>input_sequence_39241
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------ATGAAGACCTGCACCATCGTTGGCAGAGTGCAGGCCAAGGGGCACCACTTCGTGAGAATCGACGGATACTCCCA
CACAAAGGCGATGATGGCCACCGGCGACCACGTCCTGTCCTGCGGCTTCCCCATCGGCGGCCGCATCTGGCGCGTCAAGT
ACTATCCCAACGGCTCCGCCAAGGAGCATGCCGACTGGATCTCCGTCAGCCTTCTCGTCGACCCCGACACCAAGGCAGCC
GCCGTGAAGGCGCGCTTCCGCTTCAGCCTTCTTGACACTGGCGGCGAGCCGGTGCCGGAATACGTCACCAGCAGCAGCGA
GATACGAACGTTTCCGTCGCCGGGACCTAAAGCCGGGGGGTGGGCCTTCCCCCGCTTCGTCAAGCGACTCGACCTGGAGA
ACTCGGCGCACCTGAAGGACGACGGCTTCGCCATCCGGTGCGACGTCGATGTCATGAGCGACCTGGGCCTGCACGTGGAG
GAGACGTTCCTCGACGTGCCGGAGCCCGACCTGCGCGTCCACCTCGCCCGCCTCCTTCGCACCAAGGACGGCGCCGACGT
GGCGTTCAAGGTCGGCGACGAGACGTTCGGTGCACACAGGTGCATGCTCGCGGCACGGTCTCCGGTCTTCAAGGCGGAGA
TCTCCGGCCACAAGGCTGATACGTGCGTCAACATCGACGGTATGGATGCTCCGGCGTTCCAGGCTTTGCTCCACTTCATA
TACACGGACTCCTTGCCGGACATGGCCGGGCAAGA---CGTGCCTGCCGTGGTACGGCAGTTAAGTGCGGCGGCGGACAG
ATATCAAGTGGCAAGGCTAAAGTTGGTCTGCGAGGACAAGCTAAACAAAACCACGGCGACCGTGGATCAGCGACAGCGGC
ATCACCGCCACCGGTGGTTCATGGGGACGTGCTTGGAGTTTGTGAATTCGCTTCACCCTCGACGCCAACAACCACAACAT
TCTCTCCCGTCGACGGCGACGCCGAGCTCCACGCCGTCCGCCTCGGCCATTGTCGTCTCCGAGACGAGCGGGCACCACGT
GCTCAAGATCGAAGGCTACTCGCGGACGAAGATGATGCTCCAAAGGGGACAGCATGTCGCCTCCGGAGAGTTCCAGGTTG
GAGGCCACACATGGCGCATCAAGTACTACCCCAACGGCTGCGACCAGGGCAGCGCAGGCTACATATCCATGCACCTCGAA
TGCACGATGGTCGCCACGGGCGTCGACGTCGTGCATGCAAAAGTCAAGCTCAGCTTGCCCGGTCACGCCACGGAGTATTT
TCCGTTGTGTGCTTTCACCAAAGACAAGTGCACTTTCACCAAGCACGACACTTCCCTCAGCTTCGACAGATTCGTCAAGA
GGTCCGAGCTGGAGAGCTCAAGCTATCTCAG-GGATGACTGCTTCAACGTCCGGTGCGACCTCGCCGTCTTCATGAACGA
GGTGCGCGTGGAGCCGGCGGTGGTGGTGCCGCCGCCCGCCCTGCCCCGGCACCTTTCCCAGATGCTTTCCTATCAGGAGG
GGAGCGACGTGTCGTTCAAGGTTGGCCGCGAGACATTCGCGGCGCACCGGTGCATCCTTGCTGCCCGGTCACCGGTCTTC
AAGGCAGAGCTCGTCGGCCCCATGAAGGAGAACAAGATGAGGCTCGTGCACATCGAGGACATGGACGCGGCCGTGTTCCA
GGCACTGCTCCACTTCATCTACACCGACGAGCTGCCCACCACGACCAGGAAAGAAGCGACAGCCATGGCCCAGCACCTGC
TCGTCGCGGCAGACAGATACGACATGGAGAGGCTAAAGCTTGTCTGCCAAGACAAGCTGTGCAGGCACCTCGACGCGGCC
ACCGCGGCGACGACCCTGGCACTGGCCGAGCAGCACCAGTACCCGCGGCTCAAGGAGGCCGTCTTCGCGTTTCTCTGCAG
CTCGCCTGCCAACTTGAGAGCAGTCTTAGCGAGCGATGGTTACGAGCATCTGACTGCGAGTTGCCCCTCCATTACCAAGG
AGCTTGTCGCCAGGCTCGCAGCAACCCTCTAG------------------------------------------------
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>chr3B_1_TraesCS3B01G204700
TTTAGAAAATTTTAAGAATTCCAAAATTTTGTTGCTATTTTGCTAAATATTCGGAACTTGTAAAAA-GTAGCCCATTGTT
TTTTAAA--AA---CAATTG--TTTTTCAAAATTATTTGGGATTTCTAAAA-AGAAAATAGCAC-TTAGAAAATGCTCCA
AATTTGAAAAGTATTCATATTTTAGTGAAATTTTCAAAATTAAAAATAATGTCCGTGTTTAAAAGATACATATTTTATAA
AAATCTTATGAATTTTCAACACATGTTACCGTT-TT-AAAAAAATGTGCAGAAATTAAGATAATGTTCATGTTTTTAT--
T-AAAAA-GTTGGTGTTTCT-AGAAAATGTTTGTGAATTTTAAGAAGTGTTCCCTTTCATATTTTGTTCGCGTTTTTTCG
AAAGTGTACACAATTTTCAAAAAACTGTTCAGGA-ATTAAAAAATTGTTCATGTTTCCTATAATATTCAGA-AACTTCAT
AACTTAAAA-TC-CCTCGATTGAAAGGATTGAAAGGAAGAGTAGATTGAATAACTCATGGCCCTTC-TCTG-CGTGCAAT
GACGTAACAAAACTCTTAAATGCCCTCGATTAATGAATGAAAAAATAGCGGATTGATTT--CTTCACACGTGACGAAACC
GAGAAACTAAATGTTATTTTTTCGTGTGCACACAGAGTTTTGCTTGCACATATAATTCCCATTGATTTTAAATGCATATT
ATTTTATCTCC-GTTGCAACGCACGGGCATATGTTCCAGCTACAACCTGTGTACATATCGTGCACAAAAGAACCGGTTTT
GAACTCCGGTGTACGGGATAGATACGAGGTGTTGAAC-AAATCTTGTTCCGTTGTTCGTATCATCGACTCCGCGTAGGCA
AGCCGGTTTCCTGGCAAGTACTG----------CAGTGCTACCCTCTC----TCG-----GAGATTAGATTCGCCGGTAA
ACAAACCGCGTAGCTATCACCAGCCGGTTGTAAAAGGGGATTAGAAAACCCTGTGCCCGCGATCCGATCCCTCCATCGTC
GCCGCCATGAAGACCTGCACCATCGTTGGCAGAGTGCAGGCCAAGGGGCACCACTTCGTGAGAATCGACGGATACTCCCA
