>input_sequence_39354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------ATGCGCGCCCTTCTCTCCGTCCGCCTCCGGCGCCTGCTC
TCTCCGCCCCTAAGCGCGAGGCCCTCCTCTTCCTCCTCCTC------------------------CGGAACCCACGAGAT
CCCCACCGTCTACTCCTTCCTCCAGCCCAACATCTTCGCGCCGCGCCCCAGGCCCCAACCGCCGCCGCCGCCGCCGTCAC
CCCCCGCTCCGGGCCCCGCGCCCAAAACCCTGCCCGTCGCGGACGCCGGCGCGCTCGAAGAAAGCCTGCTCGCCGCCGCC
GCCGAGGGCCGCTCGGACGACGCGTGGCTCGTGTTCAAGTCCCTGGCGGCGGCCTCCCTCTCGCCGTCGCCTCCCGCCGC
GGCGGCCCTCGTATCCCACCTCGTCGCGGACAACCACCGCCTCGGCCTCAAGCGCGCCTTTGCCGCCGCCGTCTTCCTGC
TGGAGAAGAGCCCCCATGCCTCCCCCCTCCCGGAGGCCGCGCTGGAGGCCCTCTTCTCCTCCCTCGCCGCCTCGGGCTCC
GCGGCCCCGGCGCTGGCCCTCGCGCGTGCTCTCCTCGGCTGCGGGCGCCGCCTGCCGGCTTTCTCTGCCTGGGGCCTTCC
GCTGATAGAGCTCACCCGCGCTGACACGGGCTCCTTTGCGGCCTTCTTGAAGGTGTTTGAAGAGGCCTGCAAGCTCATGG
CGGAGGAGAAGTCTCCGTCTGTGGCAGTGGTCATGCGGCCTGATCTCGCTGCCTGCAATGCTGTTCTTGATGGATGCTGC
CGCAGGCTCGGCTCAGTCACGGATGCTGAGAAGGTCTTGGAGATTATGCCAGCTGTCGGGGTGTCGCCAGACGTGGAGAG
CTTTGGACATCTTGCCTTCTTGTATGCGTGGAGATCTGTTCCAAGCCGGGTCGATGAGCTCGATAAGTTGCTGGAAGCTC
TGGGCTTCAGCAAGAAAGGATTTTTCAAGAATTTAGTGAGTGGGTATTTGAAGTCTTGCAGCTTTGAGTCTGTTTCGTCG
ATCATACTTCGTGCGGTGGAGGAGAGAAGAGTTGGGGATGGCAATCCATTTGATGATGGGTGCTATACCGAGGTCGCACA
ATGCTTTGTTGACAATGCAAGGATCAGGGAATTGGCTCAGTTGATCTTCCAAGCACAAGAGATTGAGTCGGCACATCAAT
TGCTGGTAGTTGATGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTCGGACTTGGTCTATTGAACAAGGCTCATAAC
ATACTTGATGAAATGACTGCTCAAGGAGCTTCTGTGGGACTAGCTATATACACCCCAATCTTGAAAGCATATTGCAAGGA
GCAGAAGACTGCAGAGGCTGCACAGCTTGTGGCGGAGATTAGCGCAGCAGGGCTACAGCTTGATGCTGGCAGTTATGATG
CTCTTATTGATGCTTCCATGACAGCCCATGATTTCCAGTCTGCATTTGCACTTTTCAAAGATATGAGGGAGGCGAGGCTA
CCAGATCTTAGGACAAGCTATCTTACTATAATGACAGGCTTGACGGAGAACAACCGGCCTGAGCTCATGGCATCATTCTT
GGACGCAGTGGTTGATGACCCGAGAATAGAGATTGCTACACATGATTGGAACTCTATAATACATGCCTTTTGCAAGGTTG
GGAGGTTAGAGGATGCTCGAAGAACATACCGAAGGATGCTATTCCTGTTATATGAACCAAACAATCAGACATACCTCTCA
CTTATCAATGGGTATCTCTCAGCAGAGAAGTACTTTAATGTGCTCATACTATGGACAGAAGTGAGGAGGAAGGGGGCTGA
TTTTAACCACGAGTTGATTGATGCCTTTCTGCATGCTTTGGTCAAGGGTGGATTTTTTGATATGGCAATGCAGGTGATTG
AGAAGGCACAAGAGTTGAAAATATTTGTAGATAAGTGGAGGCACAAACAAGCCTTCATGGAAACCCACAAGAAGCTAAAA
GTGGCGAAGCTGAGAAAGCGCAACTTTAGGAAAATGGAAGCTCTGATCGCGTTCAAGAACTGGGCGGGTCTTAACTCATA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3D_1_TraesCS3D01G319300
AATCACCCAGTTACGTTGCGATGTTTGGTAGCACACAAAGTGTTCCTCCGGTAAACGGGAGTTGCATAATCTCATAGTCA
TAGGAACATGTATAAGTCATGAAGAAAGCAATAGCAATACACTAAACGATCGAGTGCTAAGCTAACGGAATGGGTCAAGT
