>input_sequence_38999
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----------------------------------------------------------------------------ATGG
GGATCTCCGTCGCCGTCCCCTCCCTCCTCCTCCTCC------TCTCCGTCGCCCTCCTCCTGCCGCCGGCCGCCGCGCGA
TTCTCCTTCACCTACAACTTCACCGCCACCTCGGACTCGGCCCCATCGGGCATCTCCTTCCAGGGCGACGCCTTCTTCAA
CAAGTTCATCCGCCTCACCCGCGACGAGCGCGTCGGGCCCCTCACCAGCAGCGCCGGCCGGGCCTTCTTCTCCCGCCCCA
TCCCACTCTTCGACCCCGTCTCCCGCCGCCCCGCCTCCTTCGCCTCCGCCTTCTCCTTCTCCATCTCCGCCCCCGAACCC
TCGGCCGCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCGTTCCCCTCCGTCATCCCCAACAGATCCGCTGGCGGCCT
TCTCGGGCTCTTCAACTCCTCCGCCCGCAACGGGGGCCGCTCCCTCGTCGCCGTCGAATTTGACACCTACAGGAACGATT
GGGACCCCAGCGACGACCACGTCGGCATCGACCTCGGGGGCATCGCCTCCGTGGCCACCGCCGACTGGCCAACCAGCATG
AAGGACGGCCGCACGGCGCACGCGCGCGTCGCGTACGACGCGGAGGCCAAGAACCTCACCGTGGCCCTCTCCTACGGCGA
CTTTGTCCCCACGGACGTCCTTCTGTGGTACGCCGTCGATTTGAGGGAGCACCTGCCCGACGCCGTGGCCGTTGGCTTCT
CCGCCGCCACCGGCGAGGCCGCCGAGCTGCACAAGGTCCTGTACTGGGATTTCACCTCCAGCGTCGACAGCAAGGAGCAG
ACGGTGGTGCTGTGGGTGGTACTGGGATTGTGCGGATTCCTTGTTGTGCTGGTCGGTGCAGGGATTGTTTGGTTCGTGAA
GGAATGGAGGAAGACAGGAGAGTGTGTCCCCTACGTCGATATCGACGACGCAATGGGGTACGACGAGCTAACTGACGAGT
TCATCGTGCAGAGCGGGCCAAGACGGTTCCGTTATGCTGAATTGGTGGCGGCAACCAATAATTTCTCCGAGCAGAGGAAG
CTCGGGCAGGGCGGGTTCGGTGCTGTTTACCGGGGATTCTTGAAGGAGCTTGGTCAGGAGGTGGCCATCAAGAGGGTCTC
CAAGGGGTCGACCCAGGGCCGCAAGGAGTATGCAGCCGAGGTACGCATCATCAGCCAGCTGCGCCACCGGCATTTGGTCC
GGCTTGTCGGGTGGTGCCATGAACACCGTGGTGACTTCTTGCTCGTCTATGAGCTCATGCCCAATGGCAGCGTCGACCAG
CACCTCTACGGCAAGGGCGTGCACCTCACCTGGCCGACACGGTATGACATTGCACTGGGCCTCGCGTCGGCATTGCTCTA
CCTCCACGAGGAGTGCCTTCAGTGCATCGTGCACCGCGACATCAAGCCGAGCAATGTGATGCTGGATGCCACCTTCAGTG
CCAAGCTCGGCGACTTTGGCCTTGCCAAGCTCGTTGAGCATGGCAGCCAGCCCTACACCACCGTCCTGGCTGGCACGCTG
GGCTACTTGGCGCCAGAGTGCCTGACGACAGGCAAGTCAAGCCGAGAGTCGGACGTGTACAGCTTCGGCGTCGTGGCACT
GGAAATTGCTTGTGGACGACAGCCATCGGAGCCCACGGCGGAGCCGAGCAAGGCGAGGCTGGTGCCGTGGGTCTGGGAGC
TTTATGGGAAGAAAGCCCTTCTCGAAGCGGCGGACTGGAGGTTGAAGGTGGAGTTCGATGAGAAGCAGATGGAGCATCTG
ATGGTGGTTGGACTATGGTGCGCTCATCCTGACTACACGCATAGGCCAAGCATCAGGCAGGCCCTGAATGCCCTGAAATT
TGAGGCGGCATTGCCTGTGCTGGCGCCGAAGATGCCGGTGCCGACGTTCTTCCCTTTGCCTGACTTGGCTGCTCTGGTAT
CATCAGTTGGAGGTGCGTCCGACACGCAGAACCCAGGCGGCGTTACTGAGTGTGAGTCATCAGGGGCTAATGCTGGCAAA
