>input_sequence_39117
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-----------------------------------------ATGGTCCCAACCCAACTATCTGACCAACCGTGACCACTT
CTCAAAA--------AAATAACAACGGTGTGTATGTGTGTATGTGATGTGTATGTAAATATGTCTTTGAAGCTTTGGTTC
CATTATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATATATACACAATTTAATGTGTTTGTTCACTCGCTTCAGTCTTTGTGTAC
TCCCTCCGTTGCTAA-----ATATAAATCTTTTTAGATATTCCAATATATATTTTTGTGGGTCTTTAGATATTCTCCAAT
ATGACTACATACGGATATATATAGGCATAGCTTAGAGTGTAGGTTCATTCATTTTGCTCTGTATGTAGTTCATATTGAAA
TATCT--AAAAAAGACTTGTATTTAGAAAGAGTAATTCATATTAATAAAATATTCAGAACATCTTATAACAGTGATCGGA
GGGAGGAGTATATAACATGAGTTTCATGGTAGGCACAAAGAACGTAGGTGCGGGTGCGGGTGCGGAACACGGAGAATGAG
GGTGACGAGGGCTGAGCCGGTGCTCGTGCACGCTGCCGGTGACGTTCCTGCCGCCGACGAGTACTACTTCCTCTCCAACC
TCGACCAGAATGTGGCAGTGCTCATGAAAACCGTGCACGTCTTCAGCCCGTCCCGCGCCCGCGTCGACGCGGCCGCCGTG
ATCACGGACGCCCTGGGCAGGGTGCTCGTGCACTACTATCCGTTCCAGGGGAGCCTGGTGGTCAGCACCGACGACGGGAG
GCTCTCGGTCCGGAACGACCGCCGTGGCGTGCCTTTCGTCGTCGCGGACGCCGACTGCGAGCTCAAGGAGGTCGGGGACG
TCGTACTGTCGGCACCCAACGCCGCCGCGGTTCAGGGGCAGCTCGTGTTCGTCGGCCGCAGCAGCAGCAACTCCGAGGAC
AAGGAAGATGACGAGCTGAGGGCGCCTCTACTGAGCGTGCAGGTCACCAGGTTCAGGTGTGGCGGCTTCGTGCTCGGGCT
CGCCATGAACCATTGCCTGGCGGACGGCGTCGCCGCGGCGGAGTTCCTCCGCTCCTGGGGCGAGATGGCCCGCGGCGGGC
CCCTCTCCTCCCCGCCCTTCCTCGACCGCACCGTGCTGCGCGCCAGGACGAGCCCCACGGTCGCCTTCCCGCACGAGGAG
TTCGCAGAGATGGAGGACGTGTCCAGCCTCGCCTGCCTCCGCGAGGAACCGCGGGTGCACCGGGCCTTCGCCATCGACGC
CGACGGGCTCGCGCGGCTGAAGCGGCAGGCGTGCGCGAGCTCCACCTTCGTGGCGCTGACGGCGTTCGTCTGGCGCGCGA
CGTTGCGCGCCATGAGGATGCGCCCCGAGCAGAAGAGCAAGCTCATGTTCGCCGTCGACGGCAGGCGGCGCGTCGACCCG
CCGCTGCCTCGCGGTTTCTGCGGGAACG-CGTCGTCTTCGCCTGCTGCGTGTCCACTGCCGGCGACCTCCTCGGCGGGCC
GGTGTCCGCTGCGGCCCGGTGGATCCAGGACGCCATCAGGCGCACGGACGACGCGTTCGTCCGTTCGGCCATCGACTACG
TGCAAGTGGCCGGTGGCCGGGCGCCGTCGATGACGGCGACGACGCTGGTGACGGCGTGGAACCGTCTTGGGTTCCACGCG
GCCGATTTCGGGTGAGGCGAGGCCGCACAGTCTGGCCCCGCGGAGCTGCCGCGCGGGGAGGTGGTCATGTTTATGCGGGA
CGTGCGTGAGGGCAGCATCGTGGTGCTTCTTGGCCTGCCGCGGTCGTGCATGCAAGAGTTCCAAGACATGGTAGATTTGA
TCTGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>chr3B_1_TraesCS3B01G237300
GTTGATAAGAGAATGTGCTTACATTTTCCGTACTCTGAAAGCAGTCAAGATTTTATCTTGGGGATGTCGGGAATGGCGCA
