>input_sequence_38958
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------------------------------------------------------------ATGTCGTCGGCGTCCCTCGC
CGCCAGGCTCCTCCGCCGCGCCGCCTCTTCGTCGCGGGCCTCCACCCTATCCCGACGCTGCGCCCACTCCTCCGCGACGT
CCCGCGCGCCCGTTTCGCTTGCCCGTTTCCACCCCGCC------------G------------CCGCCTCCCCTTCAGGG
ACCACTGCCCGCCGCTTCCTGTCGTCGCAGTCCCCGGCGTCTTCCTCCAAGATCTCCCCGGACGAGAACCTGAGGCGGGT
CATCGACTCCGAGATCGAGTGCGTCGTCGAATCGGAGGAGGGCTCCGCGCAGGTATCTTGGCTTCCTTAACCACCGCCCG
TGCATTTCCTTTTGGTTGCTTCGAGATAGTAGTATGACTCCATTTATCCACGATCGGGCTTTATTATTTGTGGTGTGAAT
ACCGGAG--------------------------------TAAATGCCTTGATACCGCGTATTTGGGAAATATTAGGAACA
TAACCAAAATTAAGGTTGTCGATGCAAGACTGTTTAG-------------------------------------------
-------------------------TCTTTTATGTGGTAAAGT--AGTAGTACTAGCTATGCCCGTGATTGTTGCTCCTG
CAGTGAACAGCT-ACTCTGGGAATCTCTCATCCCCGCATCTCAAA-----------------------------------
---TTAGTCAGTAATGGTGACTAT---TCAGGATTAAAGAATTAAAATGGTAGTGGTATGGATAGTAAAAAGGAAATATT
GTTGGTATATTACAAAACCT-GGTTGC-GAGATCCTGGCCGGTGCTGGATGCTCCAGGCTCCAGCTCAATCCAATAGGTT
CACAAACTTGACTTTGATAGCTCAACTTTTCAGATGTTCAAGTCATTCCCCTTCTAAACTACTCCCTCTGTCCCATAATG
TAAGACGTTTTTTGACAC-----------AAACGTCTTACATTATGGG--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACGGAGGGAGTATT
TATGAGTCAATTGGACATTATTAGATGAAGTTTGTGCACATTTGAAATGTTTATTCAGGTAAGTGAACGTTTGAAATGTA
CCTTGCGTAGTATTAATTGCTCTCTGAGGTCCATAA-------------ACTCCAGT-ATATG---GTATATGTCAATGT
GATAAAGTGTTAT-------------------------ACTGCGATGATGTAAAG-------------------------
------------------------------------------------ATGGGTTTCATAGACTGATGTCGCGTACTATA
CCTTGTGTTATACTTATGCTTTG-------------------------------------CAAGTACTTGATTGTTTCAT
CTTGTTAATAGGAAGAAATGCTTTAGTTTTGCTTCAAAAGAACCTTTGTCTGT------AAAACACTACTCTGATATTTT
TGAAAAAGGACATGACCAAAATATTTGTTTTGAATTGT--TTTTAACAGCAAATTGATCCACCAGAAGACTTCCCCTTTG
AGATAATTGATAACCCTGGTGATCAGTCCATCGTTCTCAAAAGAGAGCTTGCAGGAGAGACTATTAAAGCTACTGTCTAC
ACAAATTTTGATACTGAGGAAGATTTGAACAATGAGGACTCTGGTGCTGAGAATGATGATGACTCATTTAAGCCAGCACT
TCAGATGGTTGTCACTGTTGAGAAACCAGGAGGCTCAATCCTGGAATTTGAGTGCAACTTTAATGATGATGAACTGGCAA
TTGAAAATATGAGGTTGCTGAATCGCGATGCCAAGTTTACTGAGAATGCATATGAGGGGCCACAATTCTCGTAAGTTCAA
TTTTTCTTATCTAACTTATATTATTTCTTCAATTTCAAGCATCAAAATAAGCCAACCAAATGGTTGCTGAATCATAATAA
AACAAAATGGTA-------------TACTTTCAAGGATCCCTGGTCACAAATTTC---TTGTTGTTTTCCACGAAATGGC
TCAAGCATGACATTACTTTCTTGTATGTGTTTCTCCCCTGGCTGATTATTCACCCTAATGTTCTGTTTGCTCAAGTACTT
AGATGACTACTA--------------------------------------------------------------------
-----------------------------------------------------------GTAAACTGCATTGCATCTTAT
GGTTTC-TTCTGACGTTTACTTGCTCATTGTTTTCTACAGTGATCTGGACGAGAGCTTGCAGAAGTCCTTTCACAGGTAT
CTTGAGGTGAGGGGGATCAAGCACTCGCTGCATGACTGGCTGCACGAGTACATGATGAGCAAGGATGAGAAGGAGTACGT
GGTTTGGTTGAAGAACATGAGAGAGTTCATCGAGAAATGA----------------------------------------
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>chr7D_1_TraesCS7D01G228600
CCACTCTTCTTCTTGATATCCTCGACAACAACCTTGCAATTAGATGCAACATAAATGCCCGTTTCATAGAGATCGTCCGC
CAGTGTCAATCCCTCTAAGACTGCTAGAGCT----GAGTTGTGGAGTCTGAAATCCCAACAAATGTGATCGTCGAGGCCC
CCATATAGTTCCCGAGGCTATCCCTACACACAATAGCAACAACACAACACCTGCTTGCATGTTCCGAGTAAGAGCAGCTT
CCACGTTGTTTTACACATCCCCCTC-GGTGGTGCAATCAAACGAGTTGGCATGGCCGGTGCAACCCTTCTAGTTCCATCA
GTAGGTTTCTCCAGAGCCTTCAAATCAGGTATAAAAGAGTTTATGAAAGCTCTAATGGCGTGCGGCGTTTGATATATGTC
GTCATGTATGACCTTCCGCCTCGAGCTCCAAATTGCCCAAAGAATAACTCCTAGACGAGTAAACTCTGCATGCAATAATG
