>input_sequence_39419
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------------------------ATGGCTTCAGCACAGCCGTGGAAGTCTATGTTCTGCTGCGTCGGAGCGGGGGCGGC
CGTG---------------GACGAAGAAGGGCCGTCGCCGTCTTCCACGCCGAGGCGGAGGAGAGGGGAGCGGAGGACGC
TGCTGCCGTCGTCGTCCGCGTCGACGGCGTCCCGGGTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAG
GACCTCTCGCTGACGCTGTCCGGCTCCAACCTGCACGCCTTCACCTACGCCGAGCTCAAGGCGGCCACCGCCGGCTTCTC
CCGCTCCAGGTACCTCGGCTGCGGCGGCTTCGGGCCCGTGTACAAGGGCCAGCTCGCCGCCGAGCTCCGGCCGGGCCTGG
AGGCGCAGACGGTCGCCGTCAAGTACCTCGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCC
ACTGACTCCACCATTGTTG---TTGCACGTACGGATGCATGATCTGTCAAATAAAATACCTCCATTATTGCGCCAACTAA
CTTCTCGATCCGATTGGTTCTGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAGGAACCTGGTGAAGCTGGTCG
GCTACTGCTATGAGGAGGAGCACCGGATGCTGGCGTACGAATTCATGGGCACCGGCAGCCTGGAGAAGCACCTCTTCAGA
AGCATCGACGGCCCCATGCCGTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGG
CGCCGACACGCCGGTCATCTTCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACTCAACTGCCCGA
TTAATCCAATTATCTCATCATTTTTGAGACTTGACCACGAGTTGGCGATAGAGCAACTTGTGGACGGATGAATGTCAAAG
TCTGGCACCCGTTTTTTTTTTGACGAAAAACAGCATTGTGCTGATTTCATTCATTAAGATAGGATGAGACACCCCAAGAA
ATACAGGTCAAGGTTTGCTAGGGTTTGCTGGCTTCGCTGGAAAAGCCAGCGGCGCCATGATTAGGACTTGGAATTGGAAG
GTTCCTGGATGCCCATTTCTCACATAAATCCTACTACTCACAATCAATAAATCTGTACCCACCCGTGCCATAATGTATGA
TTATGTCAGTATCAAAGCAACAGCCTGACAGATACAGCTTAGCACGATAGAAACGTTGTCAGGTTA----CATGGATATA
TC--------TGTGTTTGTCACATGTTATCTTTGCCTAACCTAATTTGCTTCTTGCATTTCAGGACTATACCGCCAAGCT
GTCCGACTTCGGCCTCGCCAAGGATGGCCCCAACGGCGACGCCACCCATGTCACGACACGTATCATGGGTACACATGGAT
ATGCCGCACCAGAGTACATCATGACGGGGCATCTGACCGCTAAGAGCGACGTTTATAGCTTCGGCGTGGTGCTCCTCGAG
CTATTATCGGGTCGGCGGTCCATTGACCGTGCTCGGCGTTCCAGGGAGCAAAGCTTGGTTGACTATGCCAGACCATACCT
CAAGAAGCAGGACAAGCTGCACCGGGTCATGGATCCGGCTTTGGAATGCCAATACTCGTCTCAGGGGGCTGAACTGGCTG
CACGAGTAGCGTACAAATGCTTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCC
ATACTCAAGATGGACGACTACCTACAAGTGGGTACATTCGTGTTCACAGTCGTAGTGGAAAATACTGATAAAAGCGTCGA
GAACAAAGGAAAGCTTATTGATGACGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCACCAGAGCC
ACCAAGATCGACACCGGCAAAAGTTCCCAAACTCAACGATACACGCTGACATTTTGCTGCAACGGGATGGTGCCATCGGG
CCGTATACCACTGCGCTACAACGTCACCGAAGAGCATCAAGTTACACTGAGGAAAGGGGTGCATAG--------------
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----
>chr1D_1_TraesCS1D01G091600
CTGCATCCAACCTGTCGATCATCTGGCCGCGCAACATTCTCCGATCTCTAGCGCACGTGTCATTATTGATGGAAGTAGTA
GTATCAACAGAAGCCAGAAGGACC---AGCGCATAAACACGAGAACCGCCCGGAAGTTGCACCCGCTGTGCT----GCC-
GATGCGAGATTTGCTGGAATCAGATCGCGTTTGATGCTGCATGCTCTACCAGCTTCAGGTAGCAGCTCGCGGCTTCCTTA
CC------AGCTTCCACTGTCACCCGGCGCTGCTGGCCAAGGCCTGGCTG------------------------------
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---------------------------------------------------------------AAAACCATTTTACTAGC