GCAATGAAGCTCGTGGTTAATATGGTGATGGGGAGGTAAAGTGGAACCTCATTTATGTAGATCCTATGTATGGTCATGGA
GATTATCAAATCTTAGGTTTCACTGATCCTTGCGGTGAAACACTGCAGCATGATGGTCTCATTTGCAGAAGGGCTACTCC
TGAGTGAAAAAGTGGGGTTAGACTCGAATACTGTCGTCGAGGTAGCTTTACGGAAACAAGTATAATACTCTAACCTGCAA
TATGTCAAGAGAGTTTTTCATCTAACCCAGGGTGCACTGGTCGTCCAACAGGTTATTTCACAAGGTGCTATCAATGCTCC
CATGTTCTCCCTCAAGGGCCCTTCCATGGTTAAAGCTGCATACCCTACTGCCTTTCCCCTGAAACATCAGCAGAAGGTAA
GCAGAGCACTGAAAAAGAAAGCTGCA-TGTTGCACCTCGTCTTAATCTGATGCTAAGAAGAAACGCCTGACAGGATCTAA
GGCTGGCGCTGGCCCTGGCAGAATCGGTGTCCCAGCCCATTCCTACAGCTGCAGCTGCAAACGAGCTGTACAAGGTAGCA
AAATCGCTGGGCCTCGCCGACCACGACTTCTCCGCAGTCATTGAGGCGCTCAAGGCCAAAGTGCAGAGCTCGCAGCACTA
GATATTGTTTCTTCAGCCGGCCAAGTTTGAGTGTGGCATTCAAATGTATTCGCCCATCTCGTCTCTTTTGCAGACATATA
AATGTGCTTGTTTTGCGCAAATATATATATATAAATGTGCTTGTTTTACAGGCAGAGTGTATACAGCAATGTAAAATGAA
TATATACAGAATATCAACCCATGCAAAGGGGGAAAGGGTATCGATATTTTTGGTATGTTTGTAATTAAGTTTGGTTATCG
CAGTCAGCTGTTAGAAATGGTAAAGATAACCTAGCAAATTTATGGTCCCAACCCAACTATCTGACCAACCGTGACCACTT
CTCAAAA--------AAATAACAACGGTGTGTATGTGTGTATGTGATGTGTATGTAAATATGTCTTTGAAGCTTTGGTTC
CATTATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATATATACACAATTTAATGTGTTTGTTCACTCGCTTCAGTCTTTGTGTAC
TCCCTCCGTTGCTAA-----ATATAAATCTTTTTAGATATTCCAATATATATTTTTGTGGGTCTTTAGATATTCTCCAAT
ATGACTACATACGGATATATATAGGCATAGCTTAGAGTGTAGGTTCATTCATTTTGCTCTGTATGTAGTTCATATTGAAA
TATCT--AAAAAAGACTTGTATTTAGAAAGAGTAATTCATATTAATAAAATATTCAGAACATCTTATAACAGTGATCGGA
GGGAGGAGTATATAACATGAGTTTCATGGTAGGCACAAAGAACGTAGGTGCGGGTGCGGGTGCGGAACACGGAGAATGAG
GGTGACGAGGGCTGAGCCGGTGCTCGTGCACGCTGCCGGTGACGTTCCTGCCGCCGACGAGTACTACTTCCTCTCCAACC
TCGACCAGAATGTGGCAGTGCTCATGAAAACCGTGCACGTCTTCAGCCCGTCCCGCGCCCGCGTCGACGCGGCCGCCGTG
ATCACGGACGCCCTGGGCAGGGTGCTCGTGCACTACTATCCGTTCCAGGGGAGCCTGGTGGTCAGCACCGACGACGGGAG
GCTCTCGGTCCGGAACGACCGCCGTGGCGTGCCTTTCGTCGTCGCGGACGCCGACTGCGAGCTCAAGGAGGTCGGGGACG
TCGTACTGTCGGCACCCAACGCCGCCGCGGTTCAGGGGCAGCTCGTGTTCGTCGGCCGCAGCAGCAGCAACTCCGAGGAC
AAGGAAGATGACGAGCTGAGGGCGCCTCTACTGAGCGTGCAGGTCACCAGGTTCAGGTGTGGCGGCTTCGTGCTCGGGCT
CGCCATGAACCATTGCCTGGCGGACGGCGTCGCCGCGGCGGAGTTCCTCCGCTCCTGGGGCGAGATGGCCCGCGGCGGGC
CCCTCTCCTCCCCGCCCTTCCTCGACCGCACCGTGCTGCGCGCCAGGACGAGCCCCACGGTCGCCTTCCCGCACGAGGAG
TTCGCAGAGATGGAGGACGTGTCCAGCCTCGCCTGCCTCCGCGAGGAACCGCGGGTGCACCGGGCCTTCGCCATCGACGC
