCCAATGACTTATATACACCCAAAACATTTCTCTGATTTAAATCGCAATTTTCCACCCCCGCCG-----T
GATGTATTACGAGGCTATCCAGTTCAATGCTCTCTCAGAGGGGGAA---ATCATCATCGTCATCACCTTCATCGAGATTG
TTGCTCCCAAGATAATGTGTGAGCGAGTAGTCCATCCCTTGGACTACGGGTCCATAGC
>chr5A_443
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------------------------------------------GCCCCCTACTTTACGTCGTAGGGTTAATTAATTAATCT
CATGGAACTGAAGTTGACGGTCTAACATCTTGAACAAATTTTGGTGTTTTTTCAAACCAAAGAGGCCTTCACACTCGGAT
ATGTTGGCGACATAATAGGCCTGCCGTACCGTATAGTGGAAAGCAACCATGCAAGAAAACAGAAATTCCCAACCACTATG
TACTAAAAATCTGAATAACCTACATCGAATTTAGAGTCGGAAGGGGACAGTAGTCCGTTAGAAGCTTGAGAATTCCTTTT
CCTTGAAACTTGGATAATTTACGAAGTGCAGCTTTCATGAAAACCATCCG--TATATAGTACTAGTGGCAGTCAGCAAGC
TCAAATTGACGGTACAGAATAGAAGTCTGAAACCGCTCCTATGTCAGGG-------TAAAGACCAAGAGGCAAATGGCCA
TGCTTTGACAAAT-ACAGTTGTGAAGCGGCACACTTCATGCCTGC--AAAAAAAGCGTAAAAAAAGTAACCAAACTAAAC
CAAAAAGCGCATACACCTAATCTGTAATTTTATACTCGAATACAGCTCTTTAAATACAGCTGCATCCTGCAGCGCTCCCA
AGGCAGCAAACAACAAGCGGGT----------------------------------------------------------
-------GAGAGAGAGAAAGAGAGAGAGAGGGAGAGAGAGGTGGACAAGGAGGAGGACGACGACA--------------A
CGAGGAGGAAGGAGCAAGGATGGGTCAGA---------------------------------------------------
-----------------------TTT---TTTCCGGGAAAGCTATATATTATTCACCAGAATCGGCTCTTGCCGCTGGCT
AATTACAACTGCAGCTGTAGCTAATCGTAAGGTGAATAGATGAACTTACGAGGTGAGC-----CATGTGTAATTCGATA-
-----TGTGTGTGTGCTACTACTGCCTTTCATCAGGG-AAAAAAAGTAGCACAGTTGTTAGGTT-GACAGCATTGGAGCT
GCTATTGGCTATTACGCTTAAGATGAAACCGA-TGCCTTTATTTATATATTTTTTATTAT--------------------
------------------------ATAGAAAAGAGGTGTAGCTCAATTTATCGTTAGGATCTCGTTAACTTGTTGCCAGT
CAGATAAAAATCGACAAGAGAATCAAAAGCTAAGTCAAGTTTAGAAAG--------------------------------
---------------------------------------------------------------CAGTGATCTTAAAACCA
CCACAATAGCTACATGTAAGTTTACTGAATTTGCAATTTGAATTAGTC--------AATTTTGTGGGAGAAGAATCGGTT
CGACCAGGAAGAAAGCTAGAAAAAGAAGAAAGAAGGACGGGCTGTTGGGAGTGCGGCGTTTCGGTGCACAGGCTCATCTG
CACCCGGTCAGTAAAAAACTCCAAAAAAAAAATCTAAAAAACTTCAAAAAATTCCAATTTTTTTGTGTGGTAGACAATTT
GATGTGTGAGGTTCGCTCCAAATTTTAGAGCATTGACATCTGAGCAGCTCTCAGCAAAAAAGACAAATCGGGTCAGAACC
GTGCGTGAACAGTAAACATTTTTACAGACCCTGGATTTGTCTTTTTTGTCGAGAGCTGCTCAGTTGTCCAAATGCTCTCA
AAATTGAAGCGAACCTCACGCATAAAAATATCTACCACATAAAAAAATTGATTTTTTTTGAATTTTTCTAGTATTTATTT
TGATTTTTTTTCGTCGGGGTGGGTGCAGCTGAGCCCGAGCTCAGAAATGGATTACCGGGGCTGTTGGATCTTAGTCTAAT
GACCCA-AAAACCGACTTACCCAAGATAAATTCTGGAAA-GCATAGAAAATGAGATGTCATGTAAGAAGAAATGAATATA
CTTCATCGCCGTTCCAAATTTCGG--ACACACAAAGGAAAAACATGTGGATTCTAGGCATGAAGGGGG------AAATAG
GAG-AAA-CACTCATGTTTATTTTCCTCCAAAATAC--TTATG-GATTTTCCTTTACTTGATTTCATAAGAATATTGATG
AGCACAATACAAGATTGTAGCC--TTTTTTTCAATATGAATTTATTCATTCAAAGTCTCTACGCGTTTCCTTTTATTCTA
GACGGGGCCTAAAACCATATAAATGTTCTTCAGCCAAAGAAATATATAT--GT-ATAATACATCGATCGTTCTTGTATTC
TTGGGGTGATCGAACCATTTGGAGG---------ACCCCCACCATAAAATAGAGACATAAGTTCCAAAA--TAGAATACC