CAATCACATCATTCTCCTAATGATGTGATCCCGTTAATCAAATGACAACTCATGTCTATGGCTAGGAAACATAACCATGT
TTGATCAACGAGCTAGTCAAGTAGGGGCATATTAGTGACACTCTGTTTGTCTATGTATTCACACAAGTATTATGTTTCCG
GTTAATACAATTCTAGCATGAATAATAAACATTTATCATGAAATAAGGAAATAAATAATAACTTTATTATTGCCTCTAGG
GCATATTTCCTTTAGTTTCAACAAATCAGGAGTCAGTCTCCCTCTTAAAAAAGGACACCTGGTCAATTATTTCTACAAAT
GACTATAATTCGTGTGGGCTTGGATGACTAGGGGCAAAGTGTAGCGTACTACCCTTCTAAGATAATTCCGTTTTCCGCCC
GGTGTTATTGTATTTTACTGGTTTTGTTTACGTGCTTACGTGTTTCGAGCGAAAAATCGATGATTCAATGGTTGGACCTG
CGGTTTACTCGGTCATGCGGGGAGAAGGAGAGTCGGACGGATGATTTTCTCAGAGCATGCAAGGAGAAACGATGGGGGAC
GAGTGGTTTTTTCCTCTCGCTAAATCGGGTCCATCCAATTACAATTGAACAGCGCGCGATGCGTTTGGGCTCCATGCTAA
AAACCTGCCGTTCGTCCATTAGATTTTTCCGAAAATAAATTGTCCAACTGAGTGTTCAACACTTTCTTCTTGTAAAACTG
ACTCCAAAAAGAG-TTTTAATGTAAAAATCCCACGGCAATCCCACGCGAGCTGCAAGGCTGCAACTTCGCTGGCTTCCTT
GGCAAACGCTCGAACACCTCAACGGCAAAACCTCTCCGCCGATGCGCGCCCTTCTCTCCGTCCGCCTCCGGCGCCTGCTC
TCTCCGCCCCTAAGCGCGAGGCCCTCCTCTTCCTCCTCCTC------------------------CGGAACCCACGAGAT
CCCCACCGTCTACTCCTTCCTCCAGCCCAACATCTTCGCGCCGCGCCCCAGGCCCCAACCGCCGCCGCCGCCGCCGTCAC
CCCCCGCTCCGGGCCCCGCGCCCAAAACCCTGCCCGTCGCGGACGCCGGCGCGCTCGAAGAAAGCCTGCTCGCCGCCGCC
GCCGAGGGCCGCTCGGACGACGCGTGGCTCGTGTTCAAGTCCCTGGCGGCGGCCTCCCTCTCGCCGTCGCCTCCCGCCGC
GGCGGCCCTCGTATCCCACCTCGTCGCGGACAACCACCGCCTCGGCCTCAAGCGCGCCTTTGCCGCCGCCGTCTTCCTGC
TGGAGAAGAGCCCCCATGCCTCCCCCCTCCCGGAGGCCGCGCTGGAGGCCCTCTTCTCCTCCCTCGCCGCCTCGGGCTCC
GCGGCCCCGGCGCTGGCCCTCGCGCGTGCTCTCCTCGGCTGCGGGCGCCGCCTGCCGGCTTTCTCTGCCTGGGGCCTTCC
GCTGATAGAGCTCACCCGCGCTGACACGGGCTCCTTTGCGGCCTTCTTGAAGGTGTTTGAAGAGGCCTGCAAGCTCATGG
CGGAGGAGAAGTCTCCGTCTGTGGCAGTGGTCATGCGGCCTGATCTCGCTGCCTGCAATGCTGTTCTTGATGGATGCTGC
CGCAGGCTCGGCTCAGTCACGGATGCTGAGAAGGTCTTGGAGATTATGCCAGCTGTCGGGGTGTCGCCAGACGTGGAGAG
CTTTGGACATCTTGCCTTCTTGTATGCGTGGAGATCTGTTCCAAGCCGGGTCGATGAGCTCGATAAGTTGCTGGAAGCTC
TGGGCTTCAGCAAGAAAGGATTTTTCAAGAATTTAGTGAGTGGGTATTTGAAGTCTTGCAGCTTTGAGTCTGTTTCGTCG
ATCATACTTCGTGCGGTGGAGGAGAGAAGAGTTGGGGATGGCAATCCATTTGATGATGGGTGCTATACCGAGGTCGCACA
ATGCTTTGTTGACAATGCAAGGATCAGGGAATTGGCTCAGTTGATCTTCCAAGCACAAGAGATTGAGTCGGCACATCAAT
TGCTGGTAGTTGATGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTCGGACTTGGTCTATTGAACAAGGCTCATAAC
ATACTTGATGAAATGACTGCTCAAGGAGCTTCTGTGGGACTAGCTATATACACCCCAATCTTGAAAGCATATTGCAAGGA
GCAGAAGACTGCAGAGGCTGCACAGCTTGTGGCGGAGATTAGCGCAGCAGGGCTACAGCTTGATGCTGGCAGTTATGATG
CTCTTATTGATGCTTCCATGACAGCCCATGATTTCCAGTCTGCATTTGCACTTTTCAAAGATATGAGGGAGGCGAGGCTA
CCAGATCTTAGGACAAGCTATCTTACTATAATGACAGGCTTGACGGAGAACAACCGGCCTGAGCTCATGGCATCATTCTT
GGACGCAGTGGTTGATGACCCGAGAATAGAGATTGCTACACATGATTGGAACTCTATAATACATGCCTTTTGCAAGGTTG
GGAGGTTAGAGGATGCTCGAAGAACATACCGAAGGATGCTATTCCTGTTATATGAACCAAACAATCAGACATACCTCTCA
CTTATCAATGGGTATCTCTCAGCAGAGAAGTACTTTAATGTGCTCATACTATGGACAGAAGTGAGGAGGAAGGGGGCTGA
TTTTAACCACGAGTTGATTGATGCCTTTCTGCATGCTTTGGTCAAGGGTGGATTTTTTGATATGGCAATGCAGGTGATTG
AGAAGGCACAAGAGTTGAAAATATTTGTAGATAAGTGGAGGCACAAACAAGCCTTCATGGAAACCCACAAGAAGCTAAAA
GTGGCGAAGCTGAGAAAGCGCAACTTTAGGAAAATGGAAGCTCTGATCGCGTTCAAGAACTGGGCGGGTCTTAACTCATA
ACATTTTAACCTATCATGCGATTCCTCGCTAAATTTGTGGCAGTTCAAAGTGGCGAAGCTGAGAAAGCGCAACTTTAGGA
AAATGGAAGCTCTGA-TCATGTTAAAGAACTGAGCTGGTCTTAATTCATAAGATTGCAACCTATCATGTGATTCCTCACT
GAATTTGATCACACATGCTTGTGTGAGATGACATTCCAAATAATTTTGAAGCTGTAGCAAGCAGCAAACCTTCAGAGATG
AACAAGTGTAGGCGATATGCCAATATGTGATCACTGATAAGTTTGCAACAAGGTTAGGGAAGCTGGTGCATTTTTGTCCT
ATTATTCTGTTTCTAGGTACAGATATTTTACTTTACTGGCTAACTTGACTTTGTACTACTTCTTTAACTAGCCTGTTAAC
CTCCAAATCCCATGTAAAA-TTCTTAAGTTACTGAA----TAACAAGTTTCTCCTGAAATGCTTCTCATCGAATGCA-TT
ACTGCTGCGGATATAAAACTATGATATTTTCTGAAAAGTTTATGTTCGTTCGGTCCGC-----------TGAAAAGTTTT
CACTCCTGCTTACTGTTACATGGAAGCGAGCTTTGTTATTTCAAGTCTGTTATTGAGCCTCCTGCCTAAAATAGTTATAT
AAAGTATGGACTGTGGTGCAATTGAGAACTGGGGTCTCCCTTAGTGCGGAAAACGGGAAAGGTGAAGGCAGGAATAACTA
CCTGAAATCAGAATTA----------------------------------------------------------------
--------------------------------------------------------------------------------
---GTTAAACAACCTGATACTAAAATGGTGATTATTCAAACTTGAAGTTGCCAGAGTTGACAAAACACCACAATATTAAA
ATTTGAGTTTATTCTAAAACTGAAATGTGAAGCATATACGGGTCAGCAGTAGAACTTGTGAGATTAGGATTTCTCTATAG
TACATCTAGCAGGGGAGCTGTATGCCAACTTTGTGTAGTTAAAGGTTCTCAAAACCCTAAAACAGTATCATGCAATGCCA
AATCAACAGGAAAAGTGGGGTTTAAAACCAACACCCATCAAATAAA
>chr3A_824
TTTTTCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AAAACAAATTGTCAGACTGATGTCCAACG-----CTTGTTGCAAAACTG
ACTCCAAAAGAGTTTTTTCATGTAAAAATCCCACGGCAATCC-------GCTGCAAGGCTGCAACTTCGCTGGCTTCCTT
GGCAAACGCTCGAACACCTCTACGGCAAATCCTCTCCGCCGATGCGCGCCCTCCTCTCCGTCCGCCTCCGGCGCCTGCTC
TCTCTGCCCCTAAGAGCGAGGCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCGGCGGAACCCACGAGAT
CCCCACCCTCTATTCCTTCCTCCAGCCTAACATCTTCGCGCCGCGCCCCAGGCCCCAACCCCCGCCGCCACAACCACATC
CCTCA---CCGGACCCCGCGCCCAAAGCCCTGCCCGTCGCGGACGCCGTCGCGCTCGAGGAAAGCCTGCTCGCCGCCGTC
GCCGAGGGCCGCTCGGATGACGCGTGGCTCGCGTTCAAGTCCCTGGCGGCGGCCTCCCTCTCGCCGTCGCCTCCCGCCGC
