>input_sequence_39225
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-----------------------------------------ATGGAGGCAGTCGCCAGAGCAAGCATCGCGGCAGGCTCG
CACGCACGGGTCCCCCTGTGCCGGCGACCGCGGCCGC------GCCACGCCGTGCGCTGTCTCCGGGGACGACCCTCGGT
GGCCTGCGCGGCCGCCGCCGACGCCGATGTCGTCCGTCTCTTCGACGCCGCCAAGCTCACGGTAATAAGGGAGA-CG---
-----CTCTGCCGTCCTCCAGCATTCACGGCGGCTTCCTTCGAATGCTGAGGCACTTATCTCGTA--TTATGCGGCATTG
TTTCAGGTGGACGAGTTTGTGAAGAGCGGGATGGTGGTCGGGCTCGGCTCCGGCGCCGCGTCCGGGCTCGCCGTCCAATA
CCTCGGCACGCGCCTCCGGCGAGGCTCGCTGACCGGCATTGTTGGCATACCCTCGTAAGCATTCCAATTGCTTCACTGCC
ACTCCGTGGTTCATCTGTGCCACATGAGCTTTACTTGCATCCTGCACAACCGCAATCCCGCATGCATTCGCTCGCTCCTG
ATCATCGGTTGCGTCTAATCGGTTGTTGGGGTTGATCAGCCAGGTCTGTGATCTGTGCAAGTGAGGCGGAGAAAGCCGGG
ATCAAGGTCGGCAGCCACGAGGAAGGCACCCAAGTACGCTCTATTCTCTTGTCACCATTGTAAA-TCTTGCAGGCAAGAA
AGAAGAGGATTTTGGCTGAAACCATGCTCACTGACGTATAGATTGATTTTGCTTTCGCTGATGCTGATGTAATTGAAGAG
GGCACACTCGCTGCTGTCATCGGGCGCGGGAAAACCGAAAGCGGACAGCCTTCTTTCATACAAGAGAAGGTTAGCGCAAC
TCTTCAGAAATTTG-TAAACCAGCTCTTCAAAAACTGC---TTAAACC---CATTCAGGCTCCCTGCCTCCCTGACTTGT
GTCTGTCTAAATCATCACTTATCCTTTTTGTTTCCTGAAAAGTCGAACAAGCATGCATCTTAGTAA---GTTCATGAAGA
TGGAAATATTGCTGTTTTCTGAAAAAAAA-ATACA----ATGTAACTATTTGCTTGTGTTCACTGCAGATATTTCTGTTA
TGTCAAT---TATATTATTATC----TCATCTTCCTATATGCAACTCTTGATTGGTCTGGAACCACAGGGTATTGTTGAA
TCGGCTGACAAGGTTGCCTTTATCATTGACAACGACAAATATGTGAATGGCATCGAGGGATCCATTCCAGTTTTGGTCAA
AAGTGTAAGCAATCTCTACCTTCTGCCACCAGACATCAGATCAGTTCTCTGTAATGTTCGTTAAGAGAGGGGCAGATCAT
TTCAGGGGAACTGGATCGACACCGCTGAAGAGATTGATGATTTGTTCCTAGGCGACGCAGAGGTGCACAG--CTAATCAA
TCTCTTAATAATTTCTGAAATTTCATACTCTGAGCAGCTAATGGGTTTCTGAACCTGAAACCTGTCCGTGCCCTGCCGAC
CCGGCAAAAAGAGAACCCTTTTTGACTGATAACCATTGTGTGATTGCCTGAAGGTTTGGAGGAGGCCATCAATTGGAACT
GCCGGTCCATCGGGAGGCGACTTCCCGCTGGTAACCAAGGAGGGCCATCACATACTTGATGTTATCTTCACAACCCCAAT
CCAGGATCTTGGTATGTGCGTAAATGGAAGCCTGTTACCTCTCGGAGGATCTAAATTCGACATAATAAATCAGCAACTAT
TTCTCCAGTGGAGTTTTTAGCTGGTTCCT-TTGGTCACCGTGCAGGAAAGGTAGCAGAAGACTTGGAGAAAATCGTTGGC
GTTGTGGACCATGGGATAATTTGCAACACTATGTAAGTTTCTCAACCTAAGCAATTTCTATAACAAAAATCCAGTTTTTA
ACCAGCATGCTTCAAAAACAAACG--------AATAAAAAGGTATTAGACCACAAAGCAAACAACGCGTATGCAGCTACA
CGCTGCAGTGTCTAAGATATTACAATCTGTTACATGCAGGCCGTATGCCGTAATTGCGTCGAAAGGGGAAGTTCAGGTCT
TGGATCGGAAGTCATCGGTGATACCGAACACATAA---------------------------------------------
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>chr5A_1_TraesCS5A01G417000
TCCTTGCTCACCTCTCATAACAGCGGTTTCTAGGGTCCCATGATGTTGTTGACCATGTGGCAGTGGCAGTAATGGCTAAG
ATATAAGGCACGCTTGACTTTAAGAGTACAACACAAAGACATACAAGTATCAATTGCTAAAGATTTGCGAGCACACACTT
TA------------------------------------------------------------------------------
