>input_sequence_39390
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--------------------------------------------------------------------ATGGACGTGCTG
TCGTCTGCGAAGCGCGCCCTCCCGTGGGGCCGCACCTCGGCCGGCGGGGTCATCGGCGGCCTCCGAGCTCTACTCGGGAC
GGTGCGTACCCGCGCGCTTCTCGTGCTTTTGCAGTTGAGATCCCCGTC------------TACAAAGCATGGCCGCCGGG
CCTGGCGCTTTTACTCTTCTTGTTTCCGTTGCGG----AGAAGAGCATTTTCCCGTCTACTAAGATTTATCCATGGCCAC
GATGCTCTCCCGTCCCGCCTCCATGAGGATGAGGATGACGATGAGGTCGATCGGAACTCACAGTAGGCGCCTTCTCGGTG
TGCAGGACGGAGGCGGCGGCCGCTCTCTTCTCCCGTCCCGGTGGAAGTCGTCGCAGCCGCAGCTGGACCCCGTCGACAGG
TGCGTGAGTGACATGCAGCAGGTTCATCGTAAATTACTTTCCGTGGTTGGTTTCGATTCGTTCGCA----GTTCGATCGC
CAATGGCTTTTACCATTTTGTGCCGTTCGTCGCACTCAAACTCAATGCTTGTGCCGTCGCCACCGGGGCATCCGTGTGCG
GTTTGGCTTGGCTGCATGCAGGTCCGACGAGGAGGGCGGCGGCGACATCGACTGGGACAACCTCGGCTTCGGGCTGACCC
CGACCGACTACATGTACGTCATGCGGTGCACGCAGGAGGAGGGCGGCTTCTCCCGCGGCGAGCTCGCCCGCTACGGCAAC
ATCGAGCTCAGCCCCTCCTCCGGCGTCCTCAACTACGGGCAGGGGCTGTTCGAGGGGCTCAAGGCGTACCGGAGGGCGGA
CGGGCCCGGGTACACGCTGTTCCGGCCGGAGGAGAACGCGCGGCGGATGCAGCACGGCGCCGGGCGCATGTGCATGCCTT
CCCCGTCCGTCGAGCAGTTCGTGCACGCCGTCAAGCAGACCGTCCTCGCCAACAAGCGCTGGGTACGT-------GGTCA
GCATCGATTTGTTCCTTTATTCACGTGACGTGAGTGCACGCCATGCTCATGAGCCCTCCATGGCTGACCTCCGCACTGCA
ACCACCCCTCGCGTACGTTGGTTTCAGGTGCCACCGCAAGGAAAGGGAGCGCTGTACCTCAGGCCGCTGCTCATCGGGAG
CGGGGCGATCCTCGGGCTGGCGCCGGCGCCCGAGTACACCTTCATGATCTACGCCGCGCCCGTGGGCACATATTTCAAGG
AAGGCATGGCGGCGATAAACCTGCTGGTCGAGGAGGAGATCCACCGCGCCATGCCGGGCGGCACCGGCGGGGTCAAGACC
ATCTCCAACTACGCGCCGGTGAAAATCCTTTAGCCGGTAACT-TCTTCTTCAGGTGAATTTCCAGAAAATGTGACTGACC
GACCGGTGTTTTTATCCCATCGTCAGGTGCTCAAGGCGCAGATGGACGCGAGGAGCAAGGGGTTCGCGGACGTGCTGTAC
CTGGACTCGGTCCACAAGAGGTACGTGGAGGAGGCCTCCTCCTGCAACCTCTTCGTCGTGAAGGGCGGCGCCGTCGCGAC
GCCGGCGACGGCGGGGACCATCCTGCCGGGGGTCACGCGCAGGAGCATCATCGAGCTCGCCCGAGACAGCGGCTACCAGG
TCGATCGATCACTCCACTCCAC-TCCGCCGCTACTGTCCATCACCCAACTGTGCCGATGACAACGAACTGAAGCTTGTGT
TGTGTGCTGTCGAG--CAGGTGGAAGAGCGCCTCGTCTCCATCGACGATCTGATCAGTGCAGACGAAGTGTTCTGCACGG
GAACGGCCGTCGGCGTCACCCCGGTGTCCACCATCACCTACCAAGGGACAAGGTAAGTCGATCTCATGCAACTCGTCCGC
TGAGCCGGGGCAAAAAGATCCAAGATGTCTGCGCGATTCAGTGCTGAGATGTGTACTGATTTTTGGGCGTGCGTGCAGGT
ACGAGTTCAGGACCGGAGAAGACACGCTGTCGAAGAAGCTGTACACGACTCTGACGTCGATCCAGATGGGCCTGGCGGAG
GACAAGAAAGGATGGACGGTTGCGGTTGATTGA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr4D_1_TraesCS4D01G236800