CGACGGGCTCGCGCGGCTGAAGCGGCAGGCGTGCGCGAGCTCCACCTTCGTGGCGCTGACGGCGTTCGTCTGGCGCGCGA
CGTTGCGCGCCATGAGGATGCGCCCCGAGCAGAAGAGCAAGCTCATGTTCGCCGTCGACGGCAGGCGGCGCGTCGACCCG
CCGCTGCCTCGCGGTTTCTGCGGGAACG-CGTCGTCTTCGCCTGCTGCGTGTCCACTGCCGGCGACCTCCTCGGCGGGCC
GGTGTCCGCTGCGGCCCGGTGGATCCAGGACGCCATCAGGCGCACGGACGACGCGTTCGTCCGTTCGGCCATCGACTACG
TGCAAGTGGCCGGTGGCCGGGCGCCGTCGATGACGGCGACGACGCTGGTGACGGCGTGGAACCGTCTTGGGTTCCACGCG
GCCGATTTCGGGTGAGGCGAGGCCGCACAGTCTGGCCCCGCGGAGCTGCCGCGCGGGGAGGTGGTCATGTTTATGCGGGA
CGTGCGTGAGGGCAGCATCGTGGTGCTTCTTGGCCTGCCGCGGTCGTGCATGCAAGAGTTCCAAGACATGGTAGATTTGA
TCTGAAACT--------TTGGCCATTTTAGCTGCTCACAAGGCCTTCCTTCATAACGTGTGTATGCATGGGATCTCAATC
TCAGCGTTGCGGCTGATGAGCAAAATATTATTATTGCCAACTTTCATGACCAAACACGTGCATCGCACAAATACAA-GGC
AGATTTTAACGATAACAATTATTCAGATGTGAAGTTGTCAACAGCACAACTAGAGAAGTCACTTCAAACACTAGCT-ACA
TGTGCCTGCTACTATGTGTGAATTTTCCTCCATGTGTTTCTTTCTCTATCCACACCCCAAGCAACATCGATGTGTCCTCG
TGTTTGATGCAGCAGTGTAGCATATTCTTCCTGGGGGATACTCATCAGCTGACGGTTTGGCAGAACAACCTGCTAATTTG
GTGAAT-------------GCAAACCTGTGGATGCTAAGACCCGATACCGACAACTCCCTTGGCCTGCGCTGCCGCTTGT
TGTGCCGCCGCCGCCGCAGCAGCAGCCGCCGCGGCGGCTGGAGATGGGGGTGAAGCTGGCGTCTTCTGTGGGGCTTCAAC
AGCATGCCCCTGCGGCTGTTTGTTATCTACTTGGGCCAACAAGTTCTTTATTTGGGTTCCGCTCATGGTCTCATGCTCAA
GAAGTGCATTGGCTAGAGCATGGAGCTCCTTGTTGTGTTTGGTGAGGATAGCCTTTGCATTGTTGTATGCTTTCTCCAAG
AAATTCTTCACCTCCTCCTCAATTAGAAGCCTCGTTTCTGAGCTCATAGTCTTTCCGTCCTCTTCATAGTTGTATGAAAC
AAGACCCACCTGCTTGCTCATACCATACTGAGTAACCATTGCTCTTGCCATCAAAGTCGCTTGCTCAAAGTCGGATGAAG
CACCGGATGTCACCTCGCTATCCCCAAATATAAGCTCCTCTGCCACCCGTCCTCCCATGCACACATCCAATCTTGCTAGC
ATCTGTTTCCTTGACACGCTAGTCTCATCTTTGTCAGGGAGCTGAGCCACCATCCCAAGGGCCATCCC
>chr3D_1
GTTGATAAGAGAATGTGCTTACATTTTCCGTACTCTGAAAGCAGTCAAGATTTTATCTTGGGGATGTCGGGAATGGCGCA
GCAATGAAGCTCGTGGTTAATATGGTGATGGGGAGGTAAAGTGGAATCTCATTTATGTGGATCCTATGTATGGTCATGGA
GATTATCAAATCTTAGGTTTCACTGATCCTTGCGGCGAAACACTGCAGCATGATGGTCTCCTTTGCAGAAGGGCTACTCC
TGAGTGAAAAAGTGGGGTTAGACCCGAATACTGTCGTCGAGGTAGCTTTACGGGAACAAGTATAA-----TAACCTGCAA
TATGTCAAGAGAATTTTTCATCTAACACAGGGTGCACTGGTCGTCCAACAGGTTATTTCACAAGGTGCTATCAATGCTCC
CATGTTCTCCCTCAAGGGCCCTTCCATGGTTAAAGCTGCATACCCTACTGCCTTTCCCCTGAAACATCAGCAGAAGGTAA
