>input_sequence_39185
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--ACCGACCTGACCTCGCCGCCGTTCTCCGATTCTCCGCTCGCCTGCTCTGC-----TCCGCCGCCTCTCTGGTACGCCC
TCGGCTCGATCTCAAAATGTCTCTCAAGCTTCCCTGCGTACCCTCCGCC----------GGACTTGGAACTGCCTCCGCA
AGTCCGACGAAGGGAGATTCTAGGTCTCTGCGGGGACTTGGATTAGGATATGTTC---TTTTCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTTTCGGGAAGGGATTGGGTCT
AATGACTGAGCGAGTTCTTTGAGTCAGAGGTAGAGCATCAGATTCGCAAGGGGAGTAACCGCCAGCATGCCGTCTTAGGA
TCGTTTTGCCTCTCCTTTCTGGCGATTTTGGAGTGGGGAAGGGGAATTTATGT---------------------------
------------------GGCTGGTTTTGATACCGGAAGTTTGGATTTGCAAGTCA---AGGGGGTGATTGAAG---TAG
AATAGTGGACGGCAGCAATAACATCTCCACTGGAGTTCTAGAGGATCAGGTTCAGTAGCTGAACATGTGCATAACCGGAA
T-----------------GAGCTTTTGTTTTTACTGAGTTTCAAGAACCAAGATGTGTGTATTCTTACCTTTTGTTTTAG
GCATTACCTTACCGCATTGTGGTATCAATGCGTTTCAGTGCCTTAAGCTTACTGCTTAGCAGATATAGGAATC----TGC
TCTGTTCCTTCGGATTCTG--CTTCTAGGGCACGGGTGCATACGAGAAA--------GACAGAGATCGGTAGGCCTTTCG
TTGCTTGGCTGTCGACGGTATAGTATATGCTTGTGAGGAAGAATGCTGCTTTATGTGTTCTATTCATGCCTGTTTCCTGT
TTTATTTATGGTCCATGTGTTTCGTCAGATGATTGCTCCATTTGTTCTGACATAGGCAGGCAAACGGACTA-TTTGCCTT
TGAACTGGCTGGGTTAATGTTA-TACAACCTATGTGCGAATATTACTTAGTAGTATTCCCGGAAAAAAAAACAATATTAC
TTAGTAGTAATGAGATGCATAGGTTAATTATTCAGTTGCTGGTTCTTGCAGTATATG-TTCCGCACCTAGT---------
-TTATT-------TAAATTATATGAAGTTTAGAAATCGTCACAAAAACACTGATATTCTCATAGACAGAACAACGTCAGC
TTTCAGATTCCTTCTATTAAGATGGGTCGTTAGTGTTGGGGAATCAGGACTTGGC-------------------------
GGCTATGTATGACCTATGAACAAACATTGAAAAGTTTCTGCTGTTGCCATCATGCCATGTTCACAATG---TACTTATTA
TAGCTCATAGCATTCTTTGTGGCGAAACGAATAAAATGCAAATGAAGGCCAAAAGCTACGGCAGAAGTGATTTTCAGTTT
CTGTTGGGGGGCTTTTACAGGAAAAA-AACACACAGGTGGCACTGAATAATAGACAAGGATGGCTTCTACTGGCGTGAAA
GATTTCTACCGGCAGAAGAAGAAAGGAGGTGTTGGCAAAACTTCAGCATCTTCTAAGAAGAAAACACAGAATTACACTGG
AGGGGCCTCTGTTGGGGCCTCAAATAAGGCTCAGACAGCAGCACTAATTTCTCACGGATCCTTAGACCTCAGAGGTACCC
-GCCGGAGAGATTGTTGTGTGCACAGTTTAAACTTGCCTGCGCTTTTCGTTTACAAACCATGACTTTTTGTTTATGCCGC
TGGTGC------TGCAGATGATTTCAGTGAGCAAGAGGAGCAGCTGCGGCAGTTTGACATGGACATGAAGTTTGGCCCGT
GCATCGGTGTCAACCGGCTTCAGCGCTGGGAGCGTGCTTCCGCCATGGGCCTCCAGCCACCGCCCCACCTTCGTGATCTC
CTAGCGCGCGCCTCCTCCGGAAACAACCGCAACAACGGCGGCCCCTCCCCTGAATGCCTCTGGGAGGGTAAGATCTAGAA
TCAAATTTCTTCCGCCGCAAGTGCTCCTTGGCAACCTAGCATGGCTTGCCTACTGT-----------------AGTCTGA
AACTC-TGAGCCCGTTTTACCACGCGGAACTCCTGCTGTTGCACCGTATCCTTGGTT-GTTTGCTTATCAGATGTTGCTA
