>input_sequence_39063
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-----------------------------------------------------------ATGCTAGCCTCGCCGGCGCTC
GCCGGCGCCACCCACTCCTTCCCGGCCTTCGTGTCGGGCAGCCGCGGCATCCACCTCCCGTCCGTGTCCGCGCCCTCGCA
CTCGCCGGCGCGGCGGGCCGCCCTGGTCGTCCTCGCCAAGGCCAAGGTGTCCACGCCCAATGCCGACCGCATCGCCCGCC
ACGACCGCCTCCGCAAGAAGGTACTACC---AGTGAACCTCCGGCACGAAGATTGGGCTTCGTTGTTTTCTTGTCTCTTT
GCCAATGCGCGGCGATTTGTTTGATTGCAAGTATGGCGCGCCTG---CTCTCTCTATGGAGTTGATAGGGCAATGCCATG
CCGTTGAAGCGTTTGAGGAAATGTCTTTAGTTTGTTTCGGCAGTAGCTTCTTTA--------------GTTGCTGAACGT
CTGCAGTATGTCCGATTGGCCAC--------TTGAGCTCCTGTTGATGCATCTAGTTA----------------------
--GTTTTACAGAGAAGTATTTGTACCAATGGCTGCCACTGGATACAAGCAGAGTCAAGGGATTGCAATGTAGCGAGCGCA
TCTATAAAAGGGCATGCCACTTGTATCTAATCCCATGCCAGCTCAGATTCTGGGTGAGATTGGTGATGTAGAAGAGAGAT
GGTTAACTTCTATG--------TTGCACTAGATGCAAGCTTAGGCACACATATCAAGTATTTGACAC--AAAAATATATG
CATCGGAAAACTTTG-CACACGAACCAATTTAGAAGGATGGTTCAAAGGGTGACGAATGGTGTGATGT----TTACACTG
TACAAGCTTATGTTATTGTCAATGGAATCAGGACTTACATGGTCATTACACATTTTTCCTTTCAGGTTAGCGGCACCACA
GAGAGGCCAAGACTCAGCGTTTTCCGCTCAAACAAGCATTTGTATGCTCAGGTGATCGACGATACAAAGTCGTGCACTCT
GGCTTCAGCCTCAACAATGCACAAAGCTCTTTCAAAGGAGCTTGAGTACTCTGCTGGGCCAACAACTGTAAGTTGGTTTT
GAGTTGT-----CATACCTTTTCATTTCA-------TATTAAGCTAACATGGTCGCATAAT-------ATTTATCAACTT
GTTTTGTGATCCTGCGCTCCCTTGCGTA------------TATAAATGAAACTGTACAGTACTGTATACCATTTATTTTA
ACTGGCAGCACCTTTAGAAAAGAAATTTGTTCCAGTAAGGAATTACTGTCAAACTGGCTGTCTATTATACT-TCCTATGT
CATTTTTGTTTATAATAGAATTATCACCATGAGTCAAAG-AAAATTCCATCCAA----------------TAATATGACT
AAACCCAGGTTTGGTTAAACAATAAGAGATTTTGAGTGGTGGATCAACAAAGCGCCT--CTCTCTGTTTCCCTAGTTATA
TGTGGGTAATGCGACTCTG-GTTCATAAATAGAAGTTTGCCGTGGATGG-TCATGATTGTCCAATTGCTGGCATTGCGAT
GTTTTTCAATCAA-TCTAACAGCCATTC-----------ATCCACCAAGTCGAAGCCTACACTAGGT-GAGATGATTGGA
CCCGTATTGGCAGGGAAGTAGCTTCTAGTTAGGCTATTGGAACTCTGATAATCCGAGGGAACATTGTAGTACTAACGAAT
CTCCGAAGAAAACTTACAGATGTCTGTGCTTTGCACTGAGAAAATAAAAGATGATTATAACCTGTGTGGTTGCTTTTGAT
GATTTTAGACATCTAGCTTTCCGATGATACACATGT-TTTTGTGGGTTGTAGTCATAACATCTATGCTCTACAAGCCAAT
AAAGGCCCATGATGCTTTCTGGACAGTTGTTTTTACTGGTCTGTTGCAATATAGACAAAGATTAAAAAAAAACTTGCATC
TGTAGTTGTTTCTTAATGAAAGGCTTATGCTTAGTTTCTGATGGGAGTTCAATGTTGTGGTGCTTGGTTTCCAGGAAGTG
GCACAAAAGATTGGTGAAGTGATTGCCAAGTCCTGCTTGGAGAAAGGAATCACCAAAGTGGTCTTTGACCGAGGGGGTTT
CCTCTACCATGGCCGCATCAAAGCTCTAGCCGATGCTGCTAGAGAGAACGGGCTTGAGTTCTGA----------------
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>chr5D_1_TraesCS5D01G504600
ATTCCCATTTGGGATGCCATAAGCTCTAACCCAGGTATGTATGGTCTTGAATTCATATTCATCTATGGTTCGAATTGGCA
CAAAATCTTCCATCACCAATAGGTCATTGTTAAATCTCCATGGTCCAGCATCTAGTGCCTTTTCCTTATCAGCCTTTTGT
TGGAAGATAAATAGAAACCTATTCCTGCCCAAATATTTACAATCCACCCCA--CAATGGGCTCCAGAGT-CCCCTACAGT
TCTTCCCAGATGTTCAACCCTAGCAGGTCTCTCTGCAATAAGCTTGCCTACTGCCTGAAGCTTTCTCACCAGTGAGGAGC
ATGCTTGTTTCCTACCAATCCTGATCCCCTTCTTTTCCGCTTCAGAGAGTTGCAGGTTCTT-------CCCTTCACTCCT
TCAAGGTATGTGGTCCTCAGGTCCCCC-ATTGCAGCTGATAGATGCTAGGTCAGCCGCTCCACCGCAGCCCCCTTCATGC
CTCCAAATCTGGCGCCGC-----CACACACCACAACATGCTCCCAAAATCCTCTCTTTTCCTCACCAGGTTGTTCTAAAT
CGGATCTGGATGGGGCTCTCACACTTGCTGGGGGAGGACTGGAATCTATGCACGAGATGGTGTGAAGGAGAATCAGGGCG
ATTTTGTGTTTGTTTCG-TGGAAAAC-GAATGGGGATTGAGCGGCAAGGGTTACCGACAGGGACACGCACTGAGTCGCCA
CACTGTCGCCAGAAGCAGCAAGAAACACCGTCACACGTGTAG--------------------GGGGAAATGAAGTTGTGA
AGCTTGAAGATTGATGAAGTCA----------------------------------------------------------
