>input_sequence_39082
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-------------------------------------------------------------------ATGCCTACCGCTA
GCGCCTCCATGGCCGCCGCCGCCTCCTGCCGGAGCCCACTCGTCTGGTTCTTCTCCCTCGCCGCCGCGCTCTTCTTCGCC
TCCTGGTACCTCCTCCTCGACTCCGCCGCCGCCCCGGCCGCGCTCGATGCCCACCGCCAGGGCCTCCGCCCCGCCTCTCC
AGGCAGGAAATGCGATCCGGACAAGGCACTGCTGCGCGTCTACATGTACGACCTGCCCCTCGAGTTCCACTTCGGCATGC
TCGACTGGGAGCCCGGGAGCGGCGGCGGCGGCGGCCTTTGGCCGGACGTCAGGCACGGCGTGCCGGAGTACCCAGGAGGG
CTCAACCTGCAGCACAGCATAGAGTACTGGCTCACGCTGGACCTCCTCGCCTCCGAGCAGGGCGCGCCCACGCCGTGCAA
CGCCGTCCGGGTGCGCGACCCCGCCAGGGCCGACGTCGTCTTCGTGCCCTTCTTCGCCTCCCTCAGCTTCAACCGCCACT
CCAAGGTCGTGCCGCCCGCGCGGACCAGCGAGGACCGGGCGCTGCAGCGGAGGCTGATCGACTTCCTCGCCGCGCGGCCG
GAGTGGCAGAGGTCCGGCGGGAGGGACCACGTTGTGCTCGCGCACCACCCCAACGGGATGCTCGACGCGCGCTACAAGCT
CTGGCCCTGCGTCTTCGTGCTCTGCGACTTCGGGAGGTACCCACACAGCGTCGCCAACATCGACAAGGACGTCATCGCCC
CGTACCGGCATGTCGTCGACAACTTCTTCAATGACTCCACCGGCTACCACGACCGGCCGACCTTGCTCTACTTCCAAGGC
GCCATTTACAGGAAAGATGTGAGTACCCTTTGATGA-AGCTTACTAGTTTTAGCTTAAGCAGGGA---AAAATCGTGGTG
TGATTAGTCAACTTCCATTTTTAATAATAATATATAGCCATTTGGTTTTAAAACTTGCTTTGCATGTGTCGTTTC-CCTA
CATAGATTTGAGAATGTTTGCCATGTACTGGTA--------------CTATTTAACCGATTTAAGTTTCAGTCAGTAGCA
CGATCCTAAGCTAGCACAACCTCATCTGTAGTCTGGAGTCTGGACACCCTCCGTGGTACTTGATTTGGACTTCAATGATT
CTGGCTACGGGAAATATCCTAGTTGCAATTAATTGTCATTGG-ATTGCCTTGTTCACTATCCAGCTGAGTTTGGTTC---
---------------------------------GCTATCACCTCTTTCATGTGACTGTTACC------------------
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-------TACTTATAAGCCCCATTTATGTTATAGCTCTAG------GGTTTGATACTTAAGAGGTTCTATAATCTGATAA
GGTTGATAATCCAAAATTGTGATTGTCGCTTTCACACATTTGTGGCAC-TAGTGTATAATATGGTTTATTAAGCAAGATA
TACGAATTATTGACTGTCTGAAAACCGAGGTCCTGAGAATGTATGATCTATGTGAAATATTGATGATTCTCATGGTTGTG
ATCTTTTGAATCACAACCTTGCAGGGTGGTTTCATTCGACAGGAACTTTACTATCTTCTCAAAGATGAGAAAGATGTGCA
CTTCTCATTCGGAAGTGTGGCTGGTAATGGGATTGAGGAATCGACACGGGGTATGAGGGCATCCAAATTCTGCCTCAACA
TTGCAGGGGATACGCCATCCTCCAACCGCCTATTCGATTCCATAGTCAGTCACTGTGTGCCCGTCATTATCAGCGATGAG
ATTGAACTCCCATTTGAAGATATCCTTGACTACTCCAAGTTCTGCATCATAGTGCGTGGTGCAGATGCTGTCAAGAAGGG
CTTTCTGATAAATCTGATCAAAGGAATAAGCCCAGAAGAGTGGACAATCATGTGGAACAAACTGAGGGAGGTAGAAGGGC
ACTTTGAATACCAGTACCCATCTCAGCCTGACGATGCTGTCCAGATGATCTGGAAGACCATAGCTCGAAAAGTGCCCTCA
ATTCGGCTGAAGGTCAACAGATTACAAAGATTTTCCCGGTCTGAAGCTAACAAAACAAACGATTCTCCAGCAAGATCTTC
CTGGCTAGAAAATCAAGCTCGTTGA-------------------------------------------------------
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>chr4B_1_TraesCS4B01G175000
ATCTGGCAATGGGATGCTACAGGCAAGTACTCGACAAAATCAGCGTACAAAATGATGTGTGAGGGAGGA-GTACGATTTC
AATGTGCTTCGGCTGTCTGGCGCAG-TTGGGCTACGATGACCTGCAAGCTCTTCATTTGGCTTGCACTTCAGCACAGAGT
GTGGACTTCGGACCGCAGACAGGGGCATGGGTTGCAAGATCATAGCTCGGCATGTTACCTTTGTGACCAAGAAGAGGACA
ATATGGATCACATACTCATGCAATGTGTATATGCGAGACAAGTGTGGTTTTTGTGTTTCAGAAGGCTGGGCGTGGACGAA
GCTTTGATCCCAACCACGGAAGACACACTAGGTGATTGGTGGGTGTCTGCCAGAAAGCGAATTGACAAGAGATACCGGAG