CGGCCTACATTTTGAACAACCAACTCTTGGCACTTAGATCATCATGGAGACTCACTTGTTCCACCAATGTTTTAGAGGAG
AGAGCCCATATGCATCGCGACATTGTGCACTCTAGGAGCACGTGCCTCCAGGAATCTACCACACCGCACAACAAGCATGC
CGCAAATGTTGCAATATGACGATGGTGAAGAAGCTCGCACGTCAGGATGGATTCTCGGGCAGACGCCACATAAACATGCG
GATTTTATTTGGAACCTGCGTACTCCACTCCATTTTTTATTCTTTTTGAGGGGCTCTGCGTACTCGACTCTATGTGCCCA
CCAAAAGAAAAAGACAATGAAGACTGAGCTCTATGGGCCGGAGGGTCATTCTCAAGTGCACTGGGTTGGGCCACC-----
----------GCTCCATTATTTCTTACCTTTTCCCCAAGTCTTCTCCATTCGGCCTCCAGCCCTTTAAACCCCACAAAAC
CCTAGACTTCGCAGCGAGCAGCCGTCGTCCGATCCCCACAGAAACACCAAAGCCCGAGCCATGTCGTCGGCGTCCCTCGC
CGCCAGGCTCCTCCGCCGCGCCGCCTCTTCGTCGCGGGCCTCCACCCTATCCCGACGCTGCGCCCACTCCTCCGCGACGT
CCCGCGCGCCCGTTTCGCTTGCCCGTTTCCACCCCGCC------------G------------CCGCCTCCCCTTCAGGG
ACCACTGCCCGCCGCTTCCTGTCGTCGCAGTCCCCGGCGTCTTCCTCCAAGATCTCCCCGGACGAGAACCTGAGGCGGGT
CATCGACTCCGAGATCGAGTGCGTCGTCGAATCGGAGGAGGGCTCCGCGCAGGTATCTTGGCTTCCTTAACCACCGCCCG
TGCATTTCCTTTTGGTTGCTTCGAGATAGTAGTATGACTCCATTTATCCACGATCGGGCTTTATTATTTGTGGTGTGAAT
ACCGGAG--------------------------------TAAATGCCTTGATACCGCGTATTTGGGAAATATTAGGAACA
TAACCAAAATTAAGGTTGTCGATGCAAGACTGTTTAG-------------------------------------------
-------------------------TCTTTTATGTGGTAAAGT--AGTAGTACTAGCTATGCCCGTGATTGTTGCTCCTG
CAGTGAACAGCT-ACTCTGGGAATCTCTCATCCCCGCATCTCAAA-----------------------------------
---TTAGTCAGTAATGGTGACTAT---TCAGGATTAAAGAATTAAAATGGTAGTGGTATGGATAGTAAAAAGGAAATATT
GTTGGTATATTACAAAACCT-GGTTGC-GAGATCCTGGCCGGTGCTGGATGCTCCAGGCTCCAGCTCAATCCAATAGGTT
CACAAACTTGACTTTGATAGCTCAACTTTTCAGATGTTCAAGTCATTCCCCTTCTAAACTACTCCCTCTGTCCCATAATG
TAAGACGTTTTTTGACAC-----------AAACGTCTTACATTATGGG--------------------------------
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------------------------------------------------------------------ACGGAGGGAGTATT
TATGAGTCAATTGGACATTATTAGATGAAGTTTGTGCACATTTGAAATGTTTATTCAGGTAAGTGAACGTTTGAAATGTA
CCTTGCGTAGTATTAATTGCTCTCTGAGGTCCATAA-------------ACTCCAGT-ATATG---GTATATGTCAATGT
GATAAAGTGTTAT-------------------------ACTGCGATGATGTAAAG-------------------------
------------------------------------------------ATGGGTTTCATAGACTGATGTCGCGTACTATA
CCTTGTGTTATACTTATGCTTTG-------------------------------------CAAGTACTTGATTGTTTCAT
CTTGTTAATAGGAAGAAATGCTTTAGTTTTGCTTCAAAAGAACCTTTGTCTGT------AAAACACTACTCTGATATTTT
TGAAAAAGGACATGACCAAAATATTTGTTTTGAATTGT--TTTTAACAGCAAATTGATCCACCAGAAGACTTCCCCTTTG
AGATAATTGATAACCCTGGTGATCAGTCCATCGTTCTCAAAAGAGAGCTTGCAGGAGAGACTATTAAAGCTACTGTCTAC
ACAAATTTTGATACTGAGGAAGATTTGAACAATGAGGACTCTGGTGCTGAGAATGATGATGACTCATTTAAGCCAGCACT
TCAGATGGTTGTCACTGTTGAGAAACCAGGAGGCTCAATCCTGGAATTTGAGTGCAACTTTAATGATGATGAACTGGCAA
TTGAAAATATGAGGTTGCTGAATCGCGATGCCAAGTTTACTGAGAATGCATATGAGGGGCCACAATTCTCGTAAGTTCAA
TTTTTCTTATCTAACTTATATTATTTCTTCAATTTCAAGCATCAAAATAAGCCAACCAAATGGTTGCTGAATCATAATAA
AACAAAATGGTA-------------TACTTTCAAGGATCCCTGGTCACAAATTTC---TTGTTGTTTTCCACGAAATGGC
TCAAGCATGACATTACTTTCTTGTATGTGTTTCTCCCCTGGCTGATTATTCACCCTAATGTTCTGTTTGCTCAAGTACTT
AGATGACTACTA--------------------------------------------------------------------
-----------------------------------------------------------GTAAACTGCATTGCATCTTAT
GGTTTC-TTCTGACGTTTACTTGCTCATTGTTTTCTACAGTGATCTGGACGAGAGCTTGCAGAAGTCCTTTCACAGGTAT
CTTGAGGTGAGGGGGATCAAGCACTCGCTGCATGACTGGCTGCACGAGTACATGATGAGCAAGGATGAGAAGGAGTACGT
GGTTTGGTTGAAGAACATGAGAGAGTTCATCGAGAAATGAGTGCCACTGCCCGTCATTCTCTTTTAATAGAAAGAACATG