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------------------------------------------------------------------------TAAGACGC
CTTGTTATACCGTGTGTATTTTGCTTTTAT--TTGTTCTATGAAATGATACGTAGAA--AAATGA-CAAAGTCTGAGGTC
TTTTCCGTAATTCGGTCCAGCAG--AGCAGAGCAGAGCAGCTTAAAGAAACGCGAGACGGTGGATAGGATAAGGCGAGCC
ATTAGGCGCGTGAGACGGCGAACCCCAGCGACCAGCAGCGCAG----CGCAAGTGAGCCATGCTAGCCTCGCCGGCGCTC
GCCGGCGCCACCCACTCCTTCCCGGCCTTCGTGTCGGGCAGCCGCGGCATCCACCTCCCGTCCGTGTCCGCGCCCTCGCA
CTCGCCGGCGCGGCGGGCCGCCCTGGTCGTCCTCGCCAAGGCCAAGGTGTCCACGCCCAATGCCGACCGCATCGCCCGCC
ACGACCGCCTCCGCAAGAAGGTACTACC---AGTGAACCTCCGGCACGAAGATTGGGCTTCGTTGTTTTCTTGTCTCTTT
GCCAATGCGCGGCGATTTGTTTGATTGCAAGTATGGCGCGCCTG---CTCTCTCTATGGAGTTGATAGGGCAATGCCATG
CCGTTGAAGCGTTTGAGGAAATGTCTTTAGTTTGTTTCGGCAGTAGCTTCTTTA--------------GTTGCTGAACGT
CTGCAGTATGTCCGATTGGCCAC--------TTGAGCTCCTGTTGATGCATCTAGTTA----------------------
--GTTTTACAGAGAAGTATTTGTACCAATGGCTGCCACTGGATACAAGCAGAGTCAAGGGATTGCAATGTAGCGAGCGCA
TCTATAAAAGGGCATGCCACTTGTATCTAATCCCATGCCAGCTCAGATTCTGGGTGAGATTGGTGATGTAGAAGAGAGAT
GGTTAACTTCTATG--------TTGCACTAGATGCAAGCTTAGGCACACATATCAAGTATTTGACAC--AAAAATATATG
CATCGGAAAACTTTG-CACACGAACCAATTTAGAAGGATGGTTCAAAGGGTGACGAATGGTGTGATGT----TTACACTG
TACAAGCTTATGTTATTGTCAATGGAATCAGGACTTACATGGTCATTACACATTTTTCCTTTCAGGTTAGCGGCACCACA
GAGAGGCCAAGACTCAGCGTTTTCCGCTCAAACAAGCATTTGTATGCTCAGGTGATCGACGATACAAAGTCGTGCACTCT
GGCTTCAGCCTCAACAATGCACAAAGCTCTTTCAAAGGAGCTTGAGTACTCTGCTGGGCCAACAACTGTAAGTTGGTTTT
GAGTTGT-----CATACCTTTTCATTTCA-------TATTAAGCTAACATGGTCGCATAAT-------ATTTATCAACTT
GTTTTGTGATCCTGCGCTCCCTTGCGTA------------TATAAATGAAACTGTACAGTACTGTATACCATTTATTTTA
ACTGGCAGCACCTTTAGAAAAGAAATTTGTTCCAGTAAGGAATTACTGTCAAACTGGCTGTCTATTATACT-TCCTATGT
CATTTTTGTTTATAATAGAATTATCACCATGAGTCAAAG-AAAATTCCATCCAA----------------TAATATGACT
AAACCCAGGTTTGGTTAAACAATAAGAGATTTTGAGTGGTGGATCAACAAAGCGCCT--CTCTCTGTTTCCCTAGTTATA
TGTGGGTAATGCGACTCTG-GTTCATAAATAGAAGTTTGCCGTGGATGG-TCATGATTGTCCAATTGCTGGCATTGCGAT
GTTTTTCAATCAA-TCTAACAGCCATTC-----------ATCCACCAAGTCGAAGCCTACACTAGGT-GAGATGATTGGA
CCCGTATTGGCAGGGAAGTAGCTTCTAGTTAGGCTATTGGAACTCTGATAATCCGAGGGAACATTGTAGTACTAACGAAT
CTCCGAAGAAAACTTACAGATGTCTGTGCTTTGCACTGAGAAAATAAAAGATGATTATAACCTGTGTGGTTGCTTTTGAT
GATTTTAGACATCTAGCTTTCCGATGATACACATGT-TTTTGTGGGTTGTAGTCATAACATCTATGCTCTACAAGCCAAT
AAAGGCCCATGATGCTTTCTGGACAGTTGTTTTTACTGGTCTGTTGCAATATAGACAAAGATTAAAAAAAAACTTGCATC
TGTAGTTGTTTCTTAATGAAAGGCTTATGCTTAGTTTCTGATGGGAGTTCAATGTTGTGGTGCTTGGTTTCCAGGAAGTG
GCACAAAAGATTGGTGAAGTGATTGCCAAGTCCTGCTTGGAGAAAGGAATCACCAAAGTGGTCTTTGACCGAGGGGGTTT
CCTCTACCATGGCCGCATCAAAGCTCTAGCCGATGCTGCTAGAGAGAACGGGCTTGAGTTCTGAA-TTTTCTGTTGATAT
TTTCAGGATCGCATGTAATATTCTCTTTTCTTTCCCGTTTATTGAACGAAGTTCTTTCTGTAGTCATTTGGGTTGTTCTG
CAGACATGGCCCCTCCCCTCTTTAATGTTATCTGATCTTTGTATCAACATTGAATCAGCCTTGCAAATGGAAGATTCATT
TTCTGTCTATTTCTGACACTTTGGTTTCTGCCCATGCGACCTTGCAAA-CCAGCACCTGGAAATGGAGTATTCAGTCTGC
GAGCTTGGGCAAAATAACTAGGGAT--------ACTTTAGCAGCTTCCATGCTTTAGTACTACTAGTAGGAGTAGATAAC
AGATACAGATGAGATGTCTATAAGCCTCTTTGTTATTGGCATGTCAAATCCTGATTACAGAATTAATAAGCACTACACAG
TAATGCATCTCTGCTTGTTTCCTGAAACTAGA---TATATACATGGTGTACTCTGTCCGTGAATAAGTGTACTTCTATAT
TCAGTTCTAAGTCAAAAATTTAAAATTTTGACCAACTTTATAGAAAATAGAAGTAGCATATATGACATCAAATTGGTATA
CTGTGAAAGTACATTTCAAAACGAATCTAGTGATACTACTTTAATGCCATAAATGCTGCTACTTTTTCCTATAAA-----