CCTCAACTCCTGCGAGTGTCATCTTCAGTTTGCCC---------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>chr5B_1_TraesCS5B01G307200
TAGAAAATAGTAGCACATGGCAGTATTGCTGTTTTTTCAAAGGAATATCAACCAGTTGGGAGAAAATTTAGATGTAGTTT
TTTTACATGATGTTAGTTTACTCTCTTTTTTACCATGAGGTCGAGAACAGATGAATGAAATAAAAATTATGAGAATACTC
TGACTTAAAGGTGTGAAAAGGTGAATAAATCGAACTGATTTTTCCCTTTTTTAAAACAACTCCCTCATTCTCATAATATA
AGATGTTATTACAAGCAATATTTGTGCTACTGTGATTTCAAGTGAAGAGCAAAAAAAAAGTTTCCACTAGAAAGCGAAAA
TATCCTTTTCAAAATTAGATGATAATTTTCCCACAAAAAAAAAGATGATAATTTTATCAAACATAGGTGCTTTAATTTTA
ATTTAACGACTTAGTATTGTGATTATACATACCAATGTCACATGCAAAGCACGTACAAATTACTAGTTGTTAAAGCAGGG
CATCTATCTCATTACGATACATGAACGTTTTCTCCAAACAAAAATATATTTTTTAAATGTATGAAAGTTTTTTTAAGTGC
ATGGAAATTTTTATTTCGACATACATGAACATATTTTCTACAACATATGGATATTTTTTCATCTACTAGGGCATTTAAAA
AGATCCATGGATATTTTATGCATAGGTGAACATTTTTGGTACACACTTTTTTCTGAAAATACATGATTGATTTTTTAATT
TAAGTCACATTATTTGTTCCTACATTTTAATACAT-----------------------------ATTACATACATAAGTG
AAAATAAATACTATTTGAAGACTT-----AAAAAATAGAAATA-AATACCT-ATAGTGGGCTGAACCAAGGCCGGTCCAT
CCAT---GTAGGATGGATCCCACGTAAAAGAAAATTGGCTCTAGCTGGGCTAACAAGGCCTACGTTACAGTTTTTAAGGC
CACGATACAAAACAATG---TCAAACACGAGACGAGAGAGGCGAAGAAAAATAAAACGAAAGAGGCGAAAACCTGATTCG
CTACCGACCTGACCTCGCCGCCGTTCTCCGATTCTCCGCTCGCCTGCTCTGC-----TCCGCCGCCTCTCTGGTACGCCC
TCGGCTCGATCTCAAAATGTCTCTCAAGCTTCCCTGCGTACCCTCCGCC----------GGACTTGGAACTGCCTCCGCA
AGTCCGACGAAGGGAGATTCTAGGTCTCTGCGGGGACTTGGATTAGGATATGTTC---TTTTCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTTTCGGGAAGGGATTGGGTCT
AATGACTGAGCGAGTTCTTTGAGTCAGAGGTAGAGCATCAGATTCGCAAGGGGAGTAACCGCCAGCATGCCGTCTTAGGA
TCGTTTTGCCTCTCCTTTCTGGCGATTTTGGAGTGGGGAAGGGGAATTTATGT---------------------------
------------------GGCTGGTTTTGATACCGGAAGTTTGGATTTGCAAGTCA---AGGGGGTGATTGAAG---TAG
AATAGTGGACGGCAGCAATAACATCTCCACTGGAGTTCTAGAGGATCAGGTTCAGTAGCTGAACATGTGCATAACCGGAA
T-----------------GAGCTTTTGTTTTTACTGAGTTTCAAGAACCAAGATGTGTGTATTCTTACCTTTTGTTTTAG
GCATTACCTTACCGCATTGTGGTATCAATGCGTTTCAGTGCCTTAAGCTTACTGCTTAGCAGATATAGGAATC----TGC
TCTGTTCCTTCGGATTCTG--CTTCTAGGGCACGGGTGCATACGAGAAA--------GACAGAGATCGGTAGGCCTTTCG
TTGCTTGGCTGTCGACGGTATAGTATATGCTTGTGAGGAAGAATGCTGCTTTATGTGTTCTATTCATGCCTGTTTCCTGT
TTTATTTATGGTCCATGTGTTTCGTCAGATGATTGCTCCATTTGTTCTGACATAGGCAGGCAAACGGACTA-TTTGCCTT
TGAACTGGCTGGGTTAATGTTA-TACAACCTATGTGCGAATATTACTTAGTAGTATTCCCGGAAAAAAAAACAATATTAC