AGGATTCGACACAATCTGCATTTCTGTATGCTGAAATCTATGGAAGCAGAGAAATGGCAGAGTCTTTCGCAACAGCAACA
TCACCAACGAATGGGGAGCAGACGATCTTGTCCACCAGGAACTTAGGCTATGGGCCTTGTCGAGAGGGAAAGGAGTTCTA
CATTGTATAGAGTAGTAGCCTAGCGTGTGGAGTGGAGGGATGGACGTGCATACCGT-----GTGTGATAGTGCATTCCGT
CGTATGTAATTCTTGTACATAACTCT-TTTCGTCTATAAAGCTGGGGTACGCAATTTGGGTACGAGAAAAATCGAGCTCT
TTGAGGAAAGCGGCAAAAGGGCAGCGACCGCAATGGGGTGGCAGTGCGTGCGTCCTTGCGTGGATCTGGAATGGAAAGAG
GCCGTTCCTCGGTTCCTG-----CCGCACCGCATCCGTCCAAGCGCAACAGTCCCGTTCGACGCCCAAGCCCAGAT----
----------CCACCCCCACGCGACACCCCCACCCGAGGCAGGAGACCGCGGCCGCCACTGACCCATCCCCACATACCAG
TACCACACACGTATCCCCACCTCCTCAGATCCGAGCGCCATGGCCGCCCACCCCCACCCGCATTGCTATGCCTACCGCTA
GCGCCTCCATGGCCGCCGCCGCCTCCTGCCGGAGCCCACTCGTCTGGTTCTTCTCCCTCGCCGCCGCGCTCTTCTTCGCC
TCCTGGTACCTCCTCCTCGACTCCGCCGCCGCCCCGGCCGCGCTCGATGCCCACCGCCAGGGCCTCCGCCCCGCCTCTCC
AGGCAGGAAATGCGATCCGGACAAGGCACTGCTGCGCGTCTACATGTACGACCTGCCCCTCGAGTTCCACTTCGGCATGC
TCGACTGGGAGCCCGGGAGCGGCGGCGGCGGCGGCCTTTGGCCGGACGTCAGGCACGGCGTGCCGGAGTACCCAGGAGGG
CTCAACCTGCAGCACAGCATAGAGTACTGGCTCACGCTGGACCTCCTCGCCTCCGAGCAGGGCGCGCCCACGCCGTGCAA
CGCCGTCCGGGTGCGCGACCCCGCCAGGGCCGACGTCGTCTTCGTGCCCTTCTTCGCCTCCCTCAGCTTCAACCGCCACT
CCAAGGTCGTGCCGCCCGCGCGGACCAGCGAGGACCGGGCGCTGCAGCGGAGGCTGATCGACTTCCTCGCCGCGCGGCCG
GAGTGGCAGAGGTCCGGCGGGAGGGACCACGTTGTGCTCGCGCACCACCCCAACGGGATGCTCGACGCGCGCTACAAGCT
CTGGCCCTGCGTCTTCGTGCTCTGCGACTTCGGGAGGTACCCACACAGCGTCGCCAACATCGACAAGGACGTCATCGCCC
CGTACCGGCATGTCGTCGACAACTTCTTCAATGACTCCACCGGCTACCACGACCGGCCGACCTTGCTCTACTTCCAAGGC
GCCATTTACAGGAAAGATGTGAGTACCCTTTGATGA-AGCTTACTAGTTTTAGCTTAAGCAGGGA---AAAATCGTGGTG
TGATTAGTCAACTTCCATTTTTAATAATAATATATAGCCATTTGGTTTTAAAACTTGCTTTGCATGTGTCGTTTC-CCTA
CATAGATTTGAGAATGTTTGCCATGTACTGGTA--------------CTATTTAACCGATTTAAGTTTCAGTCAGTAGCA
CGATCCTAAGCTAGCACAACCTCATCTGTAGTCTGGAGTCTGGACACCCTCCGTGGTACTTGATTTGGACTTCAATGATT
CTGGCTACGGGAAATATCCTAGTTGCAATTAATTGTCATTGG-ATTGCCTTGTTCACTATCCAGCTGAGTTTGGTTC---
---------------------------------GCTATCACCTCTTTCATGTGACTGTTACC------------------
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-------TACTTATAAGCCCCATTTATGTTATAGCTCTAG------GGTTTGATACTTAAGAGGTTCTATAATCTGATAA
GGTTGATAATCCAAAATTGTGATTGTCGCTTTCACACATTTGTGGCAC-TAGTGTATAATATGGTTTATTAAGCAAGATA
TACGAATTATTGACTGTCTGAAAACCGAGGTCCTGAGAATGTATGATCTATGTGAAATATTGATGATTCTCATGGTTGTG
ATCTTTTGAATCACAACCTTGCAGGGTGGTTTCATTCGACAGGAACTTTACTATCTTCTCAAAGATGAGAAAGATGTGCA
CTTCTCATTCGGAAGTGTGGCTGGTAATGGGATTGAGGAATCGACACGGGGTATGAGGGCATCCAAATTCTGCCTCAACA
TTGCAGGGGATACGCCATCCTCCAACCGCCTATTCGATTCCATAGTCAGTCACTGTGTGCCCGTCATTATCAGCGATGAG
ATTGAACTCCCATTTGAAGATATCCTTGACTACTCCAAGTTCTGCATCATAGTGCGTGGTGCAGATGCTGTCAAGAAGGG
CTTTCTGATAAATCTGATCAAAGGAATAAGCCCAGAAGAGTGGACAATCATGTGGAACAAACTGAGGGAGGTAGAAGGGC
ACTTTGAATACCAGTACCCATCTCAGCCTGACGATGCTGTCCAGATGATCTGGAAGACCATAGCTCGAAAAGTGCCCTCA
ATTCGGCTGAAGGTCAACAGATTACAAAGATTTTCCCGGTCTGAAGCTAACAAAACAAACGATTCTCCAGCAAGATCTTC
CTGGCTAGAAAATCAAGCTCGTTGATTTTGGACCAACAAACTCTCCCAGCTGGTTTTCAGTCCTCTGCAAGAGGAGAGTG