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--------------------------------------------------------------------TTTTAGCACACA
CCTCTACAGATGTATTTTAGTGA--------AGAAATTTTGCAAGATGATGGGAAACTTGTTGATGTTCATCCAAAAAAA
AATCAGATGTCTTTCAATTTAGTTATGCTTGCAATTTTTTGGAATTA--TGTTCATGCAGGTGCATTTGTGCTTGAGATT
AGAATAATACTTTCGCTCAATAACACCTA---ATTAACACGTGACGTATTTTTACTGTCATCTCTTGAAACTGAGGCGGG
CTATAATGGTGATATCTTAATCGATACCATGCACTCAGGAATAGCAAACACGCTGATGTGACAAAGAATTAAACAAGAGA
GATGGTTAGAGTAATATAAGTAGATATCATATCATAGTAAATGATATGCTACTTTATATCATGCATGGTCATAAATAAAA
TTATCTATTATACCATTCTATGTGTATCATACACGATACTAGTATATGATACTCCTCATAATGAGTAGTCTGAGTAGCCT
CTAGTAACAAAAGTACCCCCTCTGTCTCATAATGTAAGACGTTTTTTGACACTAATGTAATATTAAGAAATGTAAGACGG
AGGGGTATCATTTATACCATGATGGAAATCTTAATAAAAAGATATAGTAATTTCACAATTTC-TTGGAGTGGGCAGAGCA
GAGAAAAACATGGGTTCCCAAGTCCCAACACATCTTATTTCACTTGGAA-TTGTCGCGCCGCTCGTGCGCTGTCACACTC
CTTATCCTCTGAAGCGGTGGTGCTTACCCAAACTGTGTGGCAGGTCTCGAAACCGCTACGCTACACCGGCAAAGCTGACG
CTAGAGCAGAGAGGCAGCCCCCGTGTTCGCCGCTCGTCTCCATGGAGGCAGTCGCCAGAGCAAGCATCGCGGCAGGCTCG
CACGCACGGGTCCCCCTGTGCCGGCGACCGCGGCCGC------GCCACGCCGTGCGCTGTCTCCGGGGACGACCCTCGGT
GGCCTGCGCGGCCGCCGCCGACGCCGATGTCGTCCGTCTCTTCGACGCCGCCAAGCTCACGGTAATAAGGGAGA-CG---
-----CTCTGCCGTCCTCCAGCATTCACGGCGGCTTCCTTCGAATGCTGAGGCACTTATCTCGTA--TTATGCGGCATTG
TTTCAGGTGGACGAGTTTGTGAAGAGCGGGATGGTGGTCGGGCTCGGCTCCGGCGCCGCGTCCGGGCTCGCCGTCCAATA
CCTCGGCACGCGCCTCCGGCGAGGCTCGCTGACCGGCATTGTTGGCATACCCTCGTAAGCATTCCAATTGCTTCACTGCC
ACTCCGTGGTTCATCTGTGCCACATGAGCTTTACTTGCATCCTGCACAACCGCAATCCCGCATGCATTCGCTCGCTCCTG
ATCATCGGTTGCGTCTAATCGGTTGTTGGGGTTGATCAGCCAGGTCTGTGATCTGTGCAAGTGAGGCGGAGAAAGCCGGG
ATCAAGGTCGGCAGCCACGAGGAAGGCACCCAAGTACGCTCTATTCTCTTGTCACCATTGTAAA-TCTTGCAGGCAAGAA
AGAAGAGGATTTTGGCTGAAACCATGCTCACTGACGTATAGATTGATTTTGCTTTCGCTGATGCTGATGTAATTGAAGAG
GGCACACTCGCTGCTGTCATCGGGCGCGGGAAAACCGAAAGCGGACAGCCTTCTTTCATACAAGAGAAGGTTAGCGCAAC
TCTTCAGAAATTTG-TAAACCAGCTCTTCAAAAACTGC---TTAAACC---CATTCAGGCTCCCTGCCTCCCTGACTTGT
GTCTGTCTAAATCATCACTTATCCTTTTTGTTTCCTGAAAAGTCGAACAAGCATGCATCTTAGTAA---GTTCATGAAGA
TGGAAATATTGCTGTTTTCTGAAAAAAAA-ATACA----ATGTAACTATTTGCTTGTGTTCACTGCAGATATTTCTGTTA
TGTCAAT---TATATTATTATC----TCATCTTCCTATATGCAACTCTTGATTGGTCTGGAACCACAGGGTATTGTTGAA
TCGGCTGACAAGGTTGCCTTTATCATTGACAACGACAAATATGTGAATGGCATCGAGGGATCCATTCCAGTTTTGGTCAA
AAGTGTAAGCAATCTCTACCTTCTGCCACCAGACATCAGATCAGTTCTCTGTAATGTTCGTTAAGAGAGGGGCAGATCAT
TTCAGGGGAACTGGATCGACACCGCTGAAGAGATTGATGATTTGTTCCTAGGCGACGCAGAGGTGCACAG--CTAATCAA
TCTCTTAATAATTTCTGAAATTTCATACTCTGAGCAGCTAATGGGTTTCTGAACCTGAAACCTGTCCGTGCCCTGCCGAC
CCGGCAAAAAGAGAACCCTTTTTGACTGATAACCATTGTGTGATTGCCTGAAGGTTTGGAGGAGGCCATCAATTGGAACT