TTAGTAGTAATGAGATGCATAGGTTAATTATTCAGTTGCTGGTTCTTGCAGTATATG-TTCCGCACCTAGT---------
-TTATT-------TAAATTATATGAAGTTTAGAAATCGTCACAAAAACACTGATATTCTCATAGACAGAACAACGTCAGC
TTTCAGATTCCTTCTATTAAGATGGGTCGTTAGTGTTGGGGAATCAGGACTTGGC-------------------------
GGCTATGTATGACCTATGAACAAACATTGAAAAGTTTCTGCTGTTGCCATCATGCCATGTTCACAATG---TACTTATTA
TAGCTCATAGCATTCTTTGTGGCGAAACGAATAAAATGCAAATGAAGGCCAAAAGCTACGGCAGAAGTGATTTTCAGTTT
CTGTTGGGGGGCTTTTACAGGAAAAA-AACACACAGGTGGCACTGAATAATAGACAAGGATGGCTTCTACTGGCGTGAAA
GATTTCTACCGGCAGAAGAAGAAAGGAGGTGTTGGCAAAACTTCAGCATCTTCTAAGAAGAAAACACAGAATTACACTGG
AGGGGCCTCTGTTGGGGCCTCAAATAAGGCTCAGACAGCAGCACTAATTTCTCACGGATCCTTAGACCTCAGAGGTACCC
-GCCGGAGAGATTGTTGTGTGCACAGTTTAAACTTGCCTGCGCTTTTCGTTTACAAACCATGACTTTTTGTTTATGCCGC
TGGTGC------TGCAGATGATTTCAGTGAGCAAGAGGAGCAGCTGCGGCAGTTTGACATGGACATGAAGTTTGGCCCGT
GCATCGGTGTCAACCGGCTTCAGCGCTGGGAGCGTGCTTCCGCCATGGGCCTCCAGCCACCGCCCCACCTTCGTGATCTC
CTAGCGCGCGCCTCCTCCGGAAACAACCGCAACAACGGCGGCCCCTCCCCTGAATGCCTCTGGGAGGGTAAGATCTAGAA
TCAAATTTCTTCCGCCGCAAGTGCTCCTTGGCAACCTAGCATGGCTTGCCTACTGT-----------------AGTCTGA
AACTC-TGAGCCCGTTTTACCACGCGGAACTCCTGCTGTTGCACCGTATCCTTGGTT-GTTTGCTTATCAGATGTTGCTA
CCTCAACTCCTGCGAGTGTCATCTTCAGTTTGCCCCGCGCAAGTTGCTTAATTGTGTCA--TTTTTTTCTTCAAAATTAT
GCCATTCTCAAGAGGATTTAATGAACAGGTCCGTTTCTGTCTGATTCTTGTCCAGTAAGTACGGTTTTTTTTTTGTCTTG
CTCGTTTGTCGGGCGAACCAAACAACCGATTCATGGGCCATGACGGTGAAGTGCATATACAGAATCTAAAACCATGACCG
TGCA---GAGGAACTCTGC--------CACTGTAGCGTGGCTTTGTACAT-----AGGGTAGAGCTGAGCAGCACAGCTT
GTGCCTTGGTACATTTCATTGGTACAACGCCGAATGATACGGGTGCCTCCGTGTCCGATGGGAT-GAGACGCCATGCCAG
GTACATTGCATAAGTACAATGGCGAATGATACGGGTGTCTCCGTGTTCGATGGAGTGA-GACGCCGTGCGAG-----GTA
CATACACTAGAATGTTTGACTCAGAGGCACTGCTTTGTCTTGGAGCGCTGGGCTAGAGCATGTGTTCCTCGACACTT---
GTCGTCAGCTACAGCGTCCAAGCCACTCCGGTGACTCGGCCTCTGTTTTTGTTCGTGTTCCTTGTGAAGAAACGATGTGA
G---TTTTGTATACAAGTCTTTCCCAATTTCTCCGTTACGAGTACTTGTCACCAAGGTCCCATCGATCTTCCGTATCTGC
TTCTCTTGATCTTCCGTTGGCAAATTT-TTTAAAAGAAGGTTGAAACTCTAAAGATGCACACATCCATCTTTATTTAACA
AAATCAGATAAAACAAATGCATGGATCAATCTAAATCCACTTTCGTGATGACATATGTTGCTACACCTACAAATTTGATG
ATGTGCCGTCATCTCACACCAACACACACCATCTAATCCAGTAGCCTCGCTAAGCGTCCCACGGT-GAGCCGAGAGCATC
AACCGGTCTAACAGACCCTCAGCACGCACTGCATGCGCACGCTCTAGAATCTGTCGACGCCATCTTTCGCCGCTCCATCT
TCAGGAGAGATCAACACATTGACCTTGC
>chr5D_599
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TACAACATATGGATAATTTTTCATGTACTAAGGTATTTAAAA