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-------------------------------TGCTGCTACTTTAATGCCATAAATGAAGATAACATCAATCCGCACCGTC
CTCTTGGTCCCTGTCAATCATATC--------TGTGCATCATCTGCAGCAAATAGATACGAGTCGGGAGGAATTGCAAAA
GGTGCCACATGTATTATCTAGAT---------------------------------------------------------
-----------------TAAAAAAATTAAGTAATCAGTAAATTGAGGAATGGGGCAAATGATCAACAAATCCAAGTAAAC
TGGGGGCTAATCATGTAATCCTAACTAAAAGGGAGCAAATGATCAAGTCCCCAAATAATGCGGGGCAAATGATCAAATCT
CCTGACACCAAAAGGCAATATGCACCGACAATGGCTCGAAACACACCCTTCTGAAATGAGCATCAAGCCAAGTTT
>chr4B_1
ATTCCAA-TTGGGATGCCGTAAGCTCTAACCCAAATAGGTATTGTCTTGAATTCATATTCATCTATGGTTCTACTTGGCA
CAAAATCTTCCATCACCAATAGGTCATTGTTAAATCTCCATGGTCCAACATCTAGTGCCTTTTCCTTATCAGCCTTTTGT
TGGAAAATAAATAGAAATCTATTCCTACCCAAGTCTTTGCAATCCACCCCAAACAATGGGCTCCAGACTCCCCCTAGAGT
TCTTCCCACATGTTCAGCCCTAGCAGGCCTCTCTGCAAATAGCTTGCCTACTGCCTGAATCTTACTCACCTGAGAGGAGC
ATGCTTGCTTCCTACCAATCCTGATCCCTTTCTTTTCCGCTTCACAGAGCTGCAGGTTCTTGAACTTAATCTCCACTCCT
TCCATGTATGCTGCCATCAGGTCCCCCCAATGCAGGTGATGGCTGCTGGGTTCGCCTCTCCACCGTAGCCCCCTTCACGC
CTCCAAATATGCCGCCGC-----CACACCCCACAACCTCCTCCCAAAATCCTCTCTATTCCTCACCAGGTTGTTCCGAAT
CAGATCTGGATAGGGCTCTCACACTTGCTGGAGGAGGATAGGAATCTCTGTATGGGGCGGTGGGAAGGAGAATCAGGGCG
ATTTTGTGTATGTTTTTTTGGAAAAC-AGATGGGGATTGAACGTGAAGGGTTGCCGACGAGAACGCGCACTGAGTCGCCA
CACAGTCGCTAGAAGCAGCGAGAAACAC----------------------------------------------------
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>chr5B_4
---CCCATTTGGGATGCCGTAAGCTCTAACCTAGATATGTATGGTCTTGAATTCATATTCATCTATGGTTCGAATTAGCA
CAAAATCTTCCATCACCAATAGGTCATTGCTAAATCTCCATGGCACGACATCTATTGCCTTTTCTTTATCAACCTTTTGT
TGGAAGATAAATAGAAATCTAGTCCTGCCCAAATCTTCACAATCCACCCCA--CAATGGGCTGCAGACT-CCCCAAGAGT
TCTTCCCACATGTTCAACCCTAGTAG-TCTCTCTACAATAAGCTTGCCTACTGCTTGAAGCTTGCTCACCTATGAGGAGC
ATGCTTGCTTCCTACCAATCCCGATCCCCTTCGTTTCCGCTTCGAAGAGCTGCAAGTTCTTGAGTTTGCCCTCCACTCCT
TCAAGGTATGCGGTCGTGAGGTCCCCC-ATTGCAGCTGATAGATGTTAGGTCAGCCGCTCCACTGTAGCCCCCTTCACG-
CTCCAAATCTGTCACCGC-----CACACACCACAACCTGCTCCCAAAATCCTCTCTATTCCTCACCAGGTTGTTCTAAAT
CAAATCTGGAT-GGGCTCTCACACTTGCCGGAGGAGGACTGGAATCTATGCACGAGATGGTGGGAAGGAGAATCAGGGCG
ATTTTGTGTTTGTTTCG-TGGAAACC-GGATGGGGATTGTGTGGGAAGGGTTGCCGACGAGGACGCGCACTCAGTCGCCA
CGCAGTCTCCAGAAGCAGCGAGAAGCACCGTCACGCGCGGACGGACGGAAGGCATGTGTGGCGGGGAAATGAAGTTGTGG
AGCTTGAAGATTGATGAAGACATAAGGGCATCTCCAGCCGCGCCCCCAGGAAGGCCTCCCCAGGCGATTTTTTCGTGCCG
GCGCCGAAAAAACGGCCCAGTCGCGCCCCCGGAGCCCGATTTTCGCCGGCTTGGGCCGAAAACAGCGCCGGCGGACTCAG
CCCGAACCCGGCGCGCTGGGGGGCGCCCGGGGGCACCGGGGCGAGCTGTTTTGGCGTGAAAAAGACGCGGGCCAGCCGCG
TCAGCGACTCGGCGCCTCGTCTTCCCCCAACGGCCTCGGTTCCCGCGGGGAATCAATGGCAAGGCTGCCGCCGGTCAGCC
TTGCCATAGATTCCTCATGGGCGGCGCTTCACGGGACGGCGCACCGACGCCTTCCCTCCCTCGCACGCGTACACACGGGC
GCGGCCCGGCTATAAAAGCCGGCGGCCTCCACTCGCCTGTGCCCATACCAGCCCCGCCCCTCGCCGCCGTCCAGCCCCTC
CCTCTCCCTGCCTCTCCCGAGCGCCACCGCCCAGCCCCTCCCTCTACCTCTTCCGAGCCCGCCCAGCCCCGTCGTCGCCA
TGGCAGAACGCTTCCCCGGAGACGAGGCGGCGGCCAACGGCTTCGGCCGCCGTTCGCTCCGCGAACAGGAGTCCTGGCTC
CTGTTCCAGGCGAACATCCCGGTGCCGCCGGACATGCGCGCCGGGCCAACGGGGTGGAGACTCAGCGCCGGGGGAGTGCC
CATTCCCCCGTTGCCCGACGCCGTGGCGAAGCCGAAGTACTTCGCCGAGGAGGTCGAGATCGTGCGCGCATCCCTCACCG
ACGCCCAACTCTCCCTCCCCCAGTACGCCGCCGACAACCACGCGGCCTGGGCGGCGTATTTCAAGCGCCGCCAACAGCAG
CGATTGGCGTCCACCAACGGCGCGCCGGTGGTCGGCGGCCGGCAGAACAGCGAGGGGCGCCACCTCTGGTGGGGCGTCCC
CGGCCGCACACTCGAGGGCGTGTTCACGTACCTCGAGGGCGGCAACGACCCGCCGTTGGCGTACCCTCGGCGCAGCACCG