GGCGGCCCTCGTATCCCACCTCGTCGCGGACAACCACCGCCTTGGCCTCAAGCGCGCCTTTGCCGCCGCCGTCTTCCTGC
TGGAGAAGAGCCCCCATGCCTCCCCCCTCCTGGAGGCCGCGCTCGGGGCTCTCTTCTCCTCCCTCGCCGCGTCGGGCTCC
GCCGCCCCGGCGCTGGCCCTCGCGCGTGCTCTCCTCGGCTGCGGGCGCCGCCTGCCGGCTTTCTCCGCCTGGGGCCTTCC
GCTGATAGACCTCACCCGCGCTGACACAGCCTCCTTTGCGGCCTTCTTGAAGGTGTTTGAAGAAGCCTGCAAGCTCATGG
CGGAGGAGAAGTCTCCGGCTGTGGTAGCGGTCATGCGGCCTGATCTCGCGGCCTGCAATGCTGTTCTTGATGGATGCTGC
CGCAGGCTCGGCTCAGTCGCAGATGCTGAGAAGGTCTTGGAGATTATGCCAGCTGTTGGGGTGTCGCCAGATGTGGAGAG
CTTTGGACATCTTGCATTCTTGTATGCGTGGAGAGCTGTTCCAAGCCGGGTCGATGAGCTCGATAAGTTGCTGGAAGCTC
TGGGCTTCAGCAAGAAAGGGTTTTTCAAGAATTTAGTGAGTGGGTATTTGAAGTCTTGCAGCTTTGAGTCAGTTTCCTCA
ATCATACTTCGTGCGGTGGAGGAGAGAAGAGTTGGGGATGGCAATCCATTTGATGATGAGTGCTACACTGAGGTCGCACA
ATGCTTTGTTGATAATGGAAGGATCAGGGAACTGGCTCAGTTGATCTTCCAAGCACAAGAGATTGAGTTGACACATCAAT
TGCCAGTAGTTGATGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTCGGACTTGGTCTATTGAACAAGGCTCATAAC
ATACTTGACGAAATGACTGCCCAAGGAGCCTCTGTGGGGCTAGCTATATACTCCCCAATCTTGAAAGCATATTGCAAGGA
GCAGAAGACTGCAGAGGCTGCACAGCTCGTGGCGGAGATTAGCGCAGCAGGGCTACAGCTTGATGCTGGCAGTTATGATG
CTCTTATTGATGCTTCCATGACAGCCCATGATTTCCAGTCTGCGTTTGCACTTTTCAAAGATATGAGGGAGGCGAGGCTA
CCAGATCTTAGGACAAGCTATCTTACTATAATGACAGGCTTGACGGAGAACAACCGGCCTGAGCTCATGGCATCATTCTT
GGATGCAGTGGTTGATGACCCGAGAATAGAGATTGCTACACATGATTGGAACTCTATAATACATGCCTTTTGCAAGGTTG
GGAGGTTAGAGGATGCTCGAAGAACATACCGAAGGATGCTATTCCTGTTATATGAACCAAACAATCAGACATACCTCTCA
CTTATCAATGGGTATCTCTCAGCAGAGAAGTACTTTAATGTGCTCATACTATGGACAGAAGTGAGGAGGAAGGGGGCTGA
TTTTAACCACGAGTTGATTGATGCCTTTCTGCATGCTTTGGTCAAGGGTGGATTTTTTGATATGGCAATGCAGGTGATTG
AGAAGGCACAAGAGTTGAAAATATTTGTAGATAAGTGGAGGCACAAACAAGCCTTCATGGAAACCCACAAGAAGCTAAAA
GTGGCGAAGCTGAGAAAACGCAACTTTAGGAAAATGGAAGCTCTGATCGCATTCAAGAACTGGGCGGGTCTTAACTCATA
ACATTTTAACCTATCATGCGATTCCTCGCTGAATTTGTGGCAGTTCAAAGTGGCGAAGCTGAGAAAGTGCAACTTTAGGA
AAATGGAAGCTCTGA-TCATGTTAAAGAACTGAGCTGGTCTTATTTCATAAGATTGCAACCTATCATGTGATTCCTCACT
GAATTTGATCACACATGCTTGTGTGAGATGACATTCCAAATAATTTTGAAGCTGTAGCAAGCAGCAAACCTTCAGAGATG
AACAAGTGTAGGCGATATGCCAATATGTGATCATTGATATGTTTGCAACAAGGTTAG-GAAGCTGGTGCATTTTTGTCCT
CCTATTTTGTTTCTAGGTATAGATATTTTACTTTACTGGCTAACTTGACTTTGTACTACTTCGTTAACTAGCCTGTTAAC
CTCCAAATCCCATGTAAAA-TTCTTAAGTTAGTGAA----TAACAAGTTTCTCCTGAAATGCTTCTCATTGAATGCATTT
ACTGCTGCGGTTATAAAACTATGATATTTTCTGAAAAGTTTATGTTCGTTCGGTCCGTTAAGCTACCCTTGTAATGTTTT
CACTCCTGCTTACTGTTACATGGAAGCGAGCTTTGTTATTTCAAGTCTGTTATTGAGCC-CCTGCCTAAAGTAGTTATAT