CCTGGTGCTCTATGTCAAACCTGTCTGATCATAATTGTGCCTTGCTTTCTGGCACACCAAGTCTCGGTGGACGCTGAGCT
GGATTTATATTTTGCTGGACCTGTTTAGCTGTAGAAAAGTTTCGGCATCTTATCTTTCGATGTTTAACCTGTGATCCGTT
CAGATATGATCAGTTCATGTATTTTCAGCCGTGAGTATATTGCTACG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACGTTCTAGAACCATGAGGGGATGATTT-
GAGATATAATTGTCTGTGGACATGAGTTGAATAGTT--------------------TAACCTGCAAGCCATTTAGATTCA
AGCTTATACAAGTTTGTATCCCAAGAAAGGAAGAGGCTGACGTGATGGAACTCCTGAAGCAGCCAAATGGTCTATGCTTG
GCTGCTACTTCTTTGACCTCGTG--GTACCTAATTGTTCAAGCCGTACGCGTGAGATGA---TGACCGGAGAACCAGCAA
ACTTAAAAATCAGAATTAGCTGTGCAGCAAAGGAAAACAATTCCTTGAAGTTTTTCTCTGCTTCAACTGTGTCAGCTGAC
AGTTCTGAGTGTCATCTCCGCCTGATGCGATAGTGTGTTACGTCAAATTTCTTTGTTGATGCTATCAAGGCTGAGATGTA
GAGTTTGCAACTTACAGCATCTCCAACAAACACCCAAAAACTGTGATCGTGACAAAAAAATAACTGCGGCCGTGCCCGAA
AGATTGTCTTTTAGGGCATTTTGACCCAAAAAATGCAGCTTCAGCAGCTGCCTTATCTCCTACCAACGCTAGTGGCTGCT
GCAAAACCAAAACGCAGCCCCGTGAACCCTCAACTTCACAGGTAATCATTCCCCGCCTATATCCGCCGCCGCAGCCTTTG
ATTCCAACCACCCTATGCTGTTGGATGCCACAAGCCATCTTGACACCCTGCCGCCCGTTTCCACCCTCGAGCCACATCCT
GATGTCGCCCCTACCACAGTTGTCGCCCA
>chr4B_1
CCACTTTTTTGCTTGATATCATCAACCACGGTCTTGCAATCTGATGCAACAAAAACTTTGCGTTCGTATAGATCATTCGC
TAGGGATTAACCTTCACGCACAACTAAAGCTTCCAGAGTTGTAGGGTTTGCTATTCCCACAAAAGTGATCGTCGAGGCCC
CCAAGTAGTTTCCCAGCCTGTCCCCGCATACAGCAGCCACTACCCCTAT-----TTTCATATTCTGAAAAAGAGCGGCAT
CCACATTGATTTTGCTAGTTCCGTCTGGAGGTGCAATCCATCTGTTTGGCCTAGTCTGGGGAACTCAAGAGGATGCAGCA
GCGGGCTTCTCCAGCGCCTTCAGATCATCTATAAAAGAATTTACAAAAGCATTAGTGGCATGAGGCGTCTGGTAGATGCC
CTCGTGTATAACCTTACATCT-----------------------------------------------------------
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------------------------TGAGCTCCATATTACCCATAGGGTGACTCCCAT-ACGTG---TGAAGTCTTCATGT
GATAACGAGGTTTGCATGTTAAATAACCAACTCTTGGCACTTAGATCATCATGAAGACTCAGTTGTTCAACCAGCATCTC
AGAGGAAAGGACCCAAATGCAGCGAGACATGGTGCACTCGAGTAGTGCATGCCTCCAAGAATCTGCCATGCCACACATCA
AGCATGCCGGTGATGTTGCTATATTGCGTTTGTGAAGGAGCTCACCCATCGGGATAGACTCAAGAACCAAACGCC-----
--------------------------------------------------------------------------------
---------ACATGAACAAATGAATTTTTTTTGGGACCTGGGTGCTCCA-------------------------------
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>chr7B_811
AATAGAGGA-----------------------------------------------------------------------
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------------------------TGAGCTCTATGGGCCGGAAGGACATTCTCAAGTACACTGGGTTGGGCCGCTGAGCT
TCT---------------ACTTCTTACCTTTTCTCCAAGTCTTCTCCATTCGGCCTCCAGCCCTTTAAACCCCACAAAAC
CCTAGACTTCGCAGCGAGCAGCCGTCGTCGGATCCCCAGAGAAACACCAAAGCCCGAGCCATGTCGTCGGCGTCCCTCGC
CGCCAGGCTCCTCCGCCGCGCCGCCTCTTCGCCGCGGCTCTCCACCCTATCCCGACGCTGCGCCCACTCCTCCGCGATGT
CCCGCGCGCCCGTTTCGCTTGCCCGTTTCCACCCCGCCGCCGCCGCCGCCG------------CCGCCTCCCCTTCAGGA
ACCACTGCCCGCCGCTTCCTCTCGTCGCAGTCCCCGGCGTCTTCCTCCAAGATCTCCCCGGACGAGAACCTGAGGCGGGT
CATCGACTCTGAGATCGAGTGCGTCGTCGAATCGGAGGAGGGCTCCGCGCAGGTATCTTGGCTTCCTTAACCACCGCCCC
TGCATTTCCTTTTCGTTGCTTCGAGATAGTAGTTTGACTCCATTTATCCACGATCGAGCTTTATTATTTGTGGTGTGAAT
ACCGGAG--------------------------------GAAATACCTTGATCCCGCGTATTTGGGAAATATTAGGAACG
GAACCAAAATTAAGGTTATCGATTCAAGACTGTTTAG-------------------------------------------
-------------------------CCTT-TCATAC------T--AGTAGTACTAGCTATGCCCGTGATTGTTGCTCCTG
CAGTGAACAGCTAACTCTGGGAATCTTTCATCCCTGCATCTCAAATTGCAAAGG--------TGCTACATTGCTGGCATG
CCGTTAGTCAGTAATGGTGACTAT---TCAGGATTAAACAATTAAAATGGTAGTGGTAGGGGTAGTAAAAAGGAAATATT