CACAAAGGCGATGATGGCCACCGGCGACCACGTCCTGTCCTGCGGCTTCCCCATCGGCGGCCGCATCTGGCGCGTCAAGT
ACTATCCCAACGGCTCCGCCAAGGAGCATGCCGACTGGATCTCCGTCAGCCTTCTCGTCGACCCCGACACCAAGGCAGCC
GCCGTGAAGGCGCGCTTCCGCTTCAGCCTTCTTGACACTGGCGGCGAGCCGGTGCCGGAATACGTCACCAGCAGCAGCGA
GATACGAACGTTTCCGTCGCCGGGACCTAAAGCCGGGGGGTGGGCCTTCCCCCGCTTCGTCAAGCGACTCGACCTGGAGA
ACTCGGCGCACCTGAAGGACGACGGCTTCGCCATCCGGTGCGACGTCGATGTCATGAGCGACCTGGGCCTGCACGTGGAG
GAGACGTTCCTCGACGTGCCGGAGCCCGACCTGCGCGTCCACCTCGCCCGCCTCCTTCGCACCAAGGACGGCGCCGACGT
GGCGTTCAAGGTCGGCGACGAGACGTTCGGTGCACACAGGTGCATGCTCGCGGCACGGTCTCCGGTCTTCAAGGCGGAGA
TCTCCGGCCACAAGGCTGATACGTGCGTCAACATCGACGGTATGGATGCTCCGGCGTTCCAGGCTTTGCTCCACTTCATA
TACACGGACTCCTTGCCGGACATGGCCGGGCAAGA---CGTGCCTGCCGTGGTACGGCAGTTAAGTGCGGCGGCGGACAG
ATATCAAGTGGCAAGGCTAAAGTTGGTCTGCGAGGACAAGCTAAACAAAACCACGGCGACCGTGGATCAGCGACAGCGGC
ATCACCGCCACCGGTGGTTCATGGGGACGTGCTTGGAGTTTGTGAATTCGCTTCACCCTCGACGCCAACAACCACAACAT
TCTCTCCCGTCGACGGCGACGCCGAGCTCCACGCCGTCCGCCTCGGCCATTGTCGTCTCCGAGACGAGCGGGCACCACGT
GCTCAAGATCGAAGGCTACTCGCGGACGAAGATGATGCTCCAAAGGGGACAGCATGTCGCCTCCGGAGAGTTCCAGGTTG
GAGGCCACACATGGCGCATCAAGTACTACCCCAACGGCTGCGACCAGGGCAGCGCAGGCTACATATCCATGCACCTCGAA
TGCACGATGGTCGCCACGGGCGTCGACGTCGTGCATGCAAAAGTCAAGCTCAGCTTGCCCGGTCACGCCACGGAGTATTT
TCCGTTGTGTGCTTTCACCAAAGACAAGTGCACTTTCACCAAGCACGACACTTCCCTCAGCTTCGACAGATTCGTCAAGA
GGTCCGAGCTGGAGAGCTCAAGCTATCTCAG-GGATGACTGCTTCAACGTCCGGTGCGACCTCGCCGTCTTCATGAACGA
GGTGCGCGTGGAGCCGGCGGTGGTGGTGCCGCCGCCCGCCCTGCCCCGGCACCTTTCCCAGATGCTTTCCTATCAGGAGG
GGAGCGACGTGTCGTTCAAGGTTGGCCGCGAGACATTCGCGGCGCACCGGTGCATCCTTGCTGCCCGGTCACCGGTCTTC
AAGGCAGAGCTCGTCGGCCCCATGAAGGAGAACAAGATGAGGCTCGTGCACATCGAGGACATGGACGCGGCCGTGTTCCA
GGCACTGCTCCACTTCATCTACACCGACGAGCTGCCCACCACGACCAGGAAAGAAGCGACAGCCATGGCCCAGCACCTGC
TCGTCGCGGCAGACAGATACGACATGGAGAGGCTAAAGCTTGTCTGCCAAGACAAGCTGTGCAGGCACCTCGACGCGGCC
ACCGCGGCGACGACCCTGGCACTGGCCGAGCAGCACCAGTACCCGCGGCTCAAGGAGGCCGTCTTCGCGTTTCTCTGCAG
CTCGCCTGCCAACTTGAGAGCAGTCTTAGCGAGCGATGGTTACGAGCATCTGACTGCGAGTTGCCCCTCCATTACCAAGG
AGCTTGTCGCCAGGCTCGCAGCAACCCTCTAGGTAGACCTATACGAGATATCAAGTAGACGTTGTGTTACTTCGAGGGTG
TGTTTTGTTGTAGGTTCCTGCCTATGTTGTCTTGCCAAATTTTTACATAAAAGTTGGCTTGTCGTTTTTATGTTGATGTC
TGGGCGCAAGTCGCACGACCG-----------------------------------------------------------
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------------------------------------------------GTGAATTATATGGTCCACAGTCATAGAGTTCG
TGATAGAACTGTGAAGATACTGACACGAGCAAAGGTCCAATACGGATGGTCTAAGGTTTTTCTTTTATATAAACTTATTT
GTTTGGCCTCAATGCTTGGCATCAATGGATGCAGAGTTCAGGGTTAGCCTCATTTTCGCAAGGAAAACAAAAGAACCCCA
GTAGCCAGCGAACGTTCGCCGTGGGACATGGTAATTGCGAACATTTTGCATGACGACTTCTTCGCAGAACACATGACAAC
ATCTGACAAACAAAGGATTTTGTGCAGAAATTGTTGTGTTTGCTTCAAAGAATTGCCATACTCTCAA--GTCTCAGCATA
TGCAGGAACTGGTCATGGGTCTGCCCGAAACCGATATTCCAGCGAACACATCGAAGCATACTGTTCGAT--ACAATCCTA
GGGAAAGTTTATGCCAAGGGACGAGCCACAAACCTGCAGTCTGCTCATGCCGGTCTGGCGCGGTGTCACTCCATCAAGCT
TTGATGTGAAACTCC-ATCTCAGGTACGCCTGGCAGGCATGAGAAGATTAAAAACAACGGAAACACTAACGCCAACACGT
GTGGGCGTTACTCAACTCGTCCACACGCCTTGATCGTCGTCCAGTGCCTTTTGCACGAATCTTGACACGAAAAGGTTGAT
TTTGTGTGCCACGTAGGACGGGGCTGGTGTGTGGGTGTTGGAGAGTTTGCCCACACGCTAGCATCATGCTGCTTTGCCAG
CTGCACTATGTGGGCGAACTAATTTCTACCCACACAATCAGCCACCTAGTTCATGCGCATGCGGGCGAACTACTTTTCGC
CCACACAAAACTCCTAAGTTGTGG
>chr6D_1
TTTGGAAAATGTTCAGAATTCCAAAATCTTGTTGCTATTTTGAAAAATATTCGGTACTTGCAAAAA-GTTGCCCTTTTTT
GA--AAAA-AC---TTATTG--TTTTTCAAAATTGTTCAAGATTTCTAAAA-AGAAAATGACATTTCAAAAAATGCTCCG
