>input_sequence_39561
--------------------------------------------------------------------------------
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-------------------------------------------------------------------ATGGCTATATCAC
CAGCCCCAGCTCCAAGCCCCTCATTGCACAGAAAAAAGCACCTGCCCGCCATGGGGGAATGCAAGAGCTCCCGGCGCACC
TCGCGCCCTCTCCTCCTCCCCGCCATTGTTGTCGTGCTCGCATTCTTCGTCGCGCAATGCGGTATGTATGCTCCTGCTTC
TCT-CATCGATCTTATACACTTCTTCCCTAGCATGTGTAGAGGACGCACACTTGAGTTTAAATTTTGTGTGTTTGCCACC
TTCACCCCTCAAC-AAAATTTTGCTTCCACTTGCTGCGAAA--------GAGTTTCACGCCGAAGTTTGCTGAAATTTAT
GCCAATTCTTACTGACAATGCTTTGTATGTTCAAATTCGGTTGATCT---TAGC-----ATGCTAACAGGTTGATCTTAC
TGAAATTTTGCTCACACTTGCTGAGAAATATGTGCAAATTTAGTAAAATTAACTTGACAAAACACTAACGACTGTCACAC
TGACTGATGGGTTTTGTTGGGTGCACAAGCAGGAGCGAGGGTGCTGACGGTGGACGAGCTGCTGGACCAGTACTCCGAGT
CCGACCACCACTCCGCCTCTCCGCCTCCGGGCTCCCCCGGCTGCGCCCCGGAGCCGGAAGCGTCGCCGCCGCCCGTCATC
CCGGCGCCCTCCTTCGCCTATCTCTCGCCCCCGCCGCCCATGCAGTTCTACTCCCCTCCGCCCCCCGAGGTCGTGCCCAG
CCCGCCTGAGATCACGCCGAGCCCGCCGGAGGTCGT------------------------------------------GC
CTAGCCCGCCTGAGATC---------------------------------------------------------------
------------------------------------------GCGCCACTGCCGCCGGTCGTTGCGCCCAGCCCGCCTGA
GATCGCGCCACTGCCGCCAGTCGTCGCGCCCAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GTGTACCCGAGTCCACCGGAGGT
TGCGCCCAGTCCACCGGAGGTCGCACCGCTCCCGGGGCCACCAGAGGTCACGCCTAGCCCGCCGGAGGTCGCGCCGTTCC
CAGGGCCACCAGAGGTCACACCCAGCCCACCGGACGTGACGCCATTCCCGGGGCCACCGGAGGTCGAGCCCAGCCCGCCG
GACGTGACGCCGTCCCCGGGGCCACCGGAGGTCGAGCCCAGCCCGCCGGACGTGACGCCGTCCCCGGGGCCACCGGAGGT
GACTCCCAGCCCACCGGAGGTCACACCGTTCCCGGGGACACCGTACGTGGCGCCCAGCCCACCGGAGGTGACGCCGTTCC
CGAGCCCGCCGGAGGTGACCCCCAGCCCGCCAGACTACGCGCCGTACCCGCCGCCGGAGTCCTCGCCGGG------GT--
----------CGGGGTCGTCCCCGAGCCCGCCGGGGGGCAGCTTCCAGCCACCGGTGGTGCTCCCGCCGACGACCGGGCC
GCCGTCGCCGTCGGCGGGGCACGGCGAGTGGTGCGTGGCGAAGCCGTCGGTGCCGGCGGCGATCGTGCAGCAGGCCATGG
ACTACGCGTGCGCTTCGGGCGCCGACTGCGAGTCCCTCCAGGCCGACGGCGCCTGCTTCAAGCCGGACACCATGACCTCC
CACGCCTCCTACGCCTTCAACAGCTACTGGCAGCGCGCCAAGTCCACCGGCGCCACCTGCGACTTCGGCGGCACCGCCAT
GCTCATCACCAAGGACCCCAGTAAGCCACATCACCTCACCTCCTTCAACCCCATTGCCATCTTCCATTCTTCTTTGCTCT
TCTTGTGATTGAGTGATGCTGTAACCA------------TTTCTTGATCTTCCTTTCCAGGCTATGATAACTGCCATTAC
AGTGTGATGTGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr5B_1_TraesCS5B01G366600