GTTAATATATTACAAAACCCCGGTTGC-GAGATCCTGGCCTGTGCTGGAT-------GCTCCAGCTCAATCCAAGAGGTT
CACAAACTTGACTTTGTTAGGTCAACTTTTCAGATGTTCAAGTCATTCCCCTTCTAAACTACTCCCTCCGTAAACTAATA
TAAGAGCGTTTAGAATAC-----------TAAAATAGTGATTTAAACGCTCTTATATTAGTTTACAGAGGGAGTACTCCC
TCTGTTCCTAAATATAGGTCTTTCTAGAGATTTCAATAAGTGACTACATACGGAGAAAAATGAGTGAATCTACACACTAA
AATGTGTCTATATACATCCTTATGTGGTGGTCCATTTGAAATCTCTAAAAAGACTTGTATTTAGGAACGGAGGGAGTATT
TATGAGTCAATTGGACATTAGTAGATGAAGTTTGTGCACATTTGAAATGTTTATTCAGGGAAGTGAACATTTGAAATGTA
CCTTACGTGGTATTAATTGTTCTCTGAGGTCCATAA-------------ACTCCAGT-ATATG---CTATATGTCAATTT
GATAAAGTGTTAT-------------------------ACTGCGATGATGTAAAG-------------------------
------------------------------------------------ATGGGTTTCATAGACTGATGTCGCATACTATA
TCTTGTGTTATACTTATGCTTTG-------------------------------------CAAGTACTTGATTGTTTTAT
CTTGTTAATAGGAAGAAATGCTTTAGTTTTGCTTCAAAATAACCTTTTGTCTGTCTGTAAACACTATTATGTGATATTTT
TTTGAAAGGACATGACCATAATACTTGTTTTGAATTGT--TTCTAACAGCAAATTGATCCACCAGAAGACTTCCCCTTTG
AGATAATTGATAACCCTGGTGATCAGTCCATCGTTCTCAAAAGAGAGCTTGCAGGAGAGACTATTAAAGCTACTGTATAC
ACAAATTTTGATACTGAGGAAGATTTGAACAATGAGGATTCTGATGCTGAGAATGATGATGACTCATTTAAGCCAGCACT
TCAGATGGTTGTCACTGTTGAGAAACCAGGAAACGCAGTCCTGGAATTTGAGTGCAACTTTAATGATGATGAACTGGCAA
TTGAAAATATGAGGTTGCTGAATCGCGATGCCATCTCTACTGAGAATGCATATGAGGGGCCACAATTCTCGTAAGTTCAA
TTTTTCTTATCCAGCTTCTGTTATTTCTTCAATTTCAAGCATCATAATAAGCCAACCAGATGGTTGCTGAATCACAATAA
AACAAAATGGTA-------------TACATACAAGGATCCTTGGTCACATATTTC---TTGTT---TTACAAGAAATGGC
TCAAGCTTGACAGTTCTTTCTTGTATGTGTTTCTCCCCTGGCTGATTATTCAATCCAATGTTCTGTTTACTTACT-----
--------------------------------------------------------------------------------
-------------------------------------------------------------------CATTGCATCTTGT
GGTTTC-TTCTGATGTTTACTTACTCATTGTTTTCTACAGTGATCTGGACGAGAGCTTGCAGAAGTCCTTTCACAGGTAT
CTTGAGGTGAGGGGGATCAAGCACTCGCTGCATGACTGGCTGCACGAGTACATGATGAGCAAGGATGAGAAGGAGTACGT
GGTTTGGTTGAAGAACATGAGAGAGTTCATCGAGAAATGAGTGCCACTGCCTGTCATTCTCTTTTAATAGAAAGAACATG
CCTGGTGCTCTATGTCAAACCTGTCTGATCATAAATGTGCATTGCTTTCTGGCACGCCAAGTCTCGGTGAACGCCGAGCT
GAATTTACATTTTGCTGGACCTGTT-AGCTGTAGAAGAGCTTCGGCATCTTATCTTTTGATGTTTAACCTGTGATCCATT
CAGGTATGATCCGTTAATGTATTTTCAGCTGCGAGTATATTGCTACG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AACGTTCTAGAACTATGAGGGGATGATTCA
GAGATATAATTGAATGTGCACATTAGTTGAATAATTTACGATTGAAATAATTAGTGTAACCTGCAAGCCATTTAGATTCA
AGCTT-TACAAGTTTGTATCCCAAGAAAGGAAGAGGGTGACGTTTTGGAACTCC-------------TGATTTATGCTTG
GCTGCTACTTCTATGACCTCGTG--ATATG--ATTGTTTAAGCCATGCGCGTGAGAGAACGGTGACCGGAGAACCAGCAA
ACTTAAAAATCCGAATCAGTTGTACAGCAAAAGCAAACAATTCCTTCGAGTTTTCT--TGCTTCAGTTCTGTCGGCTGAC
AGAGCTGAGTGTCCTCTCCG------------------------------------------------------------
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>chr7A_820
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------------------------TGAGCTCTATGGGCCGGAAGGGCATTCTCAAGTACACTGGGTTGGGCCGCTGAGCT
TCTCTGCTGAGCTCCATTACTTCTTACCTTTTCTCCAAGTCTTCTCCATTCGGCCTCCAGCCCTTTAAACCCCACAAAAC
CCTAGACTTCGCAGCGAGCACCCGTCGTCGGATCCCCAGAGAAACACCAAAGCCCGAGCCATGTCGTCGGCGTCCCTCGC
CGCCAGGCTCCTCCGCCGCGCCGCCTCTTCGTCGCGGGCCTCCACCCTATCCCGACGCTGCGCCCACTCCTCCGCGACTT
CCCGCGCGCCCGTTTCGCTCGCCCAGTTCCACCCCGCC------------GCCGCCGCCGCCGCCGCCTCCCCGTCAGGG
GCCCCTGCCCGCCGCTTCCTGTCCTCGCAGTCCCCGGCGGCTTCCTCCAAGATCTCCCCGGACGAGAACCTGAGGCGGGT
CATCGACTCCGAGATCGAGTGCGTCGTCGAATCGGAGGAGGGCTCCGCGCAGGTCTCTTGGCTTCCTTAACCATCGCCCT