AATTTGAAAAATAATCATGTTTTAGTGAAATTTTCAAAATTAAAAATAATGTTCGTGTATAAAAGATACACATTTTCTAA
AAATATTATGAATTTTCAACATATGTTCTCATT-TT-AAAAAAATTTGCACAAATTCAAATAATGTTCATGTTTTT-T--
A-AAAAA-GTTGGTGTTT-T-AGAAAATGCTTGTGAATTTTAAAAGATGTTCCCTTTCATATTGTGTCCGCGTTTTTTTG
GAAGTGTGCATAATTTTCAAAAACG-GTTCAGAATTTAAAAAAATTGTTCATGTTTCCTAGAATATTCATA-AACTTCAT
ACCTTAAAA-TC-CCTCGATTGAAAGGATTGAAAGGAAGTGTAAATTGAATAACTCATGGACGTTC-TCCGGCATACAAC
GACGTAACAAAACTCTTAAATGCCCTTGATCAATGAATGGAAAAATAGCGGATTGATTTTCCTTCACACGCGGCGAAACC
GAGAAGGTAAATGTTTCTTTTTTATGTGCACACAGGGCTTTGCTTGCACATATAATTCTCACTGATTTTAAATGCATACT
ATTTTATCTCCCGTTGCAACGCACCGGCATATGTGCTAGTTACA------------------------------------
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>chr6A_1
TTTGGAAAATGTTCAGAATTCCAAAATTTTGTTGCTATTTTGAAAAATATGTGTAACTTGCAAAAA-GTTGCCCATTTTT
TA--AATA-AA---ATATTG--TTTTTCAAAATTATTCGGAATTGCTAAAA-AGAAAATGGCATTTCAAAAAATGATCCA
AATTTTAAAAATATTAATGTCTCAGTTAAATTTTCAAAATTAAAAATAATGTTTGTGTATAAAAGATACACATTTTCTAA
AACAATTATGAATTTTCAACACATGTTCCCCTT-TT-AAAAAA-TGTTCACAAATTCAAATAATGTTCTTGTTTTTAT-A
G--AAAA-GTTGGTGTTTTT-AGAAAATGTTTGTGAATTTTAAAAGAAGTCCCCTTTCATATTTTGTTTGCTTTCTTTCG
AAAGTGTACATAATTTTTAAAAAACTATTCAGGA-TTTAAAGAATTGTTCAAGTTTTCTAGAATATTCAGA-AACT-CAT
ACCTTAAAATCC-CCTCGATTGAAAGGATTGAAAGGAAGAGTAGATTGAATAACTCATGGGCCTTC-TCTGGCGTATGGT
GACGTAACAAATCTC-TAAATGCCCTCGATCAATGAATGAAAACATAGCGGATTGGTTT--CTTCACACGCGGCGAAACC
GAGAAGCTAAATGTTCCTTTTTCGTGTGCACACAGGGTTTTACTTACATGTATAATTCTCACTGACTTTAAATGCATACT
ATTTTATCTCCCGTTGCAACGCACGGGCATA-------------------------------------------------
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>chr1D_1
TTTGGAAAATGTTCAGAATTCCAAAATCTTGTTGCTATTTTGAAAAATATTCGGTACTTGCAAAAA-GTTTCCCTTTTTT
G---AAAA-AA---ATATTG--TTTTTCAAAATTGTTCAGCATTTCTAAAA-AGAAAATGACATTTCAAAAAATGCTCCG
AATTCGAAAAATAATCATGTTTTAGTGAAATTTTCAAAATTAAAAATAATTCTTGTGTGTAAAAGATACACATTTTCTAA
AAATATTATGAATTTTCAACATATGTTTCCGTT-TT-TAAAAAATGTGCACAAATTCAAATAATGTTCATGTTTTTGT--
A-AAAAA-GTTGGTGTTT-T-AGAAAATGCTTGTGAATTTTAAAAGATGTTCCCTTTCATATTGTGTTCCC-TTTTTTTG
GAAGTGTACATAATTTGCAATAAACTGTTCAGAA-TTTAAAAAATTGTTCATGTTTCCTAGAATATTCATA-A-CTTCAT
ACCTTAAAA-TC-CCTCGATTGAAAGGATTGAAAGGAAGCATAGATTGAATAACTCATGGACGTTC-TCCGGCATACGAC
GACGTAACAAAACTCTTAAATGCCCTTGATCAATGAATGGAAAAATAGTGGATTGATTTTCCTTCACATGCGGCAAAACC
GAGAAGGTAAATGTTTCTTTTTTATGTGCACACAGGGTTTTGCTTGCACATATAATTCTCACTGATTTTAAATGCATACT
ATTTTATCTCCCATTGCAACGCACGGGCATATGT----------------------------------------------
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>chr4D_1
TTTGGAAAATGTTCAGAATTCCAAAATATTGTTGCTATTTTGAAAAATATTCGGTACTTGCAAAAA-GTTGCTCTTTTTT
G---AAA--AA---AAATTG--TTTTTCAAAATTGTTCAAGATTTCTAAAA-AGAAAATCACATTTCAAAAAATGCTCCG
AATTCGAAAAATAAACATGTTTTAGTGAAATTTTCAAAATTAAAAATAACGTTCATGTATTAAAGATACACATTTTCTAA
AAATATTATGAATTTTCAACATATGTTCCCGTTTTT-AAAAAA-TGTGCACAAATTCAAATAATGTTCATGTTTTTGT--
A-AAAAAAGTTGGTGTTT-T-AGAAAATGCTTGTGAATTTTAAAAGATGTTCCTTTTCATATTTTTTTCGCGTTTTTTTG
AAAGCGTACATAATTTTCAAAAAACTGTTGAGAA-TTTAAAAAATTATTCATGTTTCCTAGAATATTCATAAA-CTTCAT
ACCTTAAAA-TC-CCTCGATTGAAAGGATTGAAAGGAAGCGTAGATTGAATAACTCATGGACGTTC-TCCGGCATACGAC
GACGTAACAAAACTCTTAAATGCCCTTGATCGATGAATGGAAAAATAGCGGATTAATTTTCCTTCACATGCGGCGAAACC
GAGAAGATAAATGTTTCTTTTT-ATATGCACACAGGGTTTTGCTTGCGCATATAATTCTCACTGATTTTAAATGCATATT
ATTTTATCTTCCGTTGCAACGTACGGCCATATGT----------------------------------------------
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>chr7D_1
TTTGGAAAATGTTCAGAATTCCAAAATTTTGTTGCTATTTTGAAAAATATTCGGAACTTGCAAAAA-GTTTCCCATTTTT