TGTTCAGTAAACAGCTTGATGCGATTCACCAACGGGCTCACCCGTGCATCCGTAGGAGGGACGCCGTGCAATCGGTGATC
CTGGATCCCCCCTGTTGTTGATCTACTTAGTTAGTGACTGGAGCTACTGCAGTTGAAAGATTGTATTGGTCTGACTTGG-
AGATTTTGGCTCAACATCATTTGTGTCCTGTCTATTCGTGTCGTGAGTGGAAACCTGTGAGACCTAGAAGTCATTTGTTC
CGTTGTCGATTGACTGATGATATGAGAGTATCGTCAGCTCTGTAAACCCGAGGATGAAATTAGCAGTGTCTTTTCACCAG
CTGTGCTGCTGTTGAGTACCATTCGTTGTTAGCACCGTCGTTTTGCCTTCG-GCGCCGTGATCGTGTGTCCATGGCTAGC
AAAAGCAAAAGAGGTGTTGCTTGTTTCAGCAAATTTCTCAAAGGGAATGCAATTCTTCTCTCCGGTACCACTCGTCTGTT
CCTTTTACCTTTCGCAACGATCTGAGATGCCGCCTGTCTGCTGCTTTACGCCGATCTGAGAT-----------GCCCTTT
TAATTTGCCGCAAATTTGAACTTTCTGAGAATGCTAGGACGTGCAAACTATGCCATAAATAAGGTAAGATCCTTGCGTGC
ATGAACACATTCTACAACATTACACGGATGCCGACCTGTGTGTGGGGTGGGGACGTATGTTGAGTGGATCCCAAGCAAAC
GAGGAGGAAAAAGGAGCCATG----------GAGTCGGCCGGAGGACCCTCCCCGCGTCTCTCCGTCTCCGGGCAAGCAG
CGAGCAAGCAAAGCATCTGTGCCAAGACTGCCAAAGGAGAAAAGAACCTCAAACCCACCAACGAATCCAATCATTCCCAT
GCTCTGCCTCTGCCTCTTCCTCAGTGTGTAGTACCAAACACACCCTAAAG----CTCACTCTTTCACTTCACTGGATTCT
GCTAGTAGCTTTGCTGCATTTGCAATGTCATCTCCTTTAACCTTTAACCTTTGCACAGCCATGCTCCATGGCTATATCAC
CAGCCCCAGCTCCAAGCCCCTCATTGCACAGAAAAAAGCACCTGCCCGCCATGGGGGAATGCAAGAGCTCCCGGCGCACC
TCGCGCCCTCTCCTCCTCCCCGCCATTGTTGTCGTGCTCGCATTCTTCGTCGCGCAATGCGGTATGTATGCTCCTGCTTC
TCT-CATCGATCTTATACACTTCTTCCCTAGCATGTGTAGAGGACGCACACTTGAGTTTAAATTTTGTGTGTTTGCCACC
TTCACCCCTCAAC-AAAATTTTGCTTCCACTTGCTGCGAAA--------GAGTTTCACGCCGAAGTTTGCTGAAATTTAT
GCCAATTCTTACTGACAATGCTTTGTATGTTCAAATTCGGTTGATCT---TAGC-----ATGCTAACAGGTTGATCTTAC
TGAAATTTTGCTCACACTTGCTGAGAAATATGTGCAAATTTAGTAAAATTAACTTGACAAAACACTAACGACTGTCACAC
TGACTGATGGGTTTTGTTGGGTGCACAAGCAGGAGCGAGGGTGCTGACGGTGGACGAGCTGCTGGACCAGTACTCCGAGT
CCGACCACCACTCCGCCTCTCCGCCTCCGGGCTCCCCCGGCTGCGCCCCGGAGCCGGAAGCGTCGCCGCCGCCCGTCATC
CCGGCGCCCTCCTTCGCCTATCTCTCGCCCCCGCCGCCCATGCAGTTCTACTCCCCTCCGCCCCCCGAGGTCGTGCCCAG
CCCGCCTGAGATCACGCCGAGCCCGCCGGAGGTCGT------------------------------------------GC
CTAGCCCGCCTGAGATC---------------------------------------------------------------
------------------------------------------GCGCCACTGCCGCCGGTCGTTGCGCCCAGCCCGCCTGA
GATCGCGCCACTGCCGCCAGTCGTCGCGCCCAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GTGTACCCGAGTCCACCGGAGGT
TGCGCCCAGTCCACCGGAGGTCGCACCGCTCCCGGGGCCACCAGAGGTCACGCCTAGCCCGCCGGAGGTCGCGCCGTTCC
CAGGGCCACCAGAGGTCACACCCAGCCCACCGGACGTGACGCCATTCCCGGGGCCACCGGAGGTCGAGCCCAGCCCGCCG
GACGTGACGCCGTCCCCGGGGCCACCGGAGGTCGAGCCCAGCCCGCCGGACGTGACGCCGTCCCCGGGGCCACCGGAGGT
