>input_sequence_39445
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-----------------------------------------------------ATGAGAAGCATCAAGCGTCTCTCCTTG
CTCCAGCATCTCCTCTTCTTCTTCCTCTTCCTCTT---------------CCTCATCCTCGATCTTTCAGAGCTTGCTAC
CGGGCAACAAGACCAATTCGTCTACTCCGGTTTCGCAGGCGCCAACCTCGCCCTCGACGGCACCGCCACCATCACACCAG
ACGGCCTGCTTGAGCTGACCAACGGCACCTTCCGGCTCAGAGGCCATGCTTTCCACCCGACTCCATTCTACTTCAGCAGG
GCGCCCAACGGGACAGCGGTTCAGGCGCCTCAGTCCTTTGCTGTCTCGTACGTGTTTGCCATCTACTGCATCCAGGCCCA
GACCTGCGGGCACGGCATGGCCTCGGTCGTCGCCGCGAGCAGCAACTTCTCCGACACCATGCCCACCCAGTACCTGGGGC
TCATCAACGACCACAACAACGGCGACCCAGCCAACCGCTTCTTCGCCGTCGAGCTCGACACCAACTGGAACGACGAGTTC
AAGGACATTGACAACAACCATGTCGGGATCGACATCAACAACCTCGTCTCAGTGAAATCCAGCAGCGCCGGCTACTACGA
CGACCGCGACGAGGGTAACTTCCAAAACCTGACACTCGCGAGCTACAAAATGATGCAGGTGTGGGTGGAGTATGATGGAG
GTCGCAGGCAGATCAGTGTGAGCTTGGCTCCAGTAGACATGGCCAAACCCACCAAACCACTGCTCTCCACCACCTACAAC
CTCTCAACGGTGCTCCCAGACATGGTTTACGTTGGCTTCTCTGCCTCGACGGGCTCATTCGACTCGCGGCAGTATGTGCT
TGGTTGGAGCTTCGGCATCAACAGGCCTTCTCCAGCAATCGACATCACCAAGCTGCCCAAGCTGCCTCGTCAAGGTCCGA
AGCCTAGATCCAAGGTATTGGAAATCGTACTACCAATAGTTTCTGCGACATTTGTTCTTGCTGTGGGCACTGTTGTCATT
CTTCTTGTGCGAAGGCGGCTAAGGTATGCCGAGCTTAGAGAAGACTGGGAGACTGAATTTGGGCCCCATAGGTTTTCATA
CAAGGACTTGTTTCACGCCACCAAGGGATTTAAGAACAAGAATCTACTGGGGATTGGAGGATTTGGAAAGGTGTACAAGG
GAGTGCTTCCAAAGTCGAAAGTGGAGATTGCTGTGAAAAGGATCTCCCACGACTCTAAGCAGGGAATGAAGGAATTTGTG
GCAGAGGTTGCGAGCATCGGCCGCCTCCAGCACCGCAATATTGTGCAGTTGCATGGCTACTGCCGGCGCAAGGCTGAGCT
TCTTCTGGTGTATGACTACCTGTCGAATGGAAGTCTCGACAAGTACCTGTATGATCAGGAGAAGAAGCCCACTTTAACTT
GGGCCCAGAGATACAAAATCATCAAAGACATTGCGTCTGCCTTGCTTTACCTTCACCAGGAATGGGAGAAAGTTGTATTG
CATCGAGACATCAAGCCAAGCAATGTGCTCCTCGATGATGGACTGAATGGGCGGCTGGGTGACTTCGGCTTAGCAAGGTT
ATATGACCACGAGACTGGCCCTCAAACCACACATGTTGTTGGCACCATTGGATACCTAGCTCCTGAGCTAGCACACACCA
ACAAAGCAACCCCACTTAGTGATGTATTTTCCTTTGGCATGTTTGTTCTTGAGGTCACTTGTGGGCGGAAGCCCATCGAG
CCAACATCACAAGGCAACCAACTCACCTTGGTCAGATGGGTGATTGACCATTGGCACCAAGGATTTCTCACAGATGCAGT
GGATACCAAGCTCCGGGGTGCCTACAATGTTGATGAGGCATGCCTAGCTCTGAAGTTAGGATTGCTGTGCTCACACCCAT
TAATCAATCTAAGGCCCAACATGAGGCAGGTTATGCAGTATCTCAATGGTGATATGCCACCCCCAGATCTAAATCTGACA
CACATGAGCTTCAACATTCCATCCTTGATGCAGAACGAAGTTTCCGTAGACGACTTGCGTGCAGCCTTGATGGTGTAA--
--------------------------------------------------------------------------------
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--------
>chr1A_1_TraesCS1A01G048000