A-ATCCATGGATATTTTATGCATAGATAAACATTTTTGGTATACACTTTTTTATGGAAATACATGATTTTTTA---AATT
TAAGTCACATTGTTTGTTCTTACCTTGTAATACAGATTACATTTTTTTTTGAGGGATAATACAGATTACATAGATAAGTA
AAAATAAACATTATTTGAAGACTT----AAAAAAAGAAAAACA-AATACCTGATAATGGGCTGAACCAAGGCCGGGCCAT
CCATCACGATGCGACTCT-----GTAAAAGAAAATGGGCTCTAGCTGGGCTAACAAGGCCTACGTTACAGTTTTGAAGGC
CACGATACAAAATAATGTCATCAAACACGAGACGAGAGAGGCGAAGAAAAAGAAAACGAAAGAGGCGAAAACCTGATTCG
CTACCGACCTGACCTCGCCGCCGTTCTCCGATTCTCCGCTCGCCTGCTCTGCTCTGCCCCGCCGCCTCTCCGGTACGCCC
TCGGCTCGATCTCGAAAAGTCTCTCAAGCTTCCCTGCGTACCCTCCGCCAACCACCGCCGGACTTGGAACTGCCTCCGCA
AGTCCGACGAAGGGAGATTCTAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTCGGGAAGGGATTGGGTCC
GATGACTGAGCGAGCTCTTTGAGCTGGAGGTTGAGCGTCAGATTCGCAAGGGGAGTGACCGCGAGCATGCCGTCTTAGTA
TCGTTTTGCCTCTCCTTTTTGGCGATTTTGGAGTGGGGAAGGGGAATTTATGTAACCACATTTGCTCGTCGCGTGTAAGA
AAGGAGTCTGCATTATGTGGCTGGTTCTGATACTGGAAGTTTGGATTTGTAAGTCA---AGGGGGTGATGGAAGTACTAG
AATAGAGGACGGCACCAATAACATCTCCACTGGAGTTTTGGAGGATCAGGTTCAGTAGCTCAACATGTGCGTAACCGGAA
CGAGTTTTTGTTTTTACGGAG-----------------TTTCAAGAACCAAGATATGTGTATTCTTACCTTTTGTTTTAG
GCATTACC-----GCATTGTGGTGTCAATGCGTTTCACTGCCTTAAGCTTACTGCTTAGCATATATAGAAAAAAATATGC
TCTGTTCCTTCGGATTCTGGGCTTCTAGGGCATGGGTGCGTGCGAAGAGCTTGAAATGACAGAGATCGGCAGGCCTTTTG
TTGTTTGGCTGTCGACGGTATAGTGTGTGCTTGTGAGGAAGGATATTGCTTTATGTGTTCTATTCATGCCTGTTTCCTGT
TTTATTCATGGTCCATGTTTTCTTGG-GATGATTGCTCCATTTGTTCTGACGTAGGCAGGCAAATGGACTATTTTGCTTT
TGAACTGGCCGGGTTAATGTTAGTACAACCTATGTGCAAATATTACTTGGTAGTA-------------------------
--------AATGAGATGCATAGATTAATTATTCAGTTGCTGGTTCTTGCAGTATATAATTTCGCACCTAGTAGTTTATTC
TTTATTGTAGTCTTAAATCATATGACGTTCAGAAATCGTCACAGAAACACTGATATTCTCATAGACAGAACAACGTCAGC
TTTCAGATTCCTTCTATTAAGATGGGTCGTTAGTGTTGGGGAATCAGGACTTTTTCGATAAAGGGGTGGAATCAGGACTT
GGCTATGTATGACCTATGAACAAACATTGAAAAGTTTCTGCTGTTGCCATCATGCCATGTTCACATTGTACTACTTATTA
TAGCTCATAGCATTCTTTGTGGCGAAATGAATAAAATGCAAATGAAGGCCAAATGCTACAGCAGAAGTGATTTTCAGTTT
CTGTTGGGGGGCTTTTACAGGGAAAAGAAAACACAGGCAGTACTGAGTAATAGACAAGGATGGCTTCTACTGGCGTGAAA
GATTTCTACCGGCAGAAGAAGAAAGGAGGTGTCGGCAAAACTTCAGCATCTTCCAAGAAGAAAACACAGAATTACACTGG
AGGGGCCTCTGTTGGGGCCTCGAATAAGGCTCAGACAGCAGCACTAATTTCTCACGGATCCTTAGACCTCAAAGGTACCC
-GCTGGAGAGATTGTTATGTGCACAGTTTAAACTTGCCAGCGCTTTTTGTTTACAAGCCATGACTTTT-GTTTATGATGC
TGCTGCTGCTGCTGCAGATGATTTCAGTGAGCAAGAGGAGCAGCTGCGGCAGTTTGACATGGACATGAAGTTTGGCCCGT
