>input_sequence_39314
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----------------------------------------ATGAGCTGGTGTTGCCTCCCAAGAGCCAAGAAACAGCAAC
AGG------AGAAGAATCTCTACTTCCATAGGCAACAGGAGAATCTCAACTCTCAAACCAGCATAAGCGGTAAGGCTTCG
TTTTGCGTTGCAAAATTTACCCAACAGCCTGCAAT--TTTGCTGTTATGACC-TGTGATGCCTTAATGG-----AGTATT
CTGCCATCACTTCTTGT----TCCCACCACTTATCCCAATGAATATAT--------------------------AATTAC
AGACATGCCGAAACT-AAAAGTTCATCTCTGTCTGCACCTTACCTACCATCCTGAACTAAATTTTGGACAAAAGTTAACT
AAACATCCTTC-----------CAAATGTTG-----CTGCTTTCAGGCATTTCTGCTGAGAAGAACATAAGGCTCTTCTC
CTATGCTCAGTTGAAATTAGCAACCAACAACTTCGACCGCAACAACAAAGTCGGCCGAGGTGGTTTCGGGACAGTATATA
AGGTGACATTTTCATCTCCCTTTGTGAGGGAATTGTATGGCTCAAACTTGTTTGCTCTAAGCTGCCAATGCTTTGCATGG
CTGATCAGCGTATCTGTG-TTCAGGGAACCCTACCAAACAAGCAAGATGTCGCGGTCAAAGTTCTCTCTGCCGAATCCAG
GCAGGGCATCAGAGAATTCTTGACAGAAATCGACGTTATCAGCAACGTGAAGCACCCTAACCTTGTTGAATTGATCGGCT
GTTGCGTCGAAGAAGAAAATCGCATTTTGGTGTATGAGTACCTGGAGAACAGCAGCCTCGACCGTGCACTCTTGGGTATG
AAAAAATGAACCTATTCTCCTGTCACTATATTAACATGGTGATTTCCTTTGTGGC--TTAACAGTTTACCTTGTGGTTCC
ACAGCTTCTAACAGTGATCCGGCCAATTTTACTTGGAGCATAAGGTCTTCCATATGCATCGGTGTTGCGAGGGGTCTTGC
ATACCTGCATGAAGAGATCCCATCACCGATCGTGCACAGAGATATCAAGGCTAGCAATATACTCATCGACAAGAATTACG
TACCCAAGATCGGGGACTTCGGTCTGGCCAAACTATTTCCGGATAATATCACCCACATCAGTACCCGAGTAGCTGGAACG
ACGTGAGTACATTGCGGTTTCCAGCTCATTTAACTGGAAAGTACAGTAGTTTCTAAATTACTACTGCATTTCCTTCAATT
ATTATTTCTGGTTTCATCTATCCCATTGTCTACTTACTCCCTGTTTATTCCCCTGTTACCTTGAATTAACTCTGCTTACT
GGGTTGCATGCAGAGGTTACCTTGCACCTGAATATGCATGGCATGGTCAATTGACTAAGAAAGCAGACATATACAGCTTC
GGGGTCCTCGTAATCGAGATCGTCAGCGGCAAGAGTGGCTCGAGGAGCCTGCTGGCTGATGACAAGTTTCTTCTAGAGAA
GGTCAGTTCTTGCTTACTATCATCTGCTTCTTAT----------------------------------------------
-----------------------------------------------------------------------------ACC
TGCTTATCTGCATTCCACAAATGAAGACATGTAC---TGTAATACAGCTTCAGAA-ATCAGATCAAC-------------
----------AAGACTGTCCAGTAAAACTAGATTTACTACAGTTATGTGA--TGAACTTAGCTTGCAGCATATACCTGAC
TTTATGCCAGTATTAAAAGATTCACAAGCATGAAATGATTTATATCAGCCTCAGTCTAAACTCTTAAACCTGAA----CA
TTCACCGCAGACTTGGGAGCTGTATGAAGCAGGGAACCTCAAGGAACTGGTTGATCCAGATCTTGGGGATTACCCTGATG
AGGAGGCCATCAGGTTCATCAAGGTGGCCCTCTTCTGCACCCAGGCGGCGGCGGCGCGCCGCCCTTCGATGCTACAGGTG
GTGAAGATGTTGTCCAAGCCAATCCGGATCAACGATAGAGAGCTGACAGCGCCGGGGTACATCAGTGAGTACAATAGCGG
TGTCTCCAAGGCAACGGCCTCCAGCGACTCGAGGTTCAAGAACTCGACCACAGCGGATGATTCCGACATGTTCAGCACCG
TCGTGCCCCAGACGGTGACCGACGTCAGCCCTAGGTGA------------------------------------------
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-
>chr2A_1_TraesCS2A01G589900
ATTGTTTCCAACCTG----CGGGCGGGCTACAGGAGAAATCTACATAG---AGTAACTCCAGCCCCCAACCACCTCCCTC
CCTCGCTCCCTCGCTTCTTCC----------------CCCGCCCCGGCCCCTACCTATCCATTTCCTCTCCCTGTGGACT