TTAGTGGATGTATGTTTTTACTGGCAAACATAAGCTTAAT-TACTATTAAACTGATCATTAACCCATGAATTAACACTA-
-----------TTTTTTCTAACCCACAGGAAGGAACAACCTGGCAAGTCTACAAAAGCTACAAATAAATACTACAAAAAA
TCAAGTATAGACGATCTAGTTTTAAGGGCGACAATGGACTCAATTACTAGAATTGGATAAAATTGCAATCCGACGATGGA
AAGGAACATGTGAGTTTTTCTTACCTGATATTG----TAGGCACTAATTATGATACATGAAGTTCCGTTTGGGTGTAGTT
GTTTCATTTTAGGAAATTTCTCACATGAGAAACTTTTTAGGCAGTCACTTTTAAAAGGAAAAACTTAGTTCCCTTATGTT
ATTTAATACCCTACATTAATTATTCCCATCACAAAAATTGTTAATAACATCATC-TTTCCCCTCTTTCAGGCAATTACTG
GTGATTGCACAAATATCACCATGTCTACTTATTGTTTGTAGGAGAATGCAGCTGTGCAGCTTGCCATCCATAATTTTGTC
AAGAAAACGAAAAAATGTTGCATCTCCCGGCCTTGTACTTTCAAGCTTCTGGCTCGTTAATGATTTATGTACTATAGTTC
ATGTTTTGTTCAGACATGTAACTTTTATGTACTCTGAATGTATTAACTTGTCATCCTTGAAAAGTCAATGTCTCCCTCTA
TCAATTAGCAATTATTATATTTTTATTGAAATAAATTCCATTAGAAGTTAACAACTATAGGAAATTAAACACATGGATAT
TGCAATTCCCCATCCCCTACCGGAGTAGCCATTTCGGTGATGTCGAATTATGTCATCCCTATGCCAAGACTAAGAACCCA
AGATGGGGCACTACTATAGAAACCCTTATCCAAAAAGGTTATTTCTGTATTGTTCATCCAACTCGTCTTAGATACAATAA
TCACAAGCAACTCAGATGCAACATCGTTTCTACGAGTATTGGCAAGCATTCTGGCCATTTATCCAATAATACCGGATAAT
TAACAAGAATCGATCCCAATAATCTTTAGACCTACCAGCTAAAACGGTAAACCCAAACAAAGCTGACAACTCTTGTTCAT
CAACCTGCTATTTGATTTGTAGACTAGCCTCGATCCACTTCAATTCACCACTATATTG--------GCTTGTCGGTCGGT
AATGTTGGACCATCAGAGGTATATACCCTATGGGCATGGATAAACCTATTTGAAAGAAGAGTGAATAGGGATCCCTAGAG
CCCACATGTTGACGATTAGTGCATAGTCGATCTTACGATTTACGTAAGAA-GAATAGAAGTAGGGTGGTGCACCAAGAGA
TCTCGTTGATGATGAGGGTGAGATGGCGATTTATCCGGTTCATGCCCATGCATGGAACCTATTTTGGGAGACTTGGGTTG
GATACGCTCGCCTGGCCCATGCGTCCTAGGCCCGGGACACTTGTTGAGGGGATGTGGGGCCCACATGCATCTCCTCTGCC
ACCTCTTCGCCCCAATGGCTTATATACACCCAAAACCTTTCTCTGATTTAAATCACAATTTTCCACCCCCCCCCCGCCAT
GATGCACTACGAGGCTATCCAATTCAATGCTCTCTCAGAGAAGAAA---ATCATCATCGTCATCATCTTCATCGAGATTG
CTACTCCCAAGATAATGTGTGAGCTAGTAGTCCATCCCTTGGACTACGGGTCCATAG-
>chr4B_577
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----------------AGGCCTGCCGTACCGTATAGTGGAAAGCAACCATGCAAGAAAACAGAAATTTTCAACCACTATG
TACTAAAAACCTGAACAACCTACATCGAATTTAGAGTCGGAAGGGGACAGTAGTCCGGTAGAAGGTTGAGAATTAATTTT
CCTTGGAACTTGGATAATTTACAAAGTGCAGCTTTCCTGAAAACCATTTGTATATATAGTACTAGTGGCAGTCAGCAAGC
TCAACTTGACCGTACAGAATAGAAGTCTGAAACCGCTCCTACGTCAGGGTAAAGAC-------CAAGAGGCAAATGGCCA
TGCTTTCACAAATGACAGTTGTGAAGCGGCACACTTCATGCCTTC--AAAAAAGCGTAAAAAAG-GTAGTCAAGATAAAC
CAAAAAGCGCATACACCTAATCCGTAATTTTGTACTCGGATACAGTTCTTTAAATACAGCTGCATCCTGCAGCGCTCCCA
AGGCTGCAAACAACAAGCGGGTTACACACACACACGC-------------------------------------------
------------------AGAGAGAGAGAGAGAGAGAGAGG-----------GAGGAGGACG--A--------------A
GGAGGAAGAAAGAGCAAGGATGGGTCAGAGCCCCCTTGTCCGGCTGCCAGTGGCGGAGCAGGTTCAGCCAGAGGTGGCGA
CCGGTGGCAGCAACAGGTGATATTTT---TTTCCGGAAAAGCTATGT-TTATTCACCAGAATCGGCTCTTGCCGCTGGCT
AATCACGTCTGCAGCTGCGGCTAATCGTAAAGTGAATAGATGAACTTATGAGGTGCGCGC--------------------
------------GCGCTACTACTGCCTTTCATCAGCAAGAAAAA--TAGGGCAGTTGTTAGATT-GAGAGCATCGGACGC
GCTATTGGCTATTGCGCTTATGATGAAACCGA-TGCCTTT---TATATTTATTTATTTATATATTTTATATATACAAAAG
AGGTCTTTTTCAAAATAAAAAATAATACAAAAGAGGTGTAGCTCAATTTATCGTTAAGATCTCGTTATCCTGTTGTCAGT
CAGA-AAAAATCGACAAGAAAATCAAAAGCTAAGTCAAATGTAGAAAG--------------------------------
---------------------------------------------------------------CAGTGATCTTAAAAACA
CCACAATAGCTATATTTAGGTTTACTAAATTTAGAATTTGGATTCGTC--------GATTTTGTGGGAGAAGAAACGGTT
GGACGAGGAAGAAAGCTGGAGAAAGAAGAAAGAAGAACA-----------------------------------------
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----------------------------------------------------------GGCTGTTGGATATTAGTCTAAT
GACCCAGAAAACCGACTTACCCAAGATAAATTCTGGAAATGCATAGAAAATGAGATGTCATGTAAGAAGTCATGAATATA
CTTCACCGCCGTTCCAAACTTCCAATACACACAAAGGAAAAACATGTGGATTCTAGGCATGAAGGGGG------AAACAG
GAGAAAA-CACTCATGTTTATTTTCCTCTAAAATAC--TTATG-GATTTTTCTTTACTTGATTTCATAGGAATATTGATG
AGCACAATACAAGATCGTAGCAG-TTTTTTTCAATATGAACTTGTTCATTCAAAGTCTCTACGTATTTCCTTTTATTCTA
GACGGGGCCTAAAACCATATAGATGTTCTTCAGCCAAAGAAATATATATATGTCATAATGCCTGGATCGTTCTTGTATTC
TTGGGGTGATCCAACCATTTGGAGG---------ACCCCCACTATAAAATAGAGACATAAGTTTCAAAAAATAGAATACC
TTAGTGGATGTATATTTTTACTGGCAAACATAAGCTTAAT-TACTATTAAACTGATCATTAACCCATGAATTAACACTA-
-----------TTTTTT-AAACCCGCAGGAAGGAACAACCTGGCAAGTCTACAAAAGCTACAAATAAATACTACAAAAAC
TCAAGCAAAGACGATCTAGTTTTAAGGGCGACACTGGACTCAATTACTAGAATTGGATAAAACTGCAATCCGACGATGGA
AAGGAACATGTGAGTTTTTCTTACCTGATATTG----TAGGCACTAATTATGATACATGAAGTTCCGTTTGGGTGTAGTT
GTTTCATTTTGGGAAATTTCTCACATGAGA----------------ACTTTTAAAAGGAAAAACCTAGTTCCCTTATGTT
ATTTAATACCCTACATTAATTATTCCCATTACAAAAATTCTTAACAACGTCATCTTTTCCCCTCTTACAGGCAATTACTG
GTGAT-----------------------------------GGAGAATGCAGCTGTGCTGCTTGCCATCCATAATTTTGTC
AAGAAAACGAAAAAATGTTGCATCTCCCGGCCTTGTACTTTCAAGCTTTTGGCTCGTTAATGATTTATGTACTATAGTTC
ATGTTTTGTTCAGACACGTAACGTTGATGTACTCTGAATGTATTAACTTGTCGTCCTTAAAAAGTCAATGTCTCCCTCTA
TCCATTAGCAATTATTATATTTTTATTGAAATAAATTCCATTAGAAGTTAACAACCATAGGAAATTAAACGCATAGATAT
TGCAATTCCCCACCCCCTACCAGAGTAGCCATTTCGGCGAGGCCGAATTCTGTCATCCCCATGCCAAGACTAAGAACCCA
AGATGGGCCACTACTATAGAAACCTTACCCAAAAA---------CTGCATTGTTCATCTAACTCGTCTTAGATACAATAA
TCACAGGCAACTTAGATGCAACATCGTTTCTATGAGTATTGGCAAGCATTCTGACCATTTATCCAATGATAATGGATTAT
TAACAAGAATCGATCCCAATAATCTTTAGACCTATCAGCTAAAACGGTAAACCCAAACAAAGCTGACAACTCTTGTTCAT
CAACCTGCTATTTGATTTGTAGACTAGCCTCGATCCACTTCAATTCACCACTATATTGTGTGGGAGGCTTGTCGGTCGAT
AATGTTGGACTATCAGAGGTATATACCCTATGGGCATGGATACATCTATTTGAATGAAGAGTGAATAGGGATCCGTAGAG
TCCACATGTCGGCGATTAGTGCATAGTCAATCTTACGATTTACGTAAGA-GGAATAGAAGTAGGGTGGTGCCCTAAGAGA
TCTCGATGATGATGAGGGTGACATGGTGATTTATCCAATTCATGCCCACAA----AACCTATTTTGGGAGTCTAGGGCCG
AATATGCTCGCCTGGCGCATGCGTCCTAGGCTCGGGACACATGTTGAGGGGGTGTGGGGCCCACATGCATCTCCTCTGCC
ACCTCTTCACCCCAATGGCTTATATACACCCAAAATCTTTCTATGATTTAAATTGCAATTTTCCACCCACGTCG-----T
GATGCATTATGAGGCTATCCAATTCAATGCTCTCTCGGAGGGGAAAATCATCATCATCATCATCATCTTCATCGAGATTG
TTGCTCCCAAGATAATGTGTGAGCAAGTAGTCCAT-CCTTGGACTACGGGTCCATCGC
>chr5A_690
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-------------------------------------------------GTTGTCCGTTCGAAGCTTGAGAAATCCTTTT
CCTTGAAACTTGGATAGTTTACAAAGTGCAGCTTTCCTGAAAACCATTTTTATATATAGTACTAAT-GCAGTCAGCAAGC
TCAACTTGACCGTACAGAATAGAAGTCTGAAACCGCTCCTACGTCAGGGTAAAGACTAAAGACCAAGAGGCAAATGGCCA
TGCTTTGACAAATGACAGTTGTGAAGCGGCACACTTCATGCCTGC--AAAAAAGCGTAAAAAAAAGTAACCAAAATAAAC
CAAAAAGCGCATACACCTAATCCGTAATTTTGAACTCGAATACGATTCTTTAAATACAGCTGCAACCTGCAGCGTTCCCA
AGGCAGCAAACAACAACCAGGTCACAC-----------C---------------------------------------AG
AGAGAGAGAAAGTGAGAGAGGGAGGGAGGGAGA-AGAGAGA-----------GAGGACGACG--ACGACGAGGAGCAGGA
GGAGGAGGAAGGAGCAAGGATGGGTCAGAGCCCCCTTATCCGGCTGCCGGTGGCGGAGCAGGTTCAGCCAGAGGCGGCGA
CCGGTGGCAGCAACAGGTGC----TT---TTTTCGGAAAAGCTTTGC-TTATTCACCAGAATCGGCTTTTGCCGCTGGCT
AATTACAACCTCAGCTAC-----ATCATATAGTGAATAAATGAACTCATGAGGTGAGCTTCGTCATGTTTAATTCGGCAT
GCGTGTGTGTGC--------ACTGCCTTTCATCAGG--GAAAAA--AAGTGCAGTTGTTAGCTT-GAGAGCATCGGACAC
GCTATTGGCTATTGCCCTTACGATGCAACCGGTTGCCTTT---TATATTTATATATATACAGA-----------------
---------------------------------------AGCTCAATTTATTGTTAGGATCACGTTAACCTGTTGTCGGT
GGG---AAAATCGACGACAAAATTAAAAGCTAAGTCCAATTTAGAAAG--------------------------------
---------------------------------------------------------------CATTGATTTTAAAAATA
CCGCAATAGCTAAATGTAAGTTGACTGAATTTGCAATTTGTATAAGTC--------GATTTTGTGGGAGGATAAACGATT
GGATGGGCAAGAAAGCT-GAGGAAGAAGAAAGAAGGCC------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------GGTTGTTGGATCTTAATCTAAT
GACCAGGAAAACCGACTTACCCAAGATGAATTCTAAAAACACATAGAAAATGAGGTGCCATGTAAGAAGTCATGAATATG
CTTCACCGCCGGTTCAAAACTTCCG---ATACAAAGGAAAAACGTTTGAGTTATAGGCATATGTAGGGGG-GAAACATAG
GAGAAAG-CCCTCATGTCTATTTTCCTCCAAAATGC--TATGG-AATTTTC-TTTACCTGATGTCATAGGAACCCTGATG
AGCACAACACAACATGGTCGCA--ATTTTTCCTATATGAATTTACCCATTCAAAG--------------------TTCTA
GGCGCGGCCTAAGACCATATAGATGTTCTTCAGCCAAAGAACCATATAT--GTCATAATACATGGATCGTTCTTTGATTC
TTGTGGTGATCCAACCGTTTGGAGGTCGTATGTTACCCCCAACATAAAATAGAGACATAAATTTGAAAA--TAAAATACC
TTGGTGCACGTATGTTTTTACTGACAAACATAATCTTAAACTACTATTAAACTGATCATTGGCCCATGAATTAACGCTC-
--T---TTGTTTTGTTT-TAACCCGCAGGAAGGAACAATCTGGCAAGCCTACAAAAGCTACAAATAAATACTACAAAAAC
TCAAGCAAAGATGATCTAGTTTTAAGGGCGACACTGGACTCAATTACTAGAATTGGATAAAATTGCGATCCGGTGATGAA
AAGGAACATGTAAGTTTT-CTTACCTGGTATTATATATAGGCACAAATTATGATCTGTGAAGTTTCTCGTTTG-------
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----------------------------------------------------------
>chr4D_693
--------------------------------------------------------------------------------
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----------------------------------------------------GTCCGTTAGAAGCTTGAGAAATCCTTTT
CCTTGAAACTTGGATAGTTCACAAAGTGCAGCTTTCCTGAAAACCATTTT--TATATAGTACTAAT-GCAGTCAGCAAGC
TCAACTTGACCGTACAGAATAGAAGTATGAAACCGCTCCTACGTCGGGGTAAAGACTAAAGACCAAGAGGCAAATGGCCA
TGCTTTGACAAATGACAGTTGTGAAGCGGCACACTTCATGCCTGGAAAAAAAAGCGTAAAAAAA-GTAACCAAAATGAAC
CAAAAAGCGCATACACCTAATCCGCAATTTTGTACTCGAATACGATTCTTTAAATACAGCTGCAACCTGCAGCGCTCCCA
AGGCAGCAAACAACAAGCGGGTCACACACACACACACAC---------------------------------------AG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA---------------------------------------
-GAGAAGGAAGGAGCAAGGATGGGTCAGAGCCCCCTTGTCCGGCTGCCGGTGGCGGAGCAGGTTCAGCCAGAGGTGGCGA
CCGGGGGCAGCAACAGGTGA----TTTTTTTTCCAGGAAAGCTACGT-TTATTCACCAGAATCGGCTCTTGCCGCTGGCT
AATTACAACTGCAGCTGCAGCTAATCGTAAAGTGAATAGATGAACTTATGAGGTGAGCTTCGCCATGTTTAATTGGACAT
GTGTGTGTGTGTGTGCTACTACTGCCTTTCATCAGGAAGAAAAA--TAGCGCAGTTGTTAGCTT-GAGAGCATCGGGCGT
GCTATTGGCTATTGCGCTTATGATGAAACCGG-TGCGTTA---TATATTTATATTATTAT--------------------
------------------------ATAGAAAAGAGGTGTAGCTCAATTTATCGTTAGGATCACGTTAACCTGTTGTCAGT
GGG---AAAATCGACAACAAAATTAAAAGCCAAGTCCAATTTAGAAAG--------------------------------
---------------------------------------------------------------CACTGATCTTAAAAATA
CCACAATAGCTATATGCAAGTTGACTTAATTTGCAATTTGTATATGTC--------GATTTTGTGGGAGGAGAAACGATT
CGATGGGCAAGAAAGCT-GAGGAAGAAGAAAGAAGGCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGATGTTGGATCTTAATTTAAT
GACCCAGAAAACCGACTTACCCAAGATAAATTCTAAAAGCCCATAG-AAATGAGATGTCATGTAAGAAGTCATGAATATA
CTTCACTGCC-GTTCAAAACTTCCG---ACACAAAGGAAAAACGTATAGATTATAGGCATATGTAGGGAAA-AAAAATAG
GAGAAAG-CCCTCATGTTTATTTTCCTCCAAAATGC--TATGAAATTTTTC-TTTACCTGATTTCATAGGAACCATGATG
AGCACATCACAACATGGTCGCA--ATTTTTCCTATATGAATTTACTCATTCAAAGT--------------------TCTA
GACGCGGCCTAAGACCATATAGATGTTCTTCAGCCAAAGAACCATATAT--GTCATAATACATGGATCATTCTTTGATTC
TTGGGGTGATCCAACCGTTTGGAGGTCGTATGTTACCCTCAACATAAAATAGAGACATAAATTTGAAAA--TAAAATACC
TTGGTGGAGGTATGTTTTTACTGACAAACATAATCTTAAT-TACTATTAAACTGATCATTGGCCCATGAATTAACACTC-
--TAACTTATTTTGTTT-TAACCCGCAGGAAGGAACAATCTGGCAAGCCTACAAAAGCTACAAATAAATACTACAAAAAC
TCAAGCAAAGATGATCTAGTTTTAAGGGCGACACTGGACTCAATTACTAGAATTGGATAAAATTGCAATCCGGTGATGAA
AAGGAACATGTGAGTTTT-CTTACCTGGTATTT----TAGGCACAAATTATGACCTATGAAGTTTCCCGTTTG-------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr4B_771
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TATATAGTACTAAT-GCAGTCAGCAAGC
TCAACTTGACCGTACAGAATAGAAGTCTGAAACCGCTCCTACGTCAGGGTAAA-------GACCAAGAGGCAAATGGCCA
TGCTTTCACAAATGACAGTTGTGAAGCGGCACACTTCATGCCTGC--AAAAAAGCGTAAAAAAG-GTAATCAAGATAAAC
CAAAAAGCGCATACACCTAATCCGTAATTTTGTACTCGGATACAGTTCTTTAAATACAGCTGCATCCTGCAGCGCTCCCG
AGGCAGCAAACAACGACAAGCGGGTTAGAGAGAGAGAGGGAGAGAGAGAGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA-----------GAGGAGGACG--A--------------A
GGAGGAAGAAAGAGCAAGGATGGGTCAGAGCCCCCTTGTCCGGCTGCCGGTGGCGGAGCAGGTTCAGCCAGAGGTGGCGA
CCGGTGGCAGCAACAGGTGAT-TTTT---TTTCCGGAAAAGCTATGT-TTATTCACCAGAATCGGCTCTTGCCGCTAGCT
AATCACGTCTGCAGCTGCGGCTAATCGTAAAGTGAATAGATGAACTTATGAGGTGAGCTTCGTCATGTTTAATTCAGACA
-TGTGTGTGTGTGCGCTACTACTGTCTTTTATCAGGAAGAAAAA--AAGCGCAGTTGTTAGCTTTGAGAGCATCGGACGC
GCTATAT-------------------------------------------------------------------------
---------------------------------AGGTGTAGCTAAATTTATCGTTAGGATCACGTTAACCT-TTGTCAGT
GGG---AAAATCGACAACAAAATTAAAAGCCAAGTCCAATTTAGAAAG--------------------------------
---------------------------------------------------------------CACTGATCTTAAAAATA
CCACAATAGCTATATGTAAGTTGACTGAATTTGCAATTTGTATAAGTC--------AATTTTATGGGAGGAGAAACGATT
GGATGAGCAAGAAAGTT-GAGGAAGAAGAAAGAAGGCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GGTTGTTGGATCTTAATCTAAT
GATCCAGAAAACCGACTTACCCAAGATAAATTCTAAAAACACCTAGAAAATGAGATGTCATGTAAGAAGTCATAAATATA
CTTCACCGCCGGTTTAAAACTTCAG---ACACAAAGGAAAAATGTATGGATTATAGGCATATGTAGGGGGAGAAAAATAG
GAGAAAGCCCCTCATGTTTATTTTCCTCCAAAATGC--TATGG-AATTTTC-TTTACCTGATTTCATAGGAACCCGGATG
AGAACAACACAACATGGTCGCA--ATTTTTCCTATATGAATTTACTCATTCAAAGT--------------------TCTA
GACGCGGCCTAAG-CCATATAGATGCTCTTCAGCCAAAGAACCATATAT--GTCATAATACATGGATCGTTCTTTGATTC
TTGGGGTGATCCAACCGTTTGGAGGT------------------------------------------------------
--------TGTATGTTTTTACTGACAAACATAATCTTAAT-TACTATTAAACTGA--------------ATTAACACTCT
AAT---TTATTTCGTTT-TAACCCGCAGGAAGGAACAAACTGGCAAGCCTACAAAAGCTACAAATAAATACTACAAGAAC
TCAAGCAAAGATGATCTAGTTTTAAGGGCAACACTGGACTCAATTACTAGAATTGGATAAAATTGCAATCCGGTGATGAA
AAGGAACATGTGAGTTTT-CTTACCTGGTATTT----TAGGCACAAATTATGA---------------------------
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----------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---S----------------S--S
----S-----------------------S--------SS-----S--------------------S--------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
-----------------S---------------------S----------------------------------------
---S-------------------------------------------------------------S--------------
----------S-----------------S---------------------------------------------------
---------------------S--S-------------------------------------------------------
--------------S--S----------S-------S-----------------------S--------S-S-------S
-------------------------------------------------------------S----------------S-
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
-----------------------S--------------------------------------------------------
------------------------------S------------------S------------------------------
---------------------------------------------------------------S----------------
-------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