GACTCCCAGCCCACCGGAGGTCACACCGTTCCCGGGGACACCGTACGTGGCGCCCAGCCCACCGGAGGTGACGCCGTTCC
CGAGCCCGCCGGAGGTGACCCCCAGCCCGCCAGACTACGCGCCGTACCCGCCGCCGGAGTCCTCGCCGGG------GT--
----------CGGGGTCGTCCCCGAGCCCGCCGGGGGGCAGCTTCCAGCCACCGGTGGTGCTCCCGCCGACGACCGGGCC
GCCGTCGCCGTCGGCGGGGCACGGCGAGTGGTGCGTGGCGAAGCCGTCGGTGCCGGCGGCGATCGTGCAGCAGGCCATGG
ACTACGCGTGCGCTTCGGGCGCCGACTGCGAGTCCCTCCAGGCCGACGGCGCCTGCTTCAAGCCGGACACCATGACCTCC
CACGCCTCCTACGCCTTCAACAGCTACTGGCAGCGCGCCAAGTCCACCGGCGCCACCTGCGACTTCGGCGGCACCGCCAT
GCTCATCACCAAGGACCCCAGTAAGCCACATCACCTCACCTCCTTCAACCCCATTGCCATCTTCCATTCTTCTTTGCTCT
TCTTGTGATTGAGTGATGCTGTAACCA------------TTTCTTGATCTTCCTTTCCAGGCTATGATAACTGCCATTAC
AGTGTGATGTGAAGAACAGAACAGCCTCC--------CAACAGATGCCATCAGTGGCGTATGGTTCTGGAAGCTGGACAC
CATTTTCTGCTCAAGTTCAGATGAAGTAGTGCAGATATACATACAGATATATATACATG----TAGGCTGTTTTGAATGT
GAGCATGTTCATTTTGTGAATGTACCCATCTAACTTTTGCTTCCTTTTGACACATATATTGTTTTGTATAATTCAGAATA
ATGCTATATGTAATGTAATTTTCCATCCTCATGAATTTCATGATCGCGACCACGTTCGTCAGTTCATAAGTCTCTGACAA
AGGCTTCGCTAACTTGAACATGAACAGAAGTGATCACCGAGAACTATTTGACCGA--TCGACAGACTAAAGAACCAGATG
ATACGATATTGTTTGACATGAT---------GATCACGCTCCTCGAGCCTTTATTGCTAAGTTCAATTTACGTAATGCGC
GCACAAAATCAACCGAACAGTCGTCTCTTCG--ACACACACATAAAACATGTATGGTACGTGCTGCCACGCCCTTGCTCA
GGCTGGAACTTCGTCGCAAGAAGGGTATGTCTGCAGAACGTAAACCGGGTCGCCGACTTTCACGACCCTCCCTTTGCCCT
TTGCTGACACCGACTCCTTGCAGACCAGATTTTGCCCAAAGTAGACCTGCAAAATAAGAGAGGTTAACT-------AACA
GCTTGTTCTTCTACTCTTGAAGGTAGCAAGAGTAGAGTAGGTTGAAGGGGGCAATTAATTACCTTGTGTTTATTCTCGTG
GCTCGGACGGAGCACTTCACCGGACCGGAATGTCAGCATAGTTTCTGTTGGTTCGGTGCC---AAGCATTCCGTTCTCTT
GGTTAACAGTAGGCACCTGAATCAGCAAATACATAAACTAAGCATAATATAGAGTACGTACTCTTATTTATATTG-----
-CCTTGTGAATAA--AGTGTGCACAGCATGCTATTGAATTCTGGTCGTAACGAACAAGTTCATAATTATCAGTATTGTGA
AACCTATGCGCATCA
>chr5D_1
TGTTCAGTAAACAGCTTGATGCGATTCACCAACGGGCTCACCCGTGCATCCATGGGAGGGACGCCGTGCAATCGGTGGTC
CTGGATCCCCCCTGTTGTTGATCTACTTAGTTAGTGACTGGAGCTACCGCAGTGGAAAGATTGTGTTGGTCTGACTTGG-
AGATTTTGATTCAACATCGTTTGT--CCTGTCTTTTCGTACCGAGAGTGGAAACCTGTTAGACCTAGAAGTCATTTGTTC
CGTTGTCGATTGACTGACGATATGAG--TATCTTCAGCTCTGTAAACCTGACGATGAGATTAGCAGTGTCTTTTCAGCGG
CTGTGCTGCTGTTGAGTACCATATGTTGTTGGCACCGTCATTTTGCCTTCC-GCAGCGTGATCATGTATCCATGGCTAGC
AAAAGCAAAAGAGGTGTTGCTTGTTTCAGCAAATTTCTCATAGGGAATGCAATTCTTCTCTCCGGTACTACTCGTCTTCT
CTCTTTACCTTTCGCAACGATCTGAGATGCCCCCTGTCTGCTGCTTTGCGCCGCTCTTTTGAACTAATCTCGCGCCCTTT