GCCGGTCCATCGGGAGGCGACTTCCCGCTGGTAACCAAGGAGGGCCATCACATACTTGATGTTATCTTCACAACCCCAAT
CCAGGATCTTGGTATGTGCGTAAATGGAAGCCTGTTACCTCTCGGAGGATCTAAATTCGACATAATAAATCAGCAACTAT
TTCTCCAGTGGAGTTTTTAGCTGGTTCCT-TTGGTCACCGTGCAGGAAAGGTAGCAGAAGACTTGGAGAAAATCGTTGGC
GTTGTGGACCATGGGATAATTTGCAACACTATGTAAGTTTCTCAACCTAAGCAATTTCTATAACAAAAATCCAGTTTTTA
ACCAGCATGCTTCAAAAACAAACG--------AATAAAAAGGTATTAGACCACAAAGCAAACAACGCGTATGCAGCTACA
CGCTGCAGTGTCTAAGATATTACAATCTGTTACATGCAGGCCGTATGCCGTAATTGCGTCGAAAGGGGAAGTTCAGGTCT
TGGATCGGAAGTCATCGGTGATACCGAACACATAAATCTACAATTGAGTTGCAGAGCAACCATTTCCCCCGCATTTCGAC
GGGAGAATCTATTGCGAGTTGGCTGGTGAAAAAAAAATGCAATGAGTCAAA-CGTGCGATAGCTATTTTTTGTACCGTCC
GACGT--------GTAAAATTCTGTGTGGCATGTCCAAA-------GTTTTCCCCTACGGATGTATGAATATGATCTTCA
GATATGTGCAGCTACTGACTCTGCTAGCACTCTGAAGAATCTGAATCACTTGTTTATATAAGTTGGTCATGTGATG----
----------GCATCTGCCAGTT-----------------------------------------------CGGCCTGAGG
CATCTTTTGCAGCT---AAACCTCTACGCTTTCACTGTTCACTAGTACTGTGAGTTGCGTATTGCAATGGACCATCTCTG
ACCCAGCCGTGCACACAAAGGAATGCATGGCTGCGATCAACCATGGCTAACTAAGCCAGGGGACTTAAAC----TTGGAA
CCCACGCTTAGTCCTATTAGGTTATTATTATACTTATATCACAGCTCAGAGGCTAACTAAGCCTGGGGACTGAAAACAAT
TAAACAAAAGTGACCAGCGAAGAGACCAAACGCGTTCCACTTCCACCTAAGTTTCAACTCTTCTA--------------G
AAAAAAATCTACTCAGGTTTCAA-CTAACGTTGTGCTACCGGTCAACGGTCCGTAGGACCCGGTCGGTTCAGACGAGGTC
ACCACCGGCGCACCGACGCCTTCCGCGACCAGCCAA---GATGCGATACCTTGCGTACTGCTGCTGCTGAT---ACTAAT
ACACCCTGGACGGCTCTATTCTGTTCCCACCCAAGTACT---TGGAGCAGGGGAAAGCTAGAGGAGAGGAGAAGGGAGCA
GGCATGGCGTCGGAGATGCTGCTCAGGAGGATCCATTCCATCTGCCGTCTCGCCCCCGGCGACCGCCAGTCGCAGCTGTT
CGGACGCGGGGAGGGGCTCCGCCGTCTGGTTCCTACGGCGAGCCATCCATCGTTCTGCAGCAGCGTGTGTGAGCAAGCCG
GCGCGGGCAGCGCAAGCAAGGTT
>chr5D_20
ACAGT-------------------GGTTTCTAGGGTTCGTTGATGTTGTCGCCCATGTGGCAGCAGCAATAATGGCTAAG
ATGTAAGGCACGCTTGACTTGAAGAGTACAACACAAAGACATACAAGTACTAATTGCTAAAGATTCCGCAAACAAAAAAA
AAACTACTCAATAACGGACATGGATAATCTAATCTCAAGCACAAATGCACCTGCATGAATAGTACATTACGAAAAATAGT
AAAAAAATAAAAAAAACATCTGAATATTTTTGTGGATGAACATTTTCTGACATCATGCAAATTTCACCTTGAAATGACAT
CCGAGGAGGCCTGCACATAAAAAAAACAAAATTCAAGGCTCGAAAAGACACATTTTGGAGCACACATTTTTTGGCACAAA
CCTCAATATATATATATATATATATTAGTGGAGAAATTTTGCAGGATGTTGGAGAACTTGTTGATGTTCATCC--AAAAA
AATCAGATGTCTTTTAATATATTTTTGCAAT---TTTTTTGGAATTTAGTGTCCATGCGGGTGCATTTGCGCTCGAGATT
AGAGTGACACTTTCGCTCAATAGCACCTACTAATTAACACGTGACACGTTTTTACAGTTATCTCTTGAAACTGAGGA---
--------------------------------------------------------------------------------
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----TAACAAAAGTATCA--------------------------------------------------------------
-----------TTATACCACGATGAAAATCTATAAAAAAAACAGA--TAACTTCACAATTTTTTTGGAGTGGGCAGAACA