TGCATTTCCTTTTCGTTCTTTCGAGATAGTAGTTTGACTCCATTTATACACGATCGAGCTTTATTATTTGTGGTGTGAAT
ACCGGAGGAAATACCTTTTTTTTTTGCGAAGGACCGGAGGAAATACCTTGATCCCGCGTATTTGGGAAATATTAGGAACA
GAGCCAAAATTGAGGTTGTCGATGCAAGACTGTCTAG-------------------------------------------
-------------------------CTTT-TATGTGGTATAAAGCAGTAGTACTAGCTATGCCCGTGATTGTTGCTCCTG
CAGTGAACAGCTAACTCTGGGAATCTCTCATCCCTGCATCTCAAATTGCAGAACAAGGACTCTGCTACATTGCTGGGATG
CCGTTAGTCAGTAATGGTGACTATTCATCAGGATTAAAGAATTAAAATGGTAGTGGTATGGATGGTAAAAAGGAAATATT
GTTGGTATATTACAAAACCC-GGTTGGTGAGATCCTGGCCTGTGCTGGAT-------GCTCCAGCTCAATCCAAGAGGTT
CACAAACTTGACTTTGATAGCTCAACTTTTCAGATGTTCAAGTCATTCCCCTTCTAAACTACTCCCTCCGTCCCATAATG
TAAGACGTTTTTTTTACACTAGTGTCAAAAAACGTCTTGCATTATGGG--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACGGAGGGAGTATT
TATGAGTCAATTGGACATTACTAAATGAAGTTTGTGCACATTTGAAATGTTTATTCAGGTAAGTGAACGTTATAAATTTA
CCTTACGTAGTATTAATTGCTCTCTGAGGTCCATAA-------------ACTCCAGT-ATATGGTACTATATGTCAATGT
GATAAAGTGTTAT-------------------------ACTGCGATGATGTAAAG-------------------------
------------------------------------------------ATGGGTTTCATAGACTGATGTCGCATACTATA
CCTTGTGTTATACTTATGCTTTG-------------------------------------CAAGTACTTGATTGTTTTAT
CTTGTTAATAGGAAGAAATGCTTTAGTTTTGCTTCAAAAGAACCTTTGAATGT------AAAACAATACTCTGATATTTT
TGAAAAAGGACATGACCAAAATACTTGTTTTGAATTGT--TTTCAACAGCAAATTGATCCACCAGAAGACTTCCCCTTTG
AGATAATTGATAACCCTGGTGATCAGTCCATCGTTCTCAAAAGAGAGCTTGCAGGAGAGACTATTAAAGCTACTGTCTAC
ACAAATTTTGATACTGAGGAAGATTTGAACAATGAGGGCTCTGATGCTGAGAATGATGATGACTCATTTAAGCCAGCACT
TCAGATGGTTGTCACTGTTGAGAAACCAGGAGGCTCAATCCTGGAATTTGAGTGCAACTTTAATGATGATGAACTGGCAA
TTGAAAATATGAGGTTGCTGAATCGCGATGCCAAGTTTACTGAGAATGCATATGAGGGGCCACAGTTCTCGTAAGTTCAA
TTTTTCTTATCTAACTTATATTATTTCTTCAATTTCAAGCATCATAATAAGCCAACCAAATGGTTGCTGAATCATAATAA
AACAAAACGGTA-------------TACTTTCAAGGATCCCTGGTCACAAATTTCGTGTTGTT---TTCCACGAAATGGC
TCAAGCTTGACA----TTACTTGTATGTGTTTCTCCCCTGGCTGATTATTCACCCCAAAGTTCTGTTTGCTTAAGTACTT
AGATGACTACTACTCCCTCCGTTCCATATTACTTGTTGCTGATTTAGTACAAAGTCTCCCTCCGTTCCATATTACTCGTT
GCTGATTTAGTACAACTTTGTACTAAATCAGCGACAAGTAATATGGAATGGAGGGAGTAGTAAACTGCATTGCATCTTAT
GGTTTC-TTCTGACATTTACTTACTCATTGTCTTCTACAGTGATCTGGATGAGAGCTTGCAGAAGTCCTTCCACAGGTAT
CTTGAGGTGAGGGGGATCAAGCACTCGCTGCATGACTGGCTGCACGAGTACATGATGACCAAGGATGAGAGGGAGTACGT
GGTTTGGTTGAAGAACATGAGAGAGTTCATCGAGAAATGAGTGCCACTGCCCGTCATTCTCTTTTAATAGAACGAACATG
CCTGGTGCTCTATGTCAAACCTGTCTGATCATAATTGTGCATTGCTTTCTAGCACGCCAAGTCTCGGTGAACGCCGAGCT
GGATTTATATTTTGCTGGACCTGTT-AGCTGTAGAAAAGCTTCGGCATCTTATC-TTTGATGTTTAACCTGTGATCCATT
CAGGTATGATCAATTAATGTGTTTTCAGCCGTGAGTATATTGCTACGTACTCTCTCCGTTCCTAAATATAAGTCTTTATA
GACATTTCAAATGGACTACAACATACGGATGTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCGGTATGT
AGTCATTTATTGGAATCTGTAAAAAGACTTATATTTAGGAACGGAGGGAGTACGTTCTAGAACCATGAGGGGATGATTCA
-AGATATAATTGCCTGTGGACATTAGTTGAATAGTTTACCATTGAAAACAAATA-GTAACCTGCAAGCCAGTTAGATTCA
AGCTT--ACAAGTTTGTATCCCAAGAAAGGAAGAGGGTGACGTTTTGAAACTCC-------------TGGTTTATGCTTG
GCTGCTACTTCTATGACCTCGTGATATCTG--ATTGTTTAAGCCATACGCGTGAGAGAACGGTGACCGGAGAACCAGCAA
ACTTAGAAATCCAAATCAGTTGTACAGCAAAAGCAAACAATTCCTTCGAGCTTTCT--TGCTTCAGTTCTGTCGGCTGAC
AGAGCTGAATGTCCTCACCG------------------------------------------------------------
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>chr1D_1065
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--------------------------------------------CCCTGTCCCAGCGCTGCGCCCCCTCCTCCGCCACGT