TAATTTGCCGCAAATTTGATCTTTCTGAGAATGCTAGTACGTGCAAATTATGCCA---------------CCTTGCGTGC
ATGAACACATTCTACAACATTACACAGATGCTGACTTGTGTGTGGAGTGGGGAAGTATGTTGAGTGGATCCGAAGCAAAA
GAGGAGGAAAAAGGTT---------------GAGTCGGCTGGGGGATCCTCCCCGCTTCTCTCTGGGC-------AGCGG
CTAGCAAGCAAAGCATCTGTGCCAAGACTGCCAAAGGAGAAAAGAACCTCAAACCCACCAACGAATCCAATCATTTCCAT
GCCCTGCCTCTGCCTCTGCCTCAGTGTATACCAAACACTAAAGCTCACTCGTCCCTCACTATTTCACTTCACTGGATTCT
GCTAGTAGCTTTGCTGCATTTGCAATGCCTCCTCCTTTAACCTTTAACCTTTTCACAGCCATGCTTCATGGCTATATCAA
CAGCCCCAGCTCCATTCCCCTCATTGCACAGAAAC--------GCCGGCCATGGGGGAATGCAAGAGCTCCCGACGCCCC
TCGCGCCCTCTCCTCCTCTCCGCCATTGTTATTGTGCTCGCCTTCTTTGTCGCGCAATGCGGTATGTATGCCACTGGTTC
CTTCCATCCATCTTACACACTTCTTCCCTAGCATGCGTAGAGGACGTACACTCGAGTTCAATTTCTGTGTGTTTGCCACC
TTCACCCCTCAACAAAAAATTTGCTTGCACTTGCTGCGAAATGTGTGCGGAGTTTTATGCCAAATTTCGCCGAAATGTAT
GCCGGTTCTTAGTAACAATGTTGTGTATGTGCAAATTCGGTTCATCT---TTAGTAGCAATGCTAACGGGTTGATATTAC
TGAAATTTTGCTCACGCTTGCTGCGAGATTTGTGCAAATTCAGTCT-------------------------------CAC
TTATTGAT-GGTTTTGTTGGGTGCACAAGCAGGAGCGAGGGTGCTGACGGTGGACGAGCTGCTGGACCAGTACTCCGAGT
CCGACCACCACTCGGCCTCCCCGCCTCCGGGCTCCCCCGGCTGCGCCCCGGAGCCGGAAGCGTCGCCGCCGCCCGTCATC
CCGGCGCCCTCCTTCGCCTACCTGTCGCCCCCGCCGCCCATGCAGTTCTACTCCCCTCCGCCGCCGGAGGTCACGCCCAG
CCCGCCTGAGGTCACGCCGAGCCCGCCGGAGGTCGCGCCCAGCCCGCCGGAGATCGCGCCACTGCCGCCGGTCGTCGCGC
CTAGCCCGCCTGAGATA---------------------------------------------------------------
------------------------------------------GCGCCACTGCCGCCGGTGGTCGCGCCCAGCCCGCCGGA
GATCGCGCCAATGCCGCCGGTGGTCGCGCCCAGTCCGCCCGAGATAGCACCACTGCCGCCGGTCGTCGCGCCCAGCCCGC
CGGACATCGAGCC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GTTCCCGAGCCCTCCGGAGGTGACGCCGCTGCCCCCGATAGTGTACCCGAGTCCACCGGAGGT
TGCGCCCAGTCCACCGGAGGTCGCACCGTTCCCGGGACCACCCGAGGTCACGCCCAGCCCGCCGGAGGTCGCGCCGTTCC
CAGGGCCACCAGAGGTCACGCCCAGCCCACCGGACGTGACGCCATTCCCGGGGCCACCGGAGGTCGAGCCCAGCCCGCCG
GAAGTCGA------------------------------------------------GCCGTCCCCGGGGCCACCGGAGGT
GACTCCCAGCCCACCCGAGGTCACGCCGTTCCCAGGGACACCGTACGTGGCGCCCAGCCCGCCGGAGGTCACGCCGTTCC
CGAGCCCGCCGGAGGTGACCCCCAGCCCGCCGGACTACGCGCCGTACCCGCCGCCGGAGTCCTCGCCGGG------GTCG
GGGTCGGGATCGGGGTCCTCCCCGAGCCCGCCGGGGGGCAGCTTCCAGCCGCCGGTGGTGCTCCCGCCGACGACCGGGCC
GCCGTCGCCGTCGGCGGGGCACGCCGAGTGGTGCGTGGCGAAGCCGTCGGTGCCGGCGGCGATCGTGCAGCAGGCCATGG
ACTACGCGTGCGCGTCGGGCGCCGACTGCGAGTCCCTCCAGGCGGACGGCGCCTGCTTCAAGCCGGACACCATGACGTCC
CACGCCTCTTACGCCTTCAACAGCTACTGGCAGCGCGCCAAGTCCACCGGCGCCACCTGCGACTTCGGCGGCACCGCCAT