TCGAGTAGAATAACATTTTCTCCCCCCTTCACCCACAGAAAAAGGAGTGAACTCTTGGACAAAACAACCAACATATATTA
TTATAATAGACAAATCGCATTCAGGCAATT---TAGTGCTGCGACACTAACAATGACTAATACCCTACACAGACAAAGGA
GTTATGACTTATGAAGCCATGGTTGGCATATGTATACGACTGACTTGTGCAAGCCAAAGATTATGTCACAACATGAGAAC
TTGGCCAGATGCACCACACTTGCAGCAAGGTAATTGCCACCAGCCACAACTAGATCAGAGAAATATATCTGCTCATCAAC
AAGTCAAAGATTATGTCACAACTTAAAAAGAACTTGGCCACACTTGCAGCAAAGTAATTTCCACCAACCACAATTAGAGA
AATATATCTGCACATCTGACATCACAGCTAGCTTTCATTGTCCTAGATTGCCGCCGCAGGTCCACCATTGTTCATGATGT
CCACAACTTCCATGAAATCAGAGTTTGCCACCAGCCTCTTGAGTGATCTCCACAATCTAACAATGACGATTGACTTAGGA
CTTACGAGGCCATGGTTGACATATGTATA--TGACTGACT---TTGTGCAAGTCAAAGATTATGCCATCACAACTTCAGA
AGAACTTGGCCA--CACTTGCAGCAAGGTAATTTCCACCAACCACAACTTAGAGAAATATATCTGCACACCGACATCACA
GCAGCTTTCATTGACCTTGACTTTGCAGTGTAAG-ACTGCTTTGCGTCTAGCTCAATGCCTCAATCCACACGTGCTTGAT
ATGAATGAAGCCAGCAGAAGTATGATCCAAAGAAGCAATATTTTGCTGTGCACAATACAATACTGCAGGAGTTGGTCA--
GAAGATGCTTTTCCAGAGAATCTGACCAACTGCAGCAAAAATACTGCCAAATAGTAGAGGGCAGGCTTGCTTATGTGATT
ATGTCTCTCCATCTTTCTTCATTTCGTTTAGTAACTTCTGTTCATCCGGAGCCATGAGAAGCATCAAGCGTCTCTCCTTG
CTCCAGCATCTCCTCTTCTTCTTCCTCTTCCTCTT---------------CCTCATCCTCGATCTTTCAGAGCTTGCTAC
CGGGCAACAAGACCAATTCGTCTACTCCGGTTTCGCAGGCGCCAACCTCGCCCTCGACGGCACCGCCACCATCACACCAG
ACGGCCTGCTTGAGCTGACCAACGGCACCTTCCGGCTCAGAGGCCATGCTTTCCACCCGACTCCATTCTACTTCAGCAGG
GCGCCCAACGGGACAGCGGTTCAGGCGCCTCAGTCCTTTGCTGTCTCGTACGTGTTTGCCATCTACTGCATCCAGGCCCA
GACCTGCGGGCACGGCATGGCCTCGGTCGTCGCCGCGAGCAGCAACTTCTCCGACACCATGCCCACCCAGTACCTGGGGC
TCATCAACGACCACAACAACGGCGACCCAGCCAACCGCTTCTTCGCCGTCGAGCTCGACACCAACTGGAACGACGAGTTC
AAGGACATTGACAACAACCATGTCGGGATCGACATCAACAACCTCGTCTCAGTGAAATCCAGCAGCGCCGGCTACTACGA
CGACCGCGACGAGGGTAACTTCCAAAACCTGACACTCGCGAGCTACAAAATGATGCAGGTGTGGGTGGAGTATGATGGAG
GTCGCAGGCAGATCAGTGTGAGCTTGGCTCCAGTAGACATGGCCAAACCCACCAAACCACTGCTCTCCACCACCTACAAC
CTCTCAACGGTGCTCCCAGACATGGTTTACGTTGGCTTCTCTGCCTCGACGGGCTCATTCGACTCGCGGCAGTATGTGCT
TGGTTGGAGCTTCGGCATCAACAGGCCTTCTCCAGCAATCGACATCACCAAGCTGCCCAAGCTGCCTCGTCAAGGTCCGA
AGCCTAGATCCAAGGTATTGGAAATCGTACTACCAATAGTTTCTGCGACATTTGTTCTTGCTGTGGGCACTGTTGTCATT
CTTCTTGTGCGAAGGCGGCTAAGGTATGCCGAGCTTAGAGAAGACTGGGAGACTGAATTTGGGCCCCATAGGTTTTCATA
CAAGGACTTGTTTCACGCCACCAAGGGATTTAAGAACAAGAATCTACTGGGGATTGGAGGATTTGGAAAGGTGTACAAGG
GAGTGCTTCCAAAGTCGAAAGTGGAGATTGCTGTGAAAAGGATCTCCCACGACTCTAAGCAGGGAATGAAGGAATTTGTG
GCAGAGGTTGCGAGCATCGGCCGCCTCCAGCACCGCAATATTGTGCAGTTGCATGGCTACTGCCGGCGCAAGGCTGAGCT
TCTTCTGGTGTATGACTACCTGTCGAATGGAAGTCTCGACAAGTACCTGTATGATCAGGAGAAGAAGCCCACTTTAACTT