ACGCGTCGGGCCATGGGCGCCAAGGAGGTTCGGGTCCTCCTCCTCCTCTTCCTTCTCCCGATCCTCATCGCACTCCTCCG
GCACTCCGACCCTGCTCGGCGTCAAGGCCGAGCCCGCGGCGGAGTCGCCGCTAGGCCGGCGCACTCGCAGCGCCGGCATC
GTCATCAACGAGGGCGGCCGGCGCGCCTCCTCCTCGTCGGCTCCTCCGCGCTTCGTCAAGCCGAAGACGGAGCCGAGGCT
GGCGCCGGTGAAGACGGAGCCGGGGCTGGCGCCGGTGAAGGCGGAGTTCGACGACGACGACGCGGCCCTAGAATGGGCGC
GCCAGGACTCCATTGCGATGGAGAAGGCGCGCCAGGAGAAGGTGAAGGAGCACCAGCGCGCCGCCCTGCGCCGCTTCGAG
GAGCGCTGACGCGGCCGCGATGAAGACGGGGTCGTCGTCCTATGCGACAGCGACGACGACGACGACGACGCGCCGCCGCC
AGTCCGCCATGGCGACGCCGGGTCCAGCAGGGGCGCCCGCGTCAAGGAGGAGAAGGCCGACGACGACGATGGCGGCGACG
ACTTCAGCCCCTTTCTTTTTTAGATTAGGTTAATGTACTGAAAATGCGCGAATTTCGCCGAAATTTGCCATGTTTAGCCG
AAATTTAGCCCTTTTTTTTTAATACGCGCCTGGGGGCGGCCCTGGGGCCCGACGGCTGGGGACCGACTCGCCCCCAGGGC
CATTTTTTGCGCCGGCTCACCCCAGGCGGCGCTTTTAGACGCCCCCTGGGGGGCCAACGGCTGGAGATGCCCTAAGACGC
CTTGTCATACTATGTGTATTTTGCTTTTCTTTTTGTTCTATGAGACGATAC-TAGAA--AAATGACCAAAGTATGAGGTT
GTTTCTGTAATTCGGTCCAGCAGACAGCAGCGCAGAGCAGCTTAAAGAAACGCGAGAGGGTGGATAGGATAAGGCGAGCC
ATTAGGCGCGTGAGACGGCGAACCCCAGCGACCAGCAGCGCAGAGCGCGCAAGTGAGCCATGCTAGCCTCGCCGGCGCTC
GCCGGCGCCACCCACTCCTTCCCGGCCTTCGTGTCGGGCAGCCGCGGCGTCCACCTCCCGTGCGCCTCCGCGCCCTCGCA
CTCGCCGGCGCGGCGGGCCGCCCTGGTCGTCCTCGCCAAAGCCAAGGTGTCCACGCCCAATGCCGACCGCATCGCCCGCC
ACGACCGCCTCCGCAAGAAGGTACTAGTACTAGTGAACCTCCGGGAAGAAGATTGGCATCCAGTATTTTCAAGTCTCTCT
TCCAATGCGCGGTCAATGGTTTCGCTGGAAGCGCGCGCGTTCTCTCTCTCTCTCTATGGAATTCATAGGGCAATGCCATG
CCGTTAAAGCGTTTGACGAAATGTCCTTAGTTTGTTGCGGCTGTAGCTTACATTTGGATGTTCGAATGCCTACAAGCTGT
CTGG-------------------TTGGGCGCTTGAGCTCCTGTTGACGCAC----------------TGCCTCCCGTAGT
TAGTTTTACATACAAGTGTTTCAACCAATGACTGCCACTGGATACAGGCAGAATCAGGGGGTTGCCATG-----------
-------------------------------------------------------------------GTGGACAGGAGCG
GGTTAAGTTATATCTTACATTCTTGCAGGAAATGCAAGC-TAGGCACAGAAACCAAGTGTTGTAGAA--ACACAAAAGGG
CATGCACTTGAATTTAGGATAGAAACCAAGACAAAAACAGTTTCAGAGGGTGACGAATGGTGCTATGTGCATTTACATTG
TATATGCTTATGTTTTTGCCAATGGAATCAGGCCTTTGT--GTCATTGTACATAATTCCTTTCAGGTTAGCGGCACCACG
GAGAGGCCAAGACTCAGCGTTTTCCGCTCAAACAAGCATTTGTATGCTCAGGTGATCGACGATACAAAGTCGTGCACTCT
GGCTTCAGCCTCAACAATGCACAAAGCTCTTTCAAAGGAGCTTGAGTACTCTGCTGGGCCAACAACTGTAAGTTTTATTA
TTTTTAGTTATCCATACCTTTTTGTTTCATACTCCGTATTAAGCTAATATGGTCCTAGAATAATGCACATTTATCAACTA
GTTTTGTGATCCTATGCTCGCTTGCGTA------------T--------------ACAGTATTGTATACC----ATTTTA
ACTGGCAGCACCTTTGGAAAAGAAATTAGTTTCAGTTAGGACTTGCAGTCAAACTGGCTCTCTATTATACTCTCCTATAT
CATTTTTGTTTATCATAGACTTATCACCATGAATCTAATAAAAGTTTCATCCAA----------------AAAT-TGACC
AAACCCAGGTTTAATTGAACGAATAGAGATTTTGAGAGGTGGAACAATAAAGCACCTTTCTCTCTGTTTCCCTATTTATA
TTTGAGCAATAAGACTCATAGTTCATAAATAGACGTTTGCCATAGATGATTCATGATTGTTCAATTGCTGGCATTGCGAT
ATTTTTCAGTCAATCAAATGACCATTA-TTAGTTCTTTGATTCACCGAGTCGAAGCCTACACTAGGT-GAGATGATTGGA
GCCATATTGGCAGGGCAGTAGCTTCTAGGTAGACTATTGAAACTCTGATAATCCAAGGGAACATTGTACTGATGT---AT
CTCCGAAGAATACTCATGGAAATCCGTGCTCTGCACTCAGAAAATAAAAGATGATTATAACCTGTGTGGTTGCTTTTGAT
GATTTTAGACATCTAGCTTTCCGATGATACACATGT-TTTTGTGGGTTGTACTCATAACATCTATGCTCTACAAGCCAGT
AAAGGCCCATGATGCTTTCTGGACAGTTGTTTTTACTGGTCTGTTGCAATATAGACAAAGATTAAAAAAAA-CTTGCATA
TGTAGTTGTTTCTTAATGAAAGGCTTATGCTTAGTTTCTGACGAGAGTTCAATGTTGCGGTGCTTGGTTTCCAGGAAGTG
GCACAAAAGATTGGTGAAGTGATTGCCAAGTCCTGCTTGGAGAAAGGAATCACCAAAGTGGTGTTTGACCGAGGGGGTTT
CCTCTACCATGGCCGCATCAAAGCTCTAGCCGATGCTGCTAGAGAGAACGGACTTGAGTTCTGAA-TTTTCTGTTGATAT
TTTCAGGATCGCATGTAATATTCTCTTTTCTTTCCCGTCTATTGAACAAAGTTCTTTCTGTAGTCATTTGGGTTGTTCCG
