>input_sequence_38953
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------------------------------------ATGGGGTCCAACGAGGCGGACAAGCCGCTGCGGCGGATCGGCGC
GTCGTTCGAGCAGCTCGCGGCCGTCGCCAAGCAGCAGCAGC---AGCAGCCCGCGATGGCGGCGGGGGACTTCTCGCGCG
CCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGCA
AGCGCCCGCTCCTCCGCCCCCCTCTCCTCCCCTCCCCGCTACCTGCTCTGCTCTAGCTCGCGTCTCGCGATTCCTCCCCC
GGTTGGAGCCCTCGGCTGCTTAGGGCGAGTCGGCTGTTCGGTATGCTACTTCGTTGTGCT-----TGTATGTGGTAAAAT
TTCTGGTGATTCCC----GGGACATTGGTTTCGTTGTGTG--AAGCCTGGGAG-GTTTGGGGTGAAATGACCTCAAAATT
CTCAA-CCGGATCGAGTTGGC-AAGTTCTG-TTTTGAGTTCGTTTTGAA--TTGTACTCTGCATAGCTGTG---CATCCA
TGTGGTGAGGTAATTGTGCCAATCCATTTTAGTTTGAGGCTAGGAGGTTTGGG-TGAAATGATCTG--TCGAATTCCGAA
CTGGATCAAGCAGCAATAATTGGGTGTTTCATCGGGATCGGACTGTCTAATTCTGTTACTGTGTCTGTGTGCTATGCTTG
TTGCGGT-G--TGTGCTTCAGGTGTACAAAATCCTACCCACTTCTGCACTTGAGTTAGT----ACTACTGCTTTAATTGT
ATACATCTCTGGTTTAAGGTAATTGTGGTGATCCCCTGGGCTTGTTCAAGGCTAGGAGGTTAGTGCGAGGTGGTCTCAAT
TAATTTTCAGCTTGATCAAGCCAGGAATTATTGTGTGCACATAAGGACCA------------GATTATCTATTTCAGGCT
TTCAGCTACTATTGTGATATGCTTGTTCTGATGTATGCTTAAGAGGTGTTGGAACTTCCAACCTAATTCTGCACTTATTT
TAGCACTACTGCTTAGCAAACCAAGCGTGCGGCCATTTCGGGTTTCACATGTTATCTTGTTACAGAAACCT---------
---------TGATGACTGACTTCGTGCCATCGATTACCTAGTTAGTCGCAGCATCCCCTTTTCAAGGCTTTTGTTTGGTG
ATCTTGTCTGATTACTTCGTTTTACTTGGTTGCAGGTTGATGATTTACTGGAGGCATCCAAGACGATTTCGACACTGCCC
TCCATGGTTGAGCTTGACATTCAGAAGGGCACTGTCAGGCAGGCGGGGAGCCATACGAGGAATCTACTCAGGGTTAAGCG
TGGGATTGATATGGTGAAAGTTCTGTTTGAGCAGATATTAGTCACAGAGTAAGTTCAAGTTGCAAACGGGGTAGTGCTGT
CACTTATATTATGTTGT----------------------------CAACCCTTTAGTTTGCTACTCTTACATGCCTGTTG
AGTAAATGTTACCTGAGTGCTCACATTCTCTTCTGTT-TCAGAGGCAACTCCCTGAAGGACGCAGCGTCAAAGGCTTATG
CTCAGGTGTTTGCTCCTCACCATGGCTGGGCCATAAGGAAAGCAGTTGGTGCTGGAATGTATGCCCTCCCTTCTAAGTCA
CAGCTCTTGAAGAAACTGAATGAAGATGGTGAGTA--TCCTGATCCCCAGAGCACCGATTTATCTCTTCTGTAGTTTA--
-----TATTACTCTGAGCTTCCATGCCAGGCATGCAACTCACATCATTTGCTGACATGATCAGATCACATTGCTTTT-TG
GTTGCCTTACAAA--GCGTAGCTCTAATTGTTTGTTTGTATAGATGTTTGCTTGCATTAGAGGGGGTCATATGCAAGTTC
ATATA------------TACAGTTCTATAGTTGATCAGGTCGCATAAAGAGAGAATGATTGGGACGAAATATGCCAAAAA
TACAATAAGATATGTTATATTTTTTCATCTCGGTGTCACTTGATTCTGATCTCAGGTCACTGCCTCTTTTTTTACCTCGC
AGAAAATTCGGCAAGGGCTCAAATGCAGAGTTTCGTCAGGTCGTCTGGACCAGTAATTCTCTACGTCGAAGACCTCTTCA