TCCGCGCACCCGTTTCGCTGGCACGTTTCCGCGCCTCC------------GCCGCCGCCGCTT---CCCCTCCTTCACGG
ATCACCAGCCGCCGCTTCTTGGCGTCACAGTCCTCGGTGGCCCCCTCCGAGATCTGCCCGGACGAGAACCTGAAGCGGCT
CATCGGCAACGAGATCGACCGCGTCTTCCTGCCGGCGGAGGCCTCCGCGAAGGT-TCTTGACTTCCCTAA-CACCGCCCC
TGCATTTTCTTTTCGTTGC----------------GACTCCATTTATCAGCTACTGAGCTTTGTTCTTTCTTGTGTGATT
ACTGGGA--------------------------------CAAATGCCTTGATCCCGCATATTTGGAAAATATTAGGAACA
TAACCAAAATTAAGGTGATTATTTTGCTGGTTACAGCTCACAGTTGGAAGCCAAAGTTAGTAGGTTGCTGATCTTGTATG
TAGGTGAGTATCGGTTTAAGGCAGCCTAT-TATGTGGTACAAACTAGTACTTGCAATCTCTGCTTTTGGCTATACAACAT
TAAAGAACTCATTAAAC---------------------------------------------------------------
--------------------------------ACTACAGTATTAAGGTGGTAGCGGTGCCGATGGTAAAAATCAAACTTG
GCAGTACATTGCT-----------------------------------------------------------AACAGGTT
CACAAACTTGACTTTGGTAGCTTAGTTTTTGAGATGTTCAAGTTATTGATCTGCTGCAT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TATT
AAAGAGTCAATTGGACATTAATAGAGAAAGTTTGTGAACATTTGAAATGTACATGTTCCTTGCAACAGGTTGAGTATTAC
GA-----TAGTATTAATTGTTGTCCGAGATCCATAA-------------ACTCTAGTTATAAGCTA-TATATATCAGTGT
GAAAA-ATCTTAT------------------------AGCTGCGATCATGTAAAG-------------------------
------------------------------------------------ATGGGTACAAGGCTATGACGTCCTATACTATA
CCTTGCTATTCTTA-------TG-------------------------------------CAAGAACCAGATTGTTTTGT
CTTGTTACTTGGCAGAAACGCTTTAGTTTTGCTTCAAAAGAACCTTTTTCTGT------AAA-TATTTCTCTGATATTTT
AAAAAAATGACATGACTGTAATACTTGTTTTCATTTGTGTTTTTAACAGCTCATTGAACTACCAGAAGACTTCCCCTTTG
AGATAATTGATAACCCTGGTGATCAAGCCATAGTTCTCAAAAGAGAGCTTGCAGGAGAGAGAGTCAAAGCAATTATCTAC
ACAAATTTTGATACTGACGAAGATGTGAACAATGATGACTCTCATGCTGAGTATCATATTGACTCATTTAAGCCTGTGAT
TCAGATGGTTGTCACTGTTGAAAGACCAGAAGTTCCAGTCCTGGAATTTGTGTGCAACTTTAAAGATAAGGAACTGGCAA
TTGAAAATATGAGGATGCTGAATCGCAGCAGCGTTGATGCTAAGTATGCGAACGAGGGGCCACAGTTCTCGTAAGTTCAA
GTTTTCTCATCTAGGTTGTATTGTTCCTCCAATTTCAATCATCATGATAAGCTCCAACCAGGGCTGCTGAATAATAATCA
AATAAAATGGTAATACCTTGAATGATACTAACATGGATCCTTGGTCACAAGGTTAATAT---------------------
-------------TTCTTTCTAGTATGTGTTTCTCCCCTTGCTGATTATTCACCCGTGTCTTCTGTTTACTGAAGTACAT
AGATTACTGCTGAAGCA---------------------------------------------------------------
-------------------------------------------------------------------CATTGCATCTTAC
GGTTTTGTTCTGATGTTTAGTTGCTCACTGT-TTCTACAGTGTTCTGAAGGAGAGCATTCGGAAGTCCCTGCACGGGTGT
CTTGAGGTGAGGGGGATCAAGGACTCACTGCATGACTGGCTGCACGAGTATATGATGTGCAAGGATGAGAGGGAGTACGT
GGTTTGGTTGAAGAAGATGAGAGACTTCCTCCAGAAATGATTGCCACAGCT----ATTCTGTTTCAATACAAAGAACATG
TCTGGTG-----------------------------------------------------GTCTTGGTGAACGCCAAGCT
GGATTTATATTTTGCTGGACCTGTT-AGGTGTAGAAA-GTTTCAGCATTTTATC-T-TGCTATCTAACCTGTGACCCATT
GATGTATGATGAATTAACATGCTGTCAGCCATGAGTATAGTGCTA-----------------------------------
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>chr1A_1858
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----------------------------------------------------------------------------TATT
AAAGAGTCAATTGGACATTAGTAGAGAAAGTTTGTGAACATTTGAAATGTACATGATCCTTGCAACAGGTTGATTA----
--TTATGTAGTATTAACTGTCGTCTGAGATCCATAA-------------ACTCTAGTCATAAG---CTATATGTCAGTGT
GAGAAAATCTTAT------------------------CACTGCGATCATGTAAAG-------------------------
------------------------------------------------ATGGGTACAAGGCTATGACGTCCTATACTATA
CCTTGTTATTCTTA-------TG-------------------------------------CAAGAACGAGATTGTTTTGT