G---CAA--AA---AACATCATTTTTTAAAAATTATTCGAGATTTCTATAA-AGAAAATTGCTTTTCAAAAAATGCCCCA
AATTTGAAAAATATTCTTTTTTAAGTGAAATTTTCAAAATTAAAAA-AATATTCGTGTATAAAAGATACACATTTTCTAA
ATATATTATGAATTTTCAACACATATTCCCGTTTTAAAAAA---TGTGCACAATTTCAAATTCATGCT---TTTTAAT-A
A-AAAAA-GTTGATGTTT-TCAGAAAATGTTCGTGAATTTTAAAAGATGTCCGCTTTCACATTTCGTTCGCGT-TTTTCA
AAAGTGTACATAGTTTTCAAATAAATGTTCAGGA-TTTAAAAAATTGTTCATGTTTCTTAGAATATTCAGAAA-CTTCAT
ACCTTAAAATCG-CCTCGATTGAAAGGATTGAAAGGAAAAGTAGATTGAATAACTCATGGGCCTTC-TCTGGCGTACGAT
GACGTAACAAAACTCTTAAATGCCCTTGATCAATGAATGAAAAAATAGCGGATTGA--TTCCTTCACACGCGGCGAAACC
GAGAAGTTAAATGTTCCTTTTTCGTGCGCACACAGGGTTTTGCTTGCACATATAATTCTAACTGACTTTAAATGCATACT
ATTTTATCTCTCGTTGCAACGCACGGGCATATGT----------------------------------------------
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>chr7B_1
TTTTGAAAATGTTCAGAATTCCAAAATTTGGTTGCTATTTTGAAAAATATTCAGAACTTGCAAAAA-CTTGCCCATTTTT
TA--GATAGAA---ATATTG--TTTTTCAAAATTGTTTGATATTTCTAAAA-ATGAAATGGCATTTCATAAAATGCCCCA
AATTTGAAAAATATTCATGTTTTAGTGAATTTTTCAAAATTAAAAATAATGTTCTTGTATAAAATATACACGTTTTCTAA
AAATCTTATGAATTTTCAACACATGTTCCCCTT-TT-AAAAAA-TGTTCACAAATTCAAATAATGTTCATGTTTTTAT--
A-AAAAA-GTTGGTGTTT-TCAGAAAATGTTTGCGAATTTTAAAAGATGTTCCCTTTCATATTGTGTTCAAGTTTTGTTG
AATGTGTACATAATTTTGAAAAAACTGTTGAGGA-TTTAAATAAGTGCTCATGTTTTGTAGAATATTCAGAAA-CTTCAT
ACCTTAAAATTC-CCTCGATTAGAAGGATTGAAAGGAAGAGTAGATTGAATAACTCATGGGCCTTC-TCTGGTGTATGAT
GATGTAACAAAACTCTTAAATGCCCTTGATTAATGAATGGAAAAATAGCGGATTGA--TTCCTTCACACATGGCGAAACC
GAGAAGCTAAATGTTCCTTTTTCATGTGCACACAGGGTTTTGCTTGCACATATAATTCTCCATGACTTTAAATGCATACT
GTTTTAACCCCCATCGCAACGCACGTGCATATGTGCTAGTTACA------------------------------------
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>chr7A_1
TTTGGAAAATGTTCAGAATTCGAAAACTTTGTTGCTATTTTGAAAAGTGTTTGGAACTTT--AAAAAGTTTCCCATTTTT
T---AAA--TA---ATATTG--CTTTTCAAAATTGTTCGAGATTTCCAAAA-AGGAAATGGCATTTTAAAAAATGCTCCG
AATTCAAAAAATATTATTATTTTAGTGAAATTTTCAAAATAAAAAATAATATTAGTATATAAAACATACACATTTTCTAA
AAATCTTATGAATTTTCAACACATGTTCTTGTTTTAAAAAAAA-TATTCACAAATTCAAATAATGTTCATGTTTTTAT-A
ATAAAAA-ATTGGTGTTT-TAAAAAA----TTGTGAATTTTAAAATATGTTCCCTTTCATATTTTGTTCGCGTTTTTTCA
AAAGTGTACATAATTTTAAAAAAATTGTTCAGGA-TTTAAAATATTGTTCATGTTTCCTAGAATATTCAGAAA-CTACAT
ACCTTGAAATCC-CCTCGATTGAAAGGATTGAAAGGAAGAGTATATTGAATAACTCATGGGTCTTC-TCTCGCGTACGAT
GACGTAACAAAACTCTTAAATGCCCTCAATCAATGAACGGAAAAATAGTGGATTGA--TTCCTTCACACGCGGCGAAACC
GAGAAACTATATGTT-TCTTTTCGTGTGCACGCAGGGTTTTGCTTGCACATATAATTCTCATTGATTTTAAATGCATACT
ATTTTATCTCCCGTTGCAACGCACGGGCATATGT----------------------------------------------
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>chr2D_1
TTTGGAAAATGTTTAGAATTCCAAAATTTTGTTGCTCTTTTGAAAAGTAGTCGGAACTTGCAAAAAAGTTGCCCATTTTT
T---AAA--TATTTTTATTG--CTTTTCAGAATTATTAGTGATTTGTAAAAAATAAAATTGCATTTCTAAAAATGCTCCA
AATTTGAAAAATATTCATGTTTTAGTGAAATTTTCAAAAGTAAAAATCATATTTGTGTATAAAAGATACACATTTTCTAG
AAATCTTATGAATTTTCAACACATGTTCCCGTTTTAAAAG--A-TGTTCACAAATTGAAATAATGTTCATGTTTTTAT-A
A-AAAAT-GTTGGTGTTT-TCATAAAATGTCTGTGAATTTTAAAAGATGTTCCCTTTCATATTTTGTTCGT-GTTCTTTG
AAATTGTACATAATTTTAAAA-AACTGTTCAGGA-TTTCAAAAAGTGTTCATGTTTCCTAGAATATTCAGAAA-CTTCAT
ACCTTCAAAT-C-CCTCGATTGAAAGGATTGAAAGGAAGAGTAGATTGAATAACTCATGGGCCTTTGTCTGGCGTACGAC
GACGTAAGAAAACTCTTAAATGCCCTCGGTCGATAAATGGAAAAATAGCGGATTGA--TCTCTTCACACGCGGCGAAACC
GAAAAGCTAAATATT-TTTTTTCATGTGCACACAGGGTTTTGCTTGCACATATAATTCTCACTGACTTTAAATGCATACT
TTTTTATCTCCCGTTGCAACGCACGGGCATATGT----------------------------------------------