CCCATAGGGAAGCTGAGCTTGAACCTCAAAGCCGGGAGCAACAGCTACAAGAGATTAATGGAGTAAAGTACTCCTGATAC
AGTTTAT-ATCACAATATTACAGATCCGAGGACCTGATTTTTGTTCTCCTCCAATTTTCATCGAAAATGTGCTCAACCGT
GTAGTTTAGGAACAATAACTTTTTGTATCAGAATCTGTATATTCTAGGCAGTAGCGTGATTACTGATCATTTCCACTCTA
GTCTTATAGCACTACTTCACAGGTGTAACTCCCCATTCTCGGAGCAAGAGTTTTTTATGGTTCCTTGCTCGATTCTATCC
ATGTGATATCTGCAGATGACCGGCATATGTCGTCCTTCCCTTCCATTATAGGGTCAATGACAAGAATTGCTGCTGTTCAG
GCAATTGCATAGGTGCACAGGTCGTTGCCT-----------TCTTGGTAACTA-TTGCTTATCTGATCTGGGCAATTGAC
------------AAGCCAGGTAGACTCCTGACTGCCCTTGCGGCTGCCTCATGGGTGTCTGGCCTCTGTACTAAGAGCAT
CTCCAACAGCCGCCTGTTTGCCGCGCGCGCTTCGGCTGGTTTAGCGCGGCATTATAATGCACAGCACGCGCCGCTCCGAT
AGCGCGTCAAAATACAGCGTGCGCCGCACAAACCACATATACATTTCAAAAAAGGGAAGCAAAAATGATCAAACAAACAA
AATAAATCAACAATAAATAGTTCAATTTCGTTATCATTACAACTCAAACAAATAGTTTATCGTTCAGTACAACAAATAAT
GCAATAAACACAACAAATAGTTCATGAACAATACAATGTTGAATGCAGAAATCATACTCTTTGTCGTCCATGCCATGCCC
ACCACCCTTCAATCAGATCATTCTGAAGTTCATTGTGCGTTGCGGGACGCCGAATGGCATGATAGGAGGCAATAAAACGG
GCTACCCTTT
>chr5B_1
ATCTGGCAATGGGATGCTACGGGCAAGTACTCGGCAAAATCGGCGTACAAAATGATGTGTGAGGGAGGA-GTACGATTTC
AATGTGCTTCGGCTGTCTGGCACAGTTTGGGCTACGATGACCTGCAAGCTCTTCATTTGGCTTGCACTTCAGCACAGAGT
GTGGACTTCGGACCGCAGACAGAGGCATGGGCTGCAAGATCATAGCTCGGCATGTTACCTTTGTGACCAAGAGGAGGACA
GTGTGGATCACATACTCATGCAATGTGTATATGCGAGACAAGTGTGTTTTTTGTGCTTCAGAGGGCTGGGCGTGGACGAA
GCTTTGATTCCAACCACGGAAGACACACTAGGTGATTGGTGGGTGTCTGCCAGGAAGCGAATTGACAAGAGATACCGGAG
AGGATTCGACACAATCTGCAATTCTGTATGCTGGAATCTATGGAAGCAGAGAAATGGCAGTGTCTTTCGCAACAGCCACA
TCACCAACGAGTGGGGAGCAGCCGATCTTGTCCACCAGGAACTTAGGCTATGGGCCTCGGCGAGAGGGAGAGGGGTTCTA
CATGGTATAGAGTAGTAGCCTAGCATGTGGAGTGGAGGGGTGGACGTGCATGCCGT-----GTGTGGTAGTGCATTCCGT
CGTATGTAATTCTTGTACATAATTCTCTTTCGTCTATAAAGCTAAGATACGCAATTTGCGTAC-----------------
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>chr5B_1
ATCTGGCAATGGGATGCCACGGGCAAGTACTCGACAAAATCGGCGTACAAAATGATGTGTGAGGGAGGA-GTACGATTTC
AGTGTGCATCGGCTGTCTGGCGTAG-TTGGGCCACGATGACCTGCAAGCTCTTCATTTGGCTTGCACTTCAGCATAGAGT
GTGGACTTTGGACCGCAGACAGAGGCATGGGCTACAAGATCATAGCTCGGCATGTTACCTTTGTGACCAAGAGGAGGACA
ATGTGGATCACATACTCATGCATTGTGTATATGCGAGACAAGTATGGTTCTTGTGTTTCAGAAGGCTGGGCGTTGACGAA
GCTTTGATCCCAACCACGGAAGACACACTAGGTGATTGGTGGGTGTCGGCCAGGAAGCAAATTGACAAGAGACACCGAAG
AGAATTCGACACACTCTGCATTTCGGTATACTGGAATCTGTGGAAGCAGAGAAATGATGTAGTCTTTCGCAACAGTAACA
TCACCAATGAATGAGGAGCAGCCGACCTTGTCCACCAGGAACTTGGGTTATGGGCCTCGGCGAGAGGGAGAGGAGTACTA
CATGATATAGAGTAGTAGCCTAGCGTGTGGAGTGGAGGGGTGGACGTGCATGCCGT-----TTGTGGTAGTGCACTCCGT
CGTGTCTAATTCTTGTACATAACCCTCTTTTGTCTATAAAGCTAAGGTACGCAATTTGCGTAC-----------------
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>chr5B_1
ATCTGGCAATGGGATGCAACCAGCAAATACTCGACAAAATCGGCATACAAAATGATGTGTGAGGGGGGGTGTAAGATTCC
AATGTGCCTCGGCTGTCTGGCGTAG-TTGGGCTACGATGACTTGCAAGCTCTTCATGTGGCTTGCACTTCAGTACAGAGT
CTGGACTTCGGATCGCAGACAGAGGCATGGTTTGCAAGATCATAGCTCGGCATGTTTCCTATGTGACCAAGAGGAGGACA
AAGTGGATCACATACTTCTACAATGCGTCTATGCGAGACAAGTGTGGTTTCTATGCTTCAGACGGTTGGGCGTTGACGTA