GCTCATCACCAAGGACCCGAGTAAGCCACATCATCTCACCTCCTTCAACCCCATTGCCATCTTCCATTCTTCTTCGCTCT
TCTTGTGATTGACTGATGTTGTAGCCACTAATTTCTTGCTTTCCTCATCTTCCTTTCCAGGCTATGATAACTGCCATTAC
AGTGTGATGTGAAGAGCAAACAACCTCCCCACAGATGCAACAGATGCCATGAATGGTGTATGATTTTGGAAGCTGGACAC
CATTTTCTGCTCAAGTTCAGAGGAAGTAGTGCAGATATACATACAGATATATATACATGCATGTAGGCTGTTTTGAATGT
GAGCATGTTCATTTTGTGAATGTACCCATCTAACTTTTGCTTCCTTTTGACTCATAT--TATTTTGTATAATTCTGAATA
ATGCTATATGTAATGTAATTTTCCATCTTAATGAATTTCATGATGGCGACCTCGATTGTCAGTTGATAAGTCTCTGACGA
AGGCTTCGCTAACT-------GAACATCAGTGACCACTGAGAAGTGTATTATACCGTTCGACAGACTAAAGAACCAGATG
GTATGATATTGTTTGACATGGAGGGCATGACGATCATGCTCCTCGAGCTTTTATTGCTAAGTTCAATTTACGTAATGCGT
GCACAAAATCAATTGACCGGTAATCTCTTCGACACACACACATAAAACAGATATGGTAGGTGCTACCATGGCCTTGCTCA
GGCTGGAACTTCGTCGGAACAAGGGTATGTCTGCAGAACGTAAACCGGGTCGCCGACCTTGACGATCCTCCCTTTGCCCT
TTGCTGACACCGACTCCTTGCAGACCAGGTTTTGCCCAAAGTATACCTGCAAAACGAGATAAAAATGCGAGTGGTCAACG
GCTTGTTCTACCACTA-----------AC-AGTACAATGGGTTGAAAGGGACTATTAGTTACCTTCTGTTTATTCTTGTG
GCTCGGGCGGATCACTTCACCGGACCGGAATGTCAGCATGGTTTCTGTTGGTTCGCTGCC---AGGTATTCCGTTCTCTT
GATTAATGGTAGGCACCTGAATCAGCAAACAGAGAAACTAAGCATA-----GAGTACATACTCCTATATATATAAATATT
ACCTTGTGAATGTTTAGTGTGCACATCATTCTACTGAATTATGGTGGT--------------------------------
---------------
>chr5A_2
-GTTCAGTAAACAGCTTGATGCGATTCACCAACGGGCTCACCCGTGCATCCATAGGAGGGACGCCGTGCAATCGGTGATC
CTGGAT-CCCCCTGTTATTGATTTACTTAGTTAGTGACTTGAGCTACTGCAGTTGAAAGATTGTGTTGGTCTGACTTGGG
AGATTTTGATTCGACATCATTTGT--CCTGTCTTTTCGTATCGAGAGTGGAAA----TTAGACCTAGAAGTCATTTGTTC
TGTTGTCGAATGACTGACGATATGAG--TATCTTCAGCTCTGTAAACCTGAGGATGAAATTAGCAGTGTCTTTCCACCAG
CTGTACTGCTGGT-AGTACCATATGTTGTTAGCACCATTATTTTGCCTTACAGCAGCGTGATCGTGTATCCATTGTTAGC
-AAAGCAAAAGAGGTGTTGCTTGTTTTAGCAAAT--------------GCAATTCTTCTCTCCGGCACTACTCATCTTTT
CTCTTTACCTTTCGCAACGATCTGAGATGCCGCCTGTCTGCTGCTTTGCGCCGCTCTTTTGAACTAATCTCGCGCCCTTT
CAATTTGCCACAAATCTGAACTTTCTGAGAATGCTAGTACGTGCAAATTATGCCATAAA-----TAAGATCCTTGCGTGC
ATGAACACATTTTACAACACCACACAGATGCTGACTTGTGTGTGGAGTGGGGACGTATGTTGAGTGGATCCCAAGCAAAT
GAGGAGGAAAAAGGAGCCATGAAGTCGGCTGGAGAAGGGAGGAGGATCCTCTCCATTTCTCTCTGGGC-------AGCAG
CTAGCAAGCAAAGCATCTGTGCCAAGACTGCCAAAGGAGAAAAGAACCTCAAACCCACCAAGGAATCCAATCATTTCCAT
GC-----CTCTGCCTCTGCCTCAGTGTATACCGAACACTAAAGCTCAATCGTCCCTCACTATTTCACTTCACTGGATTCT
GCTGGTAGCTTTGCTGCATTTGCAATGCCTCCTCCTTTAACCTTTAACCTTTGCACAGCCATCCTCCGTGGCTATATCAA