AGAAGAACATGGACCTAGCCAGAAGAGGCAAGTATCTTCTCTCGTAGTA---AAACATTCAACTGGCTGCCCTGCCGATC
GGCATATGTTGGATTTTCACGTGGCCTGACATCTGCCACTAGTTAATTTGCATCGCCCATCGGTCAATCACGGCCAGCAT
CCACACGGAGCGC----------CCTGCTTCAAGGAACCTCACGTTTTCCACCCGTCCCGTCGCGCGCCGGGTCAGCGTC
ACGCACGTAAAGCGGTGCGATGCGCCCGCGCACCAGATTCCAGATTACCGGTCTCCCGTGGCATCTCGCTCGCTCGCCCG
TTCCGTACGAGGGGAAAGGAGAGGAAGGTGTGAATAGTCAAGCGCGGGGA-GCTCAACGACCAACTCGTCTGCTGCCTTT
TGTTTTTGTTCGCTACTGCCCGCAGGCCCGCGCGTCGCGG---CTTCGTGCCCCGCGACAGGGTCAAGGCAAGCCAACAC
CACGCACGATTCCGTTCCCTCCCGTGCCCGCCAT----------TATATGCCCGCCGTCGCCCACCGATGCTTCGTCGTC
AACCAGTC-----TCTCCTCCCCCATCTCTTCTTCAACTCCCCTGACCCTCACACCGGAATTCACAGGCTCAACCAAGAA
AGCAACCAGTCTGCATCGAGAGGATCGTTGCCAGTTCTTCCGATTCTTGCTCTTGCATTGCGCAGTCCATCTTCGATCGC
CGCGGAGC-----TGGTGTCACCGATGGCTTCAGCACAGCCGTGGAAGTCTATGTTCTGCTGCGTCGGAGCGGGGGCGGC
CGTG---------------GACGAAGAAGGGCCGTCGCCGTCTTCCACGCCGAGGCGGAGGAGAGGGGAGCGGAGGACGC
TGCTGCCGTCGTCGTCCGCGTCGACGGCGTCCCGGGTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAG
GACCTCTCGCTGACGCTGTCCGGCTCCAACCTGCACGCCTTCACCTACGCCGAGCTCAAGGCGGCCACCGCCGGCTTCTC
CCGCTCCAGGTACCTCGGCTGCGGCGGCTTCGGGCCCGTGTACAAGGGCCAGCTCGCCGCCGAGCTCCGGCCGGGCCTGG
AGGCGCAGACGGTCGCCGTCAAGTACCTCGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCC
ACTGACTCCACCATTGTTG---TTGCACGTACGGATGCATGATCTGTCAAATAAAATACCTCCATTATTGCGCCAACTAA
CTTCTCGATCCGATTGGTTCTGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAGGAACCTGGTGAAGCTGGTCG
GCTACTGCTATGAGGAGGAGCACCGGATGCTGGCGTACGAATTCATGGGCACCGGCAGCCTGGAGAAGCACCTCTTCAGA
AGCATCGACGGCCCCATGCCGTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGG
CGCCGACACGCCGGTCATCTTCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACTCAACTGCCCGA
TTAATCCAATTATCTCATCATTTTTGAGACTTGACCACGAGTTGGCGATAGAGCAACTTGTGGACGGATGAATGTCAAAG
TCTGGCACCCGTTTTTTTTTTGACGAAAAACAGCATTGTGCTGATTTCATTCATTAAGATAGGATGAGACACCCCAAGAA
ATACAGGTCAAGGTTTGCTAGGGTTTGCTGGCTTCGCTGGAAAAGCCAGCGGCGCCATGATTAGGACTTGGAATTGGAAG
GTTCCTGGATGCCCATTTCTCACATAAATCCTACTACTCACAATCAATAAATCTGTACCCACCCGTGCCATAATGTATGA
TTATGTCAGTATCAAAGCAACAGCCTGACAGATACAGCTTAGCACGATAGAAACGTTGTCAGGTTA----CATGGATATA
TC--------TGTGTTTGTCACATGTTATCTTTGCCTAACCTAATTTGCTTCTTGCATTTCAGGACTATACCGCCAAGCT
GTCCGACTTCGGCCTCGCCAAGGATGGCCCCAACGGCGACGCCACCCATGTCACGACACGTATCATGGGTACACATGGAT
ATGCCGCACCAGAGTACATCATGACGGGGCATCTGACCGCTAAGAGCGACGTTTATAGCTTCGGCGTGGTGCTCCTCGAG
CTATTATCGGGTCGGCGGTCCATTGACCGTGCTCGGCGTTCCAGGGAGCAAAGCTTGGTTGACTATGCCAGACCATACCT
CAAGAAGCAGGACAAGCTGCACCGGGTCATGGATCCGGCTTTGGAATGCCAATACTCGTCTCAGGGGGCTGAACTGGCTG
CACGAGTAGCGTACAAATGCTTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCC
ATACTCAAGATGGACGACTACCTACAAGTGGGTACATTCGTGTTCACAGTCGTAGTGGAAAATACTGATAAAAGCGTCGA
GAACAAAGGAAAGCTTATTGATGACGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCACCAGAGCC
ACCAAGATCGACACCGGCAAAAGTTCCCAAACTCAACGATACACGCTGACATTTTGCTGCAACGGGATGGTGCCATCGGG