CCTCCAAGAATTTAGGGCTAGACTGGTGA---------------------------------------------------
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---------------------------------------------------
>chr5B_1_TraesCS5B01G425200
AAGGCAGCAAATACCAACATCCTACAAATGCTGTTCATGTCAGTTAGACAACATACACCCCAAACCGTCCCA-TTGTTCT
GCAGAATATGCTATTACTATTACGAAATCGGGTGTG----CAGGTTCGTCAACAATATAGAAACGGAATGCGTATCTATT
CTAAGTTTTAAGCAAGCAAGCAACTGGCCAAATACTCTAGTTCATTCAGTTGAAGGAGCCAAGGCACTGGGGTAAGTGAG
AAGCAGGAGACCTTGTCGCGTGCGGAAGCCTCGGCGGCCCTCGCCTCTTCTT---------CCGCGGCTGCCTCCTCGGC
GGCACGCGAGGCGGCCTTCTCAAGCCAGCGGCGCTCGGCGTCCTCGAAGGCGCGGCGCGCGCGGTCGGACGCGGCGGCCT
CGGCCTCCTCGAGCTCTCGGAGGCGGCGCCCCTCCTCTGGGTCGGCGGCGAGCGCCTCTGCTGCAGCCCGCGCGGCCGCC
GCCGCCTCCCTGCGCGCGCGCCGGCGGCGCTCCTTCTTCCGCTCCTTCCGCCTCTCGCTCCTCGTCGACGCCGCCGGGAG
ATCACCGGCCGCCGTGGACATGGACGCTCGGATGGA------------AGCTCCTCGATCCACCCCCTCGGCCTCTTGGC
TTTTTT---TAGGGCTTTCTCTGTCGAGCAAGGCCCAGTTCCTTTGGAGTG----------------------GAAATTA
AGCTAGAAGCCC--AAAAAAACATACTTACGCTTCATGGGCCTAGCAGAGAATGGCCCAAGTTGTTTCATTCCATTCCGT
GGCCCGAGCCTGCTACCGCTCCCACTTTCAGGCCCATCACGGGACCGACCGACCCCAACCTCGCCGTCATCGCCGTCGCC
CTCTTCA-------CACAACAACGCGT--ACAACCACCGAAAGCACAAGGCATCACCACGCATAGAGAGAGAGAGAAAAA
AAATAGCACAACGCATCAGCCCAGACGCCGACGCCACCCAA-----GCTCTCGAACTCGAAGCGCCCGCCCTCAACGCCG
GCGGCG---------AGCCGCGGCGGCGAGCGGCCGATGGGGTCCAACGAGGCGGACAAGCCGCTGCGGCGGATCGGCGC
GTCGTTCGAGCAGCTCGCGGCCGTCGCCAAGCAGCAGCAGC---AGCAGCCCGCGATGGCGGCGGGGGACTTCTCGCGCG
CCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGCA
AGCGCCCGCTCCTCCGCCCCCCTCTCCTCCCCTCCCCGCTACCTGCTCTGCTCTAGCTCGCGTCTCGCGATTCCTCCCCC
GGTTGGAGCCCTCGGCTGCTTAGGGCGAGTCGGCTGTTCGGTATGCTACTTCGTTGTGCT-----TGTATGTGGTAAAAT
TTCTGGTGATTCCC----GGGACATTGGTTTCGTTGTGTG--AAGCCTGGGAG-GTTTGGGGTGAAATGACCTCAAAATT
CTCAA-CCGGATCGAGTTGGC-AAGTTCTG-TTTTGAGTTCGTTTTGAA--TTGTACTCTGCATAGCTGTG---CATCCA
TGTGGTGAGGTAATTGTGCCAATCCATTTTAGTTTGAGGCTAGGAGGTTTGGG-TGAAATGATCTG--TCGAATTCCGAA
CTGGATCAAGCAGCAATAATTGGGTGTTTCATCGGGATCGGACTGTCTAATTCTGTTACTGTGTCTGTGTGCTATGCTTG
TTGCGGT-G--TGTGCTTCAGGTGTACAAAATCCTACCCACTTCTGCACTTGAGTTAGT----ACTACTGCTTTAATTGT
ATACATCTCTGGTTTAAGGTAATTGTGGTGATCCCCTGGGCTTGTTCAAGGCTAGGAGGTTAGTGCGAGGTGGTCTCAAT
TAATTTTCAGCTTGATCAAGCCAGGAATTATTGTGTGCACATAAGGACCA------------GATTATCTATTTCAGGCT
TTCAGCTACTATTGTGATATGCTTGTTCTGATGTATGCTTAAGAGGTGTTGGAACTTCCAACCTAATTCTGCACTTATTT