GCTTTGATTCCAACCACGGACGACACACTAGGCGACTGGTGGGTGTCCGCTAGAAAGTGCATTGATAAGAGATACCGGAG
AGGATTCGACACAATCTGCATCTCAGTCTGCTGGAATATATGAAAACAGAGAAACAACAGAGTCTTTCGCAATAGCAACA
TCGCCAATGAATGGGGAGCAGCCGAGATTATCCACCAGGAAATTAGACTTTGGGCCTCGGCGAGAGGGAGAGGAGTCCAA
CATGGTTTAGAGTAGTAGCCTAGCGTGTGGAGTGGTGGGGTGGACGTGTCTGCCGT-----GTGTGGTAGTGCATTCCGT
CGTCTGTAATTCTTGTACATAACTCTATCTCGTCTATAAAGCTAAGGTACGCATTTTATGTAC-----------------
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>chr3B_1
ATCTGGCAATGGGATGCCACGGGCAAGTACTCGGCAAAATCGGCATACAAAATGATGTGTGAGGGAGGA-GTACAATTTC
AATGTGCTTCGGCTGTCTGGCGCAG-TTGGGCTACGATGACCTGCAAGCTCTTCATTTGGCTTGCACTTCAGCACAGAGT
GTGGACTTCGGACCGCAGACAGAGGCATGGGCTACAAGATCATAGCTTGGCATGTTACCTTTGTGACCAAGAGGAGGACA
ATGTGGATCACATACTCATGCATTGTGTATTTGCGAGACAAGTGTGGTTTTTGTGGTTCAGAAGGCTGGGCGTTGACGAA
GCTTTGATCCCAACCACGAAAGACACACTAGGTGATTGGTGGGTGTCGGCCAGGAAGCGAATTGACAAGAGACACCGGAG
AGGATTCGACACACTCTGCATTTCTGTATGCTGGAATCTATGGAAGCAGTGAAATGGCAGAGTCTTTCGCAACAGCGACA
TCACCAATGAATGGGGAGCAGCTGACCTTGTCCACCAGGAGCTTGGGCTATGGGCCTCGGCGAGAGGGAGAGGAGTTCTA
CATGATATAGAGTAGTAGCCTAGCGTGTGGAGTGGAGGGGTGGACGTGCATGCCGT-----TTGTGGTAGTGCACTCCGT
CGTGTCTAATTCTTTTACATAACCCTCTTTCGTCTATAAAGCTAAGGTACGCAATTT-----------------------
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>chr1D_1
ATCTGGCAATGGGATGTAACTGGCAAGTACTTGGCAAAATCGGCGTACAAGATGATGTGTGAGGGAGGG-GTAAGATTTC
AATGCGCCTCGGCTGTCTGGCACAG-TTGGGCCACGATGACCTGTAAGCTCTTCATTTGGCTCGCACTCCAGTATAGAGT
GTGGACTTCGGACCGCAGACAGAGGCATGGTCTGCAAGATCATAGCTCGGCATGCTTCCTATGTGACCAAGAAGAGGACA
AAGTGGATCACATACTACTACAGTGTGTATATGCGAGACAAGTGTGGTTTCTGTGCTTCCGAGAGCTGGGCGTGGATGAA
GCTTTGATTCCAACCACAGAGGATACACTAGGTGATTGGTGGGTATCCGCTAGAAAGCGCATTGACAAGAGACACCGGAG
AGGATTCGACACAATCTGCATTTCAGTCTGCTGGGACATATGGAAGCAGAGAAACGGCAGAGTTTTTCACAACAGCAACA
TCGCCAACGAGTGGGGAACGGCCGATACCATCCACCAGGAACTTAGGCTATGGGCATTGGCGAGAGGGAGAGGAGTTCAA
CATGGTATAGAGTAGTAGCCTAGCATGTGGAGTGGAGGGGTGGACGTGCATGCCGT-----GTGTGGTAGTGCATTCCGT
CGTCTGTATTTCTTGTACATAGCTCTCTTTCGTCTATAAAGCTAAGGTACGCATTTTGCGTAC-----------------
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>chr2D_1
ATCTGGCAATGGGATGTAACTGGCAAGTACTCGGCAAAATCGGCGTACAAGATGATGTGTGAGGGAGGG-GTCAGATTTC
AATGCGCCTCGGCTGTCTGGCGCAG-TTGGGCCATGATGACCTGTAAGCTCTTCATTTGGCTCGCACTCCAGTACAGAGT
GTGGACTTCGGACCGCAGACAGAGGCATGGTCTGCAAGATCATAGCTCGGCATGCTTCCTATATGACCAAGAAGAGGACA
AAGTGGATCACATACTACTACAGTGTGTATATGCGAGACAAGTGTGGTTTCTGTGCTTCCGAGAGCTGGGCGTGGATGAA
GCTTTGATTCCAACCACAGAGTATACACTAGGTGATTGGTGGGTATCCGCTAGAAAGCGCATTGACAAGAGACACCGGAG
AGGATTCGACACAATCTGCATTTCAGTCTGCTGGAACATATGGAAGCAGAGAAACGGCAGAGTTTTTCGCAACAGCAACA
TCGCCAACGAGTGGGGAACGGCCGATATCATCCACCAGGAACTTAGGCCATGGGCATCGGCGAGAGGGAGAGGAGTTCAA
CATGGTATAGAGTAGTAGCCTAGCGTGTGGAGTGGAGGGGTGGACGTGCATGCCGTGCCGTGTGTGGTAGTGCATTCCGT
CGTCTGTATTTCTTGTACATAACTCTTTTTCGTCTATAAA----------------------------------------
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>chr2D_1
ATCTGGCAATGGGATGCAACCGGCAAATATTCGGCAAAATCGGCGTACAAAATGATGTGCAA-GGGGGT-GTAAGATTCC