GGATCTTCGGTGAGGGATAGACTTCTGGAGCCGTGA--------------------------------------------
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--------------------------------
>chr3D_1_TraesCS3D01G313500
AGTGGAGGTGCAGGCGATCGCAGGCAGCACCGGTCGCGCCGCCATCGCGGTTCGTGCCACACCGCCGTGACCACGAGGCC
GGCGTCCACGTCTGGCATGGTCGACAGGGCGCACTCCGGCGAGGAAGAGCAGCACACGGGACGCCC--------------
--------GCCACGGCTATTCTTCCCCTCCCGTTGATGCACCGTCGGCGAGCTTGCCACACATAGAGAAGACGAGATGTG
TGACACGGACTCCGCCACGATTGGCGATTATTTAGATTAGGTTAAAAGACTATCCCCTGCTTTTGTTTATTTGACATGTA
TGAAAAACGTAATGAGTTTGATCTGTTTAAATGAAATCATCTAATTAAACCCATTAAGCTATGCCACGTGGCGCAAGCTG
GTTGGCCGCGGTGAAAAAGCTTTTAGAATATTATTTTTAGATGAAGGTGAGGAATTTTTTAAAATGTTTTTTTTACATGG
AGGTGATGATCCCATATATTTTTTTAAATAGACGGCTACGCAAAGTGGTGCTTGCTGGTAGGCCGTGTTTGTGATTTTTT
TTTCTTTTTTACCTCTTTTTCTAGATGGAGATGAGGATTTTTTAAAATATTTTTTTAGATGAAGGTGATGACTACATGTA
TTTTTTAAATGAAAACGTGTACACAACTTCCTCTCAAGCGGCGCCACCAGGTGGCGCCCCAAATGCATGAAATTTGGTCA
TTTTATTCAAATTCCTTTGAAATGTATGGACACGGTTGGATAAGCCGGTTTTCGCATCAGCGTCCGTGAACTGGTCTGGA
CCAATATGCAGATAAATACATGG-CCGCGTTGGAGAGACGGTGACTCTTATCTTCCATTTCGCCAATGAACCATACGT--
-ATAATACAAGCCACTAATCCCAGCTCGTATTTTTTACTGGTCTCA----------AGTAGGATTTTATGTAATCCAGCT
CATGCCTTGTTCATTCTAGTCAACCTCGGCCCCACCCTGTCCTCCACCAAGGGCCAAGGCTCACCCAACCCACTCCATGG
GGATCTCCGTCGCCGTCCCCTCCCTCCTCCTCCTCC------TCTCCGTCGCCCTCCTCCTGCCGCCGGCCGCCGCGCGA
TTCTCCTTCACCTACAACTTCACCGCCACCTCGGACTCGGCCCCATCGGGCATCTCCTTCCAGGGCGACGCCTTCTTCAA
CAAGTTCATCCGCCTCACCCGCGACGAGCGCGTCGGGCCCCTCACCAGCAGCGCCGGCCGGGCCTTCTTCTCCCGCCCCA
TCCCACTCTTCGACCCCGTCTCCCGCCGCCCCGCCTCCTTCGCCTCCGCCTTCTCCTTCTCCATCTCCGCCCCCGAACCC
TCGGCCGCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCGTTCCCCTCCGTCATCCCCAACAGATCCGCTGGCGGCCT
TCTCGGGCTCTTCAACTCCTCCGCCCGCAACGGGGGCCGCTCCCTCGTCGCCGTCGAATTTGACACCTACAGGAACGATT
GGGACCCCAGCGACGACCACGTCGGCATCGACCTCGGGGGCATCGCCTCCGTGGCCACCGCCGACTGGCCAACCAGCATG
AAGGACGGCCGCACGGCGCACGCGCGCGTCGCGTACGACGCGGAGGCCAAGAACCTCACCGTGGCCCTCTCCTACGGCGA
CTTTGTCCCCACGGACGTCCTTCTGTGGTACGCCGTCGATTTGAGGGAGCACCTGCCCGACGCCGTGGCCGTTGGCTTCT
CCGCCGCCACCGGCGAGGCCGCCGAGCTGCACAAGGTCCTGTACTGGGATTTCACCTCCAGCGTCGACAGCAAGGAGCAG
ACGGTGGTGCTGTGGGTGGTACTGGGATTGTGCGGATTCCTTGTTGTGCTGGTCGGTGCAGGGATTGTTTGGTTCGTGAA