AAAGTATGGACTGTAGTGCAATTGAGAACTGGGGTCTCCCTTAGTGCGGAAAACGGGAAAAGTGAAGGCAGGAATAACTA
CCTGAAATCAGAATTGGTTAAACATCCTGATATTAAAATGCTGATTATTCAAACTTGAAGTTGCCAGAGTTGACAAAACA
CCACAATATTAAGAACTGGGGTCTCCCTTAGTGCGGAAAACGGGAAAAGTGAAGGCAGGAATAACTACCTGAAATCAGAA
TTGGTTAAACATCCTGATATTAAAATGCTGATTATTCAAACTTGAAGTTGCCAGAGTTGACAAAACACCACAATATTAAA
ATTTGAGTTTATTCTAAAACTGAAATGTGAAGCATATACGGGTCACCAGTAGAACTTGTGAGATTGGGATTTCTCTATAG
TACATCTAGCAGGGGAGCTGTATGCCAACTTTGTGTAGTTAAAGGTTCTCAAAACCCTAAAACAGTATCGTGCAATGCCA
AATCAACAGGAAAAGTGGGGTTTAAAAACAGCACCCATCAAATAAA
>chr3B_937
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------GCTGCAACTTCGCTGGCTTCCTT
GGCAAACGCTCGAACACCTTAACGGCAAAGCCTCTCCGCCGATGCGCGCCCTCCTCTGCGTCCGCCTCCGGCGCCTGCTC
TATCTGCCCCTAAGCGGGAGGCCCTTCTCCTCCTCCTCCTCCTCCGA------------------CGGAACCCACGAGAT
CCCCACCGTATACTCCTTCCTCCAGCCTAACATCTTCGCGCCGCGCGCCAGGCCCCAACCCCCGCCGCCGCCGCCGTCAC
CTCCCGCTCCGGGCCCCGCGCCCGAAGCCCTGCCCGTCGCGGACGCCGTCGCGCTCGAAGAAAGCCTGCTCGCCGCCGCC
GCCGAGGACCGCTCGGATGACGCGTGGCTCGCGTTCAAGTCCCTGGCGGCGGCCTCCCTCTCGCCGTCGCCTCCCGCCGC
GGCGGCCCTCGTATCCCACCTCGTCGCGGACAACCACCGCCTCGGCCTCAAGCGCGCCTTTGCCGCCGCCGTCTTCCTGC
TGGAGAAGAGCCCCCATGCCTCTCCCCTCCCGGAGGCCGCGCTCGAGGCCCTCTTCTCCTCCCTCGCCGCGTCGGGCTCC
GCGGCCCCGGCGCTGGCCCTCGCGCGTGCTCTCCTCGGCTGCGGGCGCCGCCTGCCGGCTTTCTCCGCCTGGGGCCTTCC
GCTGATAGAGCTCACCCGCGCTGACACGGGCTCGTTTGCGGCCTTCTTGAAGGTGTTTGAAGAAGCCTGCAAGCTCATGG
CGGAGGAGAAGTCTCCGTCTGTGGTAGCGGTCATGCGGCCTGATCTCGCGGCCTGCAATGCTGTTCTTGATGGATGCTGC
CGCAGGCTCGGCTCAGTCACAGATGCTGAGAAGGTCTTGGAGATTATGTCAGCTGTTGGGGTGTCACCAGACGTGGAGAG
CTTTGGACATCTTGCCTTCTTGTATGCGTGGAGGGCTGTTCCAAGCCGGGTCGATGAGCTCGATAAGTTGCTGGAAGCTC
TGGGCTTCAGCAAGAAAGGGTTTTTCAAGAATTTAGTGAGTGGGTATTTGAAGTCTTGCAGCTTTGAGTCTGTTTCGTCG
ATCATACTTCGTGTCGTGGAGGAGAGAAGAGTTGAGGATGGCAATCCATTTGATGATGAGTGCTATACCGAGGTTGCACA
ATGCTTTGTTGATAATGGGAGGATCAGGGAATTGGCTCAGTTGATCTTCCAAGCACAAGAGATTGAGTCGACACATAAAT
TGCTGGCAGCTGATGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTCGGACTTGGTCTATTGAACAAGGCTCATAGC
ATACTTGATGAAATGACTGCCCAAGGAGCCTCTGTGGGGCTAGGTATATACACCCCAATCTTGAAAGCATATTGCAAGGA
GCAGAAGACTGCAGAGGCTGCACAGCTTGTGGCGGAGATTAGCGCAGCAGGACTACAACTTGATGCCGGCAGTTATGATG
CTCTTATTGATGCTTCTATGACAGCCCATGATTTCCAGTCTGCGTTTGCACTTTTCAAAGATATGAGGGAGGCGAGGCTA
CCAGATCTTAGGACAAGTTATCTTACTATAATGACAGGCTTGACGGAGAACAACCGGCCTGAGCTCATGGCATCATTCTT
GGACGCCGTGGTTGATGACCCGAGAATAGAGATTGCTACACATGATTGGAACTCTATAATACATGCCTTTTGCAAGGTTG