CCGTATACCACTGCGCTACAACGTCACCGAAGAGCATCAAGTTACACTGAGGAAAGGGGTGCATAGTGTTGATCATCACA
GAGCTTAGTTAGGACCGTTGTTAAGGAGTAAGAGTATCAAAATGGAAGATTGTACATATTTGAACTAGATCCTGTAGGTG
TGTAACACAAGTCACGGATCACCAAATTGGTTTG----------------------------------------------
----------GTTGAGAGAGAATTTTTTAGA-AAAAAATATAGATGTATTATTCTTTTATGAGAAATCTTGATAGTGAAG
TTGGGTGTAAATGCCAAAAGTTTTGTGAGAAGTCCGGTTAATGTATTGGATTAATCAGATAAGTGTCAAAGTATATAAAT
AGCAAGCGAGAATGATAAATGTTTTCTGAAATGGTAATTTTGTTACCTTCATGTTAGAAAAAGTTGCTCCCATAATCCGG
TTTCTGCGCTTTGTCCTCATGTCATTTTTTTTGACGTAACCTCATGTCATTTTGGTGGTATTGTGAGCCTCTAGTATACC
ATCCTTTTCATTGAGAAGTCTATGGATAAAGCCAGAAACCTAAAAGGGATTCTTTCCTGTTTGGAAAGCCTTTATGGTAT
GAAAATCAGTTTCCATAAAAGTGACATATTGACTATTAATGTGGATGCTGAGCAGGCAAACTTCTATGCTCATTTTTTTC
TGCTGTAAAATGGTTCATTTCCTTTCAAGAATTTGGGGGTTCCCCTACATTTTAACAAGCTGAAAATAGAGGATCTGCAG
CATGTCATGGACAGATTCATTAAGAATATATCTAGATGACTAGGTTAAAAATATGTCTTATAGGGGCAAATCCACC-TTT
CTTCGATCATGTATCACCAGTATATCTGCTTACTTTTTTCCGAACCGGGCTTTCCCCCTTTCCATTACTTTCATAACGGA
AATACAGAGTCTCAGAAACTGAAACCAGCAAGGCTAGAGAGAAAGAGGAAAAGCGAGTTCGGGGCAACACCAGGAAACCC
ACTATCTGCGCCTGTCATCAGGAACAACAGATCATGGGGCGAAAACCTGGGTGTCACCCAAAACCGCACTACGAACACCT
ACGC
>chr1A_1
CTGCATCCAACCTGTCGCTCATCTGGCCGCTCAACATTCTCCGATCTCTAGCGCACGTGTCATTATTCATGGAAGGATTA
ACC-------------GAACGACC---AGCGCATAAGCACGAGAACCCGCCGGAAGTTGCACCCGCTGTGCT----GTGG
GAGGCGAGATTTGCTGGGATCAGATCGCGTTTGATGCTGCATGCTCTACCAGCTTCAGGTAGCACCTCGTGGCTTTGCAA
GTGGGAGTAGCTTCCACTATCACCCAGCGCTCCGTTTCGAAAAAAACTATCACCCAGCGTTGCTTTTTTTTTTTCAGGCT
AATAGAGAGCTTTATTGATTAAAGGTATTCGCTGGGCAGTCCGCCAACAGGGCACTGACCAGGAAACCGGGAGTATTATC
GAGCCAACTATCGGTCCTGTCAATCGTGCAAGCATGCTTAGCACAGATGTGAGCAGGCTCATTAGCTGATCTTACAACAT
GACAAATATCAAAAGATGAAAAACAAGTGGTAAGCTCTCCAATATCTAACAAAATAGGAGCCACGACCGAACGGGAGTCG
TGTCGAGTAGCCCAGAGGTTTACAACCTCCAGAGAGTCCGTCTCCATGATGACGTTTGAGAAGCCCCTTAGTTTAGCGAA
GATCACGCCGCCCCTCACCGCCAAAGCTTCAGCTATGAGAGGATCTGTTACCCCAGGATAGGGCTTGCTCCACGCTCCTT
GAAAGGCGGTCGGGGAGCGAGCGACGCCTCCTGCACCACCCTTGCCGCCATCAAGATGTATGGCTGCGTCTGTGTTGATC
TTGACGAATCCGGGGTCTGGAGGGCGCCAACCGTGTCCCGGCAACATTAGCGCCTGCTGCCGGGGAATGTCCAGGAGTGC
TAGTGTCTCCCTCGTGCGGCAGACGAGGTCGCCGGATCAAGCTTGTCCTCGCCATGAGTCAGCTTGTTCCTTGAGTGCCA
TATAGACCACATCATCGAGACTAGTATCGATCGATCCCTGTTGGTGAGTGTGTCGCTGTAGATGACATCCTTTGCCCAGG
TGAGGGGTTGGAGTGTTAGCATGTCGAAGTCGAACAGCTGCTCGGCCTCTTCCCAAAACTGCTTTGCACGGCTGCACCTA
AGTAGAGCGTGTTCCAAGTCCTCATCATAAGCCAATCAAAGCTTGCAAGTTCCTTGTTCTCGCAGGTGTCGATGTAGCAA
AGTGCATTCATCAGGTAAAATGCCTCTCAGCACCCGCCAAAAAAAAACCCTGACCTTGGGCAGCACCTTCAGTTTCCACA
GCTTGTCCCATACCTGTTGCTCATTGATTGGAGTTTCGGTATCCTGCCCTTCCTCTTGAGCTTGACGCTCGTTGCGAGTC
ACTAGAGCTCGGTACGCCAATTTAACGGTATAGTTGCCTGAAACATCATGTGCCCATGCTAAAAAGTCCTTGCCACCGCC
GGTTCTCAAAGGGATGTTCAATATTGCTGCCGCATCGGATGGCTGGAATGACTCTTGAATAAGATCCCGCTGCCATGTCC
AGTTGTCCGTATCAATAAGATCACTGACCTTTGACACCAAATCTGCTATCCTGAGAGTGGGAATAAAGTTGGCTATGCCG