GCAGAGCACTGAAAAGGAAAGCTGCA-TGTTGCACCTCGTCTTAATCTGATGCTGAGAAGAAACGCATGACAGGATCTAA
GGCTGGCGCTGGCCCTGGCAGAATCGGTGTCCCAGCCCATTCCTACAGCTGCAGCTGCAAACGAGCTGTACAAGGTAGCC
AAATCGCTGGGCCTCGCCGACCAGGACTTCTCCGCGGTCATTGAGGCGCTCAAGGCTGAAATGCAGAGCTCGCAGCACTA
GATATTGTTTCTTCAGCCGGCCAAGTTTGAGTGTGGCATTCAAATGTATTCGCCCATCTTGTCTCTTTTGCGGAC-----
----------------------------ATATAAATGTGCTTGTTTTACAGGCAGAGTGTATACAGAAATGTAAAATGAA
TATATACAGAATATCAACCCTTGCAAAGGGGGAAACGGTATCGATATTTTTGGTATGTTTGTAGC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GTGTAGGTTCATTCATTTTGCTCCGTATGTAGTTCATATTGAAA
TCTCTAAAAAAAAGACTTGTATTTAGAAAGAGTAGTTCATATTAATAAAATATTCAGAACATCTTGTAACAGTGATCGGA
GGGAGGACTATATAACATGAGTTTCATGGTAGGCACAAAGAACGTAC------GTGCGGGTGCGGAACACAGAGAATGAG
GGTGACGAGAGCTGAGCCGGTGCTGGTGCACGCTGCCGGTGACGTTCCTGCCGCCGACGAGTACTACTTCCTCTCCAACC
TCGACCAGAATGTGGCAGTGCTCATGAAAACCGTGCACGTCTTCAGCCCGTCCCGCGCCCGCGACGACGCGGCCGCCGTG
ATCATGGACGCCCTGGGCAGGGTGCTCGTGCACTACTATCCATTCCAGGGGAGCCTGGTGGTCAGCGCCGACGACGGGAG
GCTCTCGGTCCGGAACGACCGCCGTGGCGTGCCTTTCGTCGTTGCGGACGCCGACTGCGAGCTCAAGGAGGTCGGGGACG
TCGTACTGTCGGCACCCGACGCCGCCGCGGTTCAGGAGCAGCTCGTGTTCGTCGGCCGCAGCA------ACTCCGAGGAA
AAGGAAGATGACGAGCTGGGGGCGCCTCTACTAAGCGTGCAGGTCACCAGGTTCAGGTGCGGCGGCTTCGTGCTCGGGCT
CGCCATGAACCACTGCCTGGCGGACGGCGTCGCCGCGGCGGAGTTCCTCCGCTCATGGGCCGAGATGGCCCGCGGAGTGC
CCCTCTCCTCCCCGCCCTTCCTCGACCGCACCGTGCTGCGCGCCAGGACGAGCCCCACGGTCGCCTTCCCGCACGAGGAG
TTCGCAGAGATGGAGGACGTGTCCGGCCTCGCCGGCCTCCGCGAGGAACCGCGGGTGCACCGGGCCTTCGCCATCGACGC
CGACAGGCTCGCGCGGCTGAAGCGGCAGGCGTGCGCGTGCTCCACCTTCGTGGCGCTGACGGCGTTCGTCTGGCGCGCGA
CGTCGCGCGCCATGAGGATGCGCCCCGAGCAGAAGAGCAAGCTCATGTTCGCCGTCGACGGCAGGTGGCGCGTCGACCCG
CCGCTGCCTCGCGGTTTCTGCGGGAACGCCGTCGTCTTCGCCTGCTGCGTGTCCACTGCCGGAGACCTCCTCGGCGGGCC
GGTGTCCGCTGCGGCCCGGTGGATCCAGGACGCCATCAGGCGCACGGCCGACGCGTTCATCCGTTCGGCCATCGACTACG
TAGAAGTGGCCGGTGGCCGGGCGCCATCGATGACGGCGACTACGCTGGTGACGGCGTGGAACCGTCTTGGGTTCCACGCG
GCCGATTTCGGGTGGGGCGAGGCCGCACAGTCTGGCCCCGCGGAGCTGCCGCGCGGGGAGGTGGTCATGTTTATGCGGGA
CGTGCGTGACGGCAGCATCGTGGTGCTTCTTGGCCTGCCGCGGTCGTGCATGCAAGAGTTCCAAGACATGGTGGATTTGA
TCTGAAACTAGT----------CATTTTAGCTTCTCACAAGGCCTTCCTTCATAATGTGTGTATGCATGGGATCTCAATT
TCAGCGTTGCGGCTGATGAGCAAAA---TATTATTGGCAACTTTCACGACCAAACGTATATACCATACAAATACAA-GGC