GGAATGGAGGAAGACAGGAGAGTGTGTCCCCTACGTCGATATCGACGACGCAATGGGGTACGACGAGCTAACTGACGAGT
TCATCGTGCAGAGCGGGCCAAGACGGTTCCGTTATGCTGAATTGGTGGCGGCAACCAATAATTTCTCCGAGCAGAGGAAG
CTCGGGCAGGGCGGGTTCGGTGCTGTTTACCGGGGATTCTTGAAGGAGCTTGGTCAGGAGGTGGCCATCAAGAGGGTCTC
CAAGGGGTCGACCCAGGGCCGCAAGGAGTATGCAGCCGAGGTACGCATCATCAGCCAGCTGCGCCACCGGCATTTGGTCC
GGCTTGTCGGGTGGTGCCATGAACACCGTGGTGACTTCTTGCTCGTCTATGAGCTCATGCCCAATGGCAGCGTCGACCAG
CACCTCTACGGCAAGGGCGTGCACCTCACCTGGCCGACACGGTATGACATTGCACTGGGCCTCGCGTCGGCATTGCTCTA
CCTCCACGAGGAGTGCCTTCAGTGCATCGTGCACCGCGACATCAAGCCGAGCAATGTGATGCTGGATGCCACCTTCAGTG
CCAAGCTCGGCGACTTTGGCCTTGCCAAGCTCGTTGAGCATGGCAGCCAGCCCTACACCACCGTCCTGGCTGGCACGCTG
GGCTACTTGGCGCCAGAGTGCCTGACGACAGGCAAGTCAAGCCGAGAGTCGGACGTGTACAGCTTCGGCGTCGTGGCACT
GGAAATTGCTTGTGGACGACAGCCATCGGAGCCCACGGCGGAGCCGAGCAAGGCGAGGCTGGTGCCGTGGGTCTGGGAGC
TTTATGGGAAGAAAGCCCTTCTCGAAGCGGCGGACTGGAGGTTGAAGGTGGAGTTCGATGAGAAGCAGATGGAGCATCTG
ATGGTGGTTGGACTATGGTGCGCTCATCCTGACTACACGCATAGGCCAAGCATCAGGCAGGCCCTGAATGCCCTGAAATT
TGAGGCGGCATTGCCTGTGCTGGCGCCGAAGATGCCGGTGCCGACGTTCTTCCCTTTGCCTGACTTGGCTGCTCTGGTAT
CATCAGTTGGAGGTGCGTCCGACACGCAGAACCCAGGCGGCGTTACTGAGTGTGAGTCATCAGGGGCTAATGCTGGCAAA
GGATCTTCGGTGAGGGATAGACTTCTGGAGCCGTGAAAGTGGTGGGTTTTGTGAAGCTGCTTTCACGATGATTTTGTTTG
TTTCGTCTTGTGCTGCAACATGGAGGTGTGATTGATTGTACAATTATATTTGTATGAGTTGAGTTTGGTTTGTATAGCAG
GGAAATGTGTTGGATTATATCGGTCAAAAGGACCGAACAAGAAGAAATATCCCAAGGCAGTTTGGGGTATTAGGGTGAG-
--TCAGGTGTTAAAGCTGATAGATTGCTTATAACTTGAATGTCACTCGTGTGAGATGATA-GCCGATACGAGCAAACCAG
ATGTC----------------AGAAGGCCAGACGCAATGGCAAAC---CAACGGGACTAGAACACCGCTCAAACCTTTTA
TC----ATATACAACCACACTGA----ACAGATGCATGTAAGCCGC-AAGTAGATTAGAATGTGCTGA-GAAAACTTGTA
CAAATATAAGTTAGCTAACGATACTTTGCTTTGTTATATCTTCATAATAGTCAAACGACACCATTGCAGCCAATTGAAAG
TTAACCTGAGGGTCCC-TCCCTACTTGCAGTGCCAAAAGAATTGGATGGTCTAACAACCACAATGACACCTTCCAACTAC
AAAATCTCAACACCTGTACAAACTAAAAGCACTAGGCCCCTATAGAAATGCTATTTGATACCTCCCCTGAGAAATATTTA
TCTATCACTGCCCCTATTACACCATTCCATGAGCAAAATTGTGTTCCATCTCAGGAGGTGATGCTAAACCATAAACAAAT
AATTCAAGTCGTCCACTGTCAGTCGAGTCTGACCGCCACCAGATTTATCTTCCCCAAAAGCTGAAGCAACCATCTCCCGC
TTTTTCTCCTGAGACAAATTATACATCTCATCTTAGTACTGCATGAAACTGTG--CATCTAAAAATTCATTGCCAAACAG
AATACATCGATAAATAGTACCCTCTCGTCGAGGACCAATGGGAAGGATTGACATCACATAGGATTTAACCGAGTGAGCAG