AATGTGCCTCGGTTGTCTGGCACGG-TTGGGCTACGATGACTTGCAAGCTCTTCATATGGCTTGCACTTCAGTACAGAGT
CTGGACTTCGGATCGCAGACAGAGGCATGGTTTGCAAGATCATAGCTCGGCATGTTTCTTATGTGACCAAGAGGAGGACA
AAGTGGATCACATACTTCTGCAATGCATCTATGCGAAACAAGTGTGGTTTCTGTGCTTTAGACAGTTGGGCGTGGACGTA
GCTTTGATTCCAACCACGGAAGACACACTAGGCGACTGGTGGGTGTCCGCTAGAAAGCGCATCGATAAGAGATACCGGAG
AGGATTCGACACAATCTGCATCTCAGTCTGCTGGAATCTATGAAAACAGAGAAACGGCAGAGTCTTTCGCAACAGCAACA
TC--CAATGAATGGGGAGCAGCTGATATTATCCATCAGGAAATTAGGCTTTGGGCTTTGGCGAGAGGGAGAGGAGTTCAA
CATGGTTTAGAGTAGTAGCCTAGCGTGTGGAGTGGTAGGGTGGACGTGTCTGCCGT-----CTGTGGCAGTGCAATCCGT
CGTCTGTAATTCTTGTACATAACTCTCTCTCGTCTATAAAGGTAAGGTACGCATTTTGCGTAC-----------------
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>chr7B_3
--CTGGCAATGGGATGCTACGGGCAAGTACTCGGCAAGATCGGCGTACAAAATGATGTGTGAGGGAGGA-GTTCGGTTTC
AATGTGCCTTGGCTGTCTGGCGCAG-TTGGGCTACGATGACCTGCAAGCTCTTCATTTGGCTTGCACTTCAGCACAGAGT
GTGGACTTCTGACCGTAGACAGAGGCATGGGTTGCAAGATCATAGCTCGGTATGTTACCTTTGTGACCAAGAGGAGGACA
ATGTGGATCACATACTCATGCAATGTGTATATGCGAGACAAGTGTGGTTTTTGTGCTTCAGAAGGCTGGGCGTCGACGAA
GCTTTGATCCCAACCACGGAAGACACACTAGGTGATTGGTGGGTGTCTGTCAGAAAGCGAATTGACAAGAGATACCGGAG
AGGATTCGACACAATCTGCATTTCTGTATGCTGGAATCTATGGAAGCAGAGAAATGGCAGAGTCTTTCGCAACAACAACA
TCACCAACGAATGGGGAGCTGTCATCCTTGTCCACCAGGAACTTAGGCTATGGGCCTCGGCGAGAGGGAGAGGAGTACTA
CATGGTATAGAGTAGTAGCCTAGCGTGTGGAGTGGAGGGGTGGACGTGCATGCCGT-----GTGTGGTAGTGCAATCCGT
CGTATGAAAATCTTGTACATAACTTTCTTTCGTCTATAAAGCTAAGGTACGCATTTTGCGTAC-----------------
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>chr3D_4
---TGGCAATGGGATGCAACCAGCAAGTACTCGGCAAAATCGGCGTACAAAATGATGTGTGAGGGGGGA-GTAAGATTTC
AATGTGCCTCGGCTGTCTGGCGCAG-TTGGGCTACGATGACTTGCAAGCTCTTCATGTGGCTTGCACTTCAGTACAGAGT
CTGGACTTCGGATCGCAGACAGAGGCATGGTTTGCAAGATCATAGCTCGGCATGTTTCCTATGTGACCAAGAGGAGGACA
AAGTGGATCACATACTCCTGCAATGCATCTATGCGAGACAAGTGTGGTTTCTGTGCTTCAGACAGTTGGGCGTTGACGTA
GCTTTGATTCCAACCACGGAAGACACACTAGGCGACTGGTGGGTGTCCGCTAGAAAGCGCATTGATAAGAGATACCGGAG
AGGATTCGACACAATCTGCATTTCAGTCTGCTGGAATCTATGGAAACAGAGAAACGGCGGAGTCTTTCGCAACGGCAACA
TCGCCAATGAATGGGGAGCAGCCGATATTATCTACCAGGAAATTAGGTTATGGGCTTCGGCGAGAGGGAGAGGAGTTCAA
CATGGTATAGAGTAGTAGCCTAGCGTGTGGAGTGGTGGGGTGGACGTGCCTGCCGT-----GTGTGGTAGTGCATTCCGT
CATCTGTAATTCTTGTACATAACTCTCTCTCGTCTATAAAGCTAAGGTACGCAATTTGCGTAC-----------------
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>chr4D_704
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-----------------------------------------------------------------------TCGAGGTCT
TTGAGGAAAGCGGCAAAAGGGTAGCGACCGCAATGGGGTGGAAGTGCGTGGG------------TCTGGAGTGGAAAGAG
GCCGTTCCTCGGTTCCTG-----CCGCACCGCATCCGTCCAAGCGCAACCGTCTCGTTGGACGCCCCCAGATCCGACCCT
CTCGACCCGGCCACCCCCACTCCACACCCCCACCCGAGGCAGGAGACCGCGGCCGCCACTGACCCATCCCCACATA----
--CCACACACGTATCCCCACCTCCTCAGATCCGAGCGCCATGGCCGCCCATCCCCACCCGCATTGCTATGCCTACCGCTA
GCACCTCCATGGCCGCCGCCGCCTCCTGCCGGAGCCCGCTCGTCTGGTTCTTCTCCCTCGCCGCCGCGCTCTTCTTCGCC
TCCTGGTACCTCCTCCTCGACTCCGCCGCCGCCCCGACCGCGCTCGATGCCCGCCGCCAGGGCCTCCGCCCCGCCTCTCC