GAGAAAAACATGGGTTCCCAAGTCCCAACACATCTTATT-CACTTGGAATTTGTCGCGCTGCTCGTGCGCTGTCACACTC
CTTATCCTCTGAAGCGCTGGTGCTTACCCAAACTGTGTGGCAGGTCTCGAAACCGCTAGGCTGCACCGGCAAAGCTGACG
CTCGAGCAGAGAGGCAGCCCCCGTATTCGCCGCTCGTCTCCATGGAGGCAGTCGCCAGAGCAAGCATCGCGGCAAGCTCG
CACGCGCGGGTCCCCCTGTGCCGGCGACCGCGGCCGCGGCAGCGCCACGCCGCTCGGTGTCTCCAGGGGCGACGTTCGGT
GGCCTGCGCGGCCGCCGCCGACGCCGATGTCGTCCGCCTCTTCGACGCCGCCAAGCTCACGGTAATAAGGGAGA-CACTT
GCTGACTCTTCCGCCCGCCGGC------------TTCGTCTGAATGCTGAGGCACTTACCTCATG--TTATGCGGCATTG
ATTCAGGTGGACGAGTTCGTGAAGAGCGGCATGGTGGTCGGGCTCGGATCCGGCGCCGCGTCGGGGCTCGCCGTCCAGTA
CCTCGGCACGCGCCTCCGGCGAGGCTCGCTGACCGGCATTGTCGGCATACCCTCGTAAGCGTTGCAATTGCTTCACTGCC
ACTCCGTGGTTCATCTGTGCCACATGAGCTTTACTTGCATCCTGAACATCTGAAATCCCTCGTGCATTCGCTCACT-CTG
ATCATCGGTTGCGTCTAATCGGTTGTTGGGGTTGATCAGCCAGGTCTGTGATCTGTGCAAGTGAGGCAGAGAAAGCAGGG
ATAAAGGTCGGCAACCACGAGGAAGGCGCCCAAGTAAGCTCTATTCTCTTGTCACCATTGTAAA-TCCTGCAGGCAGGAA
AGAAAAGAATTTTGGCTGAAACCATGCTCACTGACGTATAGATTGATTTTGCTTTCGCTGATGCTGATGTAATTGAAGAG
GGCACACTCGCTGCTGTCATCGGGCGCGGGAAAACCGAAAGCGGACAGCCTTCTTTCATACAAGAGAAGGTTAGCGCAAC
TCTTCAGAAATTTGTTAAGCCAGCTCTTCGGAAACTGC---TTAAACC---CATTCAGG--------CTCCCTGACTTGT
GTCTGTCTAAATTATCACTTGTCCT-TTTGTTTCCTGAAAAGTCGAACAAGCATGCATCTTAGTAATAAGTTCATCAAAA
TGGAACTGTCGCTGTTTTCTGAAAAAAAAAATACTCTATATATAACTATTTGCTTGTGTTCAGTGCAGATACTTCTGTTA
TGTCAATTACTATATGATTATC----TCATCTTCCTATATGCAACTCTTGATTGGTCTGGATCCACAGGGTATTGTTAAA
TCGGCTGACAAGGTTGCCTTTATCATTGACAACGACAAATATGTGAATGGCATAGAGGGTTCCATTCCAGTTTTGGTCAA
AAGTGTAAGCAATCTCTACCTTCTGCCACCAGATACCAGATCAGTTTTGTGTGATGTTCATTAAGAGAGGAGCAGATCAT
TTCAGGGAAACTGGATTGACACCGCTGAAGAGATTGATGATCTGTTCCTAGGTGACGCAGAGGTGCACACCACCCATCAA
TCTGATAATTATTTATA-----------------------CTAGACTTCTGAACCTGAAACCTGTCCGTGCCGACCCGGC
AAAAGAAAATAAAAAACC-TTTTGACTGATACC---------ATTGCCTGAAGGTTTGGAGGAGGCCATCCATTGGAACT
GCCGGTCCATCAGGAGGCGACTTTCCCCTGGTTACCAAGGAGGGCCATCACGTACTTGATGTTATCTTCACAACCCCCAT
CCAGGATCTTGGTATGTA--TAAATGGAAGCTTGCCACTCTTT-GAGGATCTAAATTCGACATGATAATTCAGTAACTAT
TTCTCCAATGGAGG-TTTAGCTGGTTTGCCTTGGTCACCTTGCAGGAAAGGTAGCGGAAGGCTTGGAGAAAATTGTTGGC
GTTGTGGAGCATGGGATAATTTGCAACACTACGTGAGTTTCTCAACCTAGACAAACTATATAGT-AAAATCTAGTTATTA
ACCAGCATGTTTCAAGAAAGAAAG--------A----AAAGCTCTTATACCAAGAAAGCAGCC---CGTGTGTGGTTACA
CAGTGCAGTGCCTAAGACATTGCAATCTGTTGCATGCAGGCCGTATGCTGTCATCGCGTCGAAAGGGGAAGTTCAGGTCT
TGGATCGGAAGTCATCGGTGATACCAAACACATAAAGCTACAATTGAGTTGCAGAGCAACCATTTCTCCTGCATTTCGAC
AGGAGAATCTGCTGCTGGTCGGCTG-------AAAAATGCAACCGAATCAACCGCGCGAAAGCTTTTTTTTT--------
-------CTGTCGGTAAAATTCTGTGTGGCATGTCCAAACTCCAAAGTTTTCCCCTCCGGATGTACGAGTATATCCACAG
ATGTGCA---------GACTCTGCAAGCACCCTGGAGAATCTAAATCACATGTTTATGTAAGTTGGCCATGTGATGAGAG