GGCACCCATGGGTCAGACCACGCAGATATAGAAGATCCGTCGCCGACCCGCATAATGAGCCCCATTCGCAGCGCTTCCCG
CCCGGCGATAATCGCCCTCCAAGTCGACGAGGAGGAGCCCAGTGTTGAAGCCTGCATGAAATCAGAATTGGGGAAATATT
TTCCTTTCAAAACTCGGTCACGCAGGGTGTTAGGATTTGTCATAAGCCGCCAGCCTTGTTTGCCAAGCATTGCTAAGTTG
AAAAGATGGAGGTCCCGAAAACCCATTCCTCCTTTGCACTTAGGTGTTGCAAGCTTCTTCCATGATATCCAGTGTAAAGC
ACGTTTGTCAATGGAGCTACTCCATCAGAACTTGGCCATGCAAGTCGTTAAGCTCTTGCATACTTTCTTTGTCAGCAGAA
ACACACTCATGCTAAATGTGGGGATGGCTTGCGCGATGGATTTAATCAGAGTTTCCCTTCCCGCACACGCAAACAATCTC
TCTGACCATCCCTGCATGCAACTTCTTGATCTTTCCCTTATATGTTCGAATGTGCCGCTGGTGATCCTGCCCACGGCTGT
TGGGAGACCAAGGTAATGCTCGCTAAAAGTTTCAGCATGTACATCAAGGGTGGTTTTGATAAGCTGTCGTTGATCAAGTG
GGGTGTTTGGACTGAAGAAGATGGCACTCTTCTCTCTATTGACACACTGACCAGAGGCACTACCATAGATGCGCAAAATC
GCATTCAATCTGTTCGCACTCTCAGCATCAGCCTTTCTGAACATGAGGCTATCATCTGCGAAGAGCAGATGGTTTACCCA
AGGGGCGTGATAGTTGACTCGAATCCCTCTATCCACTGTGCCATAATGTTTGAGCAAGGAAGAAAATCCTTCTGCACAGA
GTAGAAAAAGAAATGGCGACATCGGGCAGCCCTGCCGCAAACCCCGAGATGGGTTGAAGAAAGGCAATAGTTCTCCATTA
ACTCGTACTGAGAAACACACTGATGTTACACACTTCATAACAAGTCTGACAAGGTCTGCGCCAAAACCAATCTTGGATAG
TATAGCTTCCAAATAACTCCATTCAACTCGGTCGTAAGTTTTCATCATATCAAGTTTGATTGCGCAAGAGTAATTCTTCC
CCTTCCTCCTTCGCCGCCTGGCATGAATGCTTTCGAACGCAACCAAAACATTGTCAGTAATGAGGCGTCCGAGGACGAAA
GCGCTTTGCTCCTCGTTAATGAGCTCATCCATGAAATCCCGCATCCTATTGATGATGACCTTGACAGCCAATTTGTACAG
AACCAGGCATAACGAGATAGGTCGATAATGTGAGATGGTTTGTGGGTTACGCACCTTAGGGAAAAAACCATTTTACTAGC
AGAAGAACATGGACGTAGCCAGAAGAGGCAATTATCTTCTCTCGTACTACTAAAACATTCAACCGGCTGCCT----GATC
GGCATATGTTGGGTTTTCACGTGGTCTGACACCTGCCACTAGTTAATTTGCATCGCCAATCGGTCAATCACGGCCAGCAT
CGACACGGAGCGCGCATATGGCCCCTGCTTCAAGCAACCTCACGTTTTCCACCCGTCCCGTCGCGCGCCGGGTCAGCGTC
ACGCACGTAAAGCGGTGTGATGCGCCCTCGCACCAGATTCCAGATTACCGGTCTCCCGTGGCATCTCCCTTGCTCGCCCG
TTCCGTACGAGGGGAAGAGGAAGGAAGGCGGGAATAGTCAAGCCCCCGGAAGCTCAACG----ACTCGTCTGC-------
--TTCTTGTTTGCTACTGCCCGCGCGCC--------GCGG---CTTCGTGCCCCGCGACAGGGTCAAGGCAAGCCAACAC
----CACGATTCCGTTCCGTTCCGTTCCACCACCACGGCCATTATATATACCCGCCGTCGCCCACCGATGCTTCGTCGTC
AACCAGTC-----TCTTCTCTCCCATCTCCTCTTCAACTCCCCAGCCCCTCACAGCTCG-------------ACCAAGAA
ACCAACCAATCTGCATCGCCAAGATCGTTGTCAGCTCTTCGAT-------TCTTGCATTGCGCGGTCCATCTTCGATCGC
CGCGGAGCAGGTATCGTATCACCGATGGCTTCAGCGCAGCCGTGGAGGTCTATGTTCTGCTGCGTCGGAGGCGCGGCGGC
GGGGGCGGCCA------CCGACGACGAAGGGCCGTCGCCGTCTTCCACGCCGAGGCGGAGGAGAGGGGAGCGGAGGACGC
TGCTGCCGTCGTCGTCCGCGTCGACGGCGTCCCGGCTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAG
GACCTCTCGCTGACGCTCTCCGGCTCCAACCTGCACGCCTTCACCTACGCCGAGCTCAGGGCGGCCACCGCCGGCTTCTC
CCGCTCCAGGTACCTCGGCTGCGGCGGCTTCGGGCCCGTGTATAAGGGCCAGCTCGCCGCTGAGCTCCGGCCGGGCCTGG
AGGCGCAGACGGTCGCCGTCAAGTACCTCGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCC
ACTGACTCCACCATTGTTG---TTGCACGTACGGATGCATGAGCTGTCGAATAAAATACCTCCATTATTGCGCCAACTAA
CTTCTCCAT--GATTGATTCTGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAGGAACCTGGTGAAGCTCGTCG