TAGGAACTCAAAGCAAGAAATTAATTATTTTG
>chr3A_4
---GGAGGTCCAGGCAACCGCAGACAGCGTCGGTCGCGTCGCCATCGTGGTTTGTGCCACACGGCCACGACCACGAGATC
GGCATC-------------GTCGACAGGGCGCACTCCGGCGAGGAAAAGTAGCACACGGGACGCCGCCATGGCTTGGGTA
CCGAGAAGGCCACTCCTATTCTTCCCCTCCTGTTGATGCACCGCCGGCGAGCTTGCCAGACGTAAAGAAGACGAGATGTG
TGACACGGACTCCGCCACGATTGGCGATCATTTAGATTAGGTTAAAAGAATATCGCCCGCTTTTGTTTATTTGCAATGTA
TGAAAAACGCAATGAATTTGATCTGTTTGAATGAAATCATCTAATCTGCAAAATTTGGC---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------CA
TTTTGTTCAAATTTCTTTGAAATGTATGGACACGGTTGGAT-AGCCAGTTTTCACATCAATGTCCATGAACTGGTCCTGA
CCAATACGCAGATAAATACATGG-CCGCGTTGGAGAGATGGTG--------------------------ACCATACGT--
-ATAATACAAGCCACTAATCCCAGCTCGTATTTTTTACTGG-------TCTCAAGCAGTAGGATTTTATGCAATCCAGCT
CATGCCTTGTTCATTCTAGTCAACCTCGGCCCCACCCTGTCCTCCACCAAGGGCCAAGGCTCACCCTACCCACTCTATGG
GGATCTCCGTCGCCGTCCCCTCCCTCCTCCTCCTCCTCCTCCTCTCCGTCGCCCTCCTCCTGCCGCCGGCCGCCGCGCGA
TTCTCCTTCACCTACAACTTCACCGCCGCCTCGGACTCGGCCCCATCGGGCATCTCCTTCCAGGGCGACGCCTTCTTCAA
CAAGTTCATCCGCCTCACCCGCGACGAGCGCGTCGGGCCCCTCACCAGCAGCGCCGGCCGGGCCTTCTTCTCCCGCCCCA
TCCCACTCCTCGACCCCGTCTCCCGCCGCCCCGCCTCGTTCGCCTCCGCCTTCTCCTTCTCCATCTCCGCCCCCGAACCC
TCCGCCGCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCGTTCCCCTCAGTCATCCCCAACAGATCCGCTGGCGGCCT
TCTCGGGCTCTTCAACTCCTCCGCCCGCAACGGGGGCCGCTCCCTCGTCGCCGTCGAATTCGACACCTACAGGAACGATT
GGGACCCCAGCGACGACCACGTCGGCATCGACCTCGGGGGCATCGCCTCCGTGGCCACCGCCGACTGGCCAACCAGCATG
AAGGACGGCCGCACGGCGCACGCGCGCGTCGCGTACGACGCGGAGGCCAAGAACCTCACCGTGGCCCTCTCCTACGGCGA
CGCTCCCCCCACGGACGTCCTTCTGTGGTACGCCGTCGATTTGAGGGAGCACCTGCCCGACGCCGTGGCCGTTGGCTTCT
CCGCCGCCACCGGCGAGGCCGCCGAGCTGCACAAGGTCCTGTACTGGGATTTCACCTCCAGCGTCGACAGCAAGGAGCAG
ACGGTGGTGCTGTGGGTGGTACTGGGATTGTGTGGATTCCTTGTTGTGCTCGTCGGTGCAGGGATTGTTTGGTTCGTGAA
GGAATGGAGGAAGACAGGAGAGTGTGTCCCCTACGTCGATATCGACGATGCAATGGGGTACGACGAGCTGACTGACGAGT
TCATCGTGCAGAGCGGGCCAAGAAGGTTCCGTTATGCTGAATTGGCGGCGGCAACCAATAATTTCTCCGAGCAGAGGAAG
CTCGGGCAGGGCGGGTTCGGTGCTGTTTACCGGGGATTCTTGAAGGAGCTTGGTCAGGAGGTGGCCATCAAGAGGGTCTC
CAAGGGGTCGACCCAGGGCCGCAAGGAGTACGCGGCCGAGGTACGCATCATCAGCCAGCTGCGCCACCGGCATTTGGTCC
GGCTTGTCGGGTGGTGCCATGAACACCGTGGCGACTTCTTGCTCGTCTATGAGCTCATGCCCAATGGCAGCGTCGACCAG
CACCTCTACGGCAAGGGCGTGCACCTCACCTGGCCGACACGGTACGACATTGCACTGGGCCTTGCCTCGGCATTGCTCTA