TTTTGTGAGGGCATCTTCCAGTTCCAAGAGAAGCGGCTGGCCTGGCCAGCGGGCCAAGTAAAGTATGGCCCGGCTTGAGG
CATCTTTTTTCCAGCTAAAACCTCTACGCTTTCACT-------ACTACTGTGACTTGCGTATTGCAATGGACCGTCTCTG
ACCCAGCCGTGCACACAAAGGAATGCATGGCTGCGATCAACCATGGCTAACTAAGCCTGTGGACTTAACTTGGATTGGAA
GCCACGCTTAATCCTACTGTAGATGGTCGCTACCTCGTTTTCGCCCAAGTAAGAGCCCTGATTACTTGGTCCGCGGACTG
GAAACAAAAGTGATCAGCGAAGAGGCCAAACGCGTTCCACTTCCACCTAAGTTTCAACTCTTCTAGAAAAACTTTTCTAG
AAAAAAATCTACTCAGGTTTCAAACTAACGTTGTACTACCGGTCAACGGTCCGTAGGACCCGGTCGGTTCAAACGAGGTC
ACCC-------ACCGACGCCCTCCGCGACCAGCCAAGATGATGCGATACCTTGCGTACTGGTGCTGCTGCT---ACTAGT
ACACCTTGGACGGCTCTATTCTGTTCCCACCCAAGTACT---TGGAGCAGGGGAAAGCTAGAGGAGAGGGGAA-----CA
GGCATGGCGTCGGAGATGCTGCTCAGGAGGATCCATTCCATCTGCCGTCTCGCCGGCGGCGACCGTCGGCTGCAGCTGTT
CGGCCGTGGGGAGGGGCTGCGTCGTCTGGTTTCTCCGGCGAGCCATCCATCATTCTGCAGCAGCGCGTGTGAGCAAGCCG
GCGCGGGCAGCGCAAGCAAGGTT
>chr5B_727
TATCA---------------------------------------------------------------------------
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-----------TTATATAACGATGGAAATCTATAAAAAAAACAGA--TAACTTCACAATTTC-TTGGAGTGGGCAGAACA
TAGAAAAACATGGGTTCCCAAGTCCCAACACATCTTATTTCACTTTGAATTTGTCGCGCCGCTTGTGCGCTGTCACACTC
CTTATCCTCTGAAGCGGTGGTGCTTACCCAAACTGTGTGGCCGGTCTCGAAACCGCTACGCTACACCGGCAAAGCTGACT
CTCCAGCAGGGAGGCAGACACCGTGTACGCCGCTCGTCTCCATGGAGGCAGTCGCCAGAGCAAGCATCGCGGCAAGCTCG
CACGCGCCGGTTCCCCTGTGCCGGCGCCCGCGGCCGC------ACCGCGCCGCGCGGTGTCTCGGGGGACGACGTTCGGT
GGCCTGCGCGGCCGCCGCCGACGCCGATGTCGTCCGCCTCTTCGATGCCGCCAAGCTCACGGTAATAAGGGAGAGCACTC
GCTGACGCTTCCGCCCGCCGGCATCCAACATGGCTTCCTCTGAATGCCGAGACAATTATCTCGTGTGTTATGCGGCATTG
ATTCAGGTGGACGAGTTTGTGAAGAGCGGCATGGTGGTCGGGCTCGGCTCCGGCGCCGCGTCGGGGCTCGCTGTCCAGTA
CCTCGGCACGCGCCTCCGGCGAGGCTCGCTGACCGGCATTGTCGGCATACCCTCGTAAGCGTTCCAATTGCTTCACTGCC
AATCCGTGGTTCATCTGTGCCACATGAGCTTTACTTGCATCCTGAACATCTGAAATCCCTCATGCATTCGCTCAGTTC-G
ATCATCGGTTGCGTCTAATCGGTTGTTGGGGTTGATCAGCCAGGTCTGTGATCTGTGCAAGTGAGGCGGAGAAAGCAGGG
ATAAAGGTCGGCAGCCACGAGGAAGGCGCCCAAGTAAGCTCTATTCTGCTGTCACCATTGTAAA-TCTTGCAGGCAAGAA
ATAAGAGAATTTTGGCTGAAACCATGCTCACTGACGTATAGATTGATTTTGCTTTCACTGATGCTGATGTAATTGAAGAG
GGCACACTCGCTGCTGTCATCGGGCGCGGGAAAACTGAAAGCGGGCAGCCTTCTTTCATACAAGAGAAGGTTAGCACAAC
TCTTCAGAAACTTGTTAAGCCAGCTCTTCAGAAACCAATTATTAACCATTTCATTCAGG--------CTGCCTGACTCGT
G----TCTAAATCGTCATGTGTCCA-TTTGTTTCCTGAAAAAATGAAAAAGTATGCAGCATAGTAA---GTTCATCAAAA
TGGAATTAGCGTTGTTCTGAT-AAAAATAAATGTG----ATGTAATTATTTGCTTCCATTCACTTCGGATACTTTCGTTG
TGCCAGT---TATATGGTTATC----TCATCTTCCTATACGCAACTCTTGATTGGTCTGGATCCCCAGGGTATTGTTGAA
TCGGCTGACAAGGTTGCTTTTATCATTGACAACGACAAATATGTGAATGGCATCGAGGGATCCATTCCAGTTTTGGTCAA
AAGTGTAAGCAATCTCTACCTCCTGCCACCATAGATCAGATCAGTTCTATGTAATGTTCGTTAAGAGAGGGGCAGATCAT