GGTACTGCTACGAGGAGGAGCACCGGATGCTGGCCTACGAGTACATGGGCACCGCCAGCCTGGAGAAGCACCTCTTCAGA
AGCATCGACGGCCCCATGCCGTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGG
CGCCGACACGCCGGTCATCTTCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACT-----GCACGA
TCAATCGAACCATCTCACCATTTTCTAGCCTTGACCACGAGTTGTCGATAGATCCACCTGTGGACGGCTGAATGTCAAAG
TCTGGCACCCGTTTCAAACAT-----------------------------------------------------------
----------------------GTTTGCTGGCTTCGCTGGAAAAGCCAGCGGCGCCATGATTGGGACTTGGAATAGGAAG
GTTCCTGGATGCCCATTTGTCACATAAATCCTACTACTCACAATCAATAAATCTGTACCCACCCGTGCCATAATGTATGA
TTATGTCAGTATCAGAGCAACAGCCTGACAGATACAGCTTAGCACGATAGAAACGTTGTCATGTTA----CACGGATATA
TC--------TGTGTTTGTCACAGGTTATCTTTGCCTAACCTAATTTGCTTCTTGCATTTCAGGACTATACCGCCAAGCT
GTCCGACTTCGGCCTGGCCAAGGATGGGCCCAACGGCGACGCCACCCATGTCACGACACGTATCATGGGGACACATGGAT
ATGCCGCACCAGAGTACATCATGACGGGGCATCTAACCGCTAAGAGCGACGTTTATAGCTTCGGCGTGGTGCTCCTTGAG
CTGTTATCGGGTCGGCGGTCCATTGACCGTGCTCGACGTTCCAGGGAGCAAAGCTTGGTTGACTATGCCAGACCTTACCT
CAAGAAGCAGGACAAGCTGCATCGGGTCATGGATCCGGCTTTGGAATGCCAGTACTCGTGTCAGGGGGCCGAACTGGCTG
CACGTGTAGCGTACAAATGCTTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCC
ATACTGAAGATGGATGACTACCTACAAGTGGGTCCATTCGTGTTCACAGTCGTAGTGGAAAATACCGATAGAAACGTTGA
GAAGAAAGAAAAGCTTATTGATGATGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCACCAGAGCC
ACCAAGATCGACACCGGCAAAAGTTCCCAAACTCAATGATACACGCCGACATTTTGCTGCAACGGGATGGTGCCATCGGG
CCGTATACCACTGCGCTACAACGTCACCGAAGAGCATCAAGTTACACCGAGGAAAGGGGTGCATAGTGTTGATCATCACA
GAGCTTAGTTAGGACTGTTGTAAAGGAGTAAGAGTAGCAAAATGGAAGATTGTACATATTTGAGCTAGATCCAATAGGGG
CGTAACACAAGTCACAGATCACCAAATTGGTTTG----------------------------------------------
----------GTTGAGAGAGATTTTTTTTTTGAAAAAATATAGATGTATTATTCTTTTATGAGAAATCTTGATAGTGAAG
CTTGGTGTAAATGCCAAAAGTTTTGCGAGAAGTCCGGTTAATGTATTGGATTAAT-ACATAAGTGTCAAAGTATATAAAT
AGCAAGCGAGAATGATAAATGTATTCTGAAATGGTGTTTTTGTTACCTTCATGTTAGAAAAGGTTGCTCCCATAATCCAG
TTTCTGCGCTTTGCTCTCATGTC-TTTTTTTTGACGCAACCTCATGTCATTTTGGTGGCATTGTGAGCTTCTAGTATACC
ATCCATTTCATTGAGAAGTCTATGGATAAAGCCACAAACCTAAAAGGGATTCTTTCCTATTTGGAAAGCCTTTATGGTAT
GAAAATCAGCTTCCATAAAAGTGACATATTGACTATTAATGTGGATGTTGAGGAGGCAAACTTCTATGCTCATTTTTTTT
TGCTATAAAATGGTTAATTACCTTTCAAGAATTTGGGGGTTCCACTACATTTTAACAAGCTGAAAATAGAGGATCTCCAG
CATGTCATGGACAGATTCATTAAGAATATATCTAGATGACTAGGTTAAAAATATGTATTATAGGGGCAAACACACCTTTT
TTTCGATCATGTATCACCAGTATACCTGCTTACTT---------------------------------------------
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----
>chr1B_3
--GCATCCAACCTGTCGATCATCTGGTCACTCAATATTCTCCGATCTCCTCCACACGTGTCATTATTCATGCAAGGATCA
ACA-------------GAAAAACGACGAGCGCATAAACACGAGAACCGGCCGGAAGTTGCACCCGCTCTGCTGTGGGTGG
GAGGCGAGATTTGCTGGAACCAGATTCTGCTTGATGCTGCATGCTCTACCAGCTTCAGGTAGCACCTCGCGGCTTCCTTA
CC------AGCTTCCACTGTCACCCAGCGCTGCTG-----------GCTG------------------------------
