>input_sequence_39203
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---------------------------------------------------------------------ATGGCGTGCGT
AGGGGAGGAGGAGT---------TGAGTTGGGAGGACCTCTTCTTTGACGAGGCGAAGATGCTGGCCGCGGCGCAGAAGG
AGGA----------------------------------------------------------------------------
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-------------------------------------------------------------------GGAGAAGAAGGCG
CGGCAGGAAGAGGAGAAGGCGCGGCAGGAAGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGCCTAGATCA
CAAGCGGGTCATGGCATCCATCGTCGAGTACGACCCCAAGACGAAGCGCAAGGTCCGCACCCGCTACTCCTTCAACGACT
TCTCCGTCTTCGACATCAACGCCGAGTGTAAGTCCGTCCGCCATGATCAAAACCTAGATCCCGACCTGATTCTATTTCAA
AGGCATACATTTCCAATTGTGTATGTATTAATTGTATTTATGTATGTTTCTTTCAAGTTGTTTTCACGATTGCTAGCCTC
GTTGGTGGAATCTCCCTTGCATATATATCTAGTTATGTTTACAACAATTGCACAATGTTCAGTCCCATATTTCACAATTC
ACAACAATTGCACATGATGTGTTGTTGATTACTGCTCATTTATTGGCTCAATGTTTAAAATGAATGAATACACTACTCCA
TCCGATCCAAATTAATTGACGCGGTATCTATACAACCTCTATACAATGTTCTATACAGGCTGTGCCAATTAATTTGGATC
GGAGGGAGTAATAAGAGTAG-ATAGATTCCTTTCTAT-AGAC--CCAAAGATATT---------TGCATCTCTTCTCTTT
TTGCATATCCTTTCTTGTTATGCTTGCTGACTCAAAGCCTGATTAATTGTAAAATTTAACAGAAAATTGTTTCATTCTTT
CCACGTCTTGTTATTTATCTGTCTCGTCTT-GTTTGCATCAACTATGTATGCTATTGTTGTTGAGTGATTTGATTTG---
TACT---GT-----TTAAGTGAAACAAGAATAGTTTGCTGTGTCGAG----AGGCAAACATGATTTGAAAACTGAATTTC
TTGCAGTATGAATAAGAATAGGAAATCTGAATTGTATCCTTGTCGTGCTGCTGCGGTGCATTTTTTGCTTTACATAATTC
TTTTTGCCCCTCACAACTAGCTTGTGCTTTTG----TTTTTCCATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTCTGTACATGGTTTGATACTCCAAGACACTGCAAACATACTTACTGTCAAGATAGTATCCTCGGATAAAGGCTTCCCA
ATCAATGTGTATGGCACTATCATCGCTAGAGACAGCATCGACCACAAGTGCATGTACCTCTTTAACCGCACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGCCTTTGCTTCAAAACCACTGCTTATGTGC----CTCTTGATTTTATTTA
TTTTGTAACTCTATTGCATATTCCGTTGGAGGCTTTATTGATATTTGGATTATCATAATCTAATCTTTTGAGCTATTGCT
TTTCACAGGATGAAAATCTGATCTTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATTGAT
CTTAAAATCAAGGTTGGCGAAGAGCCTCTAGACGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTTCC
TAGAGACGAAAAGGTTGCTGTTGGACAGCAAACTCTTGAGAGCTGGTTTAGTATTGTGGACGTGAGGTATGCAACTCTTC
TTCATGCTGTCGAGGGTACCTTCGAGATCAAGTTACTCGAGGGACGTTTCTGTGGAAAGATTAAGGCTGGCATCGAGGGC
ATTCAACCTAGGATTGTGGTTTATAATAGCAAGGAAGACGGTGTGGTGCCTTCTGAAGGCCGTACAGATATCACACTCCG
GCGACGTGTCATGACCCTCCGTCTGGATGGTATGCTCACACTTGGCTTTGCAGTCCGTGGTCTTGGTGGTGCTGCTGCTA
CTAGACAATGGAAAGTTGAATTCACACCACGACACCGTGGTGAAGATAAAAAGGAGATTTCTTGTGGTATTGCCAGGCTT
CAAGTGAAGGTCTTCTGGTCCATGCTGGACTATAGGC-------CGTA-A------------------------------
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------
>chr1D_1_TraesCS1D01G023600
AACGAACTCATCACACATTAAGCAATGAAATCCCTTTTAACCTCG----------AAAAAAAAACTGCTCCAGCAGAATC
TGCTAGGAGACTAACTACAAGAAAACTAGGAATAGA-TCCAACCAGCCTTTTGTCACGTCGAGGGTGC--TAGCCTGTTT
AGCACACAAATGTGCCATGAAGTTTGCTGATCGGAAAACGTGCTGAATAGAAAAAGAACTGAAACCGGAGC---------
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--------------------------------------------ATGCCTGAATATGGTTTACACCAAGCGGCCATGAAA
CTGGAGCAGGACCT------------------------------------------------------------------
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--------------------------------TTTTTTTCGAGGGACCTAGCGGTGAATACTTTGTTAATCCAGTGTACA
CAAAACCTTTTCCACCCAATTTTGTGAACGGTTACATGGCAATTGTTCTTTTCTTTTCTTCCGGATTTTTT---------
--CTTGC--TTTTTTGTGAAAATCGAGGACATGTTTTTCATGTTCATTTAAAAAATCATGAATATTCTTTTGAAATTTCT
AGAACATTCATAATAGCTTAGCATTATTTTTCATATTTCTAAACATTTTTAAAATT------------------TACGAA
CA-------------------TTTTTTTATAAAACCTGACGGAACTAAAAACCGGCTGATGTAAAATATCGGCCAGAAAC
TAAAAGCCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNN----------AGCCGTGTGATCCAATTTCTCCGGTCCCACCCGTCAATCTCGGGGGCCAGAGGGGGGGGGG
GGGTTGTGTGTCAAATTATCAAATGGAGAAGGAAAGTGTGGCTTATATGATCCAATTTCTCTTCTCCTGCCGAACGGAGC
GCACTATAGCTTAATGGGCCGTCTTTCGCGTAAAGATTAATAAGGCCCAGCCCGAAGCAGCAGTGGCGATTA--------
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------------------------------------GG-AAGGAATAAAAAGGAGGAATCGGGCAGGCCTCGACCGTGGA
CGGCGACTTAGGGTTAGCTTCATCGGCCTTGGCGGCGACGGCGACGGCGACGGCGGGGAATTGGGATTCATGGCGTGCGT
AGGGGAGGAGGAGT---------TGAGTTGGGAGGACCTCTTCTTTGACGAGGCGAAGATGCTGGCCGCGGCGCAGAAGG
AGGA----------------------------------------------------------------------------
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-------------------------------------------------------------------GGAGAAGAAGGCG
CGGCAGGAAGAGGAGAAGGCGCGGCAGGAAGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGCCTAGATCA
CAAGCGGGTCATGGCATCCATCGTCGAGTACGACCCCAAGACGAAGCGCAAGGTCCGCACCCGCTACTCCTTCAACGACT
TCTCCGTCTTCGACATCAACGCCGAGTGTAAGTCCGTCCGCCATGATCAAAACCTAGATCCCGACCTGATTCTATTTCAA
AGGCATACATTTCCAATTGTGTATGTATTAATTGTATTTATGTATGTTTCTTTCAAGTTGTTTTCACGATTGCTAGCCTC
GTTGGTGGAATCTCCCTTGCATATATATCTAGTTATGTTTACAACAATTGCACAATGTTCAGTCCCATATTTCACAATTC
ACAACAATTGCACATGATGTGTTGTTGATTACTGCTCATTTATTGGCTCAATGTTTAAAATGAATGAATACACTACTCCA
TCCGATCCAAATTAATTGACGCGGTATCTATACAACCTCTATACAATGTTCTATACAGGCTGTGCCAATTAATTTGGATC
GGAGGGAGTAATAAGAGTAG-ATAGATTCCTTTCTAT-AGAC--CCAAAGATATT---------TGCATCTCTTCTCTTT
TTGCATATCCTTTCTTGTTATGCTTGCTGACTCAAAGCCTGATTAATTGTAAAATTTAACAGAAAATTGTTTCATTCTTT
CCACGTCTTGTTATTTATCTGTCTCGTCTT-GTTTGCATCAACTATGTATGCTATTGTTGTTGAGTGATTTGATTTG---
TACT---GT-----TTAAGTGAAACAAGAATAGTTTGCTGTGTCGAG----AGGCAAACATGATTTGAAAACTGAATTTC
TTGCAGTATGAATAAGAATAGGAAATCTGAATTGTATCCTTGTCGTGCTGCTGCGGTGCATTTTTTGCTTTACATAATTC
TTTTTGCCCCTCACAACTAGCTTGTGCTTTTG----TTTTTCCATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTCTGTACATGGTTTGATACTCCAAGACACTGCAAACATACTTACTGTCAAGATAGTATCCTCGGATAAAGGCTTCCCA
ATCAATGTGTATGGCACTATCATCGCTAGAGACAGCATCGACCACAAGTGCATGTACCTCTTTAACCGCACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGCCTTTGCTTCAAAACCACTGCTTATGTGC----CTCTTGATTTTATTTA
TTTTGTAACTCTATTGCATATTCCGTTGGAGGCTTTATTGATATTTGGATTATCATAATCTAATCTTTTGAGCTATTGCT
TTTCACAGGATGAAAATCTGATCTTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATTGAT
CTTAAAATCAAGGTTGGCGAAGAGCCTCTAGACGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTTCC
TAGAGACGAAAAGGTTGCTGTTGGACAGCAAACTCTTGAGAGCTGGTTTAGTATTGTGGACGTGAGGTATGCAACTCTTC
TTCATGCTGTCGAGGGTACCTTCGAGATCAAGTTACTCGAGGGACGTTTCTGTGGAAAGATTAAGGCTGGCATCGAGGGC
ATTCAACCTAGGATTGTGGTTTATAATAGCAAGGAAGACGGTGTGGTGCCTTCTGAAGGCCGTACAGATATCACACTCCG
GCGACGTGTCATGACCCTCCGTCTGGATGGTATGCTCACACTTGGCTTTGCAGTCCGTGGTCTTGGTGGTGCTGCTGCTA
CTAGACAATGGAAAGTTGAATTCACACCACGACACCGTGGTGAAGATAAAAAGGAGATTTCTTGTGGTATTGCCAGGCTT
CAAGTGAAGGTCTTCTGGTCCATGCTGGACTATAGGCCGTAAATCGTA-ATCCTGTGGTAACATGACAAGCAAAGTTGCG
GGTGTAATGAAGTGAGGGTTGTGTTATCATGCTTCAAA-TGATGTAATGGATCAAGTAATGTTTG--TAGCGAACTAAGT
TATATATTTATATTGTCGTGGGGTAGTGTATTGAATTGGTTGCTTCTGCCTTTTGGCAATACTGGATGGAAGCACTTGTG
TTTGAAGTATATTATGCAGAAATCTGAACGTTTCTATTTTCTGTTATCTACTACTAGTATGTCATTGTCTGACAGAAATT
GGTAGATGTATATATACATCGCATGGCTGAAGGCCATCATTCATGTGGAACTTGTGAAGAATGCCAGGTCAGATGTGTCA
TTGCTTCTAACTGGAAATAATGTCTTGTGGTCTGACATTAAACAGATCTGGTGGCAGGTACAGGTACACTGGAGGGGATA
AAAAAGATCTCTCAACAGATCTCTTTGATTCTCAACTCTCCTTTGCAGCTGACTGGGGGGCGAAAAACATGGTGGAGGTG
TTTCTGATCCCCATGCATTTACCTCTATTGTGCTGCCGAAAAGCACTAGAGAGAATCATATAAGCAGCCTTGGGAAATCT
TGAAAAGCTCAGGTGGCGCCACGAAACAATTTGTTTTTTTTTTTTGTGTGTGTGTGATTGTACTGCTCACCGGGTGCATC
TAAGCTCAGGTTCTGGATTGAATTATCTGGTGAGGCATACATTTCCTGGAATGAAAGAAAATCAACAAAGACTAATCAAT
GGACTTGAGCGGCACTCGATCTTGGTTTTCTTGAGCGGCAACTGGCTTTGGTCAGTTTGGGAGCTCCAAAGGTGAGATCA
GGCCGAGGGTGGAGACTTTTACTCTGTAGGGCATGTAGGTGAGATCATGGTGCATAGCGCACCTGCGCAGCTGCCTCAGA
GAGGCCAGGGTTGATCATTCATTGCTACCTGGATAAAAACCATTCGCCCCATAATCTGGCGAGACGGGGTTGATAGCTTC
CGAAAG
>chr1D_1
AACGAACTCATCACACATTAAGCAATGAAATCCCTTTTAAGCCCGAAAA-------------------------------
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--------------------------------------------------------------AAAATCTCTAAAAAGACA
AATATTTACGAACGGAGGGAGTAGACGCCAGTATTGACCGACACATATTCTAGAGATTAACAATCTTCAAGCAGTATGTT
TCCATCACAACTTTCACATAACCCCTTAGAGCATCATCAATAGATGATGCAAATTTGAAGATGTGAAACGGTAGATGTAA
AAATTTACATCTCCAAAAATTGCATTTTATATCTTAAAAAAAAGGCAACTCCGACCGATGATGTAAATTGGTGAGGTAAA
AGTGTAACTCCAATAGACGATGCAAATGAAGATGTAAAACTAGTCAGCATGAGCGCTAGCGGACCGAACGGCGGAAGGAG
GTGCATCGGCTGCCGAGCGAGGAGAGCCGGGAGGTCGAATGCAGCGGCGAGAGCTCGAATGGTCGGTTGCGCGGTTGTGA
ATTGAGCGGCGAATTTGCCACGGTAGGACGGAAGGGCGACGGCCGTGCGCCGTGAGAAAGTCGAGTCTGGCGGGGGAAAG
CAGCGGTGGCGGGTGTGCCGCTCAAATCCGCTGGCGGCGGTATG------------------------------------
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----------------------------GGGGGGGCTCAAATCATACGACGACGAAGAAGCGGCCAATTCGGCCGATTTG
GAGGCGCGCGGCGGTGGAGCAGCCGCGGAACTGGAGGCGGGGGCGATGGAGCGGCTAGATCTGGCAGTGGGGCGGCAACC
ACGATGGCGACAGGACGGAGTGGGGCAAAACTGAGGCGGCAGTGTGGAGGCGGATGCGGGATCGGGGACAGTGGTCGCGC
CGTCGAAGACCCCGACGGGGTGGGTGGCTGTGGCGGAGGAGGCGGAGGGGTCTTCAGAGTTGGCCATGGCCCGGGCGGCG
TTCGGCGGGCGACTGGCGGGCGGGCGAAGGAAAATAAAAGCGGTTACGCAGTTGGCGCGCGGCCGTCAGTTTTACATCTT
GTGGAGGTGGATGTTGTATTTTACATCTCCTGGAGATGGACATGTAAATTTACATTTACATCATACGTTGAAGAGGGGCT
TTGAAATTTTGAAGATGAAAAACTAATTATTTTTGCATCTACATCATCTATTGAACATGTTCTTAGCTTTGCAAATATAA
CCCCATCGCGCGATGCAACAGCCTCAGAGATTAGGGGATCAGTAATGCCTGAATATGGTTTACACCAAGCGGCCATGAAA
CCGGAGCAGAACCT------------------------------------------------------------------
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--------------------------------TTTTTTTCAAGGGACCTAGCGGTGAATACTTTGTTAATCCAGTGTACA
CAAAACCTTTTCCACCCAATTTTGTGAACGGTTACATGGCAATTGTTCTTTTCTTTTCTTTCGGATTTTTT---------
--CTTGCTTTTTT-TGTGAAAATCGAGGACATGTTTTTCATGTTCATTTAAAAAATCATGAATATTCTTTTGAAATTTCT
AGAACATTCATAATAGCTTAGCATTATTTTTCATATTTCTAAACATTTTTAAAATT------------------TATGAA
CA-------------------TTTTTTTCTAAAACCTGACGGAACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAGCCGTGTGATCCAATTTCTCCGGTCCCACCCGTCAATCTCGGGGGCCAGAGGGGGGGGGG
GGGTTGTGTGTCAAATTATCAAATGGAGAAGGAAAGTGTGGCTTATATGATCCAATTTCTCTTCTCCTGCCGAACGGAGC
GCACTATAGCTTAATGGGCCGTCTTTCGCGTAAAGATTAATAAGGCCCAGCCCGAAGCAGCAGTGGCGATTA--------
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------------------------------------GG-AAGGAATAAAAAGGAGGAATCGGGCAGGCCTCGACCGTGGA
CGGCGACTTAGGGTTAGCTTCATCGGCCTTGGCGGCGACGGCGACGGCGACGGCGGGGAATTGGGATTCATGGCGTGCGT
AGGGGAGGAGGAGT---------TGAGTTGGGAGGACCTCTTCTTTGACGAGGCGAAGATGCTGGCCGCGGCGCAGAAGG
AGGA----------------------------------------------------------------------------
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-------------------------------------------------------------------GGAGAAGAAGGCG
CGGCAGGAAGAGGAGAAGGCGCGGCAGGAAGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGCCTAGATCA
CAAGCGGGTCATGGCATCCATCGTCGAGTACGACCCCAAGACGAAGCGCAAGGTCCGCACCCGCTACTCCTTCAACGACT
TCTCCGTCTTCGACATCAACGCCGAGTGTAAGTCCGTCCGCCATGATCAAAACCTAGATCCCGACCTGATTCTATTTCAA
AGGCATACATTTCCAATTGTGTATGTATTAATTGTATTTATGTATGTTTCTTTCAAGTTGTTTTCACGATTGCTAGCCTC
GTTGGTGGAATCTCCCTTGCATATATATCTAGTTATGTTTACAACAATTGCACAATGTTCAGTCCCATATTTCACAATTC
ACAACAATTGCACATGATGTGTTGTTGATTACTGCTCATTTATTGGCTCAATGTTTAAAATGAATGAATACACTACTCCA
TCCGATCCAAATTAATTGACGCGGTATCTATACAACCTCTATACAATGTTCTATACAGGCTGTGCCAATTAATTTGGATC
GGAGGGAGTAATAAGAGTAG-ATAGATTCCTTTCTAT-AGAC--CCAAAGATATT---------TGCATCTCTTCTCTTT
TTGCATATCCTTTCTTGTTATGCTTGCTGACTCAAAGCCTGATTAATTGTAAAATTTAACAGAAAATTGTTTCATTCTTT
CCACGTCTTGTTATTTATCTGTCTCGTCTT-GTTTGCATCAACTATGTATGCTATTGTTGTTGAGTGATTTGATTTG---
TACT---GT-----TTAAGTGAAACAAGAATAGTTTGCTGTGTCGAG----AGGCAAACATGATTTGAAAACTGAATTTC
TTGCAGTATGAATAAGAATAGGAAATCTGAATTGTATCCTTGTCGTGCTGCTGCGGTGCATTTTTTGCTTTACATAATTC
TTTTTGCCCCTCACAACTAGCTTGTGCTTTTG----TTTTTCCATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTCTGTACATGGTTTGAAACTCCGAGACACTGCAAACATACTTACTGTCAAGATAGTATCCTCGGATAAAGGCTTCCCA
ATCAATGTGTATGGCACTATCATCGCTAGAGACAGCATCGACCACAAGTGCATGTACCTCTTTAACCGCACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGCCTTTGCTTCAAAACCACTGCTTATGTGC----CTCTTGATTTTATTTA
TTTTGTAACTCTATTGCATATTCCGTTGGAGGCTTTATTGATATTTGGATTATCATAATCTAATCTTTTGAGCTATTGCT
TTTCACAGGATGAAAATCTGATCTTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATTGAT
CTTAAAATCAAGGTTGGCGAAGAGCCTCTAGGCGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTGCC
TAGAGGCAAAAAGGTTGCTGTTGCACATCAAACTCTTGAGAGCTGGTTTAGTATTGTGGACGTGAGGTATGCAACTCTTC
TTCATGCTGTCGAGGGTACGTTCGAGATCAAGTTACTTGAGGGACGTTTCTGTGGAAATATCACGGCTGGCATTGAGGGC
ATTCAACCTAGGATTGTGATTTATAATAGCAAGGAAGACGGTGTGGTGTCTTGTGAAGGCCGTACAGATATCACACTCCG
TCGGCGTGTCATGACCCTCCGTCTGGATGGTATGCTCACACTTGGCTTTGCAGTCCGTGGTCTTGGTGGTGCTGCT---A
CTAGAAAACAGAAAGTTGAATTCACACCACAACACCGTGGTGAAGAGAAAAAGGAGTTCTCTTGTGGTACTGCCAAGCTT
CAAGTGAAGGTCTTCTGGTCCATGCTGGACTATAGGC-------GGTA-ATCCTGTGGTAACATCACAAACAAAGTTGTG
GGTGTAATGAAGTGAGGGTTGTGTTATCATGCTTCAAA-TGATGTAATGGATCAAGTAATGTTTG--TAGCGAACTAAGT
TATATGTTTATATTGTCGTGGGGTAGTGTATTGAATTGGTTGCTTCTGCCTTTTGGCAATACTGGATGGAAGCACTTGTG
TTTGAAGTATATTATGCAGAAATCTGAACGTTTCTATTTTCTGTTATCTATTACT-------------------------
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>chr1A_1
AACGAACTCATCACACATTGAGCAATGAAATCCCTTTTAATCCCCAAAAAACAAAAAACAAAAACTGCTCCAGCAGAATC
TGCTAGGAGACTAACTACAAGAAAACTAGGAATACACTCCAACCAGCATTTTGTCACGTCAAGGGTGTGTTAGCCTGTTT
AGCACACAAATGTGCCGTGAAGTTTGCTGATCGGAAAACATGCTGAATAGAGAAGGAACTAAAAGATGAAGCGAGCTCCC
CAATTTCATCCAATATACTTCCTTTGTTTCTAAATATTTGTCTTTTTTAAAAATTTCAGCAAGTAACTGCATACGAAGCA
AAATGAGTGAATCTATATACTATAAAATATGTCTATACACATCCGTATATGGTAGTCCATTTAAAATCTCTAAAAA-ACA
AATATTTACGAACGGAGGGAGTAGACGCCAGTATTGACTGACACATATTCTAGAGATTAACAATCTCCAAGGAGTCTGTT
TCCATCACAACTTTCACATCACCCCTTAGAGCATCATCAATAGATGATGCAAATTTGAAGATATGAAACAGCAGATGTAA
AATTTTACGTCTCCAAAAAGTGCATTTTACATCTTTAAAAAAAGGCAACTCCAACCGATGATGTAAATTGGTGAGGTAAA
AGTACAACTCCAATAGATGATGCAAATGAAGATGTAAAACTAGTCAGCATGAGTGTTGGTGGACCGAGCGGCAGAAGAAG
GTGCATCGACGGCAAAGCGACGAGAGCCAGGAGGTCGAATGCGGCGGCGGGAGCTCGAATGGTCGGTTGCGCGATTCTGA
GTCGAGCGGCGAATTGCCG-CGGTGGGACAGCAGGGCGACGGCCGTGTGGCGCGAGAAGGTCAAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGGGCTCAAATCATACGACAATGAAGAAGCGGCCAATTCGGCCGATTTG
GAGGCGAGTGGTGGTGGAGCAGCGGCGGAACCGGGGGCGGGGGCGGTGGAGCAGCTGGATCTGGTAGTGGGGCGGCAACC
ACGACGGTGACAGGATGGGGTGAGGCAAAATTGAGGCGGCGGTGTGGAGGCAGATGCGGGATTGGAGACAGTGGTCGCGC
CATCGAAGGCCCCGACGGGGTGGGCGGCTATGGCGGAGGAGGCGGTGGGGTCGAAAGAATTAGCCATGGCCCGGGCGGCA
GTCGGCGGGCGACTGGTGGGCGGGCGAAGGAAAATAAAAGCGGTTAGGCAGTTGACACACAACCG-------TACATCTT
GTGGAGGTGAGGGTTGTATTTTACATCTTCTGGTGATGGATATGTAAGTTTACATTTACATCATCTGTTGAAGAGGGGTT
TTGAGATTTCGGAGATGAAAAACT-ATTATTTTTACATCTACATCATCTACTGAATATGCTCTTAGCTTTGCAAATATAA
CCCCATCGCGCAGTGCAAGAGCTTCAGAGATTAGCAGATCAGTAATACCTGAATATGGTTTACACCAAGCGGCCACGAAA
CCGGAGCAGGACCTGGGCACACCTCCTGATCCTCCCCTGCGAGCGTCCGTCGAAATCCCTTCTGTATTGATCTTGAACCG
GTAAACTCTTGCAGTGATAGTGAGCGACGCATTGGAATTTCTATAGAGAGTAAATTGAAATTTGAATATCCCATTCCCCG
CTCCTAGCGGTGAATACTTTATTTTAGGGACCTTTTTTTCGAGGGACCTAGAGGTGAATACTTTGTTAATCGAGCATACA
CAAAACCTTTTCCACCTGATTTTGTGAACGGTTACGTGGCAATTGTTCTTTTCTTTTCTTCCGGATTTTTTTCTCATGTT
TTCTTGCTTTTTTTTGTGAAAATCTAGGACATGCTTTTCGTGTTCATTTAAAAAGTCATGAATGTTCTTTTGAAATTTCT
AGAACATTCATAATAACATAGGATCATTTTTTATATTTCTAAACATTTTTAAAATTTGTGAACGTTTCCAAATATATGAA
CA-------------------TTTTTTTATAAAACCTGATGGAACTAAAAACCGGCTGATGTAAAATATCGGCCAGAAAC
TAAAAA--------------------------------------------------------------------------
---------------------CCGTGCGATCCAATTTCTCCGGTCCCACCCATCAATCTCGGGGGCCAGAGGGG------
------------AAATTATCAAATGGAGAAGGAAAGTGTGGCTTATATGATCCAATTTCTCTTCTCCTGCCGAACGGAGC
GCACTATAGCTTAATGGGCCGTCTTTCGCGTAAAGATTAATAAGGCCCAGCCCGAAGCAGCAGCGGCGAT----------
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---------------------------------------TAGGAATAAAAAGGAGGAATCGGGCAGGCCTCGACCGTGGA
CGGCGACTTAGGGTTAGCTTCATCGGCCTTGGCGGCGACGGTGACGGCGACGGCGGGGAATTGGGATTCATGGCGTGCGT
AGGGGAGGAGGAGT---------TGAGTTGGGAGGACCTCTTCTTTAACAAGGCGGCGATGCTGGCCGCGGCGCAGGAGG
AGGA----------------------------------------------------------------------------
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-------------------------------------------------------------------GGAGGCGGAGA--
----------AGGAGAAGGCGCGGGAGGCAGAGGAGAAGGCGCGGAAGGCGGCGGAGAACCGGCGGCGACGCCTAGCGCA
CCAGCAGGTCAAGGCATCCATCCTGGAGCACGACCCCAAGACGAAGCGCAAGGTCTACACCCGCTACTCCTTCAACGACT
TCTCGGTCTTCGACATCAACGCCGAGTGTAAGTCCGCC-------ATCAAAACCTAGATCCCGACCTGATTCTATTTCAA
AGGCATACATTTCCAACTGTGTATGTATGTA-TGTATTTATGTATGTTTCTTTCAAGTTGTTTTCACGATTGCTAGCCTG
ATTGCTGGAATCCCCCATACATACATATCTACTTATGTTTAGAACAATTGCACAATGTTCAGTCCCATATTTCACAATTC
AAAACAATTGCACATGATGTGTTGTTGCTTACTGCTCATTTATT------------------------------------
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----------------------------------------------------GGCAAACATGATTTGAAAACTGAATTTC
TTGCAGTATGAATATGAATAGGAAATCTGAATTGTATCCTTGTAGTGCTGCTGTGGTGCATTTTATGCTTTACACAATTC
TTTTTGCCCCTCACAACTAGCTTATGCTTTTG----TTTTTACATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTGTGTAAATGGTTTGGAACTCCAAGACACTGCAAACATACTTACTGTCAAGATAGTCTCCTCGGATAAAGGCTTCCCA
ATCGATGTGTATGGCACTATCATCGCTAGAGACAGCATTGACCACAAGTGCATGTACCTCTTTAACCGCACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGTCTTTGATTCAAAATCACTGCTTATGTGC----CTCTTGATTTTATTTA
GTTTGTAACTCTATTGCATATTCCGTTGCAGGCATTATTGGTATTTGGATTTTCATAATCTAATCTTTTCAGCTATTGCT
TTTCACAGGATGAAAATTTGATCTTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATAGAT
CTTAAAATCAAGGTTGGCGAGGAGCCTCTAGGCGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTGCC
TAGAGACGAAAAGGTTGCTGTTGCACATCAAACTCTTGAGAGCTGGTTTAGTATTGTGGACGTGAGGTATGCAACTCTTC
TTAATGCTGTTGAGGGTACGTTCGAGATCAAGTTACTTGAGGGACGATTCTGTGGAAAGATCATGGCTGGCATCGAGGGC
ATTCAACCTAGGATTGTGATTTATAATAGCAAGGAAGACGGTGTGGTGTCTTGTGAAGGACGTACAGATATCACACTCCG
GCGGCGAGTCATGACCCTCCGTCTGAATGGTATGCTCACAGTTGGCTTTGCAGTCTGTGGTGGTGGTGGTGCTGCT---A
CTAGAAAACAGAAAGTTGAATTCACACCACAGCACCGTGGTGAAGAGAAAAAGGAGATTT----------------GCTT
CAAGTGAAGGTCTTCTGGTCCTTGATGGACTATAGGC-------CGTA-ATCCTGTAGCAACATGACAAGCTAAGTTGTG
--------------------GTGTTATCATGCTTCAAA-TGATGTAATGAATCAAGTAATGATTG--TAGTGAACTAAGT
TATATATTTATATTGTCATGGAGT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1A_412
--------------------------------------------------------------------------------
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----------------------------ACATGCTTTTCGTGTTCATTTAAAAAGTCAAGAATATTCTTTTGAAATTTCT
AGAACATTCATAATAACATAGGATCATTTTTTATATTTCTAAACATTTTTAAAATT------------------TGTGAA
CGTTTCCAAATATATGAACATTTTTTTTATAAAACCTGATGGAACTAAAAACCGGCTGATGTAAAATATCGGCCAGAAAC
TAAAAA--------------------------------------------------------------------------
---------------------CCGTGCGATCCAATTTCTCCGGTCCCACCCGTCAATCTCGGGGGCCAGAGGGG------
------------AAATTATCAAATGGAGAAGGAAAGTGTGGCTTATATGATCCAATTTCTCTTCTCCTGCC---------
--------------------------------------------------------------------------------
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--------------AACGGAGCGCACTATAGCTTAATGGGCCGTCTTTCGCGT---------------------------
AAAGATTAATAAGGCCCAGCCCGAAGCAGCATCGGCGATTAGGAATAAAAAGGAGGAATCGGGCAGGCCTCGACCGTGGA
CGGCGACTTAGGGTTAGCTTCATCGGCCTTGGCGGCGACGGCGACGACGACGGCGGGGAATTGGGATTCATGGCGTGTGT
AGGGGAGGAGGAGT---------TGAGTTGGGAGGACCTCTTCTTTAACAAGGCGGCGATGCTGGCCGCGGCGCAGGAGG
AGGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GGAGGCGGAGA--
----------AGGAGAAGGCGCGGGAGGTAGAGGAGAAGGCGCGGAAGGCGGCGGAGAACCGGCGGCGACGCCTAGCGCA
CCAGCAGGTCAAGGCATCCATCCTGGAGCACGACCCCAAGACGAAGCGCAAGGTCTACACCCGCTACTCCTTCAACGACT
TCTCGGTCTTCGACATCAACGCCGAGTGTAAGTCCGCC-------ATCAAAACCTAGATCCCGACCTGATTCTATTTCAA
AGGCATACATTTCCAACTGTGTATGTATGTA-TGTATTTATGTATGTTTCTTTCAAGTTGTTTTCACGATTGCTAGCCTG
ATTGCTGGAATCCCCCATACATACATATCTACTTATGTTTAGAACAATTGCACAATGTTCAGTCCCATATTTCACAATTC
AGAACAATTGCACATGATGTGTTGTTGATTACTGCTCATTTATT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GGCAAACATGATTTGAAAACTGAATTTC
TTGCAGTATGAATATGAATAGGAAATCTGAATTGTATCCTTGTAGTGCTGCTGCGGTGCATTTTATGCTTTACACAATTC
TTTTTGCCCCTCACAACTAGCTTATGCTTTTG----TTTTTACATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTGTGTAAATGGTTTGGAACTCCAAGACACTGCAAACATACTTACTGTCAAGATAGTCTCCTCGGATAAAGGCTTCCCA
ATCGATGTGTATGGCACTATCATCGCTAGAGACAACATCGACCACAAGTGCATGTACCTCTTTAACCGCACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGTCTTTGCTTCAAAATCACTGCTTATGTGC----CTCTTGATTTTATTTA
GTTTGTAACTCTGTTGCATATTCCGTTGCAGGCATTATTGGTATTTGGATTTTCATAATCTAATCTTTTCAGCTATTGCT
TTTCACAGGATGAAAATTTGATCTTAACTGGCCCAGTTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATAGAT
CTTAAAATCAAGGTTGGCGAGGAGCCTCTCGGCGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTGCC
TAGAGACGAAAAGGTTGCTGTTGCACATCAAACTCTTGAGAGCTGGTTTAGTATTGTGGACGTGAGGTATGCAACTCTTC
TTAATGCTGTTGAGGGTACGTTCGAGATCAAGTTACTTGAGGGACGATTCTGTGGAAAGATCATGGCTGGCATCGAGGGC
ATTCAACCTAGGATTGTGATTTATAATAGCAAGGAAGACGGTGTGGTGTCTTGTGAAGGACGTACAGATATCACACTCCG
GCGGCGAGTCATGACCCTCCGTCTGAATGGTATGCTCACAGTTGGCTTTGCAGTCTGTGGTGGTTGTGGTGCTGCT---A
CTAGAAAACAGAAAGTTGAATTCACACCACAGCACCGTGGTGAAGAGAAAAATGAGATTTCTTGTGGTACTGCCAAGCTT
CAAGTGAAGGTCTTCTGGTCCTTGATGGACTATAGGC-------CGTA-ATCCTGTAGCAACATGACAAGCTAAGTTGTG
--------------------GTGT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1D_848
--------------------------------------------------------------------------------
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-------------------------------AAAGATTAATAAGGCCCAGCCCGAAGCAGCAGCGGCGATAGGAATAAAA
CTGAGGAGTCGGCAAGGCCTGGACCGCGGCGGCGCTCATGGCATTTGCTTGATTTGTAGTCCCGATTTGTTGTGTGTCTG
AAATGGAGCTAAAAAAAATTCTTGTGTTTCTACTAATAACTTGATTGTGCTTCTGGTTTGAAGTTGTGACATGGATTTGA
TGGTTGACAGTTGAGAAAGCCAGGATGTGAAGGTGCCAAATTCTCAGTGTTTATGGCATTTGATTGACCTAGAAAACTGA
GCTACAGGACTGTGTTTAGAAGCCGTATCTAGTGTTCCTTATTTTTGGTGTTAATCACCAAACGTTGAAGTACGATAGCA
TTGCAAGTCTAAATAAGCAAATCAGAGTGGCGCAGCGGAAGTGTGGTGGGCCCATAACCCACAGGTCCCAGTATCGAAAC
TTGGCTCTGATAAATAAATTTTTTTGCTGATTTTTCCTTTCGGCCTCAGTTCAATATGGTCTAGGGGTGTATGATTGGGC
TTGATGATGTGCAGTTGCGCGCATGGCCCAGTACGACGTGGCTCCTCTTCCTGACGTCACCCGAAATTATTTTCTTCTCC
TCATTTTTACTTTATTTACATTTCATGCATCCCCTTAAAAATTAAATGCATATATTTTTAAAACCTAAATTTATTTATCG
AATTTAAAATCACGAGCTTGAAAAAAAATCTTAACATAGTATAAAAATTGTTACATGGTTAAAAAAAATGATGATATAAC
TTTCAAAAAATTGTTTCTGATAATGAACAAATATTCTCGTGTTTCAAGAAAATGCATGTAGTTAAACCTGCGTGGAAGCC
GAGGAACCTACTGATGTAAAATATTCATAAACATATTTAAAATTTGTGAACATTTTAAAAATTTATGAGTATTTAAAAAA
CCAGAGGGAACAAAAAATCCGGCTGATGTAAAATATCGGTCGAAAATTAAAAACCCTTTGTAAACCATTGTACTCTACAC
CAAAACCGATTGGACCGTATGCATCGTTCTCCTTCCGAACAGAGCGGCGGAAATGAAAAACCGGCTGATGTAAAATATCG
GTCGGGAAATAAAAACCTTCTGTAAACAATCGTACTGTATACCAAAACTGACTGGACCGACAAACCAACATGTGGTTGGA
TGGTTAGGAGGATAGTGGTATCCCCAGCCCACCAGAGTATATGTCCTAAAATTGACATTGGTGCTCGCATTTTTCTGGAT
TTATTTAGGTTTCCGGCGATGTTCGTTCAGTGGGAGGAGACATCCCTGTCGAGTAGGAGGCGCCTATGGTGGCTTCAGAA
AATCAGCTCAGCCTCTCGGAGGTACTCATAGGGGTATAGTGCCGCCCTAGGGATAACACTCCCATTGTTTCCTCCAACTC
CTTGGCGAATATGATTGTTGACCGGTTTGCAATCTGATGCGATATGAAGATGATGCATGCCCAAGTCTCGCGCCAACGAT
AAAGCCTCTCGGCATGCTAAAGCTTCTAGGAGTAGCAGGATCAGCAATGCCATGAATCACTAGCACCGAAGACCCAGTAT
AGGAACCATCTCGGTCTCGACAAAAGATGGTCTTGACAAATTGCTGCTGCTGTGTCTACGTTGCTCCACTGATAGTCCCG
CATCAACATTAATTTGTATTTGTCCTACAGCAGGCGGGATCCAGCGATGTTACCCATTATTGCATGTAGTCCGAATCATA
CCAGGTGCTTTTGGTGTTCCCGAAAGCTGATCCAAGTTCGAGATAAAGCTTGAAACAAATCTATGTGTTTTATACGGACT
CTAATTAATCCCTTCATGAATAAGCTCCCTTCTCGCATAACATATTGCCCAAAAAGTGATTGACATCCGTGTGAATTCAT
CATGACTAGGACATCTATCATAGAATAGAGGCAGTCTTTAGCATCTAATTCCGTTGTTGCGATCATGTGTTTCAAAAGGT
CATGGTCCACTAAAAGTCTAAAACCCATACACAGCGTGCCATGGTGCACTCAATGAGGCTATGTCGCCATGAGTCTTGAG
CCCCACATGCAAAACACTGGTCATGGTGCGACATTTTCCTGTGCTTTCGAACGTCCTCTGTCGGCAACGGAATTCTTTGA
CAATCTCCATAAGTAAGGTGTGTATGAATGCATTATAGGAACGAATGTATGCTTGTGTATGTGAGCGATTTTGATTGGAC
CGTAGAGGTTGCCGAACAGAGTGCACTATAGCTTATGGGCCGCCCTTACTTACCCCCTCGCACGTGGTGCGTGGATGGAA
AAAGATTAATAAGGCCCAGCCCGAAGCAGCAACGGCGG-TAGGAATAAAACAGAGGAGTCGGGAAGGCCTCAACCGCGGC
CGGTGACCTAGGGTTAGCTTCATCGGCCTTGGCGGCGACGGTGACG------GCGGGGAATTGGGATTCATGGCGTGCGT
AGGGGAGGAGGATCTGGTCAAGGTGAGTTGGGAGGACCTCTTCTTTAGCGAGGCGGCGATGCTGGCCGCCCCGTAGGAGG
AGGAGGAGGCTGAGGAGGAGAAGGCGCGGTAGGATGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGCCTA
GATCACAAGCGGGTCATGGGGTCCATCGTCGAGTACGGCCCCAAGACGAAGCGCAAGGTCTACACCTGCTACTCCTTCAA
CAACTTCTCCCTCTTCGACATCAACGAGGAGTGTACGTCGGCCATCGAAACCTAGATCCTGACCCGATTCTATTTCAAAG
GATTGCTAGCCCCACTGCTGGAATCTTCCTTGCACGCGTAGTTATGTTTAGAACAATTGCACAATATTCAGTGCCATATT
TGATAATTAAACCCGATTCTTATTGAACAACATATAGCTCTCCAGAGCATCTAATTAAACCATACATTGAAACTATCTAA
AACATTTCAATGCAACAACAAATGCGATCATAATCGCAACCAAGGTAACAATTGATCCAACGGCATAATGATACCAAGCC
TCGGTATGAATGGCATATTTTCTAATCTTTCTAATCTTCAAACGCATTGCGTCCATCTTGATCTTGTGATCATCGACGAC
ATCCGCAACATGCAACTCCAATATCATCTTCTCCTCCTTAATTTTTTTATTTTTTCCTTCAAGTAATTGTTTTCTTCTTC
AACTAAATTTAACCTCTCGACAATAGGGTCGGTTGGAATTTCCGGTTCACATACCTCCTAGATAAATAAAATCTATGTCA
CATTGGTCGGCATAATTGTCATAAACAATAAATGAACCAAATAGTTATAAAAGATAATATATATACCACATCCGAATCAT
AGACAAGACGAAGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAATAACAAGCAATAAGAAAAGTAAGAAAAA
TAGACAAGTATCTATCTAAAGTAAGTATTTTTTTTTCAGAAAGAAGATAAGAACAAGAGGCTCACCACGGTGGTGCCGGC
GACGAGATCGGCGCGGCGATCGACGGCGGTGAAGACGGGGACGGGACGTGACGGACTGCTAAACCTAGACAAATCTCGGG
GAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAACTAGTGTGGCTCGGACATTTCATCGAACACCTCATG
TCCATAGAAGGTGAGCTAGAGCACCACAAAGCACTCCCCTCGCCGGCCAGAAAAAGCAGAGCAGTGTGGAGTGCTCTGCT
GCGGCGATGGGGTATATATAGGCAACTCATTGGTCCCGGTTCGTGGCTGGAACCGGGACTAATGTCCCCCCTTCTGTCCC
GGTTCCAGCCACGAACCGGGACCAATGGCTCTGGGCCAGGAGTGAGGGTCATTGGTCCCGGTTCGTGCCTGGAACCGGGA
CAAATGGGTCCAGACGAACTGGGACCAATGCCCCACGAGGCCCGGCCGCCCCCCTGGGTGCACGAGCCGGGACGTATGCC
TCTCATGGGTCTCGTTTTGTGACTGAACCGGGACTAATGGGCTGGCCAGGCCCCAACCAAAGCCCTGTTTTCTACTAGTG
ATTTCTTCATTATCTACATCTGAGTCTCTTTCCGCATGGCTTTGGTTACGACGTTTTAGAAGAATGCAAGTTTTTTAACG
AAAAACACCATTGGTTTGTTTTATTTCGCTAAGAGTGTTTGGAATACATCATGTGCAACGATCAATAAGACAAGTTGCGT
CAAGAAGACAATAGGGCCCATGTCAAAAAAGGAAGAAGCAACGGAACTTCAACTTCCTCGGCTTCACTAGTGGCGGGATG
CTCGAGATGTTCCACCATCCTAGATGAAGAGCTCCAAGCGGACGAGACCAAACCATGCCGCCTAAAAGGCATTGATGCAG
CCTAAGGACAACGAGCAACCTAGTCCACACCCAAACAAAGAGCATGCACAACCGAGGTTATCACACCCAACAACGACATC
ACCAGCAAATTGTATAAGGGCATCAAGTATATGAGTCCTAGCCGAGAGAGCTTCATAACACACGCCTACCACTCAGATCA
CCGAGGAAAATCTCTAGCACGTCCAAAGAAGAATGAGTAGCCATAGAGAAAAGGATGGCCTTCAACCTCTACCAGCTTCA
CCAATGAGAGTCTGCGCTAGGAGCATCACCACTGTACACAAAGAGCTTCAATCCAGTAAGAACAAGCCATAACACTTCGA
GGCTATTGCCACAACCAAAGGGCAACGTTCAGCCGAGTCTAGGCCACATGCATAAATAAAGAGTCTAGTGCAGCCGAAGC
TACAGCACAACAAAGATGTCTTTGGCTAAATCAATGGTCATCACAGAGCTGAAAGTGAAAGAATGTTCATGAATTGGAAA
CAATGATCATGAATTTTTAAAAAATATAATGAATTTAAATAATGTTTGTGCACTTCGAAAAATTCATAAAATTTCGGAAA
ATGTTCATCATTCCAAAAAAGTTCCTGAATTTTAAAATATTCTGCAAATATGGAAAAAATTACGAGTTTGAAAATTGTTC
TCAATTAAAAAAATGGTCATGATTGTTTTGTAAAAATTTAAAATATTAAGAAAAATTAAAGTATTTTTGAATTAATAAAA
TCTTAGTTGATTTGAAAATTAGCCTTGAATTGAATAATGTTCAAAATTTGAATTATTTTCACAAATCTAGAAAATGCTCA
CTAATTTTAATTTTTTTGCAAATTTAAAATGTTCACCAATTTTTACATTAGTATTGAATTCAAAAATTTCATGAACTAAA
TTTATTTTCACGAATTTTATAAATTTTCCAGATTTTGAATTTTTCCTATAATTTTAAAATGTTAGCTAATTTTAGTTGTG
AATTAATAAAGCGACAAATAACATTTTTAAATAAAATAAAAGTAAAAGTAATACCTATCTTGGTAATGGTAACCTTCCCA
AAACCTGGCTCTAGGTTCTTGAACATTCCTACAAATTGGTCGTCAGCTGTCACAAATGGGCCCATCCAAAGAAGCAGGCC
AGTTGGGCCTTGGCCTAGCCTGAAGGATTTAGCAGCAGAGCGATAGGGAAATAAAGGAGGAGGGCGTGGAGCCGGGCAGG
CCTCGACTTAGGGTTAGCTTCATCGGCGGCGGCGGCGGCTGCTGGGACAGGGATCGTCATGGCTTGCGTCGAGGAGGATG
ACTTCTGCTTTGTGGAGCCTATCTTCTACGATGAGGCGAGGGATCTAGCCAGGCGAGCTCGGGCGTTGGAGAAGAAGGCG
CGGCAGGAAGAGGAGAAGGCGCGGCAGGAAGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGCCTAGATCA
CAAGCGGGTCATGGCATCCATCGTCGAGTACGACCCCAAGACGAAGCGCAAGGTCTGCACCCGCTACTCCTTCAACGACT
TCTCCGTCTTCGACATCAACGAGGAGTGTAAGTTGCCC-------ATCGAAACCTAGATCCC-----GATTCCGTTTTAA
AGGCGTACATTTCCAATTGTGTGTTTACA-----------------TTTCTTGGAAGTTGTTTACATGATTGCTAGCCCC
ACTGCTGGAATCTCCCTTACAGATAGTTATG--------TAGAACAATTGCACAATATTCAGTCCCATATTTCATAATTC
GCGACAATTGCGCATTATATGTTGTTGATTACTGCTCATTTGTTGGCTCATTGTTTAAAATTAATAC----ACC------
--------------------------------------------------------------------------------
---------AACAAGAGTAGCATAGATTCCTGTCTAG-ACACAACAGAAAAGATTCGCGTCCTGTGCAACTCTTCTCTTT
TTCCATACCCTTACTTGTTATGCTTGCTGACTCAAACCCTGATTAATTGTTAAAGTTAACAGAAAA-TGTTTCATTCTTA
CCATGTCTTGTTATTTATCTGTCTCGTGTT-GTTTGCATCAACTATATATGCGGTTGTTGTTGAGTGATTTGATTTGTAC
TACT---GT-----CTAAGTGAAATAAGAATAGTTTGCTGTGTTGAGTGAGACGCAAACATGGTCTGAAAAGTGAATTTC
TCGCAGTATGAATGTGAATACGAAAACTGAATTGTAT-------------------TGCATTTTTTGCTTTACATAATTC
TTTTGT-CCCTCACAATTAGCTGCTGCTGCTTTTGTTTTTTCCATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTCTGTACATGGTTTGAAACTCCGAGACACTGCAAACATACTTACTGTCAAGATAGTATCCTCGGATAAAGGCTTCCCA
ATCAATGTGTATGGCACTATCATCGCTAGAGACAGCATCGACCACAAGTGCATGTACCTCTTTAACCGCACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGCCTTTGCTTCAAAATCACTGCTTATGTGC----CTCTTGATTTTATTTA
TTCATGTA--------CATATTCCGTTGGAGGCTTTATTGATATTTGGATTATCATAATCTAATCTTTTGAGCTATTGCT
TTTCACAGGATGAAAATTTGATCTTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATTGAT
CTTAAAATCAAGGTTGGCGAGGAGCCTCTAGGCGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTGCC
TAGAGGCAAAAAGGCTTCTGTTGCACATCAAACTCTTGAGAGCTGGTTTAGTACTGTGGACGTGAGGTATGCAACTCTTC
TTCATGCTGTCGAGGGTACGTTCGAGATCAAGTTACTTGAGGGACGTTTCTGTGGAAATATCACGGCTGGCATAAATGGC
ATTCAACCTAGGATTGTGATTTATAATAGCAAGGAAGACGGTGTGGTGTCTTGTGAAGGCCGTACAGATATCACACTCCG
TCGGCGTGTCATGACCCTCCGTCTGGATGGTATGCTCACACTTGGCTTTGCAGTCCGTGGTCTTGGTGGTGCTGCT---A
CTAGAAAACAGAAAGTTGAATTCACACCACAACACCGTGGTGAAGAGAAAAAGGAGTTCTCTTGTGGTACTGCCAAGCTT
CAAGTGAAGGTCTTCTGGTCCATGCTGGACTATAGGC-------GGTA-ATCCTGTGGTAACATCACAAACAAAGTTGTG
GGTGTAATGAAGTGAGGGTTGTGTTATCATGCTTCAAA-TGATGTAATGGATCAAGTAATGTTTG--TAGCGAACTAAGT
TATATGTTTATATTGTCGTGGGGTAGTGTATTGAATTGGTTGCTTCTGCCTTTTGGCAATACTGGATGGAAGCACTTGTG
TTTGAAGTATATTATGCAGAAATCTGAACGTTTCTATTTTCTGTTATCTATTACT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>chr1D_935
--------------------------------------------------------------------------------
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---CGACTTAGGGTTAGCTTCATCGGCGGCGGCGGCGGCTGCTGCT----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------GGGACAGGGATCGTCATGGCTTGCGTCGAGGAGGATG
ACTTCTGCTTTGTGGAGCCTATCTTCTACGATGAGGCGAGGGATCTAGCCAGGCGAGCTCGGGCGTTGGAGAAGAAGGCG
CGGCAGGAAGAGGAGAAGGCGCGGCAGGAAGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGCCTAGATCA
CAAGCGGGTCATGGCATCCATCGTCGAGTACGACCCCAAGACGAAGCGCAAGGTCTGCACCCGCTACTCCTTCAACGACT
TCTCCGTCTTCGACATCAACGAGGAGTGTAAGTTGCCC-------ATCGAAACCTAGATCCC-----GATTCCGTTTTAA
AGGCGTACATTTCCAATTGTGTGTTTACA-----------------TTTCTTGGAAGTTGTTTACATGATTGCTAGCCCC
ACTGCTGGAATCTCCCTTACAGATAGTTATG--------TAGAACAATTGCACAATATTCAGTCCCATATTTCATAATTC
GCGACAATTGCGCATTATATGTTGTTGATTACTGCTCATTTGTTGGCTCATTGTTTAAAATTAATAC----ACC------
--------------------------------------------------------------------------------
---------AACAAGAGTAGCATAGATTCCTGTCTAG-ACACAACAGAAAAGATTCGCGTCCTGTGCAACTCTTCTCTTT
TTCCATACCCTTACTTGTTATGCTTGCTGACTCAAACCCTGATTAATTGTTAAAGTTAACAGAAAA-TGTTTCATTCTTA
CCATGTCTTGTTATTTATCTGTCTCGTGTT-GTTTGCATCAACTATATATGCGGTTGTTGTTGAGTGATTTGATTTG---
TACTACTGT-----CTAAGTGAAATAAGAATAGTTTGCTGTGTTGAGTGAGACGCAAACATGGTCTGAAAAGTGAATTTC
TCGCAGTATGAATGTGAATACGAAAACTGAATTGTAT-------------------TGCATTTTTTGCTTTACATAATTC
TTTTGT-CCCTCACAATTAGCTGCTGCTGCTTTTGTTTTTTCCATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTCTGTACATGGTTTGAAACTCCGAGACACTGCAAACATACTTACTGTCAAGATAGTATCCTCGGATAAAGGCTTCCCA
ATCAATGTGTATGGCACTATCATCGCTAGAGACAGCATCGACCACAAGTGCATGTACCTCTTTAACCGCACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGCCTTTGCTTCAAAATCACTGCTTATGTGC----CTCTTGATTTTATTTA
TTCATGTA--------CATATTCCGTTGGAGGCTTTATTGATATTTGGATTATCATAATCTAATCTTTTGAGCTATTGCT
TTTCACAGGATGAAAATTTGATCTTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGCGATTGAT
CTTAAAATCAAGGTTGGCGAGGAGCCTCTAGGCGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTGCC
TAGAGGCAAAAAGGCTTCTGTTGCACATCAAACTCTTGAGAGCTGGTTTAGTACTGTGGACGTGAGGTATGCAACTCTTC
TTCATGCTGTCGAGGGTACGTTCGAGATCAAGTTACTTGAGGGACGTTTCTGTGGAAATATCACGGCTGGCATAAATGGC
ATTCAACCTAGGATTGTGATTTATAATAGCAAGGAAGACGGTGTGGTGTCTTGTGAAGGCCGTACAGATATCACACTCCG
TCGGCGTGTCATGACCCTCCGTCTGGATGGTATGCTCACACTTGGCTTTGCAGTCCGTGGTCTTGGTGGTGCTGCT---A
CTAGAAAACAGAAAGTTGAATTCACACCACAACACCGTGGTGAAGAGAAAAAGGAGTTCTCTTGTGGTACTGCCAAGCTT
CAAGTGAAGGTCTTCTGGTCCATGCTGGACTATAGAC-------GGTA-ATCCTGTGGTAACATCACAAACAAAGTTGTG
GGTGTAATGAAGTGAGGGTTGTGTTATCATGCTTCAAA-TGATGTAATGGATCAAGTAATGTTTG--TAGCGAACTAAGT
TATATGTTTATATTGTCATGGAGTGGTATATTGAATTTGTTGTTTCTGCCTTTTGGCAGTACTGGATGGAAGCAGTTATG
TTTGAAGTGTATTATGCTGAAAGTTGAACATTTCTATTTTCTGTCATCTATTACT-------------------------
--------------------------------------------------------------------------------
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>chr1B_935
--------------------------------------------------------------------------------
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---CGACTTAGGGTTAGCTTCATCGGCGACGGCGGCGGCGGCGGCG------GCGGC-----------------------
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---------------------------------------------GACAGGGATCGTCATGGCTTGCGTGGAGGAGGATG
ACTTCTGCTTCGTGGAGCCTTTCTTCTACGATGAGGCGAGTGATCTAGCCATGCGAGCTCGGGCGTTGGAGATGACCCGG
CGGAAGGAAGAGGAGAAGGCGCGGCAGGAAGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGACTAGATCA
CAAGCAGGTCATGGCATCCATCCTGGAGTACGACCCCAAGACGAAGCGCAAGGTCTACACCCGCTACTCCTTCAACGACT
TCGGCGTCTTCGACATCAACACCGAGTGTAAGTCCGCC-------ATGAAAACCTAGATCCCGACCTGATTCTATTTCAA
AGGCATACATTTCCAATCGTGTGC----GTA-TGTATTTATGTATGTTTCTTTCAAGTTGTTTTCACGATTGCTAGCCTC
GTTGGTGGAATCTCCCTTGCATAT----CTAGTTATGTTTACAACAATTGCACAATGTTCAGTCCCATATTTCACAATTC
AGAACAATTGCACATGATGTGTTGTTGATTACTGCTCATTTATTGGCTCAATGTTTAAAATGAATAT----ACTACTCCA
TCCGATCCAAATTAATTGACGCGGTATCTATACAACCTCTATACAATGTTCTATACAGGCTGTGTCAATTAATTTGGATC
GGAGGGAGTAATAAGAGTAG-ATAGATTCCTTTCTAT-AGAC--CCAAAAAGATTTGCATCCAGTGCAACTCTTCTCTTT
TTGCATACCCTTTCTTGTCATGCTTGCTGACTCAAAGCCTGATTAATTG-TAAATTTAACAGAAAA-TGTTTCATTCTTT
CCACGTCTTGTTATTTATCTGTCTCGTCTT-GTTTGCATCAACTATGTATGCTATTGTTGTTGAGTGATTTGATTTG---
TACT---GT-----TTAAGTGAAACAAGAATAGTTTGCTGTGTC----GAGAGGCAAACATGATTTGAAAACTGAATTTC
TTGCAGTATGAATATGAATAGGAAATCTGAATTGTATCCTTGTCGTGCTGTTGCGGTGCATTTTATGCTTTACATAATTC
TTTTTGCCCCTCACAACTAGCTTATGTTTTTG----TTTTTCCATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTGTGTAAATGGTTTGAAACTCCAAGACACTGCAAACATACTTACTGTCAAGATAGTCTCCTCGGATAAAGGCTTCCCA
ATCGATGTGTATGGCACTATCATCGCTAGAGACAGCATCGACCACAAGTGCATGTACCTCTTTAACCACACCAGGGACAA
TTGCCAACCTATCAAGTCAAGGGTACGTACGTCTTTGCTTCAAAATCACTGCTTATGTGC----CTCTTGATTTTATTTA
GTTTGTAACTCTGTTGCATATTCCATTGAAGGCTTTATTGGTATTTGGATTTTCATAATCTAATCTTTTGAGCTATTGCT
TTTCACAGGATGAAACTTTGATATTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATGAAT
CTTAAAATCAAGCTTGGGGTAGAGCCTCTAGGCGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTACC
TAGAGACGAAAAGGTTGTTGTTGGACATATAACTCTTGAGAGCTGGTTTAGTATTGTGGACGTGAGGTATGCAACTCTTC
TTAACGCTATCGAGGGTACATTCGAGATGAAGTTACTTGAGGGATGTTTCTGTGGAAAGATCATGGCTGGCATCGAGGGC
ATCGAGCCTAGGATTGTGATTTATAATAGCGACGAAGATGGTGTGGTGTCTTGTGAAGACCGTGCAGTTATCATGCTGCG
GCGGCGTGTCATGACCCTCCGTCTGAATGGTATGCTCACACTTGGCTTTGCAGTCCCTGGTGGTGGTGGTGCTGCT---A
CTAGACAATGGAAAGTTGAATTCACACCACGACACCGTGGTGAAGAGAAAAAGGAGATCTCTTTTGGTACTGCCAAGCTT