CCTTCACGAGGAATGCCTTCAGTGCATTGTGCACCGCGACATCAAGCCGAGCAATGTGATGCTGGATGCGACCTTCAGTG
CCAAGCTCGGCGACTTTGGCCTTGCCAAGCTCGTTGAGCATGGCAGCCAGCCCTACACCACCGTCCTGGCTGGCACGCTG
GGCTACTTGGCGCCAGAGTGCCTGACGACAGGCAAGTCAAGCCGAGAGTCGGACGTGTACAGCTTCGGCGTCGTGGCACT
GGAAATTGCTTGCGGACGACAGCCATCGGAGCCCACGGCGGAGCCGAGCAAGGCAAGGCTGGTGCCGTGGGTATGGGAGC
TGTATGGGGAAAAAGCCCTTCTCGAAGCGGCAGACTGGAGGTTGAAGGGGGAGTTCGATGAGAAGCAGATGGAGCATCTG
ATGGTGGTTGGACTATGGTGCGCTCATCCTGACTACACGCATAGGCCAAGCATCAGGCAGGCCCTGAATGCCCTGAAGTT
TGAGGCGCCATTGCCTGTGCTGGCACCGAAGATGCCGGTGCCGACGTTCTTCCCTTTGCCTGACTTGGCTGCTCTGGTGT
CATCAGTTGGAGGTGCGTCCAACACACAGGACCCAGGCGGCGTTACTGAGTGCGAGTCATCAGGGGCTAATGCTGGCAAA
GGGTCTTCGGTGAGGGATAGACTTCTGGAGCCGTGAATGTGGTGGATTTTGTGAAGCTGCTTTCACGATGATTTTGTGTG
TTTCGTCTTGTGCTGTAACATGGAGATGTGATTGATTGTACAATTATATCTGTATGAGTTGAGTTTGGTTTGTATAGCAT
GAAAATATGA---ATTATATCGGTCAAAAGGACCGAACAAGAAGAAATATCTTGAGGCAGTTTGAGGTATTAGGTTGAGT
CATCAGGTGATAAAGCTGCTAGATTGCTTATAACT------------GTGTGAGATGATA-GCCGATACGAGCCAACTAG
ATGTCGCCACAGTTTTTGTGTAGCAGGTCACACGCAACGTCAAACCAACAACGAGACTAGAACACCGCTCAAACTTTCAC
ATGGTTATATAAAACCGCACTGAACAGACAGACGCGTGTAAGCCAAAAAGTAGATTAGAATGTGCTGACGAAAACTTGTA
CAAATATAAGTTAACTAACAACATTTTGCTTTGTTATATCTTCATAATAGTCAAACGACACCATTGCAGCCAATTGAAAG
TTAACCTGAGGGTCGGGTCCCTACTTGCAGTGCCAAATTAATTGGATGGTCTAACAACCACAATGACATCTTTCAACTAC
AAAATCTCAACACCTGTACAAACTAAAAGCACTAGGCCCCTATAGAAATGCTATTTGTTACCTCCCCTGAGAAACATTTA
TCTATCACTGCCCCTATTACACCATTCCATGAGCAAAATTGTGTTCCATCTCAGGAGGTGATGCTAAACCATGAACAAAT
AATTCAAGTCATCCACTGTCAGTCGAGTCTGACCGCCACCAGATTTATCTTCCCCAAAAGCTGAGGCAACCATCTCCCGC
TTTTTCTCCTGAGACAAATTATACATCTTAGTACGC-ACTGCATGAAACAGTG--CATCTAAAAATTCATTGCCAAACAG
AATATATCGATAAATAGTACCCTCTCGTCGAGGACCAATGGGAAGGGTT-ACATCACATAGGATTTAACCGAGTGAGCAG
TTGGAACTCAAAGCAAGAAATTAAATATTT--
>chr3B_792
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-------------AAATACATGGCCCGCGTTGGGGAGACGGTGACTCT-ATCTTTGATTTCGCCAATGAACAATACGTAT
AATAATACAAACCACTAATGCCAGCTCGTATTTTTTACTGGTCTCAACTCTCAAGTAGTAGGATTTTATGTAATCCAGCT
CATGCCTTGTTCATTCTAGTCAACCTCGGCCCCACCCTGTCCTCCACCAAGGGCCAAGGCTCACCCAACCCACTCCATGG
GGATCTCCGTCGCCGTCCCCTCCCTCCTCCTCCTC---------TCCGTCGCCCTCCTCCTGCCGCCGGCCGCCGCGCGA
TTCTCCTTCACCTACAACTTCACCGCCGCCTCGGACTCGGCCCCATCGGGCATCTCCTTCCAGGGCGACGCCTTCTTCAA