CGGACATGG-----CCCCTCTTTAATGTTATCTGATCTTTGTATCAACAATGAATCAGCCTTACAAATGGAAGATTCATT
TTCTGTTTATTTCTG-CAATTTGGCTTCTGCCGAAGCAGCCTTGTAAAACCAACACTTTGAACATGAACATTCAGAGTGC
CGATTTGAGCAAAATAACTGAGAAGAATCACACACTTTGGCAGCTTCAACAC-TTAGTACTACTAGTAG-----------
-------------ATATCTGGAAGCCTCT---TTGTTGGCATGTGAAATCCTGATTACGGAATTCATATG---TACACAG
TAATGCATCTGTGCTTGTTTTCTGAAAGATAGGAGTATATATATGGTTTAT-----------------------------
------------------------------------------------------------------ATCATTTTGGTAGC
TGATAAGAGATACACCAGTAATTGGGATACACTGATTGGTCCCTAGACTAGGCTGATGACAACCAAGCATTATTAGAGCA
GTAATTACGGTGACGCTGAAGTTTTAGTCTTTCAG---------------------------------------------
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----------------------------------------------------AGCAACACGCCCATAGCTTGCATAAACG
TGCTGATTGCAGGGAGGCATCATCTGTTACAAAT----------------------------------------------
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-------------------------------------------------ATAAATGAAGATAACATCAATCCACACCGTC
CTCTTGGTCGCTGTCAATCATATCATGGTATTTGTTCATCATCTGTAGCAAATGGATACA-------AGGAATTGCAAAA
GGTGCCACATATGTTACCCCCTCCAATCCAAATTAATTGTCGCAGCCATAGTACAATTTTGTAAAATTAATTTGAATTAA
AGGGAGTATCTGGAATAT-AAAAGATTAAGTAATCAGTAAATTGAGGAATAGGGCAAATGGTCAACAAATCCAAGTAAAA
TGGGGGCTAATCATGTAATCCTAAGTAAAGGGAAGCAAATGATCAAGTCCCCAAATAATGCGGGGCAAATGATCAA----
---------------------------------------------------------------------------
>chr2A_4
CCCAT----TGGGACGCCATACGCTCTTACCCATATTGGTATTGTCCTGAATTCATATTCATCTATTGTTTTACTAGGCA
CGAAATCTTCCATCACCAACAGGTCGTTGTTAAATCTCCATGGTCCAGCATCTAGTGCTTTTTCCTTGTCAGCTCTTTGT
TGGAAAATAAACAAAAATCGATTTCTGCCCAGGTCTTTGCATTCCACTCCAAATAATGGACTCCAGACTACCCCTAAGGT
TCTTCCCACATGTTCTGCCCTAGCAGGTCTCTCTGAAATTAGTTTACCTACTGCCTGTAGCTTGCTCACCTATGAGGAAC
ATGCATGTTTCCTGCCAATCTTGATCCCCTTCTTCTCCGCTTCGGATAGCTGCAGATTCTTGAGCTTGCCCTTCACTCCT
CCAAGGTATACTGCCTTCAGGTCCCCC-ATTGCAGCTGGGAGCAGCTGGGTTCACCACTCCCGAGCAGTCCCCTCTACGC
CCCCAAATCTGCCGCCGTCGCCACACACACCAGATCTTGCTCCTGAAATCCTTTCTGTTCCTCACTCACTTATTCCAACT
CAGATCTGTTCA---CTCTCACAATCGCTAGAATAGGACTGGAATTAGACTCTAGAT-GGGAGGAAAAGGAATTAGGATT
GTTGTGTGTTTGTTTTG-TGGAAGATTGGATGGGGATTGAACGGCAAAAGTTGCCGACGAGGTCGCGTACAAAGACGCCA
AGAAGTCGCCAGAACCAGCGAGACAGCCG---------------------------------------------------
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-----------------------------TCACGTGTA------------------------------------------
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>chr4A_769
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------AAGATTGACGAAGCCA----------------------------------------------------------
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------------------------------------------------------------------------TAAGAAGC
CTTGTTACACTGTATGTATTTTCCTTTTCT--CTGCTCTACGGGACGATATATGTTCACAAATGACCAAAGTACGAGGTC
TTTTCTGTAATTCGGTC-------CAGCAGAGCAGAGCAGCTTAAAGAAACGCGAGAGGGTGGATAGGATAAGGCGAGCC
ATTAGGCGCGTGAGACGACGAACCCCAGCGACCAGCAGAGCAGCGCA---AAGTGAGCCATGCTAGCCTCGCCGGCGCTC
GCCGGCGCCACCCACTCCTTCCCGGCCTTCGTGTCGGGCAGCCGCGGCGTCCACCTCCCGTCCGCCTCCGCGCCCTCGCA
CTCGCCGGCGCGGCGGGCCGCCCTGGTCGTCCTCGCCAAGGCCAAGGTGTCCACGCCCAATGCCGACCGCATCGCCCGCC
ACGACCGTCTCCGCAAGAAGGTACTAGTACTAGTGAACCTCCGGGACGAAGATTGGCCTCCGTTATTTT-AAGTCTCTCT
TCCAATACGCGGTCAATTGTTTCACTGGAAGCGCGCGCG------CTCTCTCTGCATGGAGTTGATAGGGCAATGCCATG