TAGCACTACTGCTTAGCAAACCAAGCGTGCGGCCATTTCGGGTTTCACATGTTATCTTGTTACAGAAACCT---------
---------TGATGACTGACTTCGTGCCATCGATTACCTAGTTAGTCGCAGCATCCCCTTTTCAAGGCTTTTGTTTGGTG
ATCTTGTCTGATTACTTCGTTTTACTTGGTTGCAGGTTGATGATTTACTGGAGGCATCCAAGACGATTTCGACACTGCCC
TCCATGGTTGAGCTTGACATTCAGAAGGGCACTGTCAGGCAGGCGGGGAGCCATACGAGGAATCTACTCAGGGTTAAGCG
TGGGATTGATATGGTGAAAGTTCTGTTTGAGCAGATATTAGTCACAGAGTAAGTTCAAGTTGCAAACGGGGTAGTGCTGT
CACTTATATTATGTTGT----------------------------CAACCCTTTAGTTTGCTACTCTTACATGCCTGTTG
AGTAAATGTTACCTGAGTGCTCACATTCTCTTCTGTT-TCAGAGGCAACTCCCTGAAGGACGCAGCGTCAAAGGCTTATG
CTCAGGTGTTTGCTCCTCACCATGGCTGGGCCATAAGGAAAGCAGTTGGTGCTGGAATGTATGCCCTCCCTTCTAAGTCA
CAGCTCTTGAAGAAACTGAATGAAGATGGTGAGTA--TCCTGATCCCCAGAGCACCGATTTATCTCTTCTGTAGTTTA--
-----TATTACTCTGAGCTTCCATGCCAGGCATGCAACTCACATCATTTGCTGACATGATCAGATCACATTGCTTTT-TG
GTTGCCTTACAAA--GCGTAGCTCTAATTGTTTGTTTGTATAGATGTTTGCTTGCATTAGAGGGGGTCATATGCAAGTTC
ATATA------------TACAGTTCTATAGTTGATCAGGTCGCATAAAGAGAGAATGATTGGGACGAAATATGCCAAAAA
TACAATAAGATATGTTATATTTTTTCATCTCGGTGTCACTTGATTCTGATCTCAGGTCACTGCCTCTTTTTTTACCTCGC
AGAAAATTCGGCAAGGGCTCAAATGCAGAGTTTCGTCAGGTCGTCTGGACCAGTAATTCTCTACGTCGAAGACCTCTTCA
CCTCCAAGAATTTAGGGCTAGACTGGTGAGCGAAACCTATAC--AGAGATTTCCAATGTACTAATGCGACTAGATGGTGT
GCTGTGACCTCAAACAACTGTAGCTGGTTTTGGTG-TTTGAGTTCGAGAGTTCAGAGTTGCAACCTAAATTCAATAAGCT
G---TGCTACCGTGGAGGTTCTTGACGGG-TGGATA----CGGGAGCCGTTGTTACAAACCTGAAATTCCAGCTTATCTC
TAAGCTGTTAAACTGGAATGCTACCCTGCAATGTATGATGTAACAACATGAAATTCCAGCTTATCTCTATGCTGTTGAAC
TGGAATGCTACCTGCAATGTACTCCCTCCGTTCCCAAATACTTGTCTTTCTAGGCATTTCAAATGGACTCAACATACGGA
TGTATGTAGACATATTTTAAAATGTAGATCCACTCATTTTGCGTCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACA
AGTATTTAGGAACGGAGGGAGTATGATGCATGCTGTATGCATCTTTGAGAATATATAGTCTGATCAGAACAACTGCCAAG
GCTTGATTAATGAACCTACAAAATCCTTCGAATTGGATCTGACTAAATCCAGGTATTGTGGACATTCCCT----------
CGGAGCATCTTAATCTTAAGTTTCATGTTTATCAAAGAAAAATTCCATTATCAGCGCACTCTTCATCAATCCATCTTAAG
TTTCCTGTTTATCGAAGAAAAATTCCATTATCAGCGCACTCTTCATCAATCCCTATGGATCGAGCTAGCAATCACGGAAT
TCGCTATGCTATAAGGTAGCAATTCATTAAGGTATAAAACCACATCTACAGTGGGAGTTCCTATCTACTTTCGTTTCCCT
TCTTAGTCCCTATCTACTTTAGATTCCCTTCTTACTGGCTTTGCCAA---------------------------------
--------TACATCATATTGATTCGACACTTCCTTACGCTTTCTTTCAAGCATTGCTTTCAGGAAAACGGAGAGTATTCA
TGTTTGCTGCTTCATGTGAGTGCACGTCCGTGCATTTCCTGCTTTACCTGG
>chr5A_1