TTCAGGGAAACTGGATCGACACCGCTGAAGAGATTGATGATTTGTTCCTAGGCGATGCAGAGGTGCACAG--CTTATCAA
TCTCTTAATAATTTCTAAAATTTCATACTCTGAGCAGCTAATGGATTTCTGAACCTGAAACCTGTCCGTGCCCCGCCGAC
CCGGCAAAAAGAGAACCC-TTTTGACTGATAAACATGGTGTGATTGCCTGAAGGTTTGGAGGAGGCCATCAATTGGAACT
GCCGGTCCATCAGGAGGCGACTTCCCACTGGTAACCAAAGAGGGCCATCACATACTTGATGTTATCTTCACAACCCCAAT
CCAGGATCTTGGTATGTGTGTAAATGGAAGCCTGTTACCCCTCGGAGGATCTAAATTCAACATGATAAATCAGAAACTAT
TTCTCCAGTGGAGTTTTTAGCTGGTTCCT-TTGGTCACCGTGCAGGAAAGGTAGCAGAAGGCTTGGAGAAAATCGTTGGC
GTTGTGGACCATGGGATAATTTGCAACACTACGTAAGTTTCTCAACCTAAGTAATTTCTATAAC-AAAATCCAGTTTTTG
ACCAGCATGCTTCAAAAACAAACAAACAAACAAACAAAAAGCTATTAGACCACAAAGCAAACAACTCATATGGAGCTACA
CGCTGCAGTGTCTAAGATATTACAATCTGTTACATGCAGGCCGTATGCCGTAATTGCGTCGAAAGGGGAAGTTCAGGTCT
TGGATCGGAAGTCATCGGTGATACCAAACACATAAATCTACAATTGAGTTGCAGAGCAACCATTTC-----------GAC
CGGAGAATCTATTGCGAGTTGGCTGGAG-AAAAAAAATGCAATGAGTCAAATCGTGCGATAGCTATTTTTTGTGCCGTCC
GACGTCGCTGTCGGTAAAATTCTGTGTGGCATGTCCAAG-------GTTTTCCCCTAGGGATGTATGAATATGATCTCCA
GATGTGTGCAGCTACTGACTCTGCTAGCACTCTGAAGAATCTGAATCACATGTTTATATAAGTTGGCCATGTGATG----
----------GCATCTTTTC------------------------------------------------------------
---------CAGCT---GAACCTCTACGCTTTCACTGTTCACTACTGCTGTGCGTTGCGTATTGCAATGGACCATCTCTG
ACCCAGCCGTGCACACAAAGGAGTGCATGGCTGCGATCAACCATGGCTAACTAAGCCTGGGGACTTAAAC----TTGGAA
CCCACGCTTAGTCCTATTAGGTTATTATTA----TATATCGCAGCTCAGAGGCTAACTAAGCCTGGGGACTGAAAACAAT
TAAACAAAAGTGACCAGCGAAGAGACCAAACGCGTTCCACTTCCACCAAAATTTCAACTCTTCTAGA-------------
AAAAAAATCTACTCAGGTTTCAA-CTAACCTTGTACTACCGGTCAACGGTCCATACGACCCGGTCGGTTCAAACGAGGTC
ACCA-------ACTGACGCCCTCCGCGACCAGCCAAGATGATGCGATACCTTGCGTACTGCTGCTGCTGCTGCTACTAAT
ACACCCTGGACGGCTCTATTCTGTTCCCACCCAAGTACTCCTTGGAGCAGGGGAAAGCTAGAAGAGAAAGGAA-----CA
AGCATGGCGTCGGAGATGCTGCTCAGGAGGATCCATTCCATCTGCCGTCTCGCAGGAGGCGACCGCCGGCCGCAGCTGTT
CAGCCGCGGGGAGGGGCTCCGCCGTCCGGTTTCTCCGGCGAGCCATCCATCATTCTGCAGCGTCGCGTGTGAGCAAGCCG
GCGCGGGCAGCGCAAGCAAGGTT
>chr7D_1549
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----------------------------------------------TGTGATCTTTGCAAGTGAGGCAGAGAAAGCAGGG
ACAAAAGTCGGCAACCACAAGGAAGGCGCCCAAGTACGCTCTATTTTGTTGTCACCATTGTAAAATCTTAAACGCAAGAG
ATAAGAGAATTTTGGCTGAAACCAAGCTCACTGACGTATAGATTAATTTTGCTTTCATTGATGCTGATGTAATTGAAGAG
GGCACATTGGCTGCAGGCATCGGGTGCCGGAAAATCGAAAGCAGAGAGCCTTCTTTCATGCAAGAGAAGGTTAGCACAAC
T-TTCAGAAACTTGATATGCCAGCTCTTTGTAACCCAG---TTAACCCTTTCATTCAGG--------CTCCCTAACTTGT
GTCTCTCTAAATCATCATTTGTGCA-TTTGTTTCCTGCAAAATCGATTAAACATGCAGCATAGTAA---GTTCGTCAAAA
TGGAGCTGTCGCTGTTTTCTGAAAAAATAAATATG----ATGTAACTATTGGCTTGAGTTTGCTTCAGATACTTTTGTAA
TGTCAAT---TATATGATTGCCTCGATCATCTTCCTAGGTGCAACTCTTGATTGGTCTGGATCCATATGGTATTGTTAAA