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---------------------------------------------------------------AAAACCATTTTACTAGC
AGAAGAACATGGACCTAGCTAGAAGAGGCAAGTATCCTCTCTCGTACTA---AAACATTCAGCTGTCTGCCT----GATC
GGCATATGTTGAGTTTTCACGTGGCCTGACATCTGTCACTAGTTAATTTGCATCGCCGATCGGTCAATCACGGCCAGCAT
CGACACGGAGCGC----------CCCGCTTCAAGCAACCTCACGTTTTCCACCCGTTCCGTCGCGCGCCGGGTCAGCGTC
ACGCACGTAAAGCGGTGTGACGCGCCCACGCACCAGATTCCAGATTACCGGTCTCCCGTGGCATCTCCCTCCC-CGCCCG
TTCCGTACGAGGG-AAAGGAGAGGAAGGTGTGAATAGTCAAGCCCGGGAA-GCTCAACG----ACTCGTCTGCTGC----
--TTTTTGTTCGCTACTGCTCGCAGGCCCGCGCGTCGCGGCTTCTTCGTGCCCCGCGACAGGGTCAAGGCAAGCCAACAC
CGCGCACGATTCCGTTCCCTCCCGTGCCCGCCAT----------TATATACCCGCCGTCGCCCACCGATGCTTCGTCGTC
AACCAGTCGAGTCTCTCCAACCCCATCTCCTCTTCAACTCCTCAAACCCTCACACCGCAACTCACAGGCTCAACCAAGAA
ACCAACCACTTTGCATCGAGAGGATCGTTGCCAGTTCTTCCGTCTCTTGCTCTTGCATTGAGCGGTCCATCTTCGATTAC
CGCGGAGG-----TCGTGTCACCGATGGCTTCACCAAAGACGTGGAGGTCTATGTTCTGCTGCGTCGGAGGAGCAGGGGC
GGGGGCTGCCGCCGATGCCGACGACGAAGGGCCGTCGCCGTCTTCCACGCCGAGGAGGAGAAGAGGGGACAGAAGGGCGC
TGCTGCCGTCGTCGTCCGCGTCGACGGCGTCCAGGGTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAG
GACCTCTCGCTGACGCTGTCGGGTTCCAACCTGCACGCCTTCACCTACGCCGAGCTCAGGGCGGCCACCGCCGGCTTCTC
CCGCTCCAGGTACCTCGGCTGCGGCGGCTTCGGGCCCGTGTATAAGGGCCAGCTCGCCGCCGAGCTCCGGCCGGGCCTGG
AGGCGCAGACGGTCGCCGTCAAGTACCTTGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCT
ACTGACTCCACCATTGTTGCACTTGCACGCACGGATGCATGAGCTGTCAAATAACT--CCTCCATTATTGCGCCAACTAA
CTTCTCCAT--GATTGATTCTGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAAGAACCTGGTGAAGCTCGTCG
GGTACTGCTACGAGGAGGAGCACCGCATGCTGGCGTACGAGTTCATGGGGACCGGCAGCCTGGAGAAGCACCTGTTCAGA
AGCATCGACGGCCCCATGCCGTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGG
CGCCGACACGCCGGTCATCTTCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACTCAACTGCCCGA
TTAATCCAATCATCTCACCATTTTTGAGACTTGACCACGAGTTGGCAATAGAGCAACTTGTGGACGGATGAATGTCAAAG
TCTGACACCCGTTTCAAACAGCTGGCC-----------------------------------------------------
---------------------------------TCGCTGGAAAAGCCAGCGGCGCCATGATTAGGACTTGGAATTGGAAG
GTTCCTGGATGCCCATTTCTCACATAAATCCTACC---CACAATCAATAAATCTGTACCCACAATCA------------A
TTATGTCAGTATCAAAGCAACAGCCTGACAGATACAGCTTAGCACGATAGGAACGTTGTCATGTTAAGTACATGCATATA
TCACTCCAGTTGTGTTTGTCACAAGTTATCTTTGCCTAACCTAATCTGCTTCTTGCATTTCAGGACTATACCGCCAAGCT
GTCAGACTTCGGCCTCGCCAAGGACGGGCCCAACGGCGACGCCACTCATGTCACGACACGTATCATGGGGACACATGGAT
ATGCCGCACCAGAGTACATCATGACGGGGCACCTGACCGCCAAGAGCGACGTCTATAGCTTCGGCGTGGTGCTCCTCGAG
CTATTATCGGGTCGGCGGTCCATTGACCGTGCTCGACGTTTCAGGGAGCAAAGCTTGGTCGACTATGCCAGGCCATACCT
CAAGAAGCAGGACAAGCTGCACCGGGTCATGGATCCGGCTTTGGAATGCCAGTACTCGTGCCAGGGGGCCGAACTGGCCG
CACGAGTGGCGTACAAATGCTTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCC
ATACTCAAGATGGACGACTACCTACAAGTGGGTCCATTCGTGTTCACAGTCGTAGTGGAAAATACCGAGAAAAACGTTGG
GAGCAAAGGAAAGCTTATTGGTGACGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCAGCAGAGCC
ACCAAGATCGGCACCGGCAAAAGTTCCCAAACTCAACGATACACGCCGACATTTTGCTGCAACGGGATGGTGCCATCGGG
CCTTATACCACCGCGCTACAACGTCACCGAAGAGCATCAAGTTACACCGAGGAAAGGGGTGCATAGTGTTGATCATCACA
GAGCTTAGTTAGGACCGCTGTAAAGGAGTAAGAGTAGCAAAATGGAAGATTGTACATATTTGAACTAGATCCTGTAGGGG
TGTAACACAAGTCACGGATAGTGAAGCTGGGTGTAAATGCCAAAAGTTTTATTCTTTTATGTTTTTTTTTGCGATCTATT
ATTCTTTTATGTTGAGAGAGAATTTTTTAGA-AAAAAATATAGATGTACTATTCTTTTATGAGAAATCTTGATAGTGAAG
CTGGGTGTAAATGCCAAAAGTTTTGCGAGAAGTCCGGTTAATGT--TGGATTAATCACATAAGTGTCAAAGTATATAAAT
AGCAAGCGAGAGCGATAAATATTTCCTGAAATGGTAATTTTGTTACCTTCATGTTAGAAAAAGTTGCTCCCATAATTCGG
TTTCTGCGCTTCATCCTCATGTCATTTTTTTTGACGTAACCTCATGTCATTTTGGTGGTATTGTGAGCCTCTAGTATACC
ATCCTTTTCATTAAGAAGTCTATGGATAAAGCCAGAAACCTAAAAGGGATTCTTTCCTGTTTGGAAAGCCTTTATGGTAT
GAAAACCAGCTTCCATAAAAGTGACATATTGACTATTAATGTGGATGCTGAGCAGGCAAACTTCTATGCTCATTTTTTTC
TGCTGTAAAATGGTTCATTTCCTTTCAAAAATTTGGGGGTTCCCCTACATTTTAACAAGCTGAAAATAGAGGATCTGCAG
CATGTCATGGACAGATTCATTAAGAATATATCTAGATGACTAGGTTAAAAATATGTCTTATAGGGGCAAACCCACCTTTC
TA-CGATCATGTATCACCAGTATACCTGCTTACTT---------------------------------------------
--------------------------------------------------------------------------------
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----
>chr5D_1169
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-----------------------------------------------AGCCTGAGCTCGTCGGGGACGCTGTCCCCGGAG
GACCTGTCGATCACGCTGTCCGGGTCCAACCTGCACGCCTTCACCTACGCCGAGCTCCGCGCCGCGACCGGGAGCTTCTC
GCGCACCCACTACCTCGGCTGCGGCGGCTTCGGCCCGGTCTACAAGGGCGCCGTCGACGACAAGCTCCGCCCCGGGCTGG
CCGCGCAGCCCGTCGCCGTCAAGTACCTCGACCTGGACTGCGGCACGCAGGGCCACAAGGAGTGGCTGGTGAGTGCCCAA
CAGAGTGCAATGCACTCTCAA---GCACGATCAGATGCTTGGCAGATCAATTTCGAAGCCTGGTCGATGAACAGCTAGCT
CATTATGTG--GGTTGTTCTTGCAGGCTGAGGTATTCTTTCTTGGGCAACTGAGGCACAAGAACCTGGTGAAATTGATCG
GGTACTGCTACGAGGACGAGCACCGGATGCTCGTGTACGAGTTCATGAACGCCGGGAGCCTGGAGACGCACCTCTTCAAA
AG------------------------------------------------------------------------------
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----
>SNPs
------------------------------S------------------------------------S-------S-S--
SS-SSSSSSSSSSSSS---S----------------------------S----------------------------SS-
--S-------------------------------------------------------------S---------------
-------------------------S---------SS-S-SSSSSS----------------------------------
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----------------------------------------------S------------------------SSSSS----
------------S--------------------------------------------S----------------------
-S--------------------------------S---------------------------------------------
-----------------S---------S---------------------------------------S------------
-------------------------------------------S---------------SSSS-------------SSSS