AGATTTTAACGATAACAATTATTGAGATGTGAAGTTGTCAACAGCACAACCAGAGAACTCAACTCAAACACTAGCTAACA
TGTGCCTGCTACTATGTGTGAATTTTCCTCCATGTGTTTCTTTCTCTATTCACACCCCAAGCAACATCGATGTGTCCTCG
TGTTTGATGCAGCAGTGTAGCGTATTCTTCCTGGGGGATACTCATCAGCTGACAGTTTGACGGAACAACCTGCTAATTTG
GTGAATTAATATACACAACGCAGACCCATGGATGCTAAGACCCGATACCAGCAACTCCCTTGGCTTGCGCTGCCGCTTGT
TGTGCTGCCGCCGCGGCCACGGCTGCGGCCGCTGCGGCTGGAGATGGGGGTGAAGCTGGCGTCTTCTGTGGGGCTTCAAC
AGCATGCCCCTGCGGCTGTTTGTTATCTACTTGGGCCAACAAGTTCTTTATTTGGGTTCCGCTCATGGTCTCATGCTCAA
GAAGTGCATTGGCTAGAGCATGGAGCTCCTTGTTGTGTTTGGTGAGGATAGCCTTTGCATTGTTGTATGCTTTCTCCAAG
AAATTCTTCACCTCCTCCTCAATTAGAAGCCTCGTTTCTGAGCTCATAGTCTTTCCGTCCTCTTCATAGTTGTATGAAAC
AAGACCCACCTGCTTGCTCATACCATACTGAGTAACCATTGCTCTTGCCATCAAAGTTGCTTGCTCAAAGTCGGATGAAG
CACCGGATGTCACCTCGCTATCCCCAAATATAAGCTCCTCTGCCACCCGCCCTCCCATGCACACATCCAATCTTGCTAGC
ATCTGTTTCCTTGACACGCTAGTCTCATCTTTGTCAGGGAGCTGAGCCACCATCCCAAGGGCCATCCC
>chr3A_3
--TGATAAGAGAATGTGCTTACATTTTCCGTACTCTGAAAGCAGTCAAGATTTTATCTTGGGGATGTCGGGAATGGCACA
GCAATGAAGCTCGTGGTTAATATGGTGATGGGGAGGTAAAGTGGAACCTCATTTATGTGGATCCTATGTATGGTCATGGA
GATTATCAAATCTTAGGTTTTACTGATCCTTGCGGTGAAACACTGCAGCATGATGGTCTCATTTGCAGAAGGGCTACTCC
TGAGTGAAAAAGTGGGGTTAGACCCGAATACTGTCGTCGAGGTAGCTTTACGAAAACAAGTATAG-----TAACCTGCAA
CATGTCAAGAGAGTTTTTCGTCTAACCCAGGGTGCACTGGTCGTCCAACAGGTGATTTCACAAGGTGCTATCAATGCTCC
CATGTTCTCCCTCAAGGGCCCTTCCATGGTTAAAGCTGCATACCCTACTGCCTTTCCCCTGAAACATCAGCAGAAGGTAA
GCAGAGCACTGAAAAAGAAAGTTGCATTGTTGCACCTCGTCTTAATCTGATGCTGAGAAGAAACGCATGACAGGATCTAA
GGCTGGCGCTGGCCCTG-CAGAATCGGTGTCCCAGCCCATTCCTACAGCTGCAGCTGCAAACGAGCTGTACAAGGTAGCG
AAATCGCTGGGCCTCGCCGACCAGGACTTCTCCGCGGTCATTGAGGCGCTCAAGGCCAAAGTGCAGAGCTCACAGCACTA
GATATTGTTTCTTCAGCCGGCCAAGTTTGAGTGTGGCATTCAAATGTATTCGCCCATCTTGTCTCTTTTGCGGAC-----
----------------------------ATATAAATGTGCTTGTTTTACAGGCAGAGTGTATACAGAAATGTAAAATGAA
TATATACAGAATATGAACCCATGCAAAGGGGGAAAGGGTATCGATATTTTTGGTATGTTTGTAATCAAGTTTGGTCATCG
CAGTCAGATGTTAGAAATGGTAAAGATAACCTAGCAAATTTATGGTCCCAACCGAACTATCTGACCAACCGTGACCACTT
CTCAAAACAAAAACAAAAAACCAACGGTGTGTGCGTGTGTATGTGGTGTGTATGTGAATATGTCTTTGAAGCTTTGGTTC
CATTATATATACTACACCCTCCTTTTCCGCCAAGAAAACACCCCCTCCATAAGATGTTCTAAAAAATAATCGAATCAGAT
--------------------------------------------------------------------------------
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----------------------------GTATATACACGCAATTTAGTGTGTTTGTTCACTCGCTTTAGTCTTTGTGTAC
TCCCTTCGTTCTTAAATACTATATAAATCTTTTTAGATATTCCAATATGACTACAT------------------------
--------ATACGGATATATATAGACATAGTTTAAAGTGTAGTTTCATTCATTTTGCTCCGTACGTAGTTCATATTAAAA
TCTCT--AAAAAG---TTGTATTTAGAAAGAGTAGTTCATATTAATAAAATATTCAGAACATCTTGTAACAGTGATCGGA
GGGAATACTATATAACATGAGTTTCATCGTAGGCACAAAGAACGTAC------GTGCGGGTGCGGAACACAGACAATGAG
GGTGACGAGGGCTGAGCCGGTGCTCGTGCACGCTGCCGGTGACGTTCCCGCCGCCGACGAGTACTACTTCCTCTCCAACC
TCGACCAGAATGTGGCAGTGCTCATGAAAACCGTGCACGTCTTCAGCCCGTCCAGCGCCCGCGACGACGCGGCCGCCGTG
ATCATGGACGCCCTGGGCAGGGTGCTCGTGCACTACTATCCATTCCAGGGGAGCCTGGTGGTCAGCGCCGACGACGGGAG
GCTCTCGGTGCGGAACGACCGCCGTGGCGTGCCTTTCGTCGTTGCGGACGCCGACTGCGAGCTCAAGGAGATCGGGGACG
TCGTACTGTCAGCACCCGACGCCGCCGCGGTTCAGGGGCAGCTCGTGTTCGTCGGCCGTAGTA------ACTCCAAGGAC
AAGTGCGACGACGAGCTGGGGGCGCCTCTACTGAGCGTGCAGGTCACCAGGTTCAGGTGCGGCGGCTTCGTGCTCGGGCT
CTCCATGAACCATTGCCTGGCGGACGGCGTCGCCGCGGCGGAGTTCCTCCGCTCCTGGGGCGAGATGGCCCGCGGCGTGG
CCCTCTCCTCCCCGCCCTTCCTCGACCGCACCGTGCTGCGCGCCAGGACGAGCCCCACGGTCGCCTTCCCGCACGAAGAA
TTCGCGGAGATGGAGGACGTGTCCGGCCTCGCCGGCCTCCGCGACGAACCGCGCGTGCACCGGGCCTTCGCCATCGACCC
CGGCAGGCTCGCGCGGCTGAAGCGGCAGGCGTGCGCGTGCTCCACCTTCGTGGCACTGACGGCGTTCGTCTGGCGCGCGA
CGTCGCGCGCCATGAGGATGTGCCCTGAGCAGAAGAGCAAGCTCATGTTCGCCGTCGACGGCAGGCGGCGCGTCGACCCG
CCGCTGCCTCGAGGTTTCTGCGGGAACGCCGTCGTCTTCGCCTGCTGCGTGTCCACCGCCGGCGAGCTCCTCTGCGGGCC
GGTGTCCGCTGCAGCCCGGTGGATACAGGACGCCATCAGGCGCACGGACGACGCGTTCATCCGTTCGGCCATCGACTACG
TGGAAGTGGCCGATGGCCGGGCACCGTCGATGACGGCGACGACGCTGGTGACGGCGTGGAACCGTCTTGGGTTCCACGCG
GCCGATTTCGGGTGGGGCGACGCCGCACGGTCTGGCCCTGCGGAGCTGCCGCGCGGGGAGGTGGTCATGTTTATGCCGGA
CGTGCGTGACGGCAGCATCGTGGTGCTTCTTGGCCTGCCGCGGTCGTGCATGCAAGAGTTCCAAGACATGGTAGATTTGA
TCTAAAACTAGCCTACTTTGGCCATTTTAGCTTC-------------CTTCGTAATGTGTGCATGCATGGGATCTCAATC
TCAGCGTTACGGCTGATGAGCAGAA---TATTATTGGCAACTTTCATGACCAAACG--TATACCGTACAAATACAATGGC
AGATTTTAACGATAACAATTATTGAGATGTGAAGTTGTCAACAGCA---------AACTCAACTCAAACACTAGCTAACA
TGTGCCTGCTACCATGTGTGAATTTTCCTCCATGTGTTTCTTTCTCTATTCACACCCCAAGCAACATCGATGTGTCCTCG
TGTTTGATGCAGCAGTGTAGCGTATTCTTCCTGGGGGATACTCATCAGCTGACAGTTTGACGGAACAACCTGCTAATTTG