GAGGCCTTTATTTTTGAAAAAATCAAATTCAAACTTTTATGTTTCAAAAAATTCTGAAAAAATATGCATGTATGTAAGGA
TGTAACCCACATGTGTGTAAAATTTCATGATGAAATACATTGAAATGCAACATGTACAAAAAAGACAAATTCATGGTCTG
GGAGGATGAATAGTATCATGTGTTAAACAACCCCAGATTTGTCTTTTTTGCACAGCCCTCATTTCAACATGTTTGCCCTG
AAAATTTACACACATGTGTGTTATGCCTTCATGTATACCAGTAAAAAAATTTAGAATTTTTTGAAATGTAAAAAAATATG
AATTTCGATGAAATTTGAATTTTGAATATGGAGGCCTCCAGTGAGCTCGGTCACCAAAGGCAATTTCCGTATAGATTGGA
AGTTTTTTTGGAAAAAAAAAAAGCTTGGCAGACGCCATCACGCCTTACACGCGGCAGAGCAGCGCGACTACGACTTCCTC
GTTCCCAGGAGGTGCCGTGCCAGGCGCGGCTGTACTCTGTCACTGCCTCGCGGGGTCCACTCAGTGCCTGGGCCCACGGG
TCAATTGCCATC-------------TCCGTCGATGGTTT-TGTCTCGATCCAGGAAAAGCAAGTTTGCTGCTCCTAGAGC
TTTGGCGCACGCTCGATCCCCCGTAACAGGAGTCCCGTAACAGGGCACAGTCTTTGTCAAACATT-GCCAAATATCTTTG
CCAAACATTACCGTATCCTGCTAA----------TGCATGTGTTAATTCGCCATAAAAAACCAATGCATGTGTTTCC---
----------TAAACCAATGCATGTGGCCTTCTATAAGGGTAGGATACAGCAGGGCAAATCGAACAC-TTGCCAAATTCT
CCACGACCTATATAGAAACCTCTTTACGAACAC-TTGCCATTTTAACCCACTGCCACTGGTATAGGTGCCGACGT-----
-GCTGTGCTCGC--------------------TTGCAAACCATTGCTC--------------------------------
----------TCTTGAACAACTTTGGCGAGCGATCCAGCTAGCGGGCCGGCCGGACGTGCGTGCGTGCATGGACGTGCTG
TCGTCTGCGAAGCGCGCCCTCCCGTGGGGCCGCACCTCGGCCGGCGGGGTCATCGGCGGCCTCCGAGCTCTACTCGGGAC
GGTGCGTACCCGCGCGCTTCTCGTGCTTTTGCAGTTGAGATCCCCGTC------------TACAAAGCATGGCCGCCGGG
CCTGGCGCTTTTACTCTTCTTGTTTCCGTTGCGG----AGAAGAGCATTTTCCCGTCTACTAAGATTTATCCATGGCCAC
GATGCTCTCCCGTCCCGCCTCCATGAGGATGAGGATGACGATGAGGTCGATCGGAACTCACAGTAGGCGCCTTCTCGGTG
TGCAGGACGGAGGCGGCGGCCGCTCTCTTCTCCCGTCCCGGTGGAAGTCGTCGCAGCCGCAGCTGGACCCCGTCGACAGG
TGCGTGAGTGACATGCAGCAGGTTCATCGTAAATTACTTTCCGTGGTTGGTTTCGATTCGTTCGCA----GTTCGATCGC
CAATGGCTTTTACCATTTTGTGCCGTTCGTCGCACTCAAACTCAATGCTTGTGCCGTCGCCACCGGGGCATCCGTGTGCG
GTTTGGCTTGGCTGCATGCAGGTCCGACGAGGAGGGCGGCGGCGACATCGACTGGGACAACCTCGGCTTCGGGCTGACCC
CGACCGACTACATGTACGTCATGCGGTGCACGCAGGAGGAGGGCGGCTTCTCCCGCGGCGAGCTCGCCCGCTACGGCAAC
ATCGAGCTCAGCCCCTCCTCCGGCGTCCTCAACTACGGGCAGGGGCTGTTCGAGGGGCTCAAGGCGTACCGGAGGGCGGA
CGGGCCCGGGTACACGCTGTTCCGGCCGGAGGAGAACGCGCGGCGGATGCAGCACGGCGCCGGGCGCATGTGCATGCCTT
CCCCGTCCGTCGAGCAGTTCGTGCACGCCGTCAAGCAGACCGTCCTCGCCAACAAGCGCTGGGTACGT-------GGTCA
GCATCGATTTGTTCCTTTATTCACGTGACGTGAGTGCACGCCATGCTCATGAGCCCTCCATGGCTGACCTCCGCACTGCA
ACCACCCCTCGCGTACGTTGGTTTCAGGTGCCACCGCAAGGAAAGGGAGCGCTGTACCTCAGGCCGCTGCTCATCGGGAG