GGGCCCAGAGATACAAAATCATCAAAGACATTGCGTCTGCCTTGCTTTACCTTCACCAGGAATGGGAGAAAGTTGTATTG
CATCGAGACATCAAGCCAAGCAATGTGCTCCTCGATGATGGACTGAATGGGCGGCTGGGTGACTTCGGCTTAGCAAGGTT
ATATGACCACGAGACTGGCCCTCAAACCACACATGTTGTTGGCACCATTGGATACCTAGCTCCTGAGCTAGCACACACCA
ACAAAGCAACCCCACTTAGTGATGTATTTTCCTTTGGCATGTTTGTTCTTGAGGTCACTTGTGGGCGGAAGCCCATCGAG
CCAACATCACAAGGCAACCAACTCACCTTGGTCAGATGGGTGATTGACCATTGGCACCAAGGATTTCTCACAGATGCAGT
GGATACCAAGCTCCGGGGTGCCTACAATGTTGATGAGGCATGCCTAGCTCTGAAGTTAGGATTGCTGTGCTCACACCCAT
TAATCAATCTAAGGCCCAACATGAGGCAGGTTATGCAGTATCTCAATGGTGATATGCCACCCCCAGATCTAAATCTGACA
CACATGAGCTTCAACATTCCATCCTTGATGCAGAACGAAGTTTCCGTAGACGACTTGCGTGCAGCCTTGATGGTGTAAAT
TCCACTTTCTTT---TTCCAATTTAGATGCACATTTG---------------------------TCCAAACTCTACCATT
TGTCCAATGTATT----------------TACATGTGCAAGACCTATATAGAGAATTATTCTTGGTTAGTATGAAA-GCT
CTTATTTTGTATGGTTTATCATAGCCTGTAAGAACGAGACCTAGATATGTCGGGCGTGTTCAGGAGAACACAACTACACA
AGTACTTACATGTGTCCTGCAAGGCGCTATGCACTTGTTGGGCAGTAGCATGGCAACTAGCCCTTAGGGTATGTGCAATG
GTAGAGAAGACAATATTCCCTAAACCCACCACAACGGTGGCCGGGTTGTGTTCAACAAGTGGAACCCATGCCTTCAAGTG
GTGTGCCACTTAATGAACACATACATGCCTCCAACACAAACTCATATACACACTTGTTCCATACATGGTCTTTGCTTTGA
GCGACCAGAGCATAGTAGGCTTTTTGCAAAGGCATGTATCCGGTTGGAGCGAGCAGCCAAGGAGATGTTTACCCCAGATG
GTGATGGTTTAGTCTTCGGAACGGCCCTCCAATACCTTAGGAGGTACTCTTTTCGTCGAACCATGACATTTTAATCTTTG
TACA-GTGAGTTTGTCATGCTGCAGTGGTGAAGTACTCCCCACCTATGCCAATTGCCAAGAGGTTCTGTGTTCGACACAA
CCTCTCTGCATTGCA-CTCTGCAAGAATAAGGCTTGCCTTGTATAATCCTTTCCCCTACCCCACCTGGTGTGGAAGCTTC
TAGAACTGGGTTTGTCT-TTTTTGTTTCCGGGTGAGTTCGTCTTTGTTTGGACTGTTGTGCATCTTGCTCTGTACAGACC
GGGTGTGAACTCTATGCAGTTGGTACCGTCTCGATGCAACATTGGAGTCAGTAAAGCTCTCATTATTATTGAGAAAAGGG
TTATCCTACAACGATTCCTGACAATGAACAATTTAGAATGCTATATACTCCTAGACGTCTGCCTTATGCACGTGTAGCCA
TGGAAAGC
>chr1B_58
---------------------------------------------------------GACAGAACAACCAACATATATTA
TTATAATCGACAAATCGCGTTCAAGCAATTAAGTAGTGCTGCGACACTAACAATGACTAATACCCTACATTGACGACTGA
GTTATGACTTATGAATCCATGGTTGGCATATGTATAGGACTGACTTGTGCAAGCCAAAGATTATGTCACAACATGAGAAC
TTGGCCACATGCACCACACTCGGAGCAAGGTAATTTCCACCAGCCACAACTAGACCAGAGAAATATATCTGCTCATCAAC
AAGTCAAAGATTATGCCACAACTTAAAAAGAACTTGGCCACACTTGCAGCAAAGTAATTTCCACCAACCACAACTAGAGA
AATATATCTGCACATC-GACATCACAGCTAGCTTTCATTGTCCTAGATTGCCGCCGCAGGTCCACCATCGTTCATGATCT
CCACAACTTCCATGAAATCGGAGTTCGCCACTAGCTTCTTGAGTGATCTCCACAATCTAACAATGACGATTGACTTAGGA
CTTCTGAGGCCATGGTTGACATATGTATA--TGACTGACT---TTGTTCAAGTCAAAGATTATG---TCACAACTTCAGA