CAAGTTCATCCGCCTCACCCGCGACGAGCGCGTCGGGCCCCTCACCAGCAGCGCCGGCCGGGCCTTCTTCTCCCGCCCCA
TCCCACTCTTCGACCCTGTCTCCCGCCGCCCCGCCTCCTTCGCCTCCGCCTTCTCCTTCTCCATCTCCGCCCCCGAACCC
TCCGCCGCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCGTTCCCCTCCGTCCTCCCCAACAGATCCGCTGGCGGCCT
TCTGGGGCTCTTCAACTCCTCCGCCCGCAACGGGGGCCGCTCCGTCGTCGCCGTCGAATTCGACACCTTCAGGAACGATT
GGGACCCCAGCGACGACCACGTCGGCATCGACCTCGGGGGCATCGCCTCCGTGGCCACCGCCGACTGGCCAACCAGCATG
AAGGACGGCCGCACGGCGCACGCGCACGTCGCGTACGACGCGGAGGCCAAGAACCTCACCGTGGCCCTCTCCTACGGCGA
CGCTCCCCCCACGGACGTCCTTCTGTGGTACGCCGTCGATTTGAGGGAGCACCTGCCCGACGCCGTGGCCGTTGGCTTCT
CCGCCGCCACCGGCGAGGCCGCCGAGCTGCACAAGGTCCTGTACTGGGATTTCACCTCCAGCGTCGACAGCAAGGAGCAG
ACGGTGGTGCTGTGGGTGGTACTAGGATTGTGCGGATTCCTTGTTGTGCTGGTCGGTGCAGGGATTGTTTGGTTCGTGAA
AGAATGGAGGAAGACCGGAGAGTGTGTCCCCTACGTCGATATCGACGATGCAATGGGGTACGACGAGCTAGCTGACGAGT
TCATCGTGCAGAGCGGGCCAAGACGGTTCCGTTATGCTGAACTGGTGGCAGCAACCAAAAATTTCTCCGAGCAGAGGAAG
CTCGGGCAGGGCGGGTTCGGTGCTGTTTACCGGGGATTCTTGAAGGAGCTCGGTCAGGAGGTGGCCATCAAGAGGGTCTC
CAAGGGGTCGACCCAGGGCCGCAAGGAGTACGCGGCCGAGGTACGCATCATCAGCCAGCTGCGCCACCGGCATTTGGTCC
GGCTTGTCGGGTGGTGCCATGAACACCGTGGTGACTTCTTGCTCGTCTATGAGCTCATGCCCAATGGCAGCGTCGACCAG
CACCTCTACGGCAAGGGCGTGCACCTCACCTGGCCGACACGGTATGACATTGCACTGGGCCTCGCGTCGGCCCTGCTCTA
CCTCCACGAGGAGTGCCTTCAGTGCATCGTGCACCGCGACATCAAGCCGAGCAATGTGATGCTGGATGCCACCTTCAGTG
CCAAGCTCGGCGACTTTGGCCTTGCCAAGCTCGTTGAGCATGGCAGCCAGCCCTACACCACCGTCCTGGCTGGCACGCTG
GGCTACTTGGCGCCAGAGTGCCTGACGACAGGCAAGTCAAGCCGAGAGTCGGACGTGTACAGCTTCGGCGTCGTGGCACT
GGAAATTGCTTGTGGACGGCAGCCATCGGAGCCCACGGCGGAGCCGAGCAAGGCGAGGCTGGTGCCGTGGGTCTGGGAGC
TTTATGGGAAGAATGCCCTTCTTGAAGCAGCGGACTGGAGGTTGAAGGGGGAGTTTGATGAGAAGCAGATGGAGCGTCTG
ATGGTGGTCGGGCTATGGTGCGCTCACCCCGACTACACGCATAGACCAAGCATCAGGCAGGCCCTGAATGCCCTGAAATT
TGAGGCGCCATTGCCTGTGCTGACACCGAAGATGCCGGTGCCGACGTTCTTCCCTTTGCCTGACTTGGCTGCTCTGGTAT
CATCTGTTGGAGGTGCGTCCAACACACAGAACCCAGGCG---TTACCGAGTGCGAGTCATCAGGGGCTAATGCTGGCAAA
GGGTCCTCGGTGAGGGACAGACTTCTGGAGCCGTGAATGTGGTGGATTTTGTGAAGCTGCTTTCACGATGATTTTTTTTT
ATTA---TTGTGCTGCAACATGGAGGTGTGATTGAATGTACAATTATATCTGTATGAGTTGAGTTTGGTTTGTATAGCAT
GAAAATGTGTTGGTTTATATCGGTCAAACGGACCGAACAAGAAGAAATATCTTGAGGCAGTTTGAGGTATTAGGTTGAGT