TCGGCTGGCAAGGTTGCCTTTATCATTGACAATGACAAATATGTGAATGGCATCGAATGTTCCATTCCAGTTTTGATCAA
AAGTGTAAGCAATCTCTATCTTCTGGCACCAGAGACTAGATCTATTTTCTGTAATGTTCATTAAGAGAAGAGTAGATTAT
TTCAGGGAAACTGGATCGGCACTGCTCAAGAAATTGATGAGTTGTTCCTAGGCGACGCAGAAGTGTGCAG--CTCATCAA
TCTTTTAATAACTTCTAAAATTTCCTTCTCTTAGCAGCTACTAGATTTCTGAATATGAACATTAAATTGCACTTCCCGAC
CCCAGAAAATTAAAACCAGTCCGTTGATCTCGTTACGTGATA----CCTGAAAGTTTGAAGGAGGCCCTCCATT-GAACA
GCTGGTCCATCGGGAGGCGACTTCCCATTGG---CCAAGGAGGGCCATCGCATGCTTGATGTCATCTTCACAACCCCCAT
CCAGGATCTTGGTATGCGTGTAAATGGAACCCTGTTACTTCTCA-AGGATCTAAATTTGACATGATAATTCAGTAACTAT
TTCTCCAATGGAGG-TTTAGCTGGTTTGCCTTCGTCACC-----------------------------------------
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>SNPs
--SS-SSSSSSSSSSSSSSSSSSS------------S-SS---------S-S-----------SS---S-----------
--S-----------------S----------------------------SS--------------SSSS-SSSS-S-SSS
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-----S-
----S-S-S--S---S-SSS-SS--------------------S----S---SS-------------------SS-----
--------------S---S--S--S---SSSSSS------------S-----S-----S----------S---S------
---S-S-S--------------S----------------------SSS-------S--S-----------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS--------S-----------SS-S-----SSSSSSS---S--------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------S-----
-----S----------------------------------------------S---S----------------SS-----
------------------------------------S---------------------------------------S---
---------S---S--S--S----S--SSSS--------SS-----------------------S---------------
S----------------------------S--------------------------------S--------------S--
------------------------------------------S-----------------S-------------------
--------------------------------------------S---S-S-S------S-------------S--S---
----------------------------------------------------------------------------S---
--S------------------------S----------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-----------S----------------------------SSSSSSSS-------------
--------------------S----S-------------------------------------------------S--S-
-----S---S------------------------S------------------------------------S--------
---------------S---------------------------------------------S------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-------S------------------------------------------------------------------S-----
----------------S---------------------------S-----------------------------------
------------------S-----------------S-------------------------------------------