AGAACTTGGCCACTCACTTGCAGCAAGGTAATTTCCACCAACCACAACAAGAGAA---ATATCTGCACACCGACATCACA
GCAGCTTTCATTGACCTTGACTTTGCAATGTAAG-ACTGCTTTGCTTCTAG--------CTCAATCCACACGTGCTTCAT
ATGAGGA----CAACAAAAGTATGATCCAAAGAAGCAATATTTTGCTGTGCACAATACAATACTGCAGGAGTTGGTCA--
GGGGATGCTTTTCCAGAGAATCTGACCAACTGCAGCAAAA-TACTGCCAAATAGTAGACGGCAAGCTTGCTTATGTGATT
ATGCCTCTCCATCTTTCTTCATTTTGTCCAGATACTTCTGTTCATCAGGAGCCATGAGAAGCATCAAGCGTCTCTCCTTG
CTCCAACATCTCC---------------TCTTCTT---------------CCTCGTCCTTGATCTTTCAGAGCTTGCTAC
CGGGCAACAAGACCAATTCGTCTACTCCGGTTTCGCAGGCACCAACCTCGCCCTCGACGGCACCGCCACCATCACACCAG
ACAGCCTGCTTGAGCTGACAAATGGCACCTTTCGTCTCAGAGGCCATGCTTTCCACCCGACTCCATTCCACTTCGGCAAG
GCGCCCAACGGGACAGCGGATCAGG---CTCAGTCCTTTGCTGTCTCGTACGTGTTTGCTATCTACTGCGTCCAGGCCCA
GACCTGCGGCCACGGCATGGCCTCCATCATCGCCGCGAGCAGCAACTTCTCCGACACCATGCCCACCCAGTACCTGGGGC
TCATCAACGACCACAACAACGGCAACCCAGCCAACCGCTTCTTCGCCGTCGAGCTCGACACCAACTGGAACGACGAGTTC
AAGGACATTGACAACAACCATGTCGGGATCGACATCAACAACCTCGTCTCCGTGAACTCCAGCAGCGCCGGCTACTACGA
CGACCGCGACGAGGGTAACTTCCAAAACCTGACACTCGCAAGCTACAAAATGATGCAGGTGTGGGTGGAGTATGACGGAG
GTCGCAGGCAGATCAGTGTGAGCTTGGCTCCCGTAAACATGGCCAAACCCACCAAACCACTGCTCTCCACCACCTACAAC
CTCTCAACGGTGCTCCCAGACATGGTTTACGTCGGCTTCTCCGCCTCGACAGGCTCATTCGACTCGCGGCAGTATGTGCT
TGGTTGGAGCTTCGGCATCAACAGGCCTGCTCCGGCAATCGACATCACCAAGCTGCCCAAGCTGCCTCATCAAGGCCCCA
AGGCTAGATCCAAGGTACTGGAAACCGTACTGCCAATAGTTTCTGCGGCATTTGTTCTTGCTGTGGGCACCACCGCCATT
CTTCTTGTCCGAAGGCGGCTAAGGTATGCCGAGCTTAGAGAAGATTGGGAAACTGAATTTGGGCCCCATAGGTTTTCATA
CAAGGACTTGTTTCACGCCACCGAGGGATTTAAGAACAAGAATCTACTGGGGATTGGAGGATTTGGAAAGGTGTACAAGG
GGGTGCTTCCAAAGTCGAAAGTGGAGATTGCTGTGAAAAGGATCTCCCACGACTCTAAGCAGGGGATGAAGGAATTTGTG
GCAGAGGTTGCGAGCATCGGCCGCCTCCAGCACCGCAATATCGTGCAGTTGCATGGCTACTGCCGTCGCAAGGCTGAGCT
TCTTTTGGTGTATGAATACCTGTCGAATGGAAGCCTCGACAAGTACCTGTATGATCAGGAGAAGAAGCCTACTTTAACCT
GGGCCCAGAGATACAAAATCATCAAAGACATTGCGTCTGCCTTGCTCTACCTTCACCAGGAATGGGAGAAAGTTGTGTTG
CATCGAGACATCAAGCCAAGCAACGTGCTCCTCGATGATGGACTGAACGGGCGGCTGGGTGATTTCGGCTTGGCAAGGTT
ATATGACCACGAGACTGGACCTCAAACCACACATGTTGTTGGGACCATTGGATACCTAGCTCCTGAGCTAGCACACACCA
ACAAAGCAACCCCACTTAGTGATGTGTTTTCCTTTGGCATGTTTGTTCTTGAGGTCACTTGTGGGCGAAAGCCCATTGAG
CCAGCATCACAAGGCAACCAACTCACCTTGGTCAGATGGGTGATTGACCATTGGCACCAAGGAATTCTCACAGATGCAGT
GGATACCAAGCTCCGAGGTGCCTACAATGTTGATGAGGCATGCCTAGCTCTGAAGTTAGGATTGCTGTGCTCACACCCAT
TGATCAATTTAAGGCCCAACATGAGGCAGGTTCTGCGGTATCTCAATGGTGATATGCCACCACCAGATCTGAATCTGACA
CACATGAGCTTCAACATTCCATCCCTGATGCAGAATGAAGTTTCAATAGATGACTTGCGTGCAGCCTTGATGGTGTAAAT