G---AGGTGATAAAGCTGCTAGATTGATTATAACT------------GTGTGAGATGATTTGCCGATACAAGCCAACTA-
--GTCACCACAGTTTTTGTGTAACAGGTCACACGCAACGTCAAACCAACAACGAGACTAGAACGCCGCTCAAACTTTCAC
ATGGTTATACACAACCGCACTGA----ACAGACGCATGTAAGCCAAAAAGTAGATTAGAATGTGCTGACGAAAACTTGTA
CAAATATAAGTTAACTAACGATA--TTGCTTTGTTATATATTCATAATAGTCAAACGACACCATTGCAGCCAATTGAAAG
TTAACCTGAGGGTCGGGTCCCTACTTGCAGTGCCAAAAGAATTGGATGGTCTAACAACCACAATGACACCTTCCAACTAC
AAAATCTCAACACCTGTACAAACTAAAAGCACTAGGCCCCTATAGAAATGCTATTTGTTACCTCCCCTGAGAAATATTTA
TCTATCACTGCCCCTATTACACCATTCCATGAGCAAAATTGCGTTCCATCTCAGGAGGTGATGCTAAACCATAAACAAAT
AATTCAAGTCGTCCACTGTCAGTCGAGTCTGACCGCCACCAGATTTATCTTCCCCAAAAGCAGAAGCAACCATCTCCCGC
TTTTTCTCCTGAGACAAATTATACACCTTAGCACGC-AATGCATGAAATAGTGCACATCTAAAAATTCATTGCCAAACAG
AACACATCGATAAATAGTACCCTCTCGTCGAGGACCAATGGGAAGGGTTGACATCACATAGGATTTAACCGAG----CAG
TAGGAACTCAAAGGTAGAAATTAATTATTT--
>SNPs
SSS------S-----S-S-----S----SS--------S--------S----S---------S---SS---------SS-
---S--SSSSSSSSSSSSS---------------------------S--S---------------S--------------
-------------SS---------------S------------S--------------S--S--S---------------
----------------------------S--------------------S----S--S---------------SS-----
---------S-----S------------S----------------SSSSSSS---SS--SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
----S--------S---------------------------S----S------S-----SS----S----------SS--
------S-----------------------------------------S-----SS------------------------
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---------------------------S----------------------------------------------------
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--S-----------------------------------------------------------------------------
------------------------------------------------------------S-------------------
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-SS-SS--------------------------------------------------------------------------
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------------------------------------------------S-------------------------------
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------------------------------S--S----------------------------------------------
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------------------------------------------------S-------------------------------
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-------S----------------S-------------------------------------------------------
--------------------S----S--------------------------S---------------------------
--S----------------------------------S-------S----------------------------------
-------------------------------------------------S-----------------------------S
-S-------------------------------------------------SSS----------S---------S-----
---------S--------S----------------SSSSSSSSSSSS--------------------------S---S--
-----------------------S---S--S------S-S-------------S--------------------S--SSS
SS--------------S---------------S-----------SS----------------------------------
-------------S---------S--------------------------------------------------------
--------------SS----------------------------------------------------------------
---------------------------------------------------------S----------------------
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----------------------------S-S-SSSSS------------S------------------------------
----------------------------------------------S---------------------------------
------------------------------SS
>forward_528
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----------------------------TAGACGGCTACGCAAAGTGG--------------------------------
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>reverse_2194
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---------------------------------AGCCGAGGTACGCATCATC----------------------------
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>forward_1685
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-----------------------------------------------------------------CCTCTCCTACGGCGA
CTTTG---------------------------------------------------------------------------
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>reverse_3398
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-------------------------------------TGGCAAACCAACGGGACTAG-----------------------
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