CAGCCCCAGCTCCATTCCCCTCATTGCACAGAAAC--------GCCGGCCATGGGGGAATGCAAGAGCTCCCG-------
--GCGCCCTCTCCTCCTCGCCGCCATTGTTGTCGTGCTCGCCTTCTTCGTCGCGCAATGCGGTATGTATGCCCCTGGTTC
CTTTCATCCATCTTACACACTTCTTTCCTAGCATGTGTAGAGGACGCGAGCTTGAGTTTAACTTTGGTGTGTTTGCCACC
TTCACCCCTCA-C-AAAATTTTGCTCGCACTTACCGGAA-------------TTTTACGCCAAATTTTGCTGAAATTTAT
GCCAATTCTTACCGACAA----TTGTATGTGCATTTTCGGTTCATCTTAGTAGC-----ATGCTAATAGGTTGATATTAC
TGAAATTTTGACCGCACATGCTGCGAAATTTGTACAAATTAAGTTAAATTAGCGTAAGAAAACACTAAC----GTCACAC
TGATTGAT-GGTTTTGTTGGGTGAACAAGCAGGAGCGAGGGTGCTGACGGTGGACGAGCTGCTGGACCAGTACTCCGAGT
CCGACCACCACTCGGCCTCTCCGCCTCCCGGCTCCCCCGGCTGCGCCCCGGAAGCA------TCGCCGCCGCCCGTCATC
CCGGCGCCGTCCTTCGCCTACCTGTCGCCGCCGCCGCCCATGCAGTTCTACTCCCCTCCGCCCCCCGAGGTCGTGCCCAG
CCCGCCTGAGGTCACACCAAGCCCGCCTGAGATCGT------------------------------------------GC
CGAGTCCGCCTGAGATCACGCCGAGCCCGCCTGAGATAGCGCCACTGCCGCCGGTGGTCGCGCCCAGCCCACCGGAGATT
GCGCCGCTGCCGCCGGTGGTCGCGCCCAGCCCACCGGAGATTGCGCCGCTGCCGCCGGTGGTCGCGCCCAGCCCGCCGGA
GATCGCGCCGCTGCCGCCGGTGGTCGCGCCCAGCCCGCCCGAGATCGCGCCACTGCCACCGGTCGTCGCGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGTTCCCGAGCCCTCCGGAGGTGACGCCGCTCCCGCCGATAGTGTACCCGAGTCCACCGGAGGT
TGCGCCCAGTCCACCGGAGGTCGCACCGCTCCCGGGGCCACCAGAGGTCACGCCTAGCCCGCCGGAGGTCGGGCCATTCC
CAGGGCCACCAGAGGTCACGCCCAGCCCACCGGACGTGACGCCATTCCCTGGGCCACCGGAGGTCACGCCCAGCCCGCCG
GAAGTCGA------------------------------------------------GCCGTTCCCGGGCCCACCGGAGGT
GACTCCCAGCCCACCCGAGGTCACGCCGTTCCCGGGGCCACCGGAGGTGACTCCCAGCCCGCCGGAGGTCACGCCGTTCC
CAAGCCCGCCGGAGGTGACCCCCAGCCCGCCAGACTACGCGCCGTACCCGCCTCCGGAGTCCTCACCGGGGTCCGGGT--
----------CGGGGTCGTCCCCGAGCCCGCCGGGGGGCAGCTTCCAGCCGCCGGTGGTGCTCCCGCCGACGACCGGGCC
GCCGTCGCCGTCGGCGGGGCACGCGGAGTGGTGCGTGGCGAAGCCGTCGGTGCCGGCGGCGATCGTGCAGCAGGCCATGG
ACTACGCGTGCGCGTCCGGCGCCGACTGCGAGTCCCTCCAGGCGGACGGCGCCTGCTTCAAGCCGGACACCATGACGTCC
CACGCCTCCTACGCCTTCAACAGCTACTGGCAGCGCGCCAAGTCCACCGGCGCCACCTGCGACTTCGGCGGCACCGCCAT
GCTCATCACCAAGGACCCGAGTAAGCCACATCACCTCCTCTCCTTCAACCCCATTGCCATCTTCCATTCTTCTTTGCTCT
TCTTGTGATTGACTGATGCTGTAACCA------------TTTCTTGATCTTCATTTCCAGGCTATGATAACTGCCATTAC
AGTGTGATGTGAAGAGCAG--------------------------------AGTGGTGTATGGTTTTGGAAGCTGGACAC
CATTGTCTGCTCAAGTTCAGAGGAAGTAGTACAGATATACATACAGATATATA------CATGTAGGCTGTTTTGAATGT
GAGCATGTTCAGTTTGTGAATGTACCCATCTAACTTTTGCTTCCTTTTGACACATAT--TGTTTTGTATAATTCTGAATA
ACGCTAT-------GTAATTTTCCATCTTCATGAATTTCATAATGGCAACCACGTTCGTCAGTTGACAAGTCTCTGACGA