AAGGCAGCAAACACCAA---CCTACCAGTGCTCTTCATGTCAGTTAGACAACATACAACTTAAGCCGTCCCA-T-GTTCC
GCAGATTATGCTAT---TATTACGAAATCAGGTGTGTGTGCAGGTTCATGGACA--ATAGAAACGGAGTGCGTATCCATT
CTAGGTTTGAAGTAAGCAAGCAACTGGCTAAATACTCTAGTTCA----GTTGAAGGAGCCAAGGCACTGGGGTAAGTGAG
AAGCAGGAGACCTTGTCGCGTGTGGAAGCCTCGGCGGCCCTCGCCTCTTCTTCCGCAGCCGCCGCGGCTGCCTCCTCGGC
GGCACGCGAGGCGGCCTTCTCAAGCCAGCGGCGCTCGGCGTCCTCAAAGGCGCGGCGCGCGCGGTCGGACGCGGCGGCCT
CGGCCTCCTCGAGCTCCCGGAGGCGGCGCCCCTCCTCTGGGTCGGCGGCGAGCGCCTCTGCCGCAGCCCGCGCGGCCGCC
GCCGCCTCCCTGCGCGCGCGCCGGCGGCGCTCCTTCTTCCGCTCCTTCCGCCTCTCGCTCCTCGTCGACGCCGCCGGGAG
ATCACCGGCCGCCGTGGACATG------------GA------------AGCTCCTCGATCCACCCCCTCGGCCTCTTGGT
TTTTTTTTCTAGGGCTTTCTCTATCGACCAAGGCCCAGTTCCTTTGCAGCGTAGCAGCTTAACTTAGAAATTCC---TTA
AGCTACAAGCCCAAAAAAAAACATTCTTACGCTTCATGGGCCTAGCAGAGAATGGCCCAAGTTGTTTCATTCCATTCCGT
AGCCCGAGCCTGCTACCGTGCCCACTTTCAGGCCCATCACAGGACCAACCGACCCCAACCTCGCCATCATCGCCGTCGCC
CTCTTCA-------CACAACAACGCGTATACAACCACCGAAAGCACAAGGCATCACCACACAGAGAGAAAAAAAAAG---
----AGCACAACGCATCAGCCCAGACGCCGACGCCACCCAACCCAAGCTCTCCAACTCGAAGCGCCCACCCTCTCCGCCG
GCGGCGA----------------------CCGGCCGATGGGGTCCAACGAGGCGGACAAGCCGCTGCGCCGGATCGGCGC
GTCGTTCGAGCAGCTCGCGGCCGTCGCCAAA------CAGCAGCAACAGCCCGCGATGGCGGCGGGGGACTTCTCGCGCG
CCTGCTCCAACGTCTCCGTCCTCTTTGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGCA
AGCGGCCGCTCCTCCGCCCCCCTCTCCTCTCCTCCCCGCTACCTGCTCTGCTCTAGCTCGCGTCTCGCGATTCCTCCCCC
GGTTGGAGCGCTCGGCTGCTTAGGGCGAGTCGGCTGTTCGGTATGCTACTTCGGTGTGCT-----TGTATGTGGTAAAAT
TTCTGGTGATTCCG----GGGACATTGGTTTCGTTATGTGTGAAGCTTGGGAG-GTTTGGGGTGAAATGACCTCAAAATT
CTCAA-CCGGATCGAGTTTGGCGAGTTCTGTTTTGAGTTTATTTTTGATTGGTATACGCTGCATAGCTATGCATCATCCA
CGTGGGAAGGTAATTGTGTTGATC--------------GCTAGGAGGTTTGGG-TGAAATGACCTG--TCGAATTCCGAA
CTGGATCAAGCAGCAATAGTTGGGTGTTTCATCAGGATCGGACTGTCTAATTCTGCTACTGTGT------GCTATGCTTG
TTGAGGTTG--TACGCTTCAGGTGTAGAATATCCTATCCACTTCTGCACTTGAGTTAG----TACTACTGCTTTAATTGT
ATACATCTCTGTTTTAAGGTAATTGTGGTGATCTCCTAGGCTTGTTTAAGGCTAGGAGGTTAGTGCTAGATGGTCTCAAT
TAATTTTCAACTTGATCAAGCCAGGAATTAGTGTGTGCACATAAGGACCCTTTAGCAAAACTGATTATCTATTTCAGGCT
TTCAGCTATTATTTTGATATGCTTGTTCTGATGTATGCTTAAGAGGTGTTGGAGCTTCCAACCTACTTCTGCACTTATTA
TAGCACTACTGCTTAGCAAACCAAGCGTGCGGCCATTTCGGGTTTCACATGTTATCTTGTTGCAGAAACCTCATATACTC
ATGCGTGCTT----------------------ATTACCTAGTTAATTGTAGCATCCCCTTTTCAAGGCTTTTGTTTGCTG
GTCTTGTCTGATTