>input_sequence_39571
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GCGCGCAGCGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGGTT
CCAGTTCCAGGGCCGCC------CTCTTCTGCTTCCTGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGT
AAGAGCAGGCGCTGCTCTTCTTTTCTT----------------------------TCGTTCGCTGCTGCATTTGTGATTC
GGTTCAGCTCTTCGGCCGGATCTGATCCGCGCGGTG---------------GTTCTTGTAATC---TAACCGCTTAGGAG
GATGGGCA-----TAGTGTAGGCGTATGGACTAGGAACCTGCTCCAGGCG-------AGGATGTTCGTCTGAATTTCATT
TTCAGTGGTACATAGCATCCTAATTCCTGAATTCTACTTAGCTTGCCGTTGCCTACCGATG-------TGCCGAGTTCTT
GGATGTCACTAAGCGGTTCTAGTGGGTTGCCTACCGTTGCCTATCGTCTGAGATCGGGTCTTCCAAGATCTCTTACTCTG
TTTTAGCTTCCATTTAGACACGATAATTAGTCAAATTGTTGCAGCACAGATA----------------------------
-----------------------------------AGATTCAGCATGCATGATCTGATGGTCAGGTCTCGTTGGTGAGCA
ATTGCAGTGTTCTTCTGTTCGCTCCAGCTGGTTGCTGGTGCTCGTGTTCGGTTGCTGG-----TGCTCATGTTCTGTTGC
AGGGCACGGTCGTGGCCACAAATGAACGGCTCGCTGTTTGAGTTGGTGA-------------------ACACAACGCTTA
ATTGGTACTCCCTCCGTAACAAAATGTGTAAGCCGTTTTTTATGCCCCGTGCAAAACCAAAAAAACGCCCTACATTTTGG
TACAGAGGTAGTACTATGATCTACTCCGTAGTAACTTATACTGGAAGAGTTATTCAGCAATAAAAAAACTTGGGAGTGCT
TTTGCTTCGTAGAAATCTGGGTACTCACTCACAAAATA------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
TGC--------TTTAGCCACAAAATGAAGAGAACTCTGCACCCATTGTTTTGATGCTGCAGCCTATCACCTTGTTGCCTG
CGCGATCCTTTGTGTGGGCGCGTTCATGTTTGATGTGCACATCCTAGTCGTGCAGAGGCCGAT-----TGTGTGCTCATT
GTGTTTGTATCCCCTCGATGCTTCATTACGAGCTAA--------------------------------------------
-----------------------TAAAACGCCCTTTATCGGGAAAAAAAGTCACCG-TGTAATTAAACTGCTTCCTTAAT
ACTGGTTACTGTTTT-CAGGGGAGGACAACCAGCTCCTCAAGGGGATCAACAGCTACAGAGCTTCACTCAAGGTCCCGGC
GCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGAGCAGCTAGCGAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCA
CCGGAGCCAACACCGTCCCCGGCACCGAGCCGCAGTTCCCCGACTACCCCCAGTTCCTCGACCGCTGCCACCTCAACGCG
TCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGCGTGCCCGGACTCGTGGCCGACGTTGTGCTGACCAACTACACCAA
GTCACAGTACAACCGGTTCCTCAACGACACCAAGTACTCCGGCGTCGGGATCGCCAACGAGGGGGACTGGGTGGTCGTCG
TGCTCAGCACCAGCACCGACTCCGGCGACTACTCCCCTGCTCCCCCGGGCTCCAACTGGGCTCCTTCGGTCCAGCCATTC
AGCTGGATGATTGTTTCGCTGGTAGGGTTCGTAGTTTTGCTGATGAAGTGAGAAGATAAATGTTGTGTTGCTCATCTCGC
GTGCTACACCGCTGCAAATGAGCGTGTTGATCTTATGCCCGTGTCAGTCGTTTCTGTATCTTTCAGATTGTCATTTCTAC
TCGGTCCAGTTGACACCACAGTACAGTAGCATATACATGCCGCGAGGTTCGGGATCAAAACTTTTTTTCTTCAGTATTTT
CCTTTGACCACAATTGGCAACGGCTTTGGG-ATATTGTGGTCAGGTGATGTGCATTATTGAACCACATCTTTCATCTTTG
AACATTTAGCTAAAGCCAGAACTTCAACTTT-GTTGGGTGTTGGCACTGTGCACTCAATTTCTTTTAACATCTGTACTGC
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr2A_1_TraesCS2A01G141900
TAAAGAACAAAGACTGCACTGACGCATTGAAGCTCGTGTGCTGTGAATTTGAGCCTTTCATGTTCCAGCAAAGGCTGAAT
CACCTCTTAAAGTTTGTGTTCAATGATGGCTCGGAGTTCATACAGACACACCTTCCTTTGAAGGAGAAGTGGTCTCGAGC
CTTCGACGTAGGGGGGTGCTAGGTAC-------------------GGCGACATGACGAGCAACATGACTAATCCTGACCG
GGCCCCCGTCCACTCATAGCCGTTGGAATCGGGACTAATACTCATATTAGTCCCGGGCCCAAACCCGACCGGAACTAGTG
CTTCGGATGAAAGATTAGTTTTCTACTAGTGCACTAGCTCCATACCATT-CTTCAATGCCAAAGCTTCCGTTGCAGC---
---------------GGCATCAAGCACATGTTGTTGACCCAGCAAGAGCCTCACCCCAGTGGTTTCAAAGAAGCGCTGCC
GTGGCTCCGCTTCCATCTTTCATGAAGTATGCATTCACGTTCATTTTATAAAGATAATCACG------------------
-----------ACTCGAATCCTCATCATATTTCAAATCGACGGTTTGAAATAGACCCGAACCTCTCG-AAACATCGGATG
GATTTGGTAGGAAGAAAAGGAGAAAGCAACACCGACGCCCTG-CGTTGAGCTGTCCGCCCGTCCCGGCGTCGGTCCGGTC
CGGTGGTACCAACTCAATGGAAAACCCGCGGTGCGCCGCTTTCTTAATTCGTTTGCTTCACGTAATCAATCTGCCACTGC
CGCGCACGTTGCCGGGCGCCTTTTATTAGTAGCGCACCGACAGTGTTAGTTAGGGATCTCTTTTCCTAC---CAAGAAAG
CGACGGCAGGTAAACCATTTTAACGCCGGCAGAAGAACACTTCCGTTAACAACAGCGCCGCTTTTACCTTTTAGGACAGA
GGAGTAAGCAAGTGCAGTGGCAGTGGTTGGCCGCAGACAGCAGCAGCTCGCCTCCTTCCTTCCTTCCTCCTCACTCCCCC
CTATATACCCGCCACCCTACCCGTCGG----AGGGTGCGCGCAGCGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGGTT
CCAGTTCCAGGGCCGCC------CTCTTCTGCTTCCTGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGT
AAGAGCAGGCGCTGCTCTTCTTTTCTT----------------------------TCGTTCGCTGCTGCATTTGTGATTC
GGTTCAGCTCTTCGGCCGGATCTGATCCGCGCGGTG---------------GTTCTTGTAATC---TAACCGCTTAGGAG
GATGGGCA-----TAGTGTAGGCGTATGGACTAGGAACCTGCTCCAGGCG-------AGGATGTTCGTCTGAATTTCATT
TTCAGTGGTACATAGCATCCTAATTCCTGAATTCTACTTAGCTTGCCGTTGCCTACCGATG-------TGCCGAGTTCTT
GGATGTCACTAAGCGGTTCTAGTGGGTTGCCTACCGTTGCCTATCGTCTGAGATCGGGTCTTCCAAGATCTCTTACTCTG
TTTTAGCTTCCATTTAGACACGATAATTAGTCAAATTGTTGCAGCACAGATA----------------------------
-----------------------------------AGATTCAGCATGCATGATCTGATGGTCAGGTCTCGTTGGTGAGCA
ATTGCAGTGTTCTTCTGTTCGCTCCAGCTGGTTGCTGGTGCTCGTGTTCGGTTGCTGG-----TGCTCATGTTCTGTTGC
AGGGCACGGTCGTGGCCACAAATGAACGGCTCGCTGTTTGAGTTGGTGA-------------------ACACAACGCTTA
ATTGGTACTCCCTCCGTAACAAAATGTGTAAGCCGTTTTTTATGCCCCGTGCAAAACCAAAAAAACGCCCTACATTTTGG
TACAGAGGTAGTACTATGATCTACTCCGTAGTAACTTATACTGGAAGAGTTATTCAGCAATAAAAAAACTTGGGAGTGCT
TTTGCTTCGTAGAAATCTGGGTACTCACTCACAAAATA------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
TGC--------TTTAGCCACAAAATGAAGAGAACTCTGCACCCATTGTTTTGATGCTGCAGCCTATCACCTTGTTGCCTG
CGCGATCCTTTGTGTGGGCGCGTTCATGTTTGATGTGCACATCCTAGTCGTGCAGAGGCCGAT-----TGTGTGCTCATT
GTGTTTGTATCCCCTCGATGCTTCATTACGAGCTAA--------------------------------------------
-----------------------TAAAACGCCCTTTATCGGGAAAAAAAGTCACCG-TGTAATTAAACTGCTTCCTTAAT
ACTGGTTACTGTTTT-CAGGGGAGGACAACCAGCTCCTCAAGGGGATCAACAGCTACAGAGCTTCACTCAAGGTCCCGGC
GCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGAGCAGCTAGCGAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCA
CCGGAGCCAACACCGTCCCCGGCACCGAGCCGCAGTTCCCCGACTACCCCCAGTTCCTCGACCGCTGCCACCTCAACGCG
TCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGCGTGCCCGGACTCGTGGCCGACGTTGTGCTGACCAACTACACCAA
GTCACAGTACAACCGGTTCCTCAACGACACCAAGTACTCCGGCGTCGGGATCGCCAACGAGGGGGACTGGGTGGTCGTCG
TGCTCAGCACCAGCACCGACTCCGGCGACTACTCCCCTGCTCCCCCGGGCTCCAACTGGGCTCCTTCGGTCCAGCCATTC
AGCTGGATGATTGTTTCGCTGGTAGGGTTCGTAGTTTTGCTGATGAAGTGAGAAGATAAATGTTGTGTTGCTCATCTCGC
GTGCTACACCGCTGCAAATGAGCGTGTTGATCTTATGCCCGTGTCAGTCGTTTCTGTATCTTTCAGATTGTCATTTCTAC
TCGGTCCAGTTGACACCACAGTACAGTAGCATATACATGCCGCGAGGTTCGGGATCAAAACTTTTTTTCTTCAGTATTTT
CCTTTGACCACAATTGGCAACGGCTTTGGG-ATATTGTGGTCAGGTGATGTGCATTATTGAACCACATCTTTCATCTTTG
AACATTTAGCTAAAGCCAGAACTTCAACTTT-GTTGGGTGTTGGCACTGTGCACTCAATTTCTTTTAACATCTGTACTGC
GCATTTAGTTTGTTATTGTTAGAGTATATTGGTGAAGCTGAGATGACTTGCGTTTTTT--CTTCTTTGCTAGGAGATAAC
TTGTGTGTTCGTAGCTCAGATTTTTTTTTCTTTCAAAAAGGAGGAATACCCCCGGCCGGCCTCTGCATCTCTTGATGCAC
ACAGCCATATGATTAAACGTCCAAGTTCAAAACAAGGTCTCAAAGAGTCTTACGGACCTCAAAGAAAGAACAAAATGATA
TGCCACAACCGGTGAGGCGA-----AAACAGATAAAGATGACTAAACAACTATTCTATTGTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATCGTGCAACCATCTTTCATCGGTTGCAACCC
AATATCCATAAAGCTCCATGTGGTCCACATGGCTGAATAAGGACCATGTAGGTATCCAAGCTGACGCCTTGAAGATAACT
TGCAAATTTTTTGTGATGGTTTGTCTGTTAAAGACAACATCATTCCGACAATTTCAAATGGCTCAAAGTAACGCACACAC
TCCTACTCAAATATGTGCCGTAGTTTTAGGCTTAATCCCGGTTAACCAAGTCCCAAATAAATGTGTATCCGAGACGGGCG
GAGCAACATTAAAGGATACGTGAATGATCCGCCATAGTAACTTTGCAAGTGGGCAAAGGAGAAACACATGTTCTATTGTT
TCGTCGTGATCACAAAAGCAACATCGTCTACTACCTTCCCAACTACGCT
>chr2B_1
TAAAGAACAAAGATTGCACTGACGCATGGAAGCTCGCGTGCTGTGAATTTGAGCCTTTCATGTTCCAACAAAGGCTGAAT
CACCTCTTGAAGTTTGTGTTCAATGATGGCTCGGAGTTCATACACACACACCTTCATTTGAAGGAGAAGTGGGCTCGTGC
CTTCGACGTAGGAGGTGCTAGGGACGGCCACATGACGAGCAACATGGCCATATGACGAGCAACATGACTAGTCCTGACCG
TGTCCCCGTCCGCTCCTAGTCGTTGGAATCGGGACTAATGCTCATATTAGTCCCGGGCCCAAACCCGACCGGGA-TAGTG
CTCCGGATGAAAGATCAGTTTTCTACTAATGGGCTAGCTCCATACCATT-CTTCAATGCCAAAGCTTCCGCTGCAGC---
---------------GGCATCAAGCACATGTTGTTGACCCAGCAAGAGCCTCACCGCAGTGGTTTCAAAGAAGCGTCGTT
GTGGCTCCGCTTCCATCTTTCATGAAGCATGCATCCACGCTCATTTTATACAGATAATCACGGTACTTGTATACCAGAAG
GTTTAAAATAGACTCGAATCCTCTTCATATTTCAAATCGACGGTTTGAAATAGACTCGAACCTCTTAGAAATACGGGATG
GACTTGGTAGGGAGAAAAGGAGGAAGCAACACCGACGCCCTGACGTTGAGCTGTCCGCGTGTCCCGGCGTCGGTCCGGTG
GTACCA----AACTCAATGGAAAACCCGCGATGCGCCGCTTTCTTAATTCGTTTGCTTCACGTAATCAATCTGCCACTGC
CGCGCACGTTGCCGAGCGCCTTTTATTAGTAGCGCACCGACAGTGTTAGTTAGGGATCTTTTTTCTTAATAACAAGAAAG
CGACGGCAGGTAAACCATTTTAACACCGGCAGAAGAACAGTTTCGTTAACAACAGCGCCGCTTTTACCTTTTAGGACAGA
GGAGTAAGCAAGTGCAGTGGCAGTGGTTGGCTGCAGACAGCAGC---TCGCCTCCTTC----CTTCCTCCTCACTCCCCC
CTATATACCTGCTACCCTACCCGTCGGTCGGAGGGTGCGCGCAGTGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGA--
----TTCCAGTTCCAGGGCCGCGCTCTTCTGCTTCCTGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGT
AAGAGCAGGCGCTGCTCTTCTTTTCTCTCCTTTCTTTGCGGCCCGATTCGCTCGCTCGCTCGCTGCTGCATTTGTGATTC
GGTTCTGCGCTCCAGCCGGATCTGATCCGCGCGGTGTGGATTTAGAGGTTGGTTCTTGTAATCTGGTAATCGCTTAGGAT
GATGAGCATAGTCTAGTGTAGCCGTATGGACTAAGAGCCTGCTACGGCCTACGAGCCAGGATGCTCGTCTGGATTTCGGT
GCCACATGACA-------------TCCTAGCTCCTAGTTGGTTTGCCGTTGGATGTCCATGTGCCGACTGCCGAGTTCTT
GGATGTCACTAAGCGGTTCTATTGGGTTGGTGA----------------GAGATCTGGCCTCCCAAGATCTCTTACTCTG
TTTTACCTTCGTTTGGGACATGGTAATTTGTCAAATCGTTCCAGCACACACGAGCTGATGCATCGTAGGCCGGGGAGTCC
CCCCTTTTCGAAAAAAAAAGGTTCCAGCACACACGAGATTCAGCATGCATGATCTGATGGTCACGTCTCGTTGCTGAGCA
ATTGCAGTGTTCT---GTGCGCTCGAGCT--------------------GGTAGCTGG-----TGCTCATGCTCTGTTGC
AGGGCACGGTCGTGGCCACAAATGAACGGGTCGCTGTTTGAGTTGGTGTCAAGTGTGCTAGGCACAAGACACACCGCTTA
GTTGGTACTCCGTCCGTAACAAAATGTGTAAGCCGTTTTTTATGCCCTGTGCAAAACCAAAAAAACATCTTACATTTTGG
TACAGAGGTAGTACTATGATCTA----------ACTTATACCGGAAGATTTATTTAGCAATAAAA-AACTTGGGAGTGCT
TTTGCCTCGTAGAGATCTGGTTACTCGTGAACGAAATACTCCCTCCGTCCCAAAATTCTTGTCTTAAATTTGTCTAAATA
CGGATGTATCAAGTCACATTTTAGTATTATATATATCCGTATCTAGACAAATCTAAGACAAGAATTGTCTAAATACAGAT
GTATCTAGTCACATTTTAGTATTATATACATCCGTATCTAGACAAATATAAGACAAGAATTTTGGGACGGAGGGAGTGGT
TGC--------TTTAGCCACGAAATGAAGAGAACTCTGCACCCATTGTTTTG------------ATCACCTTGTTGCC--
--CGATCCTTTGTGTGGGTGCGTTCATGTTTGATGTGTGCATGCTAGTCGTGCAGAGTCTGAA-----TGTGCGCTCATT
GTTTTTCCCCTTGTAATTAAACTCCTAGTCTTGCAGTGCAGACTCTGCATGCTAGTCGTGCAGAGTCTGAATGTGCGTTC
ATGTTTGATGTGTGAATGCTAATAAAAACGCCCTTTATCAGAAAAAAAAAGTCACCTTGTAATTAAACTGCTTGCTTGAT
ACTGGTGACTGTTTTTCAGGGGAGGACAACCAGCTCCTCAAGGGGATCAACAGCTACAGAGCTTCGCTCAAGGTCCCGGC
GCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGAGCAGCTAGCGAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCA
CCGGAGCCAACACCGTGCCCGGCACCGAGCCGCAGTTCCCTGACTACCCCCAGTTCCTTGACCGCTGCCACCTCAACGCG
TCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGCGTGCCCGGCCTTGTGGCCGACATTGTGCTGACCAACTACACGAA
GTCCCAGTACAACCAGTTCCTCAACGACACCAAGTACTCCGGCGTCGGGATCGCCAACGAAGGCGACTGGGTGGTCGTCG
TCCTCAGCACCAGCACCGACTCCGGCGACTACTCCCCTGCTCCCCCGGGCTCGAACTGGGCTCCTTCGGTCCAGCCGTTC
AGCTGGATGATTGTTTCGCTGGTAGGGTTTGTAGTTTTGCTGATGAAGTGAGAAGATCGATGTTGTGTTGCTCATATCGC
GTGCTACACCGCTGCAAATGAGCGTGTTGATCTTATGTCCGTGTCAATCGTTTCTGTATCATTCAGTTTTTCATTTCTAC
TTGGTCCAGTTGACAGCACAGTACAGTAGCATATGCATGCCACGAGGTTTGGGATCAA---TTTTTTTTTTCAGTATTTG
CCTTTGACCACAATTGGCAATGGCTTTATGCATATTGTGGTCAGATGATGTGCATTATTGAACCACATCTTTCATCTTTG
AACATTTAGCTAAAGACAGAACTTCAACTTTTGTTGGGTGTTGCCACTGTGCACTCAATTTCTTTTATT---TGTACTGT
GCATTTAGTTTGTTATTGTTAGAGTATATTGGTGAAGCTGCGATGACTTGCGTTTTTTTTCTTCTTTGAGAAGAGATAAC
TTGTGTGTTTGTAGCTCAGAT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr2D_98
--------------------------------------------------------------------------------
-----------------GTTCAATGATGGCTCGGAGTTCATACAGACACACCTTCCTTTGAAGGAGAAGTGGGCTCGCGC
CTTCGACGTAGGGGGTGT-TAGGTAC-------------------GGCCACATGACGAGCAACATGACTAATCGTGACCG
TGCT--CGTTCGCTCCTAGCCGTTGGAATTGCGACTAATGCTCATATTAGTCCCGGGTCCAAACCTGACCGGGACTAGTG
CTCCGGATGAAAGATCAGTTTTCTACTAGTGCGCTAGCTTCATACCATTTCTTCAGTGCCAAAGCTTCTGTTGCAGCGGC
ATCTTCTGTTGCAGCGGCATCAAGCACATGTTGTTGACCCAGCAAAAGCCTCACCCAAGTGGTTTCAAAGAAGCGCCGTG
GTGGCTCCGCTTCCATCTCTCATGAAGCATGCATCCACGTTCATTTTACAAAGATAATTACAGTACTTGTATACCAGATG
GTTTGAAATAGACTCGAATCCTCT---TATTTCAACTGGACGGTTTGAAATAGACTCGAAC-TCTCA-AAATATGGGATG
GACTTGGTAGGGAGAAAAGGAGGAAGCAACACCGACGCCCTGATGTTGAGCTGTCCGCCTGTCCCGGCGTCGGTCCGGTG
GTACCA----A-CTCCATGGAAAACCCGCGATGCGCCGCTTTCTTAATTCGTTTGCTTCGCGTAATCAATCTGCCACTGC
CGCGCACGTTGCCGGGCGCCTTTTATTAGTAGCACACCGACAGTGTTAGTTAGGGATCTTTTTTCTTAA---CAAGAAAG
CGACGGCAGGTAAACCATTTTAACACCGGCAGAAGAACACTTT-GTTAACAACAGCGCCGCTTTTACCTTTTAGGACAGA
GGAGTAAGCAAGTGAAGTGGCAGTGGTTGGCCGCAGACAGCAGCAGCTCGCCTCCTTCCTTCCTTCCTCCTCACTCCCCC
CTATATACCTGCTACCCTACCCGTCGG----AGGGTGCGCGCAGCGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGA--
----TTCCAGGGCCGCC------CTCTTCTGCTTCCTGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGT
AAGAGCAGGCGCTGCTCTTCTTTTCTT----------------------------TCGCTCGCTGCTGCATTTGTGATTC
GGTTCAGCTCTTCGGCCGGATCTGATCCGCGCGGTGTGGATTTGGAGGTTGGTTCTTGTAATC---TAACCGCTTAGGAT
GATGAGCA-----TAGTGTAGGCGTATGGCCTAGGAACCTGCTCCAGGCG-------AGGATGTTCGTCTGAATTTCATT
TTCAGTGGTACATAGCATCCTAATTCCTGAATTCTACTTAGCTTGCCGTTGCCTACGGATG-------TGCCGAGTTCTT
GGATGTCACTAAGCGGTTTCAGTGGGTTGGTGA----------------GAGATCTGGTCTTCCAAGATCTCTTGCTATT
TTTTACCTTCATTTGGGACATGATAATTACTCCAACTGTTCCAGCGCACACA----------------------------
-----------------------------------AGATTCAGCATGCATGATCTGATGGTCAGGTCTCGTTGGTCAACA
ATTGCAGTGTTCT---GTTCGCTCCAGCT--------------------GGTAGCTGGTACTCTGCTCATGTTCTGTTGC
AGGGCACGGTCGTGGCGACAAATGAACGGGTCGCTGTT-----------CAAGTGTACTAGGCACAAGACACACAGCTTA
ATTAGTACTATGATC-----------------------------------------------------------------
----------------------A----------ACTTATACTGGAAGATTTAGCAAT-----AAA-AACTTGGGAGTGCT
TTTGCCTCGTAGAATTCTGTTT-CTCACTCACAGCATA------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
TGCACTGCATGTTTAGACAGGAAATGAAGAGAACTCTGCATCCGTTGTTTTGATGCTGCAGCCTATTACCTTGTTGCCCG
CACGATCCTTTGAGTGTGCGCGTTGGTGTTGGCTGTGTGCATCTTAGTACTGCAGAGGAGGACGGGGGTGTGTGTTAATT
GTGTTTGTATCCCCTTGATGCTTCATTATGAGT-----------------------------------------------
-------------------TAATTAAACCACCCTTGATCGGGAAAAAAATCACCTTTG-----TAAACTGCTTGCTTGAT
ACTGGTTACTGTTT-TCAGGGGACGACAACCAGCTCCTCAAGGGGATCAACAGCTACAGAGCTTCGCTCAAGGTCCCGGC
GCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGAGCAGCTAGCAAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCA
CCGGAGCCAACACCGTGCCCGGCACCGAGCCGCAGTTCCCCGACTACCCCCAGTTTCTCGACCGCTGCCACCTCAACGCG
TCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGCGTGCCCGGCCTTGTGGCCGACATTGTGCTGACCAACTACACCAA
GTCCCAGCACAACCGGTTCCTCAACGACACCAAGTACTCCGGCATCGGGATCGCCAACGAGGGGGACTGGGTGGTCGTCG
TCCTCAGCACCAGCACCGACTCCGGCGACTACTCCCCTGCTCCCCCGGGCTCCAACTGGGCTCCGTCGGTCCAGCCGTTC
AGCTGGATGATTGTTTCGCTGGTAGGGTTCGTAGTTTTGCTGATGAAGTGAGAAGATCGGTGTTGTGTTGTTCATCTCGC
GTGCTACACCGCTGCAAATGAGTGTGTTGATCTTATGCCCGTGCCAATCATTTCTGTATTATTCAGA-TTTCATTTCTAC
TTGATCCAGTTGACACCACAGTACAGTAGCATATGCATGCCACGAGGTTTGGGATCAAAACTTTTTCTCTCGC-TATTTG
CCTTTGACCACAATTGGCAATGGCTTTATGCATATTGTGGTCAGGTGATGTGCAGTATTGAACCACATCTTTCATCTTTC
AACATTTAGCTAAAGCCAGAACTTCAAC-TTTGTTGGGTGTTGGCACTGTGCACTCAATTTCTTTTAACATCTGTACTGC
ACAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr2D_2998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACTGC
GCATTTAGTTTGTTACTGTTAGAGTATATTTGTGAAGCTGAGATGACTTGCGTTTTTT--CTTCTTTGCTAGGAGATAAC
TTGTCTGTTTGTAGCTCAGATTTTTTT--CTTTCAAAAAGGAGGAATACCCCCGGCCGGCCTCTGCATCTCTTGATGCAC
ATAGTTATATGATTAAACGTCCAAGTTCAAAACAAGGTCTCAAAGAGTCTTACGGACCTCAAAGAAAGGAAAAAATGATA
TGCCACAACCGGCGAGGCGAGGCGAAAATAGGTAAAGATGACTAAACAACTATCCTATTGTTGGACCGTCATCCAAACCG
GTTGTATG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TATCTCGTGCAACCATCTTTCATCAATTGCAACCC
AATATTCAT-AAGCTCCATGTGATCCACATGGCTGAATAAGGACCATGTAGGTATCCAAGCTGACGCCCTGAAGATAACT
TGCAAATTTT-TGTGATGGTTTGCCTGTTAAAGGCAACATCATTCCGACAATTTCAAATGGCTCAAAGTAATGCACACAC
TCATACTCAAATATGTGCCACAGTTTTAGGCTCAATCCCGGTTAACCAAGTCCCAAATAAATGTGTATCCGAGACGGGCG
GAGCAACGTTAAAGGATACATGAATGGTACGCCATAGTAACTTTGCAAGTGGGCAAAGGAGAAACATATGTTCTATTGTT
TCGTCGTGATCACAAAAGCAACAACGTCTACTACCTTCCCAACTACGCT
>SNPs
-------------S-------------S--------S------------------------------S------------
--------S---------------------------------------------------------------S----S--
---------------SSSS-----------------------------S-------------------------------
S----------S---S-----------------------S--------------------------------S-------
--S------------S----------------S-----------------------------------------------
----------------------------------------------------------------------------S-SS
---------------------------S------S---------------------------------------------
-----------------------S-------------------------------S----------S----S--S-----
--S--------S----------S------------------------------------S-------------------S
SSSSSSSSSS--------------------S-------------------------------------------------
-----------------------------------------------------------S-----S--S-----------
------------------------S-----------------S-------------------------------------
--------------------------------------------------------------------------------
---------S--S----------------------------------------------------------------SSS
SSSS----------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-------------------------------------------------------------------------------S
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------SSS-SSSSSSSSSSSSSSSS------S------------------------
-----S----SS--SS----S-------------------S-------S-S-----------------------------
--------------------------------------------------------------------------------
-------------SSS-------------SSSSSSSSSSSSSSSSSSSS---S---------------------------
-----------------------------S------------------S------------------------S------
-----------S-----------------------------------S------------------SS-S----------
-----------------------SSSSSSSSSS---------------S-----S----------S--------------
-----S--------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S---------------------------------------------------------S-
-S-----------------------------------SS--------------------S--S-----------------
---------------S------------S---SS-S--------------------------------------------
-------------------------------------------------SSSS--S-----------------S---S--
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------S--S---------S----------------------
---S----------------------------------------------------------------------------
-S--------------------------------------------------------------------------S---
---------------------------------------------------------SS---------------------
----------------------------------------------S-------------S--------S----------
-S--------------------------------S------S-------S-----------------------------S
--------------------S------SS---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------------SS---------------------------------------------------
-S--SS--------------------------------------------------------------S-S---------
------------S---------------S--S---------------------S--------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------------------SS---------
-----S---S------------S---------------------------------------------S-----------
----------S------------S---------S-------------------------------------S--------
--S----------------SS-----------S-----------------------------------------------
-------S-----------S------S-S-------------------------------------S-------------
-----------------------S-------------------------
>forward_479
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGGTTTCAAAGAAGCGCTGC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_1813
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TGCTGGTGCTCATGTTCTGT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_1790
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCTTCTGTTCGCTCCAGCTG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_3322
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------GCGAGGTTCGGGATCAAAAC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_2402
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CTATCACCTTGTTGCCTG
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_4170
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------AAAGCTCCATGTGGTCCACA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