-------------------------------S--SSS--S-S-SS-SSSSSSSSSS----------S-------------
--------------S-------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------SSSSS-----------S------------------------------
----------------------SS--------------------------------------------------------
------------S-------------------S----------------------------------S------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
----------------S---------------------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------S------------------------------------------------
-------------------------------------------S------------------S-----------------
-----------------S--------------------S----------S------------------------------
-------S-------------------------------------------------S----------S-----------
-------S-------------------------------------------S---------------------SS-----
-------S------------S--------------S--------------------------------------------
------------------S----------------------------S-----------------------S--------
-----------------------S--------------------------------------------------------
----S----------------------------------------------------------S---S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------S-----------------------------S-----------------
--S---------------------------------------------------------------------S---S---
-------------------------------------------------S------------------------------
----S------------S-----------------------------------------------------------S--
--------------------------------SS------S------------------S--------------------
-----------------S------------------S-------------------------------------------
----S----------------S---------------------S---------------------S--------------
------------------------S---------------------------------
>forward_282
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AAACTAAGCCGACGACCAGG--------------------------------------
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----------------------------------------------------------
>reverse_1907
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------CAGGAGAAACGGTT
GGACGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>forward_1892
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--------------------------------GCCGATTTTGTGGGAGGAGA----------------------------
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----------------------------------------------------------
>reverse_4153
--------------------------------------------------------------------------------
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------------------------------------------------------------------------ACCTTGAG
CCCACATGTCG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