GCATCGGTGTCAACCGGCTTCAGCGCTGGGAGCGTGCTTCCGCCATGGGCCTCCAGCCACCGCCCCACCTTCGTGATCTC
CTAGCGCGCGCCTCCTCCGGAAACAACCGCAACAACGGCGGCCCCTCCCCTGAGTGCCTCTGGGAGGGTAAGATCTAGAA
TCAAATTTCTTCCG-----------------CCACCTGTCACGGCTTGCCTACTGTTTGGGACCAGGTAGTTTAGTCTGA
GACTCTTGAGACCGTTTTACTGCGTGGAACTCTTGCTGCTGTACCAAATCCTTGTCTGTTTTCCTTATCAGATGTTGCTA
CTTCCACTC-TGCCAGTGTTATCTTCAGTTTACCCTGCGCGAGTTGCGTGCCTCTTTTTTTCC-----CTTCAGAATTAT
GCCATCCTCGAGAGGATTTAATGGACAGGCCCGTTTCTGTCTGATTCTTGTCCAGTAAGTACGGTTTTTTTTTTGGCTTG
CTCGTTTGTCGGGCGAACCAAACAACAAGTTCATGGGCCATTACGGTGAAGTAC--ATACAGCATCTAAAACCATGACCG
TGGTGCGGAGGAACTCGGTCACTGTAGCACTGTAGCGTGGCTTTGCACAT-----AGGGTAGAGC-----AGCATAGCTT
GTGCCTTGGTACATTTCATAGGTACAATGCCGAATGATACGGGTGCCTCCGTGTTCGATGGGGACGAGACGCCGTGCCAG
GTACATTGCATAGGCACAACGCCGAATGATACGGGTGCCTCCGTGTTCGATGGGGACGTGACGCCGTGCCAGGTACAGTA
CATACACTAGCATGTTTGACTCGGAGGCACTGCTTTGTCTTGGAGCGCTGGGCTAGAGCATGTGTTCCTCGACACTTGTC
GTCGTCAGCTACAGCGTCCAGGCCACTCCGGTGACTCGGCCTCTGTTTTTGTTCGTGTTCCTTGTGAAGAAACGACGTGA
TTTCTTTTGTATACAAGTCTTTCCCAATTTCTCCGTTACGAGTACTTGTCACCAAGGTCCCATAG--CTTCCGTATATGC
TTCTCTTGATCTTCCGTTAGCAAAAAAATTTAAAAGAAGGTTGAAAATCTAGAGATGCACAGATTCAACTTTATTTAACA
AAATCGGATAAAACAAATACATGGATCAATCTAAATCCACCTTCCTGACGACATATGTCGCTACATCTACAAATTTGATG
ATGTGCCCTGACCTCGCACCAACACACATCATCTAATCCGGTAGCCTTGCTAAGCCGTCCGACGGCGAGCCGAGAGCACC
AACCGGTCTAGCAGATCCTCAGCATGCATCGCATGCGCACGCTCTAGAATTCGTCGACGCCATCTTTCGTCGCCCCATCT
TCAGGAGGGATCAACGCATTGACCTTGC
>chr5A_756
--------------------------------------------------------------------------------
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----------------------------------------------------------------ATTAGATAGATAAGTA
GAAATAAATATTATTTAAAGACTTGAAAAAAAAAGGAAAAAACCAATACCTGATATTGGGCTGAACCAAGGCCGGGCCAT
CCAT---GATGCGACTCT-----GTAAAAAAAAATCGGCTCCAGCTGGGCTAAGAAGGCCTACGTTACAGCTTTTAAGGC
CACGATACAAAATAATG---TCAAACACGACACGAGAGAAGCGAAGAAAAAGAAAACGAAAGAGGCGAAAACCTGATTCG
CTACCGACCTGACCTCGCCGCCGGTCTCCGATTCTCCGCTCGCCTGCTCTGCTCTGCTCCGCCGCCTCTCCGGTACGCCC
TCGGCTCGATCTCAGAAAGTCTCTCAAGCTTCCCTGCGTACCCTCCGCCAACCTCCGCCGGACTTGGAACTGCCTCCGCA
AGTCCGACGAAGG-----------TCTCTGCGGGGACTGGGATTGGGATAGTTTTTTTTTTTCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTTTCGGGAAGGGATTGGGTCT
GATGACTGAGCGAGCTCTTTGAGTTGGAGGTAGAGCGTCAGATTAGCAAGGGGAGTGACCGCCAGCATGCCGTCTTAGCA