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>chr7A_5
----GAAAATTTTCAGAATTCCAAAATTTTGTTGCTATTTTGAAAAATATTCAGAACTTGCAAAAA-GTTTCC--TTTTT
T---AAAA-GA---ATATTG--TTTTTCAAAATAGTTTGTGATTTCTAAAA-ATAAAATGGCATTTCAGAAAATGCTCCA
AATTTGAAAAATGTTAATGTTTTAATGAAAATTTTAAAATT-AAAA-AATGTTAGTGTATAAAAGATAAACATTTTCTAA
AAATATTATGAATTTTCAACACATGTTCCCGTTTTAAAAAAA--TGTTCACACATTGAAATAATGTTCATGTTTTT-TGA
A-AAAAA-GTTGGTGTTT-TCAGAAAATGTTTGTGAATTTGAAAAGATGTTCCCTTTCATATTTTGTTGAC-GTTTTTTG
GAAGTGTACATAATTTTCAAAGAACTGTTCAGGA-TTTAAAAAATTGTTAATGTTTCCTAGAATATTCAGAAA-CTTCAT
ACCTTCAAAT-CTCCTCGATTGAAAGGATAGAAAGGAAGAGTAGATTGAATAACTCATGGGCCTTC-TCTGTCGTACGAT
GATGTAAC-AAACTCTTATATGCCCTCGATCAATGAATGGAAATATAGCGGATTGA--TTCCTTCACACGCGGCAAAATC
GAGAAACTAATA-TTCATTTTTCGTGTGCACACAGGGTTTTGCTTGAACATATAGTTCTAACTAACTTTAAATGCATAGT
ATTTTATCTCCCATTGCAACGCATGGGCATATGT----------------------------------------------
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>chr3D_695
TATTTTCTCG----------------------------------------------------------------------
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----------CCGTTGCAATGCACGGGCATTTATGCTAGTTACGACCTATGTACATATCGTGCACAAAAGAACCGGTTTT
GAACTCCGGTGTACGGGATAGATACGAGATGTTGAAC-AAATCTTGTTCCGTTGTTCGTATCATCGACTCCGCGCAGGCA
AGCCGGTTTCCTGGCAAGTACAGTACCGTACTACACTGCTACCCTCTCGGAGTCG-----GAGATCAGATTCGCCGGTAA
ACAAACCGCGTAGCTATCACCAGCCGGTTGTAAAAGGGGATTAGAAAACCCTGTGCCCGCGATCCGATCCCTCCATTGTC
GCCGCCATGAAGACCTCGACCATCGTTGGCATGGTGCAGGCCAAGGGGCACCACTTCCTGAGAATCGACGGATACTCCCA
CACAAAGGCGATGGTGGCCACCGGCGACCACGTCCTGTCCTGCGGCTTCCCCATCGGCGGCCGCACCTGGCGCATCAAGT
ACTACCCCAACGGCTCCGCCAAGGAGCATGCCGACTGGATCTCCGTCAGCCTTCTCGTCGACCCCGACACCAAGGCAGCC
GCCGTGAAGGCGCGCTTCCGCTTCAGCCTTCTTGACGTGGGCGGCGAGCCGGTGCCGGAATACGTCACCAGCAGCAGCGA
GATACGAACGTTTCCGTCGCCGGGTGAACGTT-----------------------TTCGTCAAGCGACTCGACCTGGAGA
GCTCGGCGCACCTGAAGGACGACGGCTTCGCCATCCGGTGCGACGTCGATGTCATGAGCGACCTGGGCCTCCGCGTGGAG
GAGACGTTCCTCGATGTGCCGGAGCCCGACCTGCGCGTCCACCTCGCCCGCCTCCTTCGCACCAAGGACGGCGCCGACGT
GGCGTTCAAGGTCGGCGACGAGACGTTCGGTGCACACAGGTGCATGCTCGCGGCACGGTCTCCGGTCTTCAAGGCCGAGC
TCTCCGGCCACAAGGCTGATGCGTGCGTCAAGATCGACGGTATGGATGCTCCGGCGTTCCAAGCTTTCCTCCACTTCATA
TACACGGACTCGTTGCCGGACATGTCCGGGCAAGA---CGTAGCTGCCGTGGCACGGCAGTTAAGCGCGGCGGCGGACAG
ATATCAAGTGGCGAGGCTAAAGTTGGTCTGCGAGGACAAGCTAAACAAAACCACGGCGATCGTGGATCAGCGACAGCAGC
ATCACCGCCACCGGTGGTTCATGGGGACGTGCTTGGAGTTTGTGAATTCGCTTCACCCTCGACGCCAACCGCCACAGCAT
TCTCTCCCGTCGACGACGACGCCGAGCTCCACGCCCTCCGCCTCGGCCATCGTCGTCTCGGAGACGAGCGGGCACCACGT
GCTCAAGATCGAAGGCTACTCGCGGACGAAGATGATGCTCCAAAGGGGTCAGCATGTCGCCTCCGGGGAGTTCCAGGTTG
GAGGCCACACCTGGCGCATGAAGTACTTCCCCAACGGCTGCGACCAGGGCAGCGCAGGCTACATATCCATGCACCTCGAA
TGCACCGGCATCGCCACGGGCGTCGACGTCGTGCATGCAAAGGTCAAGCTCAGCTTGCCCGGTCACGCCACGGAGTATTT
TCCGTTGTGTGCTTTCACCAAAGACGAGTGCACTTTCACCAAGCACGACGGCTCCCTCAGCTTCGACAGATTCGTCAAGA
GGTCCGAGCTGGAGAGCTCAAGCTATATCTCAGGACGACTGCTTCAACGTCCGGTGCGACCTCGCCGTCTTCGTGAACGA
GGTCCGCGTGGAGCCGGCCGTGGTGGTGCCGCCGCCCGCCCTGCCCCGGCACCTTTCCCAGATGCTTTCCTATCAGGAGG
GGAGCGACGTGTCGTTCAAGGTTGGCCGCGAGACATTCGCGGCGCACCGCTGCATCCTTGCCGCCCGGTCACCGGTCTTC
AAGGCAGAGCTCGTCGGCCCCATGAAGGAGAACAAGATGAGGTGCGTGCACATCGAGGACATGGATGCAGACGTGTTCGG
GGCACTGCTTCACTTCATCTACACCGACGAGCTGCCCGTCACGACCAGGAAAGAAGAGACGGCCATGGCGCAGCACCTGC
TCGTCGCGGCGGACAGATACGACATGGAGAGGCTCAAGCTTGTCTGCCAGGACAAGCTATGCAGGCACCTCG--GCGGCC
ACCGCGGCGACGACCCTGGCATTGGCCGAGCAGCACCAGTACCCACGGCTCAAGGAGGCCGTCTTTGCGTTCCTCTGCAG