SS------------------------------------------------------------------------------
-S-----------------------------------------------S------------------------------
-----------------------------S-------------S-------------S--S-------------------
-S------S---------------------------------SS-------------------S----------------
--------------S-------------------------------S-----------------------SS-S------
S-S---------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
---------SS-----S---------------------------------------------------------------
-S--------S-----------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S------S--------------------------------------------------------------
--------------SSSSSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
-----------------------S--------------------------------------------------------
---------------------------S-----------------------------------------S----------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
---------------------------------------------------S-------S---------S----------
--------------------------------------------------------------------------------
---------------------------------S-------------------------------S-------S---S--
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
-----------------------------------------------S--------------------------------
---------------------S--------------S-----------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S------------------------S-------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
S-----------------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS
>forward_3033
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-----------------------------------------------------AACATTCAACTGGCTGCCCT-------
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----
>reverse_4733
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------------GTTTGCTAGGGTTTGCTGGC------------------------------------------------
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----
>forward_4203
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-----------------------TGCACGTACGGATGCATGAT-------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_5647
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----------------------------------------------TGACATTTTGCTGCAACGGG--------------
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----
>forward_5350
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--------------------------------------------------AATACTCGTCTCAGGGGGCT----------
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----
>reverse_6684
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-------------------------------------------AGAGGAAAAGCGAGTTCGGG-----------------
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----