AGGCTTTGCTAACT-------GAACATCAGTGACCACTGAGAACTACTCCCTCCTCC-----------------------
--------------------------------------CTCCTCGAGCTTTTATTGCTAAGTTCAATTTATGTAATGCGT
GCACAAAATCAACCGACAGGTCGTCTCTTCA--ACACACACATAAAACAGGGTATAAAACAACA--CATGCCCTTGCTCA
GGCTGGAACTTCATCGGAAGAAGGGTATGTCTGCAGAACGTGAACCGGGTCGCCGACCTTGACGATCCTCCCTTTGCCCT
TTGCTGACACCGACTCCTTGCAGACCAGGTTTTGCCCAAAGTATACCTGCAAAACGAGATAAAAATGCGAGCGGTCAACG
GCTTGTTCTACTACTA-----------AAGAGTACAATAGGTTGAAAGGGGCTATTAGTTACCTTCTGTTTATTCTTGTG
GCTTGGACGGATCACTTCACCGGACCGGAATGTCAGCATGGTTTCTGTTGGTTCGGTGCCGCCAGGTATTCCGTTCTCTT
GATTAATGGTAGGCACCTGAATCGGCAAACAGAGAAACTAAGCATA----------------------------------
--------------------------------------------------------------------------------
---------------
>SNPs
---------------------------------------------------S----------------------------
----------------------------------------------------------------S---------------
--------SS--------------SS-------S-----S---S--------------S---------------------
-----------------S--------SS----S---------------S-------------------------------
----------------------SS---------------S----------S---SS-----------S------------
----------------------------------------S---------------------------S--------S--
-SS--------------------------------------------S-----S---SSSSS------------------
-------------------------------------S---------S-----------SSSSS----------------
-------------------------S-----S---S---------S---------------------------------S
---------------------------------------S------S---------S------S-SSSSSSSSSS-----
-S-------------------------------------------------------------------------S----
--S--------------S---------S--SS-SSS-SS-S-S-SS--SS----------S-------------------
---------------------------S-SS------------------------------------------------S
--------------SS------------------SSSSSSSSS---S--------------------------S---S--
------------------S----------------------S-----------------------------S----S---
SS------S------S---------------------------------------------S------------------
--------------------------S----------------------------S-----S--S---------------
--------------------S---------S-----------S--------------------------------S----
-----------------------S-----S----------S---S------S-S-S-S-----------SSSS-------