CTTGTTACTTGGCAGAAACGCTTTACTTTTGCTTCAAAAGAATCTTTTTCTGT------AAA-CATTACTCTGATATTTT
AAAAATATGACGTGACTGTAATACTTGTTTTGAATTGTGTTTTTAACAGCTCATTGAACTACCAGAAGACTTCCCCTTTG
AGATAATTGATAACCCTGGTGATCAAGCCATAGTTCTCAAAAGAGAGCTTGCAGGAGAGAGAGTCAAAGCAATTATCTAC
ACAAATTTTGATACTGATGAAGATGTGAACAATGATGACTCTCATGCTGAGAATCATATTGACTCATTTAAGCCTGTGAT
TCAGATGGTTGTCACTTTTGAAAGACCAGAAGGTCTAGTCCTGGAATTTGTGTGCAACTTTAAAGATAAGGAACTGGCAA
TTGAAAATATGAGGATGCTGAATCGCAGCAGCGTGGATGCTAAGTATGCGTACGAGGGGCCACAGTTCTCGTAAGTTCAA
ATTTTCTCATCTAGGTTGTATTGTTCCTCCAATTTCAATCATCATAATAAGCTCCAACCAAGGCTGCTGAATAATAATCA
AATAAAATAGTAATACTTTGAATGATACTTCCATGGATCCTTGGT-ACAAGGTTAATAT---------------------
-------------TTCTTTCTAGTATGTGTTTCTCCCCTTGCTGATTATTCACCCGTGTCTTCTGTTTACTGAAGTACAT
AGATTACTGCTGAAGCA---------------------------------------------------------------
-------------------------------------------------------------------CATTGCATCTTAC
GGTTTTGTTCTGATGTTTAGTTGCTCACTGT-TTCTACAGTGTTCTGAAGGAGAGCATCCGGAAGTCCCTGCATGGGTAT
CTTGAGGTGAGGGGGATCAAGGACTCACTGCATGACTGGCTGCACGAGTACATGATGTGCAAGGATGAGAGGGAGTACGT
GGTTTGGTTGAAGAAGATGAGAGACTTCCTCCAGAAATGATTGCCGCAGCT----ATTCTGTTTCAATACAAAGAACATG
TCTGGTG-----------------------------------------------------GTCTTGGTGAACGCCAAGCT
GGATTTATATTTTGCTGGACCTGTT-AGGTGTAGAAAAGTTTCGGCATTTTAGC-T-AGCTATCTAACCTGTGACCCATT
GAGGTATGATGAATTAACGTGCTTTCAGCAATGAGTATAGTGCTA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>SNPs
-----S--S-S---------S--S--S--SSS--------SS---------S---SSSSSSS---S--S-----S-S---
S--S-SSS-S--S--SSSS--SS---S---------------S-S--S--SS--S--S-----S----------------
---SS-----S--S--S--S----SS--S---SS---S--S--S-SSSSSSSSS--S---S---S--SS------S--S-
----S---S---SSSS-SSS--S-----S---------S-S-SSS-----S-S-S-S-S-S---S-SSSSS-S-S--S--
-SS--S--------S-------S----SS---------S----SS-----SS--S----S--S-----S--S--S---S-
S--S-----S-----S-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS------------------S--S-----------S--------------S-S-----
-------------------S-------------S----------------------------------------------
-----------------------------S--------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-------------S-------------------S----------------------S-----------------------
---------------------------------------S------------S---------------------------
--------------------------------------------------------------------------------
-------------------------S---S---------S-S--------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------S---------SSSSSSS-----------------S-----
--------------------------------------------------------------------S-----------
-------------S-S----------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----S-------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-----------------------------------------------------------------------------S--
-----------------------------------------------------------------S--------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------------------------------------------------------------SSS--------------
------S-----S-S----------------------------------------S---------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S--------------S-------------S----S-----
-------------------------S-------------------------------S-------------------S--
---S-----------S----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