TCGTTTTGCCCCTCCTTTTTGGCGATTTTGGAGCGGGTAAGGGGAATTTATGTAACCACATCTGTTCGTCGCGTGTAAGA
CAGGAGTCTGCATTATGTGGCTGGTTGTGATACCGGAAGTTTGGATTTTTAAGTCAACAAGGGGGTGATGGAGG---TAG
AATAGAGGACGGCGCCAATAACATCTCCACTGGAGTTTTGGAGGATCAGGTTCAGTAGCTGAACATGTGCATAGCCGGAA
T-----------------GAG-----------------TCTCAAGAACCAAGATGTGTGTATTCTTACCTTTTGTTTTAG
GCGTGACC-----GCATTGTGGTATCAATGCATTTCAGTGCCTTAAGCTTACTGCTTAGCATACATAGAAAAAATCTGT-
TCTGTTCCTTCGGATTCTG--CTTCTAGTGCACGGGTGCATACGAAGAGCTTGAAATGACAGAGATCGGTAGGCCTTTCG
TTGTTTGGCTGTCGACGGTATAGTATATGGTTGTGAGGAAGGATATTGCTTTGTGTGTTCTATTCATGCCTGTTACCTGT
TTTATTTATGGTCCATGGTTTCGC------GATTGCTCCATTTGTTCTGACTTAGGCAGGCGAGCGGACTATTTTGCTTT
TGAACTGGCTGGGTTAATGTTAGTACAACCTATGTGCAAATATCACTTAGTAGTA-------------------------
--------AATGAGATGCATATATTAATTATTCAGTTGCTGGTTCTTGCAGTATATG-TTTCGCACCTAGT---------
-TTATTGTAGTCTTAAATCATATGACGTTTACAAATCGTCATAGAAATATTCATATTCTCATAGACAGAACAACGTCAGC
TTTCAGATTCCTTCTATTAAGATGGGTCGTTAGTGTTGGGGAGTCAGGACTTGGC-------------------------
GGCTATGTAGGACCTATGAACAAACATTGAAAAGTTTCTGCTGTTGCCATCATGCCATGTTGACATTG---TACTTATTA
TAGCTGATAGCATTCTTTGTGGCGAAATGAATAAAATGCAAATGAAGGCCAAAAGCTACAGCAGAAGTGATTTTCAGTTT
CTGTTGGGGGGCTTTTACAGGAAAAGGAAAAACAGT--AGTACTGAATAATAGACAAGGATGGCTTCTACTGGCGTGAAA
GATTTCTACCGGCAGAAGAAGAAAGGAGGTGCCGGCAAAACTTCAGCATCTTCCAAGAAGAAAACACAGAATTACACTGG
AGGGGCCTCTGTTGGGGCTTCAAATAAGGCTCAGACAGCAGCACTAATTTCTCACGGATCCTTAGACCTCAAAGGTACTT
TGCTGGAGAGATTGTCATGTGCACAGTGGAAACTTGCCCATGCTTTTTGTTTACAAACCATAATTTTT-GCTTATGACCA
TATTGT------TGCAGATGATTTCAGTGAGCAAGAGGAGCAGCTGCGGCAGTTTGACATGGACATGAAGTTTGGCCCAT
GCATCGGTGTCAACCGGCTTCAGCGCTGGGAGCGTGCTTCCGCCATGGGCCTCCAGCCACCGCCCCACCTTCATGATCTC
CTAGCGCGTGCCTCCTCCGGAAACAACCGCAACAACGGCGGCCCCTCCCCTGAGTGCCTCTGGGAGGGTAAGATCTAGAA
TCAAGTTTCTTCCGCCAAGAGTGTTCCATGGCAACCTAGCAAGGCTTGCCTACTGTTTGGGACCATGTAGTTTAGTCTGA
AAC-----------TTTTACCGCGCGAAACTCTCGCTGTTGTACTGAATCCTTGTCTGGTTTCCTTATCAGATGTTGCTA
CTTCCACTCTTGCCAGTGTCATCTTCAGTTTGCCCCGCGCAAGTTGCTTAATTGTGCCTTTTTTTCTTCTTCAAAATTAT
GCCATCCTCGAGAGGATTTAATGGGCAGGTCCGTTTCTGTCTGATTCTTGTCCAGTAAGTACGGTTTTTTTGGT---TTG
CTCGTTTGTCAGGCGAACCAAACAACAAATTCATGGGCCATGACGGTGAAGTAC--ACACAGAATTTAAAACCATGACCG
---A---GAGGAACTCTGTCACTGTAGCACTGTAGCGTGACTTTGCACATAGGGAAGAGTTGAGC-----AGCACAGCTC
GTGCCTTGGTACATTTC---------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S--------S-----S--S--------