CGGGGCGATCCTCGGGCTGGCGCCGGCGCCCGAGTACACCTTCATGATCTACGCCGCGCCCGTGGGCACATATTTCAAGG
AAGGCATGGCGGCGATAAACCTGCTGGTCGAGGAGGAGATCCACCGCGCCATGCCGGGCGGCACCGGCGGGGTCAAGACC
ATCTCCAACTACGCGCCGGTGAAAATCCTTTAGCCGGTAACT-TCTTCTTCAGGTGAATTTCCAGAAAATGTGACTGACC
GACCGGTGTTTTTATCCCATCGTCAGGTGCTCAAGGCGCAGATGGACGCGAGGAGCAAGGGGTTCGCGGACGTGCTGTAC
CTGGACTCGGTCCACAAGAGGTACGTGGAGGAGGCCTCCTCCTGCAACCTCTTCGTCGTGAAGGGCGGCGCCGTCGCGAC
GCCGGCGACGGCGGGGACCATCCTGCCGGGGGTCACGCGCAGGAGCATCATCGAGCTCGCCCGAGACAGCGGCTACCAGG
TCGATCGATCACTCCACTCCAC-TCCGCCGCTACTGTCCATCACCCAACTGTGCCGATGACAACGAACTGAAGCTTGTGT
TGTGTGCTGTCGAG--CAGGTGGAAGAGCGCCTCGTCTCCATCGACGATCTGATCAGTGCAGACGAAGTGTTCTGCACGG
GAACGGCCGTCGGCGTCACCCCGGTGTCCACCATCACCTACCAAGGGACAAGGTAAGTCGATCTCATGCAACTCGTCCGC
TGAGCCGGGGCAAAAAGATCCAAGATGTCTGCGCGATTCAGTGCTGAGATGTGTACTGATTTTTGGGCGTGCGTGCAGGT
ACGAGTTCAGGACCGGAGAAGACACGCTGTCGAAGAAGCTGTACACGACTCTGACGTCGATCCAGATGGGCCTGGCGGAG
GACAAGAAAGGATGGACGGTTGCGGTTGATTGATTAGGATAACAGCGTGGGCGCATGCGGCGCCGGAAGCATTCATCAGC
ATTTCTTATCA--TGTCTTGCCAATGTGAATAATAATAGTCATGGTGATGATATCTCGGGGATGTCTCGGCCCCCAAGGG
CGATGGTCTCTCTGATGCTACTGGTTTCTTGGAAAATATGGAAAGAGAGAAATGCACGGGTGTTCCGTAACAACGCAGTT
CGTCATGGGTGTTCTTGTTGCTCGAACTAAAGAGGAAGCTTCTCTGTGGTGTGGTGCCTAGCCGGGGTGAAATTTTTGTG
TAATATTATGCCGCAAGAGTGAGGCTTGTAATTCGGCCCGAGGCCTAGACTCTAAAAAA---CTTTTTATTCAATGAAAA
TGGTAAGCCTTTTGCCTTGTTTTTATTTTAAATGATGATGATATCTCGTGTTAGAAGATACGTATCCCAG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TCTTCAGCGAGTTCAAATTTGAGCACGGAAAAAAG---GCCAATGTTGATCCTGCTTGACACTTACGAA
TTTGCCAAATACTCCTTTCGTTCTTAAATATTTATCATTTTAGAGATTTTAAATGGACTGCCACATGTAGTCACTTGTTG
AAATCTTCAGAAAGACAAATATTTAGCAACGGAGAGAGTAGATCCTTTTCATTAGCAAGTTCAAATTTGGGCACGCAAAG
TAGCTAACGTTGATCCTGACTGACACCAACCATTTGCCAAATAGATCGTTTTCATGCATGACAACCTGGCAGTCGCATCG
AAGTTACAGTTACAGAGACATTGCATGGAGACTCGATGTATTTTCATAGTTTGATACGTTCACGTTGTTGCTCTCTGACA
ATTTA----CAGAGACCAACAAGTGTG--GTTTTTCTGGTG----GCGCAGCAGGCCAAACAACAAGCAAACAACGGCAC
GA-----TGCGGCACATGCCACATGG------TAGGCAGGAAAGAAACGTATGCCAAAGTGCAAGTAGTCCATTTTTCTT
AGGCTCCACGTACGCATTGCCAATCCAGACCCAACAAGCACGT
>chr4B_388
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CGTATAGATTGGA
AGTTTTTT--GG-AAAAAATTAGCTGGGCAGACGCCATCACGCCTTACACGCGGCAGAGCAGCGCGACTACGACTTGCTC
GTTCCCAGGAGGTGCCGTGCCAGGCGCGGCTGTACTCTGTCACTGCCTCGCGGGGTCCACTCAGTGCCTGGGCCCACGGG