TCCACTTTCTT---ATTCCAATTTAGATGCACATTTG---------------------------TCCAAACGCTACCATT
TGTCCAATGTATT----------------TACATGTGGAAGACCTATATAGAGAATTATTCTTGGTTAGTATGAAAAGCT
CTTATTTTGTATGGTTTATCATAGCCTGTAAGAACAAGACCTAGATATGTAGGGCGTGTTCAGGAGAACACAACTACACA
AGTATTTACATGTGTCCTGCAAGGCGCTATGCACTTGTTGGG-AGTAGCATGGTGCCTACCCCTTAGGGTATGTGCAATG
GTAGAGAAGACAATATTCCCTAAACCCACCACAACGGTGGCCGGGTCGTGCTCAACAAGTGGAACCCATGCCTTCAAGTG
TTGTGCCACTTAATGAACGCATACATGCCTCCAACACGAACTCATATACACACTTGTTCGATAAGTGGTCTTTGCTTTGA
GCGACCAGAGCATAGTGGGCTTTTTGCAAAGGCATGTATCCGGTTGGAGCAAGCAGCCAAGGAGATGTTTACCCCAGATG
GTGATGGTTTAGTCTTCGGATCCGCCCTCCAATACCTTAGGATGTACTCTTTTCGTCGAACCATGCCATTTTAATCTTTG
TACGTGTGAGTTTGTCATGGTGCGGTGGTGAAGTACTCCCCACTAATGCCAAG-----AGGT------------------
--TCTCTGCATTGCACCTCTGCAAGAATAAGGCTTGCCTTGTATAATCCTTTCTCCCACCTCACCTCGTGCGGAAGCTTC
TAGAACTGGGTTTGTCTTTTTTTTTTTACGGCTGAGTTTGTCTTTGTTTGGACTC-TGTGCATCTTGTTCTGTACAGACA
GGGTGTGAACTCTATGCAGTCA-TATCGCCTCGATGCAACGTTGGAGTCAATAAAGCTCCC------ATTGAGAAAAGGG
TTGTCCTACAACAGTTCCTGACAATGCCCAATTTAGAATGCTACATACTCCTAGACGTCTGCCTTATGCACGTGTAGCCA
TGGAAAGC
>chr1D_457
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-----------------------------------------------------------GTCCACCATTCTTCATGACAT
CCACAACTTTCATGAAATCGGAGTACGCCACCAGCATCTTGAGTGATCTCCACAATCTAACAATGACGACTAACTTAGGA
CTGACGAGGCCGTGGTTGACATATGTATGACTGACTGACTGACTTGTGCAAGTCAAAGATTATG---TCACAGCTTCAGA
AGAACTTGGCCA--CACTTGCAGGAAGGTAATTTCCACCAACCACAACTAGAGAA---ATATCTGCACACCGACATCACA
GCAGCTTTCATTGACCTTGACTTTGCAATGTAAAAACTGATTTGCTTCAAG--------CTCAATCCACACGTGCTTCAT
ATGAATGAAACCAACAGAAGTATGATCCAAAGAAGCAATATTTTGCTGTGCACAATACAATACTGCAGGAGTTGGTCAGG
GGGGATGCTTTTCCAGAGAATCTGACCAACTGCAGCAAAAATACTGCCAAATAGTAGAGGGCAGGCTTGCTTATGTGATT
ATGTCTCTCCATCTTTCTTCATCTCGCTTAGTAACTTCTGTTCATCCGGAGTCATGACTAGCATTAAGCGTCTCTCCTTG
CTCCAATATCTCC---------------TCTTCTTCTTCTTCTTCTTCTTCCTCGTCCTTGATCTTTCAGAGCTTGCTAC
CGGGCAACAAAACCAATTTGTCTACTCCGGTTTCGCTGGGGCCAACCTCGCCCTCGAAGGCGTGGCCACCATCACACCAG
ACGGCCTGCTTGAGCTGACCAACGGCACCTTCCGGCTCAGAGGCCATGCTTTCCACCCGACTCCATTCCACTTCGGCAAG
GCGCCCAACGGGACAGCAGTTCAGG---CTCAGTCCTTTGCTGTCTCGTACGTGTTTGCTATCTACTGCGTCCAGGCCCA
GACCTGTGGCCACGGCATGGCCTCCATCGTCGCCGCAAGCAGCAACTTCTCCGACACCATGCCCACCCAGTACCTGGGGC
TCATCAACGACCACAACAACGGCGACCCAGCCAACCGCTTCTTCGCCGTCGAGCTCGACACCAACTGGAACGACGAGTTC
AAGGACATTGACAACAACCATGTCGGGATCGACATCAACAACCTCGTCTCTGTCAACTCCAGCAGCGCCGGCTACTACGA