GTGAATTAATATACACAATGCAGACCTATGGATGCTAAGACCCGATACCAGCAACTCCCTTGGCTTGCGCTGCCGCTTGT
TGTGCTGCCGCCGCGGCTGCGGCCGCAGCCGCTGCCGCTGGAGATGGGGGTGAAGCTGGCGTCTTCTGTGGGGCTTCAAC
AGCATGCCCCTGCGGCTGTTTGTTATCTACTTGGGCCAACAAGTTCTTTATTTGGGTTCCGCTCATGGTTTCATGCTCAA
GAAGTGCATTGGCTAGAGCATGGAGCTCCTTGTTGTGTTTGGTGAGGATAGCCTTTGCATTGTTGTATGCTTTCTCCAAG
AAATTCTTCACCTCCTCCTCAATTAGAAGCCTCGTTTCTGAGCTCATAGTCTTTCCGTCCTCTTCATAGTTGTATGAAAC
AAGACCCACCTGCTTGCTCATACCATACTGAGTAACCATTGCTCTTGCCATCAAAGTTGCTTGCTCAAAGTCCGATGAAG
CACCGGATGTCACCTCGCTATCCCCAAATATAAGCTCCTCTGCCACCCGCCCTCCCATGCACACATCCAATCTTGCTAGC
ATCTGTTTCCTTGACACGCTAGTCTCATCTTTGTCAGGGAGCTGAGCCACCATCCCAAGGGCCATCCC
>SNPs
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------------------------SSSSS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-----------S-------------
-------------------------------------------------------------------------------S
-----------------------S-----------S--------------------------------------------
-----------------------------------------------------------S-----------S---SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------S-------------
-----------------------------------------------------------------S---------S----
-------S---------------------------------------------S--------------------------
------------------S-S-----------SS-----------S---------S------------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--S-------S-------------------S-------------
-----S----SS------------------------------------SSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS----------------S-----S---S------------------------S--------------------
-S--------------------------------S------------------------------S--------------
-------S--------------------------------------SSSSSSS-----------------S---------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----S------------------------------------S------------------------S-------------
------------------------------------------S-------------------------------------
-----------------S---------------------------------------------SSSSSS-----------
------------------S----------------------------------------S--------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
------------------------S--------S----------------------------------------------
----S--------------------------------S------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--S-----------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------S----------------------S------------------------
-------------------------SSS--------S------------------SSS-SS-S--S--------------
-----------------------S--------------------------S------S---SS-----------------
-------------------------------------------------S------------------------------
---------------------S-------------------------------S-----S-S------------------
----------------------S----S---------------------SS-------------S---------------
-----S--------S--S--S--S--S-----S-----------------------------------------------
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---------------------------------------------------------S----------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------
>forward_640
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------------------------------------------------------------ACGAGCTGTACAAGGTAGCA
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>reverse_2147
--------------------------------------------------------------------------------
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------------------------------------------------------------------GCAACTCCGAGGAC
AAGGAA--------------------------------------------------------------------------
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>forward_1452
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------------------------------------------------------------------------TTGTGTAC
TCCCTCCGTTGC--------------------------------------------------------------------
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>reverse_3180
--------------------------------------------------------------------------------
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-----------------------------------------------------------GCATCGCACAAATACAAGGCA
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