CAAGTGAAGGTCTTCTGGTCCATGCTGGACTATAGGC-------CGTA-ATCGTGTAGTAACATGACAAACTAAGTTGTT
-GTGTAATGAAGTGAGGTTTGTGTTATCATGCTTCAAAATGATTCAATGGATCAAGTAATGTTTGTATAGTGAAGTAAGT
TATATGTTTATATTGACGTGAAGTGGTATATTGAATTTGTTGGTTCTGCCATTTTGTAATACTGGATGGAAGGAGTAATG
TTTTAAGTGTATTGTATAGAAATTTGAACGTTTCTATTTTCTGTTATCTACTACT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>chr1B_1099
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
CGGGAGGAAGAGGAGAAGGCGCGGCAGGAAGAGGAGAAGGCGCGGAAGGCGGAGGAGAGACGGCGGCGAGGCCTAGATCA
CAAGCGGGTCATGGCATCCATCGTCGAGTACGACCCCAAGACGAAGCGCAAGGTCTACACCCGCTACTCCTTCAACGACT
TCGGCGTCTTCGACATCAACGAGGAGTGTAAGTTGCCC-------ATCGAAACCTAGATCCTGACCCGACTCTATTTCAA
AGG-----------------------------------------------------------------ATTGCTAGCCCC
ACTGCTGGAATCTTCCTTGCATGCG----TAGTTATGTTTAGAACAGTTGCACAATATTCAGTGCCATATTTGATAATTC
AGAACAATTGCACATGATGCGTTGTCGATTACTGCTCATTTGTTGGCTCATTGTTTGAAATGAATGAATATACTAACAAA
--------------------------------------------------------------------------------
------AGTAACAAGAGTAGTATAGTTATAGATTCCTGAGAC--CAAAAACGATTTGCGTTCAGT---------------
------ACCCTTACTTGTTATGCTTGCCGACTCAAAGCCTGATTAAT-GTAAAAGTTAACAGGAAA-TGTTTCATTCTTA
CCACGTCTTGTTATTTATCTGCCTCGTGTTAGTTTGCATCAACTATATATGCTATTGTTGCTGAGTGGCTTGATTTG---
TACT---GTCTAAGCTAAGTGAAATAAGAATACTTTGCTGTGTTGA-TGAGAGGCAAACATGGTCTGAAAAATGAATTTC
CCGCAGTATTAATGTGAATACGAAAACTGAATTGTAT-------------------TGCATTTTTTGCTTTACATAATTC
TTTTGT-CCCTCACAATTAGCTGCTGCTGCTTTTGTTTTTTCCATCGCAGCGCCTATCCCTCCAATGCGATACACCAAGA
GGTATGTACATGGTTTGAAACTCCAAGACACTGCAAACATACTTTCTGTTAAGATAGTCTCCTCGGATAAAGGCTTCCCC
ATCAATGTGTATGGCACTATTATCGCTAGAGACAGCATCGACCACAAGTGCATGTACCTCTTTAACCGCACCGGGGACAA
TTGCCAACCTATCAAGTCTATGGTACGTACGTCTTTGCTTCAAAATCACTGCTTATGTGCATGCCTCTTGATTTTATTTA
GTTTGTAACTCTATTGTATATTCCGTTGCAGGTTTTATTGGTATTTGGATTTTCTTAATCTAATATTTTGAGCTATTGCT
TTTCACAGGATGAAAATTTGATCTTAACTGGCCCAGGTCGAGGTCTGGTATTACTTGATTTCATATATCTGGAGATTGAT
CTTAAAATCAAGCTTGGCGAGGAGCCTCTAGGCGAGCAAATCAGCAAGGGTTTGCTTATGATTGATGGACGAGTTCTGCC
TAGAGACAAAAAGGTTGCTGTTGCACATCAAATGCTTGAAAGCTGGTTTAGTATTGTGGAGGTGAGGTATGCAACTCTTC
TTAATGCGGCCGAGAGTACCTTTGAGATCAAGTTACTCGAGGGACGTTTCTATGGAAAGATCATGGCTGGCATCGAGGGC
ATCGAGCCTAGGATTGTGATTTATAATAGTGACGAAGATGGTGTGATGTCTTGTGAAGACCGTGCAGTTATCACGCTGCG
GCGGCGTGTCATGACCCTCCGTCTGAATGGTATGCTCACATTTGGCTTTGCAGTCCCTGGTGGTGGTGCTGTTGCT---A
CTAGACAATGGAACGTTGAATTCACACCACGACACCGTGGTGAAGATAAAAAGGATATCTCTTGTGGTACTGCCAAGCTT
CAAGTGAAGGTCTTCTGGTCCATGCTGGACTATAGGC-------CGTATATCCTGTAGTAACATGAGAAACTAAGTTGTT
-GTGTAATGATGTGAGGTTTGTGTTATTATGCTTCAAAATGATTTAA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>SNPs
----------------------------------------S-S---------------S---------------------
----------------------------------S------------S------------S------S------------
----------------S----------------------S-----------S--S-----S---SSS--SS---------
--------------------------------------------------------------------------------
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-S------------------------------------------------------------------------------
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----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-----SSSSSS---------------------------------------------------------------------
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------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------S---------------------------------------------S--
---------------------------S----------------------------------------------------
-------------------------------------------------------------S-S----------------
------------------S-----------------------------S---S---------------------------
---S------------------------------------------------------------------------SSS-
---------------------------------------------------------------------S-----S----
-------------------------------------SSSSSSS----------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_2331
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GGCCAGAAAC
TAAAAGCCGTG---------------------------------------------------------------------
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>reverse_9792
--------------------------------------------------------------------------------
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-------------------------------ACGAGCAAATCAGCAAGGGT-----------------------------
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>forward_9379
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---------------------------------------------------------------------------CAAGA
GGTCTGTACATGGTTTGAT-------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_10831
--------------------------------------------------------------------------------
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------------------------------TGCTGCCGAAAAGCACTAGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