AGGCAGAAAATGCGATCCGGACAAGGCGCTGCTGCGCGTCTACATGTACGACCTGCCCCTCGAGTTCCACTTCGGCATGC
TCGACTGGGAGCCTGGGAGCGGCGGCGGCG---GCCTTTGGCCGGACGTCAGGCACGGCGTGCCGGAGTACCCCGGAGGG
CTCAACCTGCAGCACAGCATCGAGTACTGGCTCACGCTGGACCTCCTCGCCTCCGAGCAGGGCGCGCCCACGCCGTGCAA
CGCCGTCCGGGTGCGCGACCCCGCCAGGGCCGACGTCGTCTTCGTGCCCTTCTTCGCCTCCCTCAGCTTCAACCGCCACT
CCAAGGTCGTGCCGCCCGCGCGGACCAGCGAGGACCGGGCGCTGCAGCGGAGGCTGATCGAGTTCCTCGCCGCGCGGCCG
GAGTGGCGGAGGTCCGGCGGGAGGGACCACGTCGTCCTCGCGCACCACCCCAACGGGATGCTCGACGCGCGCTACAAGCT
CTGGCCCTGCGTCTTCGTGCTCTGCGACTTCGGGAGGTACCCACACAGGGTGGCCAACATCGACAAGGACGTCATCGCCC
CGTACCGGCATGTCGTCGACAACTTCTTCAATGACTCCACCGGCTACCACGACCGGCCGACCTTGCTCTACTTCCAAGGC
GCCATTTACAGGAAAGATGTGAGTACCCTTTGATGAAACCTTACTAGTTTTAGCTTAAGCAGGGAATTAAAATCGTGGTG
TGATTAGTCAACTTCCATTTTTAATAATGTAGCTA------TTGATTTTAAAAGTTGCTTTGCATGTGTCCTT-CTCCTA
CATAGATTTGAGAATGTTTGCCATGTACTGCTA--------------CTATTTAACCGATTTAAGTTTCAGTCAGTAGCA
CGATCCTAGGCTAGCACAACCTCATCTGTAGTCTGGAGTCTGGACACCCTCCGTGGTACTTGATTTGGACTTCAATGATT
CTGGCTACGGGAAATATCCTAGTTGCAAATAATTGCCATTGGCATTGCCTTGTTCACTATCCAGCTGAGTTTGGTTGGCT
CGTCTTGCTCATTAATCCAGCTCACTTTGGTATGCTATCACTTCTTTCATGTGACTGTTACC------------------
--------------------------------------------------------------------------------
-------TACTTATAAGCCCCGTTTATGTCATAGCTCTAATGAGTCGGTTTAATACTTAAGAGGTTCTATAATCTGATAA
GGTTGAGAATCC-AAATTGTGATTGTCGCTTTCACACATTTGTGGCAAGTAGTGTATAATATGGTTTATTAAGCAAGATA
TATGAATTATTGACTGTCTGAAAACCAAGGTCCTGAGAATGTATGATCTGTGTGAAATATTGATGATTCTCATGGTTGTG
ATCTTTTGAATCACAACCTTGCAGGGTGGTTTCATCCGACAGGAACTTTACTATCTTCTCAAAGATGAGAAAGATGTGCA
CTTCTCATTTGGAAGTGTGGCTGGTAATGGGATTGAGGAATCGACACGGGGTATGAGGGCATCCAAATTCTGCCTCAACA
TTGCAGGGGATACGCCATCCTCCAACCGTCTATTCGATTCCATAGTCAGTCACTGTGTGCCCGTCATTATCAGCGATGAG
ATTGAACTCCCATTTGAAGATATCCTTGACTACTCCAAGTTCTGCATCATAGTGCGTGGTGCAGATGCTGTTAAGAAGGG
CTTTCTGATAAATCTGATCAAAGGGATAAGCCCAGAAGAGTGGACAAGCATGTGGAACAAACTGAGGGAGGTAGAAGGGC
ACTTTGAATACCAGTACCCATCTCAGCCTGACGATGCTGTCCAGATGATCTGGAAGACCATAGCTCGAAAGGTGCCTTCA
ATTCGGCTGAAGGTCAACAGATTACAAAGATTTTCCCGGTCTGAAGCTAACAAAACAAACGATTCTCCGGCAAGATCTTC
CTGGCTAGAAAATCAAGCTCGTTGATTTTGGACCAACAAACTCTCCCAGCTGGTTTTCAGTCCTCTGCAAGAGGAG--TG
CCCATAGTGAAGCTGAGCTTGAACCTCGAAGCCAGGAGCAACAGCTACAAGAGATTAATGGAGTAAAGTACTCCTGATAC
AGTTTACCATCACAATATTACAGATCCGAGGGCCTGATTTTTGTTCTTCTCCAATTTTCGTCGAAAATGTGCTCAACCGT
GTAGATTAGGGACAATAACTTTTTGTATCAGAATCTGTATATCCTAGGCAGTAGCGTAATTACTGATCATTTCCAATCTA
GTCTTAT---ACTACTTCAGAGGTGTAACTCCCCATTCTCGGAGCAAGAG-TTTTTATGGTTCCTTGCTCGATTCTATCC
ATGTGATACCTGCAGATGACCGGCATATGTCGTCCTTCCCTTCCATTATTGGGTC-ATGACAAGAATTGCTGCTGTTCAG
GTGATTGCATAGGTGCGCTCAAGTCTCGGTTGCCTCTTCGCTCTTGGTAACTACTTGCCTATCTGATCTGGGCAATTTAC
CCACTGAGCTGCAAGCCAGGTATACTCCTGACTGGCTTTGCGGCTGCCTCATGGGTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>chr4A_704
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TCGAGGTCT
TTGAGGAAAGCGGGAAAAGGGTAGCGACCGTAATGGGGTGGAAGTGCGTGCGTCCTTGCGTGGATCTGGAGTGGAAAGAG