CCGTTAAAGCGTTTGACGAAATGTCCTTAGTTTATTGCGGCAGTAAATTAAACGCAGATGTCTTTCGTGTTGCTGAACGT
CTGCAATATGTCAGATTGGGCACTTGAGCAGTTGAGCTCCTGTTGATGCATCTAGTTACCATACAAGTGCCTCCCATGGT
TAGTTTTGCAGAGAATTGTTTGTACCAGTGACTGCCGCCGGATGTAGGCAGAGTCGAGGGATTGCAATGTAGCTAGCGCA
TCTATAAAACGCCATGCCACTTGTATGTAATCCTATGCCAACTCAGATTCTTGGTGAGGTTGGTGATGTAGAAGAGAGAT
GGTTAACTTA-ATG--------TTGCACTAGATGCAATC-TAGGCACACAAATCGAGTGATTGGACACAAAAATTATATG
CATCGGAAAACTTTTCCACACCAACCAAGATAGAAGGATGGTTCAATGGGTGACGAATGGTGTGATGT----TTACACTG
TATAAGCTTATATTATTGTCAATGGAATCAGGACTGATATGGTCATTACACATTTTCCCTTTCAGGTGAGTGGCACCACA
GAGAGGCCAAGACTGAGCGTTTTCCGCTCAAACAAGCATTTGTATGCTCAGGTGATCGACGATACAAAGTCATGCACTCT
GGCTTCTGCCTCAACAATGCACAAAGCTCTTTCAAAGGAGCTTGAGTACTCTGCTGGGCCAACAACTGTAAGTTGGTTTT
GAGTTGTATTTTCA-----------TTCA-------TATTAAGCTAATATGGCCGCAACAT-------AA-TATCAACTT
GTTTTGCGGTTCTATGTTCCCTTTCGTATAAATAAGACTGT--------------ACAGTACTGTATACC----ATTTTA
ACTGGCTGAACCTTTGGAAAAGAAATTGGTTTCAGTAAGGAATTGCTGTCAAACTCACTGTCTGTTATACTCCCCTATAT
ATTTTTTGTTTATAATAGAATTGTCACTAGGAGTCTAAGCAGAATTTTAGATTTATCATTGTACATTCCCAAAA-TGACC
AAA------------------------------------------------------------CTTGTTTCCTATTTATA
TGTGGGTAATTCAACA-------------------TTTGCTATAGATA-------ATTGTACAATTGCTGGCATTGTGAC
ATTTTTCAGTCAAATCAAACGGCCATTCTTAGTTCTTATATCCACCAAGTTGAAGCCTACACTAGGTGGAGATGAGTGGA
GCCATATTGGCAAGGCAGTAGCTTCTAGATAGACTATTGGAACTTGGATATTT-GAGGGAACATTGTACTGATGT---AT
CTCTCAAGAGAACTTGTAGAGGTCTGTGCTCTGTTTTCAGAAAATAAAAGATGCTTCTAACTTGTATGGTTGCTTCTGCT
GGTTTTAGACATCTAGGTTTTCAGTGACAGAACTTGCTTTTGTGCGATACACTAATAACATCAATGTTCTACAAGTCTGT
AGAGGCCCATGATGCTCTGAGGACATTTGTTTTTGGTGTATTGCAATCAACAAACT------------AAAACTTGCATC
TGTAATTGTTTGTTACTCAAAGGCAC-TGCTTAGTTTCTGATGATAGTTCAATGTTGTGGTGCTTGGTTTCCAGGAAGTG
GCACAAAAGATTGGTGAAGTGATAGCCAAGTCCTGCTTGGAGAAAGGAATCACCAAAGTGGTCTTTGACCGAGGGGGTTT
CCTCTACCATGGCCGCATCAAAGCTCTAGCCGATGCTGCTAGAGAGAATGGGCTCGAGTTCTGAATTTTCCTGTTGATAT
TTCCAGGGTCGCATGTAATATTCTCTCTTTTTTCCCGTCTGTTTGAACAATC-CTTTCTGTAGTCATTGGAGTCGCTCTG
CAGACATGG-----CCCCTCTTTAATGTTATCTGATCTTTGTATCAACATTGAATCAGCGTTGCAAATGGAAGATTCATT
TTCTGTCTATTTCTG-CACTTTGGCTTCTGCCCATGCAACCTTGTAAA-CCAACACTTGGAAATGGAGTATTCAGTCTGC
GAGCTTGGGCAAAATAACTGAGAAGAATCATGCACTTAAGCAGATTTAATAGTTTAGTACTGCTAGTTGGAAGAGAGAAC
AGAAACAGGTGCGATATCTGTAAACCTCTTTGTTATTGGCATGTCAAATACTGAGTACAGAATTCCAATC----ACACAG
TAATTCATCTATGCTTGTTACCTGAAACTAGA---TATATACATGATGTAT-----------------------------
------------------------------------------------------------------ATCATTTTGGTAGC
TGA---------------TAATTGGGATACACTGATTGGTCCCTAGACTACGCTGACGGCAACCAAGCATTATTAGAGCA
GTAATTATGGTGACGCCGAAGTTTCAGGCTTTCAG---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------AGCAACACGCTGATAGCTTGCATAAACG
TGCTGGTTGCAAGGAGGCA----CTGTCACAAAT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATAAATGAAGATAACATCAATCCGCACCGTC
CTCTTGGTCTCTGTCAATCATATCATGATATCTGTGCATCATCTGCAGCAAATAGATACGAGCGGGGAGGAATTGCAAAA
GGTGCCAAATGTACTATGTGGAT---------------------------------------------------------
-----------------T-AAAAAATTAAGTAATCAGTAAATTGATGAATAGGGCAAATGATCAACAATTCCAGGTAAAA
TGGGGGCTAATCAAGTAATCCCAAGTAAAGGGTTGCAAATGATAAGTCCCT------------GGCAAATGATCAAATTT
CCCGACAGCAAAAGGCA---------------------AAACACACCCTTCTGAAATGAGCATCAAGCCAAGTTT
>chr4D_3485
--------------------------------------------------------------------------------