TCAATAGCCACGGCACCCATCCATGTCCGTCGATGGTTT-TGTCTCCGTCCTGGAAAAGCAAGCTTGCTGCTCCTATAGC
TTTGGCACAGGCTCC------------------CCCGTAGCAGTTCACCGTCTTTGTCAAACATT-GGCAAATATCTTTG
TCAAACATTGCCGAATCCTGCTAACGCATGCTAATGCATGTGTTAATTCGCCATAGAAAACCAATGCATGTGTTTCATAA
AAAGGTATCATAAACCAATGCATGTGGCCTTCTATAAGTGTATGATACAGCACGGCAAATCGAACAC-TTGCCAAATTCT
CCACGACCTATATAGAAACCTCTTTATGAACGG-TTGCCATTTTAACTCGCTG--------------------GT-----
-GCTGTGCTCTCGTTCGTCCGAGTACCTAGCGGCTCCTGCTGAGCATAGCTCGCAAAACGTATCGGCTGGCCATTATATT
GCTCGCGAGTTCTTGAACAACGTTGGCGATCGATCTAGCTAGCGGGGCGCCCGGGCGTACGTGCGTGCATGGCTGTGCTG
TCGTCTGCGAAGCGCCTCCTCCCGTGGGGCCGCGCCTCGGCCGGCGGGGTCAGCGGCGGCCTCCGAGCTCTACTCGGGAC
GGTGCGTACCCGCGCGCTTCTCGTGCTT--GCAGTTGAGATCCCATCAACAAGTACTACGTACAAAGCATGGCCGCCGGG
CCTTGCT-TTTTACTCTTCTTGTTTCCGTTGCGG----AGAAGAGCATTTTCCCGTCTG---AGATTTATCCATGTCCAC
GATGATCTCCCGTCCCGCCTCC------ATGAGGATGACGATGAGATCGATCGGAACTCACAGTAGGCGCCTTCTCGGTG
TGCAGGACGGAGGCGGCGGCCGCTCTCTTCTCCCGTCCCGGTGGAAGTCGTCGCAGCCGCAGCTGGACCCCGTCGACAGG
TGCGTGGGTGACATGCAGGCTCGTCG-------TTCCTTTCCGTGATTGGTTTCGATTCGTTTGCAGGTCGTTCGATCGC
CAATGGCTTTTAACATTTTGCGCCGTTCGTTTACACTCAA-TCAACGCTTGTGCTGCCGCCACCGGGGCATCCGTGTGCG
GTTTGGCTTGGCTGCA----GGTCCGACGAGGAGGGCGGCGGCGACATCGACTGGGACAACCTCGGCTTCGGGCTCACCC
CGACCGACTACATGTACGTCATGCGGTGCTCGCAGGAGGAGGGCGGCTTCTCCCGCGGCGAGCTCGCCCGCTACGGCAAC
ATCGAGCTCAGCCCCTCCTCCGGCGTCCTCAACTACGGGCAGGGGCTGTTCGAGGGGCTCAAGGCGCACCGGAGGGCGGA
CGGGCCCGGGTACATGCTGTTCCGGCCGGAGGAGAACGCGCGGCGGATGCAGCACGGCGCCGGGCGCATGTGCATGCCGT
CCCCGTCCGTGGAGCAGTTCGTGCACGCCGTCAAGCAGACCGTCCTCGCCAACAGGCGCTGGGTACGT---ACGTGGTGA
CCATCGATTTGTTCTTTTATTCACGTGACGTGAGTGCACGCCATGCTCATGAGCC-TCTATGGCTGATCTCTGCACTGCA
ACCACCGCTGGCGTACGTTGGTTTCAGGTGCCGCCGCAGGGAAAGGGAGCATTGTACATCAGGCCGCTGCTCATCGGGAG
CGGGGCGATCCTCGGGCTGGCGCCGGCGCCGGAGTACACCTTCATGATCTACGCCGCGCCTGTGGGGACATATTTCAAGG
AAGGCATGGCGGCGATAAACCTGCTGGTCGAGGAGGAGATCCACCGCGCCATGCCGGGCGGCACCGGCGGGGTCAAGAGC
ATCTCCAACTACGCGCCGGTGAAAATCTTTTAGCCGGTAATT-TCTTCTTCAGGTGAATTTCCAGAAAATGTGACTGACC
GGCTTGTGTTTTTATACCATCATCAGGTGCTCAAGGCGCAGATGGACGCGAGGAGCAAGGGGTTCGCGGACGTGCTGTAC
CTGGACTCGGTGCACAAGAGGTACGTGGAGGAGGCCTCCTCCTGCAACCTCTTCGTCGTGAAGGGCGGCGCCATCGCGAC
GCCGGCGACGGAGGGGACCATCCTGCCGGGGGTCACGCGCAGGAGCATCATCGAGCTCGCCAGAGACAGCGGCTACCAGG
TCGATCGATCAATGCACTCCAC-TCCGCCACTACCATCCACCACTCAACTGTACCGGTGACAACGAACTGAAGCTC-TGT
TATGTGCTGTCGAG--CAGGTGGAAGAGCGCCTCGTCTCCATCGACGATCTGATCAGTGCAGACGAAGTGTTCTGCACGG
GAACGGCCGTCGGCATCACCCCGGTGTCGACCATCACCTACCAAGGGACAAGGTAAGTCGAACTCATGCAATTCGTCCGT
TGAGCCGGGGCAAAAGGATCCAAGATGTCTGGTCGATTCAGTGCTGAGATAT----------------GTGCGTTCAGGT
ACGAGTTCAGGGCTGGGGAGGACACGCTGTCGAAGAAGCTGTACACGACTCTGACATCGATCCAGATGGGCCTGGCGGAG
GACAAGAAAGGATGGACGGTTACGGTTGATTGATTAGGATAACAGCGTGGGCGCATGCGGCGCCAGGAGCATTCATCAGT
ATTTCTTATTA--TGTCTTTCCAATGTGAATAATAATAGTGATGGTGATGATATCTCGGGGATGTCTCGGCCCCGAGGGG
CGATGGTTTCTCTGATGCTACTGATTTCTTGGAAAATGTGGAAAGAGAAAAATGTACGTGTGTTCCATAACAACGTAGTT
CCCG-TGGGTGTTCTTGTTGCTCGAACAAAAGAGGAAGCTTCTCTA-----TGGTGCCTAGCTAGGGTGAAATTTTTGTG
TAATATTATGTCACGACAGTGAGGCTTGTAATTCCGCCCTTGGCCTAGACCCTAAAAACCTTGTTCTTATTCAATGAAAA
TGGTAAGTCTTTTGCCTTGTTT-AAAAA-AAATGATGATGATATCTCGTGTTAGAAGATACGTATGTCAA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TCTTCACCATGTTCGAATTTTTGCACGGAAAAGAA---GCTAATGTTGATCCTGCTTGACACTTGCGTA
TTTGCCAAATAGATCG----------------------------------------------------------------
---------------------------------------------TTTTCATTAGCAAGTTCAAATTTGGGCACGCAAAG
TAGCTGATGTTGATCCTGATTGACACCTACCATTTGCCAAATAGATCGTTTTCAAGCATGACAACTGGGCAGTCGCAGCG
ATTTTACAGTT--AGAGACATTTCATGGACATTCGATGTACTTTGATAGTTTGATACGTTCACGTTGTTGCTCTCTGACA
ATTTA----CAGAGGCCAACAAGTGTGACGTTTTTCG----------------GGCCAAACAACAAGCAAACAACGGCAC
GACTGCATGCGGCACATGTCACATGA------TAGGCATGAAAGAAACGTATGCCAAAGTGCAAGTAGTCCATTTTTCTT
AGGCTCCACGTACGCATTGCCAATCCAGATCCAAC--------
>chr4A_390
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TACAGAATGGA
AGTATTTTCGGG-AAAAAATTAGCTCGGCAGACGCCATCACGCCTTACACGCGGCAGAGCAGCGCGACTACGACTTCCTC
GTTCCCAGGAGGTGCCGTGCCAGGCGCGGCTGTACTCCGTCACTGCCTCGCGGGGTCCACTCAGTGCCTGGGCCCACGGG
TCAATTGCCATC-------------TCCGTCGATGGTTTTTGTCTCCATCCAGGAGAAGCAAGTTTGCTGCTCCTAGAGC
TTCGGCGCACGCTGGATCCCCCGTAACAGGAGTCCCGAAACAGGGCACAGTCTTTGTCAAACATCCGCCAAATATCTTTG
CCAAACATTACCGTATCCTGCT----------AATGCATGTGTTAGCTCGCCATAAAAAACCAATGCATGTG--------
--------------------------GCCTTCTATAAGGGTCGGATACAGCACGGCAGATCCAACGCTTTGCCAAATTCT
CCACGACCTATATAGAAACCTCTTCACGAACACTTTGCCATTTTAACTCACTG--------------------GTATAGG
CGCTGCGCTCTCGTAGCGGGCTGTGTATAGCTTTGCGAACCATTGCTCGCCGTGAAGGGT--------------------
-----CGAGTTCTTGAACAGCTTTGGCGATCG-------------------CGGGCGTACGTGCGTGCATGGCTGTGCTG