---S----S-----------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------S--S--------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--S--------------S--
------------------S--S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
---------------S--------S-----------------------------------S--------S----------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-----------------------S--------------------------------------------------------
-------------S-----------------------------S--------------------------------S---
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
------------S-------------------------------------------------------------------
---------------S----SS-S-SS-----------------------S-----S--------S--------------
---------------------S----------------------------------------------------------
---------------------------------------------------------SS---------------S-----
---------------------------S----------------S-------------------S-------------S-
--------------SSSSSSS-----SS-----S---S-----------S-S-SS-------------------------
S--S----------------SS--------------S-----------S------------------------------S
----------------S-S------------------------------S--------S-----S---S-----------
----------------S----------------------------------------S--S----S--------------
----------------------------S--------------S----------SS---S-SSSSSS-S----------S
---------S-----SSSSSSSSSSSS-------S-S---------S-----S----S-------S----------S---
-----------S---------------------------S------------------------S-S-------------
-S----SS---------------------S-S-S------------SSSSS------S-----S---S-----SS-----
-----------SS------------S---S---S------S----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS
>forward_482
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CGGTACCACTCGTCTGTT
CC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>reverse_1336
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CACGCCGAAGTTTGCTGAAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>forward_1197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGCGGTATGTATGCTCCTGC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------
>reverse_3456
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------ACAGAACAGCCTCCCAACAG---------------------------------------------
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