CTCGCCTGCCAACTTGAGAGCGGTCTTAGCGAGCGATGGTTACGAGCATCTGACTACGAGTTGCCCCTCCATTACCAAGG
AGCTTGTGGCCAGGCTCGCAGCAACCCTCTAG----ACCTGTACGAGAGATCAAGTAGAAGTAGTTTTGCTTTGAGGGTG
TGTTTTGTTGTCGGTTCATGCCTATGTAGTCTTGCCAAATTTTTACATAAAAGTTGGCCTGTCATTTTTATGTTGATGTT
TCGACGCAAGTCGCACAGATTATACGGCGAAATCACTAGTTAAGGAGTACTCGTTGCCAGCGACAGGTGACGCACATGCA
GCGCGTCACTTGTCGCAACCTGTGACTTTTTCCTTTTTTTCATAGTTTCGTTTATTCAAAACGTTATATCTTTCAAACCA
TGTGTTCAACTCTCAAACCGCTTTCACCGTTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGTT
TTGACGAACTTTTTTTAACGAAAAAAACCGGCCGACAAAATCGGGCGAAAAAACCGAACTGGGAGCACGGTTTTTTCCCT
TTCCGAAAGAGGCATACCCGTGACTCTCGCGGAAGGAAAAAAGAAGAGAAAACGTGTTTTTTTTGTTTCCGAGGAGGCAC
GGCCGTGACTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGGAAAAAAAAAACAGAAAACGCGTTTTTTTCCGTTTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCCGTTTCCGAGAGGCATGGCCGTGTCTCT
CGCGGAAGCAAAACCGTGACTCTCGCGAAAAAAAAACAGAAAACGCGTTTTTTTTCGTTTCCAAGAGGCACGGCCGTGAC
TCTCGCGAAAGCACAACCGTGCCTCTTGCGGAAGCAAAACCGTGACTCTGCGAAAGGAAAAAAAACAGAAAACATGTTTT
TTCCCGTTTTCGAGAGGAACGGCCGTGACTCTCGCGAAAAACAAAACCGTGACTCTTGCGAAAGGAAAAAAACACGTTTT
TTCACGCAAATTTTTTTTTTGATCGATAAGCTAAGGAAGACCGGTGAAAAACCAAAACGTCAAAAAAACCCAGAAAAAAA
CCATTTAAATAGCTGAAAACACGTGCGGAAAAAAAATCCGGAGGGGGCGCCCAGAGTGCAACACGTGGCGAATGGCTGAA
AGCGCGCCAAGAGGCGCTGATCGTTGCCAGGCTCCCGAAGGAGTGCTCGTTAACTAGTTGCTCCACAGTCATAGAATTTG
TGATAGAATTGTGAAGATGCTGACACAAGCAAAGGTCCAATACGGAT---------------------------------
-----GCCTCAATGCTTGGCATCAATCAATGCAGAGTCCAGGGTTAGCCTCATTTTAGGAAGGAAAACAAAAGAACCGCA
GTAGCCAGCGAACGTTCGCTATGGGACATGGTAATTGCGAACATTTTGCATGACAACTTCTTCGCAGAACACATGACAAC
TTCTGACAAACAAAGGATTTTGTGCAGAAATTTTTGTGTTTGCTTC-AAGAATTGCCATACTCTCAAAAGTCTCAACATA
TGCAGGAATTGGTCATGGGTCTGCCCGAAACCGATATTCCAGCAAACACATCGAGGCATACTGTTCGATATACAAATCTA
GGGAAAGTTTATAACAAGGGAAGAGCCA-AAACCTGCAGTCTGCTCCTGCCGGTATGGTGCGGCATCACTCCATCAAGCT
TTGGTGTGAAACTTGAATCTCAGGTACGCC--------------------------------------------------
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>chr3A_776
AACTC---------------------------------------------------------------------------
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--------GTGTACGGGATAGATACGAGCTGTTGAAAAAAATCTTGTTCCGTTGTTCGTGTCATCGACTCCTCATAGGCA
AGCCGGTTTCCTGGCAAGTATTG----------CACTGCTACCCTCTC----TCGGAGTCGAGATCAGATTCACCGGTAA
ACAAACCGCGTAGCTATCACCAGCCGGTTGTAAAAGGCA----------------------ATCCGATCCCTCCATTGTC
GCCGCCATGAAGACCTCGACCGTCGTTGGCAGGGTGCAGGCCAAGGGGCACCACTTGCTGAGAATCGACGGATACTCCCA
CACGAAGGCGATGGTGGCCACCGGCGACCACGTCCTGTCCTGCGGATTCCCCATCGGCGGCCGCACCTGGCGCGTCAAGT
ACTATCCCAACGGCTCCGCCAAGGAGCATGCCGACTGGATCTCCGTCAGCCTTCTTGTTGACCCCGACACCAAGGCAGCA
TCCGTGAAGGCGCGCTTCCGCTTCAGCCTTCTTGACATGGGCGGCGAACCGGTGCCGGAATACGTCACCAGCAGCAGCGC
GATATGAACGTTCCCGTCGCCGAGACCTAA---CGAGGGCTGGGCCTTCCCCCGCTTCGTCAAGCGACTCGACTTGGAGA
ACTCGGTGCACCTGAAGGACGACGGCTTCACCATCCGGTGCGACGTCGATGTCATGAGCGACCTGGGCCTGCACGTGGAG
GAGACGTTCCTCGATGTGCCGGAGCCCGGCCTGCACGTCCACCTCGCCCGCCTCCTTCGCACCAAGGACGGCGCCGACGT
GGCGTTCAAGGTTAGCGACGAGACGTTTGGTGCACACAGCTGCATGCTCGCGGCACGGTCTCCGGTCTTCAAGGCGGAGC
TCTCCGGCCACAAGGCTGACATGTGCGTCAAGATCGACGGTATGGATGCTCCGGTGTTCCAAGCTTTCCTCCACTTCATA
TACACGGACTCGTTGCCGGACATGGCCGGGCAAGAGGACGTGCCTGCCGTGGTACGACAGTTAAGCGCGGCGGCGGACAG
ATATCAAGTGGCAAGGCTAAAGTTGGTCTGCGAGGACAAGCTAAACAAAACCACGGCGATCGTGGATCAGCGACAACGGC
ATCACCGCCAACGGTGGTTCATGGGGACGTGCTTGGAGTTCATGATTTTGCTTCACCCTCGACGCCAACCGCCACAACAC
TCTCTCCCGTCAACGACGACGCCGAGCTCCACGCCCTCCGCCTCGGCCATCGTCGTCTCGGAGACGAGCGGGCACCACGT