TCGTCTGCGAGGCGCCTCCTCCCGTGGGGCCGCGCCCCGGCCGGCGGGGTCAGCGGCGGCCTCCGAGCTCTACTCGGGAC
GGTGCGTACCCGCGCGCTTCTCGTGCTTTTACAGTTGAGATCCCCGTC------------TACAAAGCATGGCCGCCGGG
CCTGGCGCTTCTACTCTTCTTGTTTCCGTTGCGAGAGAAGAAGAGCATTTTCCCGTCTACTAAGATTTATCCATGTCCAC
GATGCTCTCACATCCTGCCTCC------ATGAGGACGATGATGAGGTCGATCGGAACTCACAGTAGGCGCCTTCTCGGTG
TGCAGGACGGAGGCGGCGGCCGCTCTCTTCTCCCGTCCCGGTGGAAGTCGTCGCAGCCGCAGCTGGACCCCGTCGACAGG
TGCGTGAGTGGCATGCAGGCTCATCG-------TTCCTTTCCGTGATTGGTTTCGATTCGTTTGCAGTTTGATCGATCGC
CAATGGCTTTTAACATTTTGCGCCGTTCGTCACACTCAAACTTAACGCTTGAGCTGTCGCCACCGGGGCATCCGTGTGCG
GTTTGGCTTGGCTGCA----GGTCCGACGAGGAGGGCGGCGGCGACATCGACTGGGACAACCTCGGCTTCGGGCTCACCC
CGACCGACTACATGTACGTCATGCGGTGCTCGCAGGAGGAGGGCGGCTTCTCCCGCGGCGAGCTCGCCCGCTACGGCAAC
ATCGAGCTCAGCCCCTCCTCCGGCGTGCTCAACTACGGGCAGGGGCTGTTCGAGGGGCTCAAGGCGTACCGGAGGGCGGA
CGGGCCCGGGTACATGCTGTTCCGGCCGGAGGAGAACGCGCGGCGGATGCAGCACGGCGCCGGGCGCATGTGCATGCCGG
CCCCGTCCGTCGAGCAGTTCGTGCACGCCGTCAAGCAGACCGTCCTCGCCAACAGGCGCTGGGTACGTACAACGTGGTGA
CCATCGGTGTGTCCTTTTATTC-----ACGTGAGTGCACGCCATGCTCATGAGCCCTCCATGGCTGATCTCCGCACCGCA
ACCACCGCTGTCCTACGTTGGTTTCAGGTGCCGCCGCAGGGAAAGGGGGCGCTGTACCTCAGGCCGCTGCTCATCGGGAG
CGGGGCGATCCTCGGGCTGGCGCCGGCGCCCGAGTATACCTTCATGATCTACGCGGCGCCCGTGGGCACATATTTCAAGG
AAGGCATGGCGGCGATAAACCTGCTGGTCGAGGAGGAGATCCACCGCGCCATGCCGGGCGGCACCGGCGGGGTCAAGACC
ATCTCCAACTACGCGCCGGTAAACATCTTTCAGCCGGTAAATATCATCTTCGGGTGAATTTCCAGAAAATGTGACTGACC
GGCCAGTGTTTTTATCCCATCGTCAGGTGCTCAAGGCGCAGATGGACGCGAGGAGCAAGGGGTTCGCGGACGTGCTGTAC
CTGGACTCGGTCCACAAGAGGTACGTGGAGGAGGCCTCCTCCTGCAACCTCTTCGTCGTGAAGGGCGGCGCCGTCGCGAC
GCCGGCGACGGAGGGGACCATCCTGCCGGGGGTCACGCGTCGGAGCATCATCGAGCTCGCCAGAGACAGCGGCTACCAGG
TCGATCGATCAATGCACTCCACGTCCACCACGACTGTCCACCACCCAACTGCGCCGATAACAACGGACTGAAGCTTGTGT
TGTGTGTTGTCTTCTTCAGGTCGAAGAGCGCCTCGTCTCCATCGACGATCTCGTCAGTGCCGACGAAGTGTTCTGCACGG
GAACGGCCGTCGGCGTCACCCCGGTGTCCACCATCACCTACCAAGGGACAAGGTAAGTCCATCTCATGCAATTCGTCCGT
CGAGCCGGGGCAAAAAGATCCAAGATGTCTGTTCGATTCAGTGCTGAGATGTGTACTGATTTTTGGGCGTGCGTGCAGGT
ACGAGTTCAGGACCGGGGAGGACACGTTGTCGAAGAAGCTTTACACGGCTCTGACGTCGATCCAGATGGGCCTGGCGGAG
GACAAGAAGGGATGGACGGTCGCGGTTGATTGAGTAGGATAACAGCGTGGGCGCATGCGGCGCCGGAAGCATTCATCAGC
ATTTCTTATCATGTGTCTTGCCAATGTGAATAATAATAGTGATGGTGATGATATCTCGGGGATGTCTCGGCCCGAA-GGG
TGATGGTTTCTCTGATGCTACTGATTTCTTGGAAAATATGGAAAGAGAGAAATGCACGTGTGTTCCGTAACAACGCAGTT
CCCG-TGGGTGTTCTTGTTGCTCGAACTAAAAAGGAAGCTTCTCTGT----------------GGGGTGACATTTTTGTG
TAATATTATGCTG--AGAGTGAGGCTTGTAATTCGGCCCCTGGCCTAGACCCTAAAAAGATTCTTCTTATTCAACGAAAA
TGGTAAGCCTTTTGCCTTGTTTCAAAAA-AAATGATGATGATATCTCGTGTTAGAAGATACTCCCTTCGTTTCAAATTAC
TCGTCGTAGAAATGGATGTATCTAGAACTAAAATACATCTAGATACATACATACCTACGACAAGTAATTCGGAATGAAGG
GAGTACGTATCAAGTTCAAATTTGGGCACAGAAAGAGAGAAGCTAATGTTGATCCTGCTTGACACTTGCGTTTTTGCCAA
ACAGACCGTTTTCATTAGCAAGTTCAAATTTGGGCACAGAAAGAAAGAAGCTAATGTTGATCCTGCTTGACACTTGCGTA
TTTGCCAAACAGACCG----------------------------------------------------------------
---------------------------------------------TTTTCATTAGCAAGTTCAAATTTGGGCACGCAAAG
TAGCTACTGTTGGTCCTGATTGACACCTACCATTTGCCACATAGATCGTTTTCATGCATGACAACCTGGCAGTCGCATCG
ACGTTACAGTTACAGAGACATTTCATGGACATTCGGGGTACTTCGATAGTTTGATACGTTCACGTTGTTGCTCTCTGACA
ATTTATTTACAGAGACCAACAAGTGTGAGGTTTTTCTGGCGGCGCGCGCGGCAGGCCAAACAACAAGCAAACAACGGCAC
GACTGCATGCGGCACATGCCACATGGTAATGGTAGGCAGGAAAGAAACGTATGCCAAAGTGCAAGTAGTCAATTTTTCTT
AGGCTCCATGTACGCGCTGCCAATCCAGACCCAAC--------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
--------S--SS------SS----S------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
----------------------------------------------------S---------------------------
-----------------------------------------------S-----SSSSSSSSSSSSSSSSSSSS-------
----------S-------------------------S-------------------------------------------
-----------------------------S-----S----------S--S----S---S-------------SS------
---------------SS----------------S------------------S---------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------------SSSSSS----------------------------------------------------
--------------------------------------------------------------------------------
------------------SSSSS--SSSSSSSS--S---------S----------------S-----------------
------------S-------S----------S-------------S--------S-------------------------
----------------SSSS-------------------------------------------------------S----
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------------------------------------S-
------------------------------------------------------S-----------------------S-
S-------------S----------------------------------------------------S------------
------S--S----------------------S-----S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------------S---------------------------------------
-S--S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-------------------------------------------------S------------------
-----------S-S---------------S----------S---------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S-------S
-------------------------------SS-----------------------------------------------
----------------S--S------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------S-S---
-------S---------------S----------------------------------S---------------------
-SSSS------------------------------------------SSSS-----------S-----------------
--------------S------------------------SS---------S-------S------S--------------
----------------------SS-SSSS------------------------------------SS--S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------S------------S-----S-----------------------S--S-
-----------SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
-------S-----------S-------S----------------------------------------------------
-S--------------------S------S-S--------S---S-----------------------------------
---------------------------------------S---------S------------------------------
--------------------------------------------------------------------------------
-----------------------------------SSSSSSSS
>forward_379
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AGTGAGCTCGGTCACCAAAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_1613
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCATTTTGTGCCGTTCGTCG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------
>forward_953
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CCACTGGTATAGGTGCCGAC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_2992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------CGCGATTCAGTGCTGAGATG-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>forward_1546
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGTGACATGCAGCAGGTTCA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_3277
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AGGG
CGATGGTCTCTCTGAT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