------------S----------S--------------------------------------------------------
-----S------------------------------S------SS---------SSSSSSSSSSSSS----S--------
------------S------------S--SSSS------S-----S-----------SS----------------------
-----------S----S--S---S-------S-S------------SS------SSSS-------SS-S----S------
--SS---------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_425
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----GTATGACCTTCCGCCTCGAG-------------------------------------------------------
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-----------------------------
>reverse_1895
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------------------------------------------------------CAGGCTCCAGCTCAATCCAA------
--------------------------------------------------------------------------------
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-----------------------------
>forward_699
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------CGTCAGGATGGATTCTCGGG---------------------
--------------------------------------------------------------------------------
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-----------------------------
>reverse_1896
--------------------------------------------------------------------------------
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-------------------------------------------------------AGGCTCCAGCTCAATCCAAT-----
--------------------------------------------------------------------------------
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-----------------------------
>forward_748
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------TTGGAACCTGCGTACTCCAC----------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2039
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--------------------------------------ACATTATGGGACGGAGGGAGT---------------------
--------------------------------------------------------------------------------
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-----------------------------
>forward_802
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------CTCGACTCTATGTGCCCA
CC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_2924
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-------------------------------------------GTGCTGAGAATGATGATGACTCA--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------
>forward_804
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------CGACTCTATGTGCCCA
CCAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3295
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--------------ACTTTCTTGTATGTGTTTCTCCCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------
>forward_1915
--------------------------------------------------------------------------------
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-------------------------------------------------------AGGCTCCAGCTCAATCCAAT-----
--------------------------------------------------------------------------------
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-----------------------------
>reverse_4285
--------------------------------------------------------------------------------
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--------------------------------------------ATGGAACTCCTGAAGCAGCC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