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--------------------------------------------------CTCCGTCCGTGAATAAGTGTACATCTACCT
TTTGTCCTAAGTCAAAGTTTTCAAAATTTGACCAACTTTATAGAAAAGAGTAGTGACATATATAACATCAAATTGGTATA
TTATGAAAGTACATTTCAAAACGAATCTAGTGATACTAATTTAGTGCCATAAATGCTGCTACTTTTCCCTATAAAGTTGG
TCAAAATTATAAAACTTTGACTTAGGACAAAAGCTAGAAGTATACTTATTCGCGGACGGAGGGAGTATATGATATGATTA
CATTTGTGGTCTCGCAGCCATTTGTATGTGTATGATGATGACATTTGTATGTGCTAAAGATTTTTGTATAAAGCCTGTTT
AAATACAAAACAAATATGCAGAAAAAAATCAGAAACTAATAAAATTAGCAGTAGCTATGGGAGTAAAGTTAGCAGCAGCG
TGCCGTTAGCAGTAGCGCGGCTTAATACAGAGCACTAGAGCTATTAGCAGTAGTGCGCTGTTCTACAGCTCGCTACTACT
ACGCTTGTATAGTAGTAGCGCGGGCCAACACGCGCCGCTGCTACAGATTAGCTGTAGCAACGTATCAGTAGTGCGGGTCC
CCGTGCTATTGCTATACTTAAAACCCGCGCTACTGCTAGGCTTTTTCCTAGTATGTTCATAAGCTGCAAGTGCATGGATC
ACCGTAATATCTTTTGCTACAAGCATTAACCTGGGATTTATGAATCACGAGAGCAAAGGATGAGTGTCATAACTTTTCGT
ACAGCTAGATTTGTTGGACATTAGTCGTGTTTGCACCCAAGTAGCTCTTGAAAATAACTTACTACTAAACCTCGCCTCTT
ATGAGGCGGTGAGAATAATGATAGGAAAACCTAAACTAATGAAACTAGGCTAAAAGCAACAATTAAAGCGAAAATACAAA
GGTGAACATGGTGCGCGCCTACCCACGTGAATAGTAAATTAATAAAAATACTAGAAAAAGTTAAAAATTTCTGAAACTTC
GTGGTATAAAACTTAGTAGATCATTCTATTCACGTGTGAAGTTTCATGATGTATTGACACCCACGGTATTTCTAGTGAAG
AAAATACAAATTCGACCATACTATTCATTAAACAATGTTTTTTAATATAGCATCAATTTTGTCATTTTTGTCTAGATTAC
CACAAATGTGATTTTTTTCGTGAAACTTCATATGCGAGTATACCGGATTGCTATGTATATTACAAAAATAAATTCAGATT
TTTTTGATTTTTTTTCTAGTATTTTTTGAATTTACTATTCATAAAGGATGCGCGCGCACCCATGTTCACCAAATCCGCAT
CGCAATTAAAGAAGCAACACAAACGGTAAATGAGACGATGATTAATAAACGACTTTAGGCAAGCGGCTACCTAAACGACA
GTAACACAAAACATATGCTATATGCCTACGACTACCCACAATGGGAGTAACATAGGTAGTAACATCACACATATCTAGAT
AAAATATATGATGTGACAAGCAATAAATGAAGAAAGAGAGGCATGTACTCCCTCCTACCGCGAATAAGTGTACTTCTATC
ATTTGTCCTAAGTCAAAATTTTATAATTTTGACCAAATTTTTAGAAAAGAGTAGTAGTATATATGACATCAAAATGGTAT
ATTATGAAAATACATTTCAAAACGAATCTAGTGATACTAATTTAGTGCCATAAATGCTGCTACTTTTTCCTATAAA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-----------------S----------------S--------------------------------S--------S---
--------S------------------------------------------------------S------S---------
-------------------------------------------------S------------------------------
----------S----S-------------------------------------------------------------S--
-----------S------------------------S-------------------S-----------------------
-S---------S-------------------S------------------------------S-----------------
----------------------------S-----------------------S-----SS----S---------------
---S---------------S--------------S--S-S-S-------------------------------------S
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------------S--------------S-S-----S--------------------S-------
-----S---------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------------------------------------------S---------------SS--------------
--------------------------------------------------------------------------------
--------------------------SS----------------S-----------S--S----S-----SS------S-
S-----------SS-S------S-S--S---SSS-SSSSSS--S------------------------------------
-----S----------S--------S----------S------------SSS-S--------------------------
-----S------S------S------------------------------------------------------------
-----------------S------------S---------------S--------------------------S------
---------S-S--------------S------S------S----------S------S---------------------