CGACCGCGACGAGGGTAACTTCCAAAACCTGACGCTCGCGAGCTACAAAATGATGCAGGTGTGGGTGGAGTACGATGGAG
GTCGCAAGCAGATCAGTGTGAGCTTGGCTCCCGTAGACATGGCCAAACCCACCAAACCACTGCTCTCCACCACCTACAAC
CTCTCAACGGTGCTCCCAGACATGGTTTACGTCGGCTTCTCCGCCTCGACGGGCTCATTCGACTCGCGGCAGTATGTGCT
TGGTTGGAGCTTCGGCATCAACAGGCCTGCTCCAGCGATCGACATCACCAAGCTGCCCAAGCTGCCTCGCCAAGGCCCCA
AGCCTAGGTCCAAGGTACTGGAAATCGTACTGCCAATAGTTTCTGCGGCATTTGTTCTTGCTGTGGGCACCACTATCATT
CTTCTTGTGCGAAGGCGGCTAAGGTATGCCGAGCTTAGAGAAGATTGGGAAACTGAATTTGGGCCCCATAGGTTTTCATA
CAAGGACTTGTTTCATGCCACCAAGGGATTTAAGAACAAGAATCTACTGGGGATTGGAGGATTTGGAAAGGTGTACAAGG
GGGTGCTTCCAAAGTCTAAAGTGGAGATTGCTGTGAAAAGGATCTCCCACGACTCGAAGCAGGGGATGAAGGAATTTGTC
GCAGAGGTTGCGAGCATCGGCCGCCTCCAGCACCGCAATATTGTGCAGTTGCATGGCTACTGCCGTCGCAAGGCTGAGCT
TCTTTTGGTGTATGAATACATGTCGAATGGAAGTCTCGACAAGTACCTGTATGATCAGGAGAAGAAGCCTACTTTAACTT
GGGCCCAGAGATACAAAATCATCAAAGACATTGCGTCTGCCTTGCTCTACCTTCACCAGGAATGGGAGAAAGTTGTATTG
CATCGAGACATCAAGCCAAGCAATGTGCTCCTCGATGATGGACTGAATGGACGGCTAGGTGATTTCGGCTTGGCAAGGTT
ATATGACCACGAGACTGGCCCTCAAACCACACATGTTGTTGGCACCATTGGATACCTAGCTCCTGAGCTAGCACACACCA
ACAAAGCAACCCCACTTAGTGATGTGTTTTCCTTTGGCATGTTTGTTCTTGAAGTCACTTGTGGGCGAAAGCCCATCGAG
CCAGCATCACAAGGCAACCAACTCACCTTGGTCAGATGGGTGATTGACCATTGGCACCAAGGAATTCTCACAGATGCAGT
GGATACCAAGCTCCGAGGTGCCTACAATGTTGATGAGGCATGCCTAGCTCTGAAGTTAGGATTGCTGTGCTCACACCCAT
TGATCAATTTAAGGCCCAACATGAGGCAGGTTCTGCAGTATCTCAATGGTGATATGCCACCCCCAGATCTGAATCTGGCA
CACATGAGCTTCAACATTCTATCCTTGATGCAGAATGAAGTTTCAATAGATGACTTGCGTGCAGCCTCGATGGTGTAAAT
TCCACTTTCTTCTTATTCCAATTTAGATGCACATTTTTTTAAACCTTTTTAGATGCACATTTTTTCCAAACTCTACCATT
GAATCAATATATTATGTGCAATGTATTCATACATGTGGAAGA---------AGAATTATTCTTGGTTAGTATCAAAAGCT
CTTATCTCATATGGTTTATCATAACCTCTAAGAACAAGACCTATATATGTAGGGCATGTTCAGGGGAACACAACTACACA
AGTACTTACATGTG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CCTTATGTTGTCCTCTTTTTGTTGAACCATGTCATTTTAAGTTTTA
TACGTGTGAGTTCGTCCTGGCACAGTGGTGAATTACTCCCTACTTGTGCCAAG-----AGAGGTCTTGGATTCGATGCAT
CCTTTCTACATTGCA-CTATGCAAAGGTAAGGCTTGCCCTGTGTAATCCTTTCCCCGACCCCACCTGGTGCGGAAGTTTC
TAGAACTGGGTTTGTAC---TTTTTCTACGGGTGAGTTCGTCTTTGTTTGGACTG-TGTGCATCTTGTTCTGTACAGACC
GGGTGTGAACTCTATGCAGT------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------------------
-------S----------S----S---------------------------------------------SS---S-SS--
---------------S--------------------S-------------------------------------------
-------S------------S-S------------S------------------S-------------------------