GGAGGTTAGAGGATGCTCGAAGAACATACCGAAGGATGCTATTCCTGTTATATGAACCAAACAATCAGACATACCTCTCA
CTTATCAATGGGTATCTCTCAGCAGAGAAGTACTTTAATGTGCTCATACTATGGACAGAAGTGAGGAGGAAGGGGGCTGA
TTTTAACCACGAGTTGATTGATGCCTTTCTGCATGCTTTGGTCAAGGGTGGATTTTTTGATATGGCAATGCAGGTGATTG
AGAAGGCACAAGAGTTGAAAATATTTGTAGATAAGTGGAGGCACAAACAAGCCTTCATGGAAACCCACAAGAAGCTAAAA
GTGGCGAAGCTGAGAAAGCGCAACTTTAGGAAAATGGAAGCTCTCATCGCGTTCAAGAACTGGGCGGGTCTTAACTCATA
ACATTGCAACCTATCATGCGATTCCTCGCTGAATTTGTGGCAGTTCAAAGTGGCGAAGCTGAGAAAGCGCAACTTTAGGA
AAATGGAAGCTCTGATTCATGTTAAAGAACTGAGCTGGTCTTAGTTCATAAGATTGCAACCTATCATGTGATTCCTCACT
GAATTTGATCACACATGCTTGTGTGAGATGACA-----AATAATTTTGAAGCTGTAGCAAGCAGCAAACCTTCAGAGATG
AACAAGTGTAGGCGATATGCCAATATGTGATCATTGATAAGTTTACAACAAGGTTAGGGAAGCTGGTGCATTTTTGTGCT
CTTATTTTGTTTCTAGGTATAGATATTTTACTTTACCGGCTAACTTGACTTTGTACTACTTCTTTAACTAGCCTGTTAAC
CTCCAAATCCCATGTAAAAATTCTTAAGTTAGTGGATACGTAACAAGTTTTTCCTGAAATGCTTCTCATCGAATGCA-TT
ACTGCTGCGGTTATAAAACTATGATATTTTCTGAAAAGTTTATGTTTGTTCGGTCCGTTGAGCTACCCTTGTAATGTTTT
CACTCCCGCTTACTGTTACATGGAAGCGAGCTTTGTTATTTCAAGTCTGTTATTGAACCTCCTGCCTAAAATAGTTATAT
AAAGTATGGACTGTAGTGCAATTGAGAACTGGGGTCTCCCTTAGTGCGGAAAACGGGAAAAGTGAAGGCAGGAATTACTA
CCTGAAATCAGAATTGGTTA------------------------------------------------------------
--------------------------------------------------------------------------------
-------AACAACCAGATATTAAAATGGTGATTATTCAAACTTGAAGTTGCCAGAGTTGACAAAACACCACAATATTAGA
ATTTGAGTTTATTCTAAAACTGAAATGTGAAGCATATACGGGTCAGCAGTAGAACTTGTGAGATTGGGATTTCTCTATAG
TACATCTAGCAGGGGAGCTGCATGCCAACTTTGTGTAGTTAAAGGTTCTCAAAACCCTAAAACAGTATCGTGCAATGCCA
AATCAACAGGAAAAGTTGGGTTTAAAAACAGCACCCATCAAATAAA
>SNPs
SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------SS-----SSSSSS-SSSSSSS---S---S-------
---------SSSS-----S-----------------------SSSSSSS-------------------------------
-----------------------------S----------------------S---------------------------
----S------------------------S--------------------------------------------------
---------------------------S--------------------------------S-------------------
--------------------------S---------------------S-------------------------------
-----------------S-------------S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------------------S---------
-----------------------------------------------------------------S--------------
---------------------------------------------------------------S----------------
------------------------S--S---------------------S------------------------------
--------------------S-----------------------------------S-----------------------
----------------------------------S---------------------------------------------
-------------------S------------------------------------------------------------
----------------------------------------------------------S---------------------
------------S----S----------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------S--------S--------S-----------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
S-----S------------S------------------------------------------------------------
-------------------------------S------------------------------------------------
----------S----------------------------------------------S-------------S--S-----
--------------------------------------------------------------------------------
--------------S---------------------------------------------S-------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------------------------------------------------------------S--------------
---------------------------------------------------------------------S----------
---------------------------S--S---------------
>forward_752
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCTCTCGCTAAATCGGGTCC------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>reverse_1730
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------TGCCTGCAATGCTGTTCTTG-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------
>forward_1148
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TCTACTCCTTCCTCCAGCCC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>reverse_2261
--------------------------------------------------------------------------------
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--------------------TCAAGGAGCTTCTGTGGGAC----------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>forward_1705
--------------------------------------------------------------------------------
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-----GAGAAGTCTCCGTCTGTGGC-------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>reverse_3695
--------------------------------------------------------------------------------
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--------------GGTGCAATTGAGAACTGGGG----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------