---------S-----------------------------S----------S-------S-----S-S-------------
--------------S-------------SS--------------------------------------------------
--S----------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SS-----------------------S---------S----------------------
-------------SS--------------------------SSSSSSSSSSSSSS---------------SSSS------
---------------S-----------S---S------------S---------------------------------S-
-----------------------------------S----------S-----------------------S---S----S
------------SS--S---S-SS------------S------S---S-----S--------------------S-----
----------S------SS--------------S-------S-S----S-----------S-------------------
S-------S-------S---------------------------------------------------------------
S--S-----------S------------S---S-----------------------------------S-SS-SSSSS--
----------------S---S---------S------S------------------------------------------
---------------------------------------------------S--------------------------S-
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------S--------------------------------
---------SSSSS------------------------------------------------------------------
---------------S--------S------------S------S-------S---S-----------------------
-------------------SS-S-S----------------------S--S--------------------SS---S---
---S----S--S---S---S--------------------------------------------S---S-SSS-------
----------S------------------------------------------S------------------S----SS-
-SS--S----------SS---S---S---------------------S--S---SS-------S----------------
S-S-----------------------------------S----S----------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-S---S----S-----------------------------------
---------S----------------------------------------------------SS----------------
-------------------S------------------------------------------------------------
------------------S-------------------------------S----------------------------S
------------------------S----S--S---------------------------------------------S-
--S----S---------SSSSSSSSSSSSSSSSSSSSS-------------------------------------
>forward_760
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AGAAACACCGTCACACGTGT----------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>reverse_4354
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---------------------------------AGTTTGCCGTGGATGGTCAT---------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>forward_3160
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------TTGATTGCAAGTATGGCGCG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>reverse_4481
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
CCCGTATTGGCAGGGAAGTA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>forward_3217
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-----------------------------------------------------------------------------ATG
CCGTTGAAGCGTTTGAG---------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_5225
--------------------------------------------------------------------------------
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------------------------TTTCTGCCCATGCGACCTT-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------