---------------S---------------------------------------------------------S------
----------------S-------------------------------------------------------------S-
-------------------S-----S---------S--------------------------------------------
----------------------------------------------------------------SSS-------------
-------------------------------------------------SSSSS-SSS----------------------
---------------------------S-----------------S-----SSSSSSSS------------------S--
---------S---S------------------------------------------------------------------
-SS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-------SSSSSSSSSSSSSSS--S-----------------------S----S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----S---S-
-------------------------SSS-------------------------------S---------S----------
---------S--------------SS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----S-----------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------S--------S--------------------------------------
----------------------------S----------------------------------------------S--S-
-----------------S-------------S---------------S----------------------SSS-------
--------------------------------------------S-----S-----------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------------------------S---------------
-----------------------------------------------------------------S--------------
----S----------S-----------------------------------------------------S----------
----------------------------------------------S---------------------------------
--------------------------------------------------------------S--------S--------
--------------------------------------------------------------------------------
-------------------------S-----------------------------------------S------------
---S-----------------------------------------------------------S----------------
---------------S----------------------------------------------------------------
-S------S-----------------------S-------------------------------------S---------
-----------------------------------S--------SS----S-----------------------------
-----------S--------------------------------------------------------------------
-------------------------------------S------------------------------------------
-----------------------------------S--------------S-----------------------------