GCTCAAGATCGAAGGCTACTCGTGGACGAAGATGATGCTCCAAAGGGGCCAGCATGTCGCCTCCAGAGAGTTCCAGGTTG
GAGGCCACACCTGGCGCATGAAGTACTATCCCAACGGCTGCGACCAGGGCAGCGCAGGCTACATATCCATGCAGCTCGAA
TGCACCATGGTCGCCACGGACGTCGACGTCGTGCATGCAAAGGTCAAGCTCA----------------------------
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>chr3A_2237
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---------------------------------------------AAGCTCAGCCTGCCCGGTCACGCCACGGAGTATTT
TCCGTTGTGTGCTTTCACCAAAGACGAGTGCGCTTTCACCAAGCACGACAGCTCCATCAACTTTGACAGATTCGTCAAGA
GGTCCGAGCTGGAGAGCTCAAGCTATCTCAG-GGACGACTGCATCAGCGTCCGGTGCGACCTCGCCGTCTTCGTGAACGA
GGTGCGCGTGGAGCCGGCCGTGGTGGTGCCGCCGCCCGCCCTGCCCCGGCACCTTTCCCAGATGCTTTCCTATCAGGAGT
GGAGCGACGTGTCATTCAAGGTTGGCCGTGAGACATTCGCGGCGCACCGCTGCATCCTCGCTGCTCGGTCACCGGTCTTC
AAGGCAGAGCTCGTCGTCCCCATGAAGGAGAACAAGATGAGGTGCGTGCACATCGAGGACATGGACGTGGCCGTGTTCCG
GGCATTGCTCCACTTCATCTACACCGACGAGCTGCCCGCCACGACCAGGAAAGAAGAGACGGCCATGGCCCAGCACCTGC
TCGTCGCGGCGGACAGATACGACATGGAGAGGCTGAAGCTTGTCTGCCAGGAC-AGCTGTGCAGGCACCTCGACGCGGCC
ACCGCGGCGACAACCCTGGCATTGGCCGAGCAGCACCAATACCCACGGCTCAAGGAGGCCGTCTTCGTGTTCCTCTGCAG
CTCGCCTGCCAACTTGAGAGCGGTCTTGGCGAGCGACGGTTACGAGCATCTGACTATGAGTTGCCCCTCCATTACCAAGG
AGCTTGTCGCCAGGCTCGCAGCAACCCTCTAG----ACCTATACGAGAGATCAAGTAGACGTCGTGTTACTTTGAGGGTG
TGT-----------------------------------------------------------------------------
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>SNPs
---S---------S----------------------------SS----------------S--------S-------S--
-SSS----------S--------------------------------------------S---S----------------
----------S-----------------------------------------S-----S-----------S-----S---
---------------------------S----------------------S-----S-S---------------------
S-----------------S------------------------S-SS---------------------------------
----------S------------------------S------------------------S-------------------
-S----------------------------------------------------------S--------------S----
------------------------------------------------------------------------S-------
---------------S-------------------S----------------------S---------------------
----------------------------------S-S--S--------S-------------------------------
----------------------------S---------------------------------------------------
-----------------------------------S-----------------------------S--------------
----------------------------------------------------------------------------S---
----------------SS--------------S------------------------S----------------------
-------------S---------------------------------------------------S--------------
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-------------------------------------SS-----------------------------------------
------------------------------SSS--S---S----------------------------------------
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--------------S-----------------------------------------------------------------
-------------------------------------------------------------------------------S
-------------------------------S-----------------------------S-----S------------
-----------S-----------------------------------------------------S--------------
-----------------------------------------------------------S--------------------
---------------------------------------------------------------------SS---------