--------------------------S-----------------------------------------------------
------------------S--------------------------------------------S---------S------
------------------------------------------------------------S-------------------
-------------------------------S--------------------------------S---------------
----------------------------------S------S-----------------------S------S-------
--------------------------------------------------------------------------------
-------------------------S----------------------------------------S--S----------
S-------------------------S-S--------------------------------------------S------
-----------------------------------------------------------------------------S--
---S---------------------------------------------S----------------S-------------
----------------S---------------------------------------------------------S-----
--------S-----------------------------------S-----------------------------------
---------------------------------------------------------S----------------------
---------------------------------S------S---------------------------------------
--------------------------------------------------------------------------------
----------------------------------S------------------------------------S--------
----SSSSSSS---------S------------------------------------------------S----------
---------------------------------------------------------------------S---SSSSS--
------------------------------------------------------SS-----------S-S----------
---S---------------------------S--S----------------S-------------S--------------
-----------------------
>forward_643
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---------------------------------------------------------------CTTGAAACTGAGGCGGG
CTA-----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>reverse_1757
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CCTG
ATCATCGGTTGCGTCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>forward_703
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GCAAACACGCTGATGTGACA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>reverse_2144
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTGCCTCCCTGACTTGT
GTC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>forward_1550
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ACGAGTTTGTGAAGAGCGGG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>reverse_3350
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CGCATTTCGAC
GGGAGAATC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