------------------------------------------S----------SSS---S--------------------
----------------------------------------------S---S-----------------------------
S-----------------S------------------S---------------------S---SS---------------
----------------S---------------------------------S-----------------------------
--------------------S-S-------------------S----------------------S--------------
---S---------------S-----------------------S--------SSSSSS------SS--SS-----SS--S
--------------------------------------------------------S-------------S---------
-----------------------S---S---------------------------S-----------S------------
--------------------SSS--S--S-----------S---------S--------S-SSSSSS-------------
--S---------SS------------SS---------------S------------------------------------
--------
>forward_295
--------------------------------------------------------------------------------
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-----------------------------------GCCACCAGCCACAACTAGAT-------------------------
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>reverse_1307
--------------------------------------------------------------------------------
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--------------------------GCCTCAGTCCTTTGCTGTCT----------------------------------
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>forward_798
--------------------------------------------------------------------------------
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----------------------------------------------------------CCTCAATCCACACGTGCTTG--
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>reverse_2708
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GAAGCCCATCGAG
CCAACAT-------------------------------------------------------------------------
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>forward_1340
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----------------------------------------CTGTCTCGTACGTGTTTGCC--------------------
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--------
>reverse_3236
--------------------------------------------------------------------------------
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-----------------------------------GAGACCTAGATATGTCGGGCG------------------------
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--------