GTGGTGTGCCGCCGCCGCCGCTCACTCGCTCGCCGCCGGTCTGACTCGACTCACCCGGGAAGA------------ACACA
CCAAGCAAGCGCGCA-------CGGCCGGCTGCTCTCTTTCTCCTGCCTGCCAGTGCCAGGTACCCGCCGGCCGTTGTCG
TCTACAGTCGCCTACCTTGTACAACTAATTCTTTATCAGCAACTCCTTACTTTGTAGTTACTACTCCTAGTAATTCTTTA
-----------------------TTTGCCAACTTCTCAAGTGCTCTAGTATACATGTGTCCTCGACAAGCCGCCACCCG-
--------ATCCATTTCTGCGCCGCGC-------CTTCTCATGCCGCACCTTAGCTAGCTAGCCGCTAATACTTACTTAC
TTTTTTTGTGGCACTTCTTCCGATCTG--AGATCCAGACTCACCTGCAACCTGGAGCAAAGCTTCTTGCGCTTTTGTGTC
TTTTCTCACCCGGCAGGTGCTTCCACGGTAGATTTGAGGCTAATTGCA-GTTTTGTGTTTGTTTTATCCGTGAGGT----
--------GTCGATTTGAGGTTCATTCTCATGCCCATCCCTCCCCTCCTGATTTGAG-----------------------
--------------------------------------------------------------------------------
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------------GCTGTCATGAATTTAAGCCCAACT--------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGGCCTCTCC
TGAAC----TTTCACTTCTTATAAAATCTCAGTCCA--------------------------------------------
-----ATTTGGCCTCTGTTGCACTTTTCAGTTTTATAATATTTCTTTATTTTTAGGCAAGTGTTTTTTTTTAAGAAATTC
GTTCCAACTTGGCCTCGCCTGCACTTCCAGTTTTCATAAAATTGTCATACTTGAGCTGTGTGACAAG-------------
---------GTTTTGTCCCCTGAAATATGTTCATGCAGAGTAAGAGCGCCGCGCCGCCTTTGCTGAATGTTCCTCGGAGT
TTGACAAGCCTGCCTGCCGCCATAGCAACTGAGTATAATAATGAGCTGGTGTTGCCTCCCAAGAGCCAAGAAACAGCAAC
AGG------AGAAGAATCTCTACTTCCATAGGCAACAGGAGAATCTCAACTCTCAAACCAGCATAAGCGGTAAGGCTTCG
TTTTGCGTTGCAAAATTTACCCAACAGCCTGCAAT--TTTGCTGTTATGACC-TGTGATGCCTTAATGG-----AGTATT
CTGCCATCACTTCTTGT----TCCCACCACTTATCCCAATGAATATAT--------------------------AATTAC
AGACATGCCGAAACT-AAAAGTTCATCTCTGTCTGCACCTTACCTACCATCCTGAACTAAATTTTGGACAAAAGTTAACT
AAACATCCTTC-----------CAAATGTTG-----CTGCTTTCAGGCATTTCTGCTGAGAAGAACATAAGGCTCTTCTC
CTATGCTCAGTTGAAATTAGCAACCAACAACTTCGACCGCAACAACAAAGTCGGCCGAGGTGGTTTCGGGACAGTATATA
AGGTGACATTTTCATCTCCCTTTGTGAGGGAATTGTATGGCTCAAACTTGTTTGCTCTAAGCTGCCAATGCTTTGCATGG
CTGATCAGCGTATCTGTG-TTCAGGGAACCCTACCAAACAAGCAAGATGTCGCGGTCAAAGTTCTCTCTGCCGAATCCAG
GCAGGGCATCAGAGAATTCTTGACAGAAATCGACGTTATCAGCAACGTGAAGCACCCTAACCTTGTTGAATTGATCGGCT
GTTGCGTCGAAGAAGAAAATCGCATTTTGGTGTATGAGTACCTGGAGAACAGCAGCCTCGACCGTGCACTCTTGGGTATG
AAAAAATGAACCTATTCTCCTGTCACTATATTAACATGGTGATTTCCTTTGTGGC--TTAACAGTTTACCTTGTGGTTCC
ACAGCTTCTAACAGTGATCCGGCCAATTTTACTTGGAGCATAAGGTCTTCCATATGCATCGGTGTTGCGAGGGGTCTTGC
ATACCTGCATGAAGAGATCCCATCACCGATCGTGCACAGAGATATCAAGGCTAGCAATATACTCATCGACAAGAATTACG
TACCCAAGATCGGGGACTTCGGTCTGGCCAAACTATTTCCGGATAATATCACCCACATCAGTACCCGAGTAGCTGGAACG
ACGTGAGTACATTGCGGTTTCCAGCTCATTTAACTGGAAAGTACAGTAGTTTCTAAATTACTACTGCATTTCCTTCAATT
ATTATTTCTGGTTTCATCTATCCCATTGTCTACTTACTCCCTGTTTATTCCCCTGTTACCTTGAATTAACTCTGCTTACT
GGGTTGCATGCAGAGGTTACCTTGCACCTGAATATGCATGGCATGGTCAATTGACTAAGAAAGCAGACATATACAGCTTC