---------------S-------------------S--------------S--------S--------------------
------------------------------------------------S-------------------------------
----------S--------S------------------------------------------------------------
-----S-----------------------------------S--------------------------------------
-------------------------S------------------------SS----------------------------
-----------------------------------S------------------------------------S-------
------------------S-------------------------------------------------------------
-------------------------------------------------S------------------------------
------------------------------------------SS-----------------------------------S
-------------------------------------S------------------S---S-------------------
----------S-----------------------S--------------S------------------------------
---------------------S----------------------S--------------------------S--------
---------------------S---------------------------------S------------------------
--------------------------------SSSS------------S-------------S---------S-------
-----------S-----S---------S------------------------------S----S---------------S
-S-S------------SSSSS-----------------------------------------------------------
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--------------------------------------------------S--S--SS--S--------------S--S-
--------S---------S-------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------SS---------S------------------S-S------------------S--
-------------------SS---------------------------------S-------------------------
S-------------------------------S-------------S----------------------------S----
--------S----------------------------------S----------S--------------------SS---
------------SS-------S------S-----------------S-------S---S----SS---------------
---S---------SS---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_946
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---------------------------------------------TGCTACCCTCTCTCGGAGATT--------------
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>reverse_2720
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-------------------------------------------------------------------------------A
GGCACTGCTCCACTTCATC-------------------------------------------------------------
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>forward_1134
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--------------------------------------------------------------------------CTCCCA
CACAAAGGCGATGA------------------------------------------------------------------
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>reverse_2758
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-------------------------------------ACCACGACCAGGAAAGAAGC-----------------------
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>forward_1318
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------------------CGCTTCAGCCTTCTTGACAC------------------------------------------
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>reverse_4579
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------------------ACTGACACGAGCAAAGGTCC------------------------------------------
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------------------------