GCAGTTCCTGGGTTCCTGCCGCACCGCACCGCACCCGTCCAAGCGCAACCGTCTCGTTGGACGTCCCCAGATCCGACCCT
CTCGACCCGGCCACCCCCACCCGAGGCA--------------GAGACCGCGGCCGCCACTGGCCCATCCCCACATA----
--CCACACACGTATCCCCACCTCCTCAGATCCGAGCGCCATGGCCGCCCACCCCCACCCGCATTGCTATGCCCACCGCTA
GCGCCTCCATGGCCGCCGCCGCCTCCTGCCGGAGCCCGCTCGTCTGGTTCTTCTCCCTCGCCGCCGCGCTCTTCTTCGCT
TCCTGGTACCTCCTCCTCGACTCCGCCGCCGCCCCGGCCGCGCTCGATGCCCGCCGCCAGGGCCTCCGCCCGGCCTCTCC
AGGCAGAAAATGCGATCCGGATAAGGCGCTGCTGCGCGTCTACATGTACGACCTGCCCCTTGAGTTCCACTTCGGCATGC
TCGACTGGGAGCCCGGGAGCG---GCGGTGGCGGCCTTTGGCCGGATGTCAGGCACGGCGTGCCGGAGTACCCCGGAGGG
CTCAACCTGCAGCACAGCATCGAGTACTGGCTCACGCTGGACCTCCTCGCCTCCGAGCAGGGCGCGCCCACGCCGTGCAA
CGCCGTCCGGGTGCGCGACCCCGCCAGGGCCGACGTCGTCTTCGTGCCCTTCTTCGCCTCCCTCAGCTTCAACCGCCACT
CCAAGGTCGTGCCGCCCGCGCGGACCAGCGAGGACCGGGCGCTGCAGCGGAGGCTGATCGAGTTCCTCGCCGCGCGGCCC
GAGTGGCGGAGGTCCGGCGGAAGGGACCACGTCGTGCTCGCGCACCACCCCAACGGGATGCTCGACGCGCGCTACAAGCT
CTGGCCCTGCGTCTTCGTGCTCTGCGACTTCGGGAGGTACCCACACAGCGTGGCCAACATCGACAAGGACGTCATCGCCC
CGTACCGCCATGTCGTCGACAACTTCTTCAATGACTCCACCGGCTACCACGACCGGCCGACCTTACTCTACTTCCAAGGC
GCCATTTACAGGAAAGATGTGAGTACCCTTTGATGAAAGCTTACTTGTTTTAGCTTAAGCAGGGAATTAAGATCGTGGTG
TGATTAGTCAACTTCCATTTTTAATAATGTAGCTA------TTGGTTTTAAAACTTGCTTTGCATGTGTCGTT-C-CCTA
CATAGATTTCAGAATGTTTGCCATGTACTGGTCTGTAGCACGATTTGCTATTTAACCGATTTAAGTTTTAGTCAGTAGCA
CGATCCTAAACTAGCACGACCTCATCTGTAGTCTGGAGTCTGGACACCCTCCGTGGTACTTGATTTGGACTTCAATGATT
CTGGCTACGGGAAATATCGTAGTTGCAAATAATTGCCATTGGCATTGCCTTGTTCACTATCCAGCTGAGTTTGGTTGGCT
CGTCTTGCTCATTAATCCAGCTCACTTTGGTATGCTATCACTTCTTTCATGTGACTGTTACCTACTCCCTCCGTTCGGAA
TTACTTGTCTTGGATATGGATGTATCTAGAACTAAAATACATCTAGATACATCCATTTCTGCCACAAGTAATTCCGAACG
GAGGGAGTACTTATAAGCCCCGTTTATGTTATAGCTCTAGTGAGTCGCTTTAATACTTAAGAGGTTCTATAATCTGATAA
GGATGAGAATCCAAAATTGTGATTGTCGCTTTCACACATTTGTGGCA-GTAGTGTATAATATGGTTTATTAAGCAAGATA
TATGAATTATTGACTGTCTGAAAACCAAGGTCCTGAGAATGTATGATCTATGTGAAATATTGATGATTCTCATGGTTGTG
ATCTTTTGAATCACAACCTTGCAGGGTGGTTTCATCCGACAGGAACTTTACTATCTTCTCAAAGATGAGAAAGATGTGCA
CTTCTCATTTGGAAGTGTGGCTGGTAATGGGATTGAGGAATCGACACGGGGTATGAGGGCATCCAAATTCTGCCTCAACA
TTGCAGGGGATACGCCATCCTCCAACCGTCTATTCGATTCCATAGTCAGTCACTGTGTGCCCGTCATTATCAGCGATGAG
ATTGAACTCCCATTTGAAGATATCCTTGACTACTCCAAGTTCTGCATCATAGTGCGTGGTGCAGATGCTGTCAAGAAGGG
CTTTCTGATAAATCTGATCAAAGGGGTAAGCCCAGAAGAGTGGACAAGCATGTGGAACAAACTGAGGGAGGTAGAAGGGC
ACTTTGAATACCAGTACCCATCTCAGCCTGACGATGCTGTCCAGATGATCTGGAAGACCATAGCTCGAAAGGTGCCCTCA
ATTCGGCTGAAGGTCAACAGATTACAAAGATTTTCTCGGTCTGAAGCTAACAAAACAAACGATTCTCCAGCAAGATCTTC
CTGGCTAGAAAAT-----------------------CAAACTCTCCCAGCTGGTTTTCAGTCCTCTGCGAGAGGAGAGTG
CCCATAGTGAAGCTGAGCTTGAACCTCAAAGCCGGGAGCGACAGCTACAGGAGATTAATGGAGTAAAGTACTCCTGATAC
AGATTACCACCACAATATTACAGATCCGAGGGCCCGATTTTTGTTCTCCTCCAATTTTCATCGAAGATGTGCTCAACCGT
GTCGATTAGGGACAATAACTTTTTGTATCAGAATCTGTATATCCTAGGCAGTAGCGTGATTACTGATCATTTCCACTCTA
GTCTTAT---ACTACTTCACAGCTGTAACTCCCCATTCTCAGAGCAAGAG-TTTTTATGGTTCCTTGCTCGATTCTAGCC
ATGTGATATCTGCAGATGACCGGCATATGTCGTCCTTCCCTTCCATTATTGGGTC-ATGACAAGAATTGCTGCTGTTCAG
GCAATTGCATAGGTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>SNPs
--------------------S--------------------S--------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---------------------S-------------------------------------S---------S----------
---S-----------------------------------S-----------S--------------S-------------
-------------------------------------------SS-------------S----SSSSSSSS-----S---
---------------------S-------------------S----------------------------S---------
-------------------------------------------------S---S----S-------SSSSSSSSSS----
--------------------S-------------------------------------------------------SSSS
SS------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
----------------------------------------------------S---------------------------
------S--------------------S----------------------------------------------------
-------------------------------------------------------------------------S------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
-------S------------------------S-----------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------SSSSSSSSSSSSS--------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S------S----------------------------------------S---
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
---------------------S-----------------------------S----------------------------
------S----------------------------------------S--------------------------------
--S-----------------------S-----------------------------------------------------
-----------------------------------S--------------------------------------------
---------S----------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------S----------------------S--------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
------S------------------------S------------------------------------------------
----S-----S-------------------------------S-------------------------------------
-------SSS----------------------------------------S-----------------------------
-------------------------------------------------S-----S------------------------
----------------S-SSSSSSS-SSS-----------------------------S------------------S--
----------------------S-----------S-S--------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GTCCTTGCGTGGATCTGGAA---------
--------------------------------------------------------------------------------
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----------
>reverse_2730
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CGGAAGTGTGGCTGGTAATG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1381
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCAACCTGCAGCACAGCATA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>reverse_3288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------GGAAGCTGAGCTTGAACCTCA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