GGGGTCCTCGTAATCGAGATCGTCAGCGGCAAGAGTGGCTCGAGGAGCCTGCTGGCTGATGACAAGTTTCTTCTAGAGAA
GGTCAGTTCTTGCTTACTATCATCTGCTTCTTAT----------------------------------------------
-----------------------------------------------------------------------------ACC
TGCTTATCTGCATTCCACAAATGAAGACATGTAC---TGTAATACAGCTTCAGAA-ATCAGATCAAC-------------
----------AAGACTGTCCAGTAAAACTAGATTTACTACAGTTATGTGA--TGAACTTAGCTTGCAGCATATACCTGAC
TTTATGCCAGTATTAAAAGATTCACAAGCATGAAATGATTTATATCAGCCTCAGTCTAAACTCTTAAACCTGAA----CA
TTCACCGCAGACTTGGGAGCTGTATGAAGCAGGGAACCTCAAGGAACTGGTTGATCCAGATCTTGGGGATTACCCTGATG
AGGAGGCCATCAGGTTCATCAAGGTGGCCCTCTTCTGCACCCAGGCGGCGGCGGCGCGCCGCCCTTCGATGCTACAGGTG
GTGAAGATGTTGTCCAAGCCAATCCGGATCAACGATAGAGAGCTGACAGCGCCGGGGTACATCAGTGAGTACAATAGCGG
TGTCTCCAAGGCAACGGCCTCCAGCGACTCGAGGTTCAAGAACTCGACCACAGCGGATGATTCCGACATGTTCAGCACCG
TCGTGCCCCAGACGGTGACCGACGTCAGCCCTAGGTGAAACAAGGCACCAA-GGAGGGTGGCCTGCTTTGTTCCTTTATT
TCCATTT--TGTAGGGTTACAGTACCATAGAGGGCA-------------------CAGTGTGTCTGCTCATGAGTTTTGT
CTTGGTGAGGCAAGT--T-AGAAGTTGTAAATGA-----TAGATTAGTGATTCATGCCAGGGCAATGTAAAATTGCTGGA
AGTATGACGGTAG-------------------------------------AATCAGGCATGTCGTCACATTCAGTTAACT
TCTCAGCTTTTGGTTTAAGACCATAATGTATTTATCC--------AGTCTGGGACCAGGAGAAAACAGTAAAGAGTGCAG
TTGTTTGCTGTGATACTAAGCTGAATGTTCAGAACTGATCGATACATAGCCATCCTGA-TGCGGATCTCTACAAAAAAGA
CCGCTACAGGGTAGGCGACACTCCGGGTATTTTTGAAAATAAAAGTTTCCTTCTAAGCATAGTCAAGGTTCTGGTG----
TTTCTGTAAAAAGAAAAGAAGCTACTCTGATGCTGCA---GTCTGCTCCTTCTCCGTCTCTGCGGCGGGGCCGTTGGCAG
GTGCTTCTTTGCTCTCCACGGGCTGCTTGGCTCCATTTGCTGGTGCTGGTGCGCCGTCTTTCGCACCTTCCTTGGCGCCT
TCCTTGGCAGCAGGGGCTGGTGGAGGTTGCATCATGTGCGGTGGAGGAGCATGCTTCAGCTTCACTAGGACCTGGCGCAT
ACGGGAGAGGTCGGTGGGCTTGCCGGGCTTGGGGCCCTGAATGACTGCGATGGATGGCTTCTTGTCCTTGTCTTTCTTGC
CCCGCTTCTCGATGGTAGCGATCTCATGTGGGATGAGCTCCGAGATTGATTTCCAGTACTGCTTGTCTGCGCTAGCATGG
AATTTCTCCTGGCTTTCTACAAAAATCTGCAGAACACCACAAGTCCACAGTGATCAATGCAGATTTGCTTACAGAATATT
ACATAATTAAGAAATGCCCCCTCACGTACCTTCTCTCTTTCCCTGCTATGGACCTTATTCGTCTCACAGGTCTGTATCCT
C
>chr2B_1
ATTGTTTCCAACCTGCGGGCGGGCGGGCTACAGGAGAAATCTACATAGGAGAGTAACTCAAGCCCCCGACCACCTCCCTC
CCTCGCT--------TCTTGTTCTTCCCCCCTGCCTTCCCGTCCCGGCCCCTACCTATCCATTTCCTCTCCCTGC-----
--GGTGTGCCGCCGCCGCCGCCGC--CGCTCGCCGCCGATCTGACTCGACTCGCCCGGGAAGA------------ACACA
CACGCATACACACACCAA--GCCGGTCGGCTGA------TCTCCTGCCTGCCAGTGCCAGGTACCCGCCGGCCGTTGTCG
CCTACAGTTGCCTACCTTATACT---------------------CCTTACTTTGTT-------------GTAATTGTTTA
-----------------------TTTGCCAACTTCTCAAGTCCTGTA---TGTACGTGTCGTTGACAA-CCTCCATCCAC
TCCCGCGGATCCATCTCCGCACCTTCTCTCTTCTCTGCACATGCCGCAGCTTACCTAGCCGGATAATACTACTTCTTCCG
GACAAGGGAGCTCAGCAGCGGCCTGGAGAAGATCCAGATTGACCTCCAGACTCCAACCAAGTCTC---------------
-------------------------------------------CTGCAGCTTCTGTGTCTTTTTTATTCGTCATGAGGTG