-S-----------------------S-S-------------S----------S--S------------SS--SSSS----
-----------S-------S---S--S-------S-------------------------------------S------S
----------S------------------------S-S---S-------------S-------------------S----
--------SS-SSSSSS-SSSSS------------S--------------------------------------------
------------S--------------------------------------S----------------------------
----------------------------------------------------------------------S---------
-----------------S--------------------------------------------------------------
--------------------------------------S-----S-----SS--S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------S---------SS----------S-------------------S---------------------S-
------------------S-------------------------------------------------------------
--------------------------S----------------------S-------------------S----------
-----S--------S----------------------S-S----------------------------------------
---------------------SSSSSSSSSSSSSSSSS------------------------------------------
--------SSSSS------------------------------------------------S------S--SS-------
---------------------------------------------SS-S-------------------------------
---S-------------------------------------S--SS----------------------------------
------------------S--SSSSSS------------------------S-------------------------S--
-------------------------------------S-----------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS--------------S-------------------------------------S-------------------
------------------S------S-----------------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
---------------------------S-------------------------------S--------------------
-----------------------------S-------SS-S---------------------------------------
--------------------------------S--------------------S--------------------------
-----------------------------------------------------------------------S--------
---S------------S---------------------S--------S--------------------S-------S---
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
----------------SSS----S---S-------------S--------------------------------------
----------S----------S----------S--------S----S-------SS------S-----------------