CTTCCACGGTTGATTTGAGGTTAAATTCATGT-CCATCTCTGACCCTGATCTGCTCCANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGAGAG
AGCCACACGCGTGCTGTCATAATTTCCAGTCCAACTTATTGGCCTCTCCTGAACTTTCAGTTTTCATGAAATTTCAGTCC
AACTTATTGGCCTCTCCTGAAATTTCAGTTTTCATGAAATTTCAGTCCAACTTATTGGCCTCTCCTCAACTTTCAGTTTT
CATGAAATTTCAGTCCAACTTATTGGCCTCTCCTGAAATTTCAGTTTTCATGAAATTCAGTCCAACTTATTGGCCTCTCC
TGAAA----TTTCAGTTTTCATGAAATTTCAGTCCAACTTATTGGCCCCTCCTCAACTTTCAGTTTTTTATACAGTTTCA
GTCCAACTTGGCCTCTGTTGCAGTTTCAGTTTCTATGAAATGG-------------------------------------
-----------------------------------------TTAGACTTGACATCTTCTCTTATGTGACAAAGGCTAC--
-CCTGAGCAGTTTTCTCCCTTGCAATATGCTCATGCAGGCCAAGAGCAG-----------------------------GT
TTGACACGGCTGCCACCATAAGCAACTGAGG------ATAATGAGCTGGTGTTGCCTCCCAAGAGCCAAGAAACA---AC
AGCACGACAACAACAATCTCTACTCCCATAGACAACGGGAGAATCTTGTCGCCCAAAGCAGCATAAGCGGTAAGGCTTCT
GCCTGGGTTGCAAAGTTTAACGCCAC--------------------------------------------------TATT
CTACCATCAGTTTTCTTTTTGTTCCACCAATTGACCCAATCAACACTTCAGTTTGACAAAGAAGCAGCTATAACGCTTCC
ACATATGCCAAAACTAAAAAGTTCCTTT----CTGCATTTCACTAATCATCCTTGACAACTTCTTCGACAAAAGATGTGT
CATTCATGGCTTATTTAACGATCAAATGTTG-----CCGCTTTCAGGCATTTCAGCTGAGAAGAACATAAGGCTATTCTC
TTATGCTCAGCTGAAATCAGCAACAGACAACTTCAACCGCAACAACAAAGTCGGACGAGGAGGCTTCGGGACAGTTTATA
AGGTGACACTTTTACCTCTTTCTCCATGCGAATCCAGGGGACGGTCCAAAGCAACCGGCTC-----------TTCCATGT
CTGATCAGTAAAGCTATGTTTCAGGGAACCATACCAAACAAGCAAGATGTCGCGGTCAAAGTTCTCTCTGCTGAATCCAG
GCAGGGCATCAGGGAATTCTTGACAGAAATCGACGTTATTAGCAATGTGAAGCATCCTAACCTTGTGGAGTTGATCGGTT
GTTGCGTCGAAGAAGACAACCGCATTTTGGTGTATGAGTACCTAGAGAACAGCAGCCTTGACCGCGCGCTGTTGGGTATG
AA--------TCTATTCTTATGTCACTATATTAGCATGGTGGTTTTCTTTGCGACTTG-AACATTTTACCTTGTGCTTCC
GCAGGCTCTAACAGCGATCCTGCTAATTTTACATGGAGCGTAAGATCTTCCATATGCATCGGTGTTGCCAGAGGTCTTGC
ATACCTTCATGAAGAGATCCCATCACCGATCGTGCACAGAGATATCAAGGCTAGCAATATACTCATCGACAAGAATTACG
TCCCCAAGATCGGGGACTTCGGTCTGGCCAAACTATTTCCAGACAATATCACCCACATCAGCACCCGAGTAGCCGGAACA
ACGTGAGTACATTGCGATTTGCAGCTCATATAACTGGAAAGTACAGCAGTTTCTAAATTACTACTGCATTTCCTTCAATT
ATTAGTTCTGGCTTCATCTATCCCACTGTCTACTTGTTCCCTGTTTATTCTCCTGTTACCTTGATTTACCCCTGCTTCCT
GGGTTGCATGCAGAGGTTACCTTGCACCTGAATATGCATGGCATGGTCAGTTGACAAAGAAAGCAGATATATACAGCTTC
GGGGTCCTCGCAATCGAGATCGTCAGCGGCAAGAGTGGCTCGAGGAGCCTGCTGGCTGATGATAAGTTTCTTCTAGAGAA
GGTCAGCTCTGGCTTAACATCATGTGCTTCTTAT----------------------------------------------
-----------------------------------------------------------------------------ACC
TGCTTATCTGCATTCCACAAATGAATGAAGACATGTTTGTAATACTGTTCCAGAA-ATCAGAACAAC-------------
----------AACATTGTCTAATAAAACTAGATCTGCTACAGTTATGTGGGGTGAATTTAGTTTGCGGCATCTCCCTGAC
TTTATGCCAGTA--AAAAGATTCGCAAGCATCAAATGATTTATACCAGCCTCTGGTCCTGGTC-TAACTCTGAACATTCA
TTGACAACAGACCTGGGAGCTGTATGAAGCAGGGAGCCTCAAGGAACTGGTTGATCCAGACCTTGGAGATTACCCTGATG
AGGAGGCCATCAGGTTCATCAAGGTGGCCCTCTTCTGCACGCAGGCGGCGGCGGCGCGGCGGCCATCGATGCTGCAGGTG
GTGAAGATGCTGTCCAAGCCCATCCGGATCAACGAGAGCGAGCTGACGGCGCCGGGGTACATCAGTGAGTACAATAGCGG
TGTCTCCAAGGCGACGGCCTCCAGCGACTCGAGGTTCAAGAACTCGACCACGGCGGACGATTCCGACATGTTCAGCACGG
TCGTGCCGCAGACGGTGACCGACGTCAGCCCTAGGTGAAACAAGGCACCAGAGGAGGGTGCTCTGCTTTGTTTCTTTACT
TCCATTATATGTAGGGTTAC--------AGAGGGCA-------------------CAGTGTGTCTGCTCATGAGTTTTGT
CTTCTTAGTGAGGCAAGTTAGAAATTGTAAATGATATACTAGATTAGTGATTCATGCCAGGGCAATGTAAAATTGCTGGA
AATATGATGGTAG-------------------------------------AATCATGCCTGTCATCACATTCAGTTAACT
TCTCAGCTTTTGGTTTAAGACCATAGTGTATTCACCCATCCAAAATGTCTGGAACCAGGAGAAAACATTGAAGAGTGCAG
TTGTTTGCTGTGATACTAAGCTGAATGTTCAGAGCTGATCGATACAAAGCCATCCCGA-CGCGCATCTCTACAAAAAAGA
TCGCTACAGGACTGGCGACACTCCGGGTATTGAAAACATGAGAAGTTTCAGTCTAAGCATAGTCATGGTTCTGGTGTTTC
TTTCTGTAAAAAGAAAAGAAGCTACTCTGATGCTGCTGCGGGCTGCTCCTTCTCCGTCTCTGCGGCGGGGCCGTTGGCGG
GTGCTTCTTTGCTCTCTGCGGGCTGCTTGGCTCCGTTTGCTGGTGCTGGCGCGCCGTCTTTTGCACCTTCCTTGGCGCCT
TCCTTGGCAGCTGGGGCTGGTGGAGGTTGCATCATGTGCGGCGGCGGAGCATGCTTGAGCTTCACTAGGACCTGGCGCAT
CCGGGAGAGGTCGGTGGGCTTGCCGGGCTTGGGGCCCTGAATGACTGCGATGGATGGCTTCTTGTCCTTGTCTTTCTTGC
CCCGCTTCTCGATGGTAGCGATTTCATGTGGGATGAGCTCCGAGATTGATTTCCAGTACTGCTTGTCTGCGCTAGCATGG
AATTTCTCCTGGCTTTCTACGAAAATCTGCAGAACACCACAAGTCCACAGTGATCAATGCATGTTTGCTTACAGAATATT
ACTTCATTAAGAAATGCCCCCTCACGTACCTTCTCTCTTTCCCTGCTATGGACCTTATTCGTCTCACAGGTCTGTATCCT
C
>chr2D_1
ATTGTTTCCAACCTG--------CGGGCTACAGGAGAAATCTACATAACTCAAG---------CCCCAACCACCTCCCTC
CCTCGCT--------TCTTCC----------------CCCGTCCCGGCCCCTACCTATCCATTTCCTCTCCCTG------
-TGGTTTGCCGGCGCCGCTCG---CTCGCTCGCCGCCGATCTCACTCTACTCACCTGGGAAGAGAACACACACACACACA
CCAGGCAAGCGCCGCCCCCGGCCGGCCGGCTGCTCTCTTTCTCCTGCCTGCCAGGTAAA------CGCCGACCGTTGTCG
TCTACAGTTGCCTACCTTGTACTACTAATTCTTTATTAGCCACTCCTTACTTTGGAGTTGGAGGATTCGCTCCATACTTT
TGGAGTAGTATTTGTTTATTTATTTTGCCAACTTCTCAAGTGCTGTA---TATATGTGTCGTTGACAAGCCTCCATCCGC
TTCCGCGGATCCATTTCTGCACCTTCTCTCTTCTCCGCTCGTGCCGCAGCTTACCTAGCT----GCTAATACTTGCT---
-------------------CCGATTTG--AGATCCAGACTGAACTGCAACCGGGAGCAAAGTTTC---------------
-------------------------------------------TTGCA-CTTTTGTGTTTGTTTTATCCGTGAGGTCGGT
--------GTTGGTTTGAGGTTAATTTCATGCCCCATCCCTGACCCTGACCTGCTCCAAAACATGAGCA-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------AAATTCAGTCCAACTTATTGGCCTCTCC
TCCTGAATTTTCCAGTTTTTGTAAAATTTCAGTCCA--------------------------------------------
-----ACTTGGCCTCTGTTGCAGTTTCAGTTTCTATGAAATGG-------------------------------------
-----------------------------------------TTGTTAGACTTGAGCTGTGTTTAACAAGGCTTTCCTGAG
TCCTGACCACTTTTCTCGCTTGCAACATGTTCATGCAGAATAGAGCGTGTCGCCGCC--TTGCTGAATGTTCCTGTGAGT
TTGACAAGGCTGCCACCATAAGCAACTGACG------ATAATGAGCTGGTGTTGCCTCCCAAGAGCCAAGAAACA---AC
AGG------ACAATAATCTCTACTCCCATAGACAACAGGAGATTCTTCACCCCCATAGCAGCTTAACCGGTAAGACCTCT
ATTTGGATTGCAAAATTTACTGCACAGAGTTTACAGATTTGGTGTTATGACTTTGTGATGCCTTAAGGCAGTATAGTATT
CTTCCATCAGTTTTTGT----TCCCAC---------------------------------------------ACAATTAC
AGATATGCCGGAACT-AAAAGTTCAACT----TTGCACTTTACTTATCATTCTTAACAAAATTCTGGACATAAA-TAACG
AAACATCCTTA-----------CCAAATGTTGGTCACTGCTTTCAGGCATTTCAGCTGAGAAGAACATAAGGCTCTTCTC
TTATGCTCAGTTGAAATCAGCAACCGACAACTTCGACCGCAACAACAAAGTCGGCCGAGGTGGTTTCGGGACAGTATATA
AGGTGACATTTTCATCTCCCTTTGTGAGGGAATTGTATGGCTCAAACTTGTTTGCTCTAAGCTGCCAATGCTTTGCATGG
CTGATCAGCATATATGTG-TTCAGGGAACCCTACCAAACAAGCAAGATGTAGCGGTCAAAGTTCTCTCTGCTGAATCCAG
ACAGGGAATCAGAGAATTTTTGACAGAAATCGACGTTATCAGCAACGTGAAGCACCCTAACCTTGTTGAGTTGATCGGCT
GTTGCGTCGAAGGAGACAACCGCATTTTGGTGTATGAGTACCTAGAGAACAGCAGCCTTGACCGTGCACTGTTGGGTATG
AA--------CCTATACTTATGTCACTATATTGACAAGGTTATTTTCGTTGCGACTTTTAACATTTTACCTTGTGCTCCC
GCAGGCTCTAACAGCGATCCTGCTAATTTTACATGGAGCGTAAGATCTTCCATATGCATCGGTGTTGCCAGAGGTCTTGC
GTACCTGCATGAAGAGATCCCATCACCGATCGTGCACAGGGATATCAAGGCTAGCAATATACTCATCGACAAAAATTACG
TCCCCAAGATCGGGGACTTCGGTCTGGCCAAACTATTTCCGGACAATATCACCCACATCAGTACCCGAGTAGCTGGAACA
ACGTGAGTACATTGCGATTTGCAGTTCATTTAACTGGAAAGTACAGTAGTTTCTATATTACTACTGCATTTCCTTCAATT
ATTAGTTATGGTTTCATATATCCCATTGTCTAGTTGCTCC-------TTCTCATGTTACCTTGAATTAACTCTGCTTACT
GGGTTGCATGCAGAGGTTACCTTGCACCTGAATATGCATGGCATGGTCAACTGACTAAGAAAGCAGATATATACAGCTTC
GGGGTCCTCGTAATCGAGATCGTCAGCGGCAAGAGTGGCTCGAGGAGCCTGCTGGCTGATGACAAGTTTCTTCTAGAGAA
GGTCAGTTCTTGCTTACTATCATGTGCTTCTCATCACCTGCCTATCTGTATTCCACGAACGAATACATGTTTGTGATACA
GTTTCAGAAATCAGAACAACGCAGTTAAGTTAAAAGAAAAAAAAAAGCTGAAGACATGTACTGTAATTCAGCTTATCACC
TTCTTATCTGCATTCCACAAATGAAGACATGTGC---TGTAATTCAGCTTTAAAATATCAGAACAACAACAAACTTTAAT
CAAAAAAAGAAAAAATGTCAAGTAAAACTAGATTTACTACAGTTATGTGG--TGAACTTTGCTTGCAGCATCTCCCTGAC
TTTATGCCAGTA--AAAAGATTA-------------------------------------GTC-TAACCCTGAA----CA
TTGACAACAGACTTGGGAGCTGTATGAAGCAGGGAAGCTCAAGGAACTGGTTGATCCAGACCTTGGGGATTACCCTGATG
AGGAGGCCATCAGGTTCATCAAGGTGGCCCTCTTCTGCACGCAGGCGGCGGCGGCGCGCCGCCCTTCGATGCTGCAGGTG
GTGAAGATGCTGTCCAAGCCAATCCGGATCAACGAGAGAGAGCTGACCGCGCCAGGGTACATCAGTGAGTACAATAGCGG
TGTCTCCAAGGCGACGGCCTCCAGCGACTCGAGGTTCAAGAACTCGACCACGGCGGATGATTCCGACATGTTCAGCACCG
TCGTGCCCCAGACGGTGACCGACATCAGCCCTAGGTGAAACAAGGCACCAG-GGAGGGTGGTCTGCTTTGCTCACTTGCA
TT-ATTG--TGTAGGGTGACAGTACCATAGAGGGCAGCACATACTTAGATATGTGCACTGTGCCTGCTCCTGAGTGTGTT
TGTGTCAATGCGGCAAGT-AGAAGCTGTAAATAA-----TAGACTAGTGATTCATGCCAGGGCAATGTAAAATTGCTGCT
TGTTTGGACAGCATGAAGTGGAGTAGTTGAATAGCATTTGCAGAGTCATCAATCAGGCATGTCATCGCATTCAGTTAACT
TCTCAGCTTTTGGTTTAAGACCATAATGTATTCACCCATCCAAAAAGTCTGGAACCAGGAGAAAACAGTGAAGAGTGCAG
TTGTTTGCTGTGATACTAAGCTGAATGTTCAGGGCTGATCGATACATAGCCATCCTTGGTGTGGATCTCTAC-AAAAAGA
TCGCTACAGGACAGGCGACACTCTGGGTATTGAAAACATAAGAAGTTTCAGTCTAAGCATAGTCATGGTTCTGGTGTTTC
----TGTAAAAAGAAAAGAAGCTACTCTGATGCTGCA---GGCTGCTCCTTCTCCGTCTCTGCGGCAGGGCCGTTGGCGG
GTGCTTCTTTGCTCTCTGCGGGCTGCTTGGCTCCGTTTGCTGGTGCTGGTGCGCCGTCTTCTGCACCTTCCTTGGCGCCT
TCCTTGGCAGCAGGGGCTGGTGGAGGTTGCATCATGTGCGGCGGCGGAGCATGCTTGAGCTTCACTAGGACCTGACGCAT
CCGGGAGAGGTCGGTGGGCTTGCCGGGCTTGGGACCCTGAATGACTGCGATGGATGGCTTCTTGTCCTTGTCTTTCTTGC
CCCGCTTCTCGATGGTAGCGATTTCATGTGGGATTAGCTCCGAGATTGATTTCCAGTACTGCTTGTCTGCGCTAGCATGG
AATTTCTCCTGGCTTTCAACGAAAATCTGCAGAACACCACAAGTCCACAGTGATCAATGCATATTTGCTTACAGAATACT
ACTTAGTTAAGAAATGCCCCCTCACGTACCTTCTCTCTTTCCCTGCTATGGACCTTATTCGTCTCACAGGTCTGTATCCT
C
>SNPs
-----------------------------------------------------------S--------------------
-------SSSSSSSS--------------------------S--------------------------------SSSSSS
S--------------------SSS--------------S-----------------------------------------
---S--------SSS-----------------------------------------------------------------
--------S-------------S-------------S---S------------------SSSSSSSSSS------S----
--------------------------------------------S--SSS--S-------S-S--------S---S----
--------------------S--SSSS---------S-----------S----S------S-SS----------S--SSS
SSSSSSS-S-SSSSSSSSS-----S---------------S--------------------S---SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S------------------------------
----------S-----------S---SSSSSS---------SS--SSSSSS-SSSSS-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-S--SS--S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------S--S---------S----------------------------------------------------
------S---------------S---SSSS--S---S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---------------S-S-S--------------
--------------S----S--S----------------S-------SSSSSS-SS-SS---------------SS----
--------S-----SS-SSSSSS-S-SSSS-SSSSSS--------------------------------------SSS--
----------S--S----------S------S--------------SS--S-S----S---------------------S
S----S---------------SS----SS-SS-SS------S---------S--------------S-S-----------
--S------S--S----------------S--SS------S--S-SS---------------------------------
---S------------------------SSSS------S----S--S------S---S----------------S-----
----------S------------------------------------------S--------------------------
S----------------S-------S------------------------------------------------------
--------------------------------------------------------------------------------
---------S-------------------------------------------------------------S--------
---------------------------------------------------------------------S----------
----------------S--S-----------------------S--------------S-----------S---------
--SSSSSSSS--------SS-------------------------S-----S-S---------S-----------S----
S---SS--------S-----S--S--------S------S----S-----------------------S--S--------
--------------------------------------------------------------------------------
-S-----------------------------------------S-----------------------------------S
----------------S---S-----------------------------------------------------------
----S------------------------------S--------------S-----------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
------------S-S----S-----------------------------S---------------------S-S------
------------SS---------S-------S------------S-------S-SSSSSSS--S---S------------
--S--SS-----------------------------------------------------S-------------------
----------------------------------------S--------------------------------S------
---------S-------------------------S-----------S--------------------------------
------------S--------------------------------------S----------------------------
--------------------------------------------------S----------S----------------S-
------S-------------------------------------------------------------------------
----S-S-S--SSSS-----------------------------------------------------------------
-------S-------------------------------------------------------S----------------
--------------------------------S-S-----------------S----------------S----------
---------------------------------S----------------------------------------------
S---------SS-------------------SSSS-S-SS-S-------SS--------------S--------------
-----------------------------------------S------------------------------------S-
----------------SS----------------S--------------------------S------------------
-----------------------------------------S--S-----------S-----------------------
S-------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------S----------------------------------------S------------------
--S-----------------------------------------------------------------------------
-
>forward_1635
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CGCCTGCACTTCCAGTTTTC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_3686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----CGCAGACTTGGGAGCTGTAT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>forward_2789
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CCATATGCATCGGTGTTGCG-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_4777
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------CAGCTTCACTAGGACCTGGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