-S--S----S---S--------------------------------------------S------S--------------
-----S---S-------------S---------------------------------------------------S----
--------------------------SS------------------------S-SS------------------------
--S---------------S--------------------------S-------------------SSSSS----------
-------------------S-------S--------------------------S-------SS---------S------
------------S-S----S-S---------------S---------------S-SSS-----------S----------
----------S-----------S---------------------------------------------------------
--------------------S------------------------------------------------------S----
S--------------------------------------------------------------S-SS---------S---
------------------S-----SSS-------------------S----S---------S--S--S------------
-----S------------S---------------------S---S---S---------S------S--------------
-------S-S-S---S------------S----------S-------S-------SSS--SSS-S-------------S-
----------S----S--------S---SS--------------------SS-----------------S---S------
-------S-------S------------
>forward_454
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------ATGTCACATGCAAAGCACGT--------------------------
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>reverse_2049
--------------------------------------------------------------------------------
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------------------------------------------------AGACAGAGATCGGTAGGCCT------------
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----------------------------
>forward_1521
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------TCGGGAAGGGATTGGGTCT
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>reverse_3308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------TTGGCAACCTAGCATGGCTT---------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_1750
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TGCAAGTCAAGGGGGTGATT----------
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----------------------------
>reverse_3860
--------------------------------------------------------------------------------
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-------------------TGGCGAATGATACGGGTGTC-----------------------------------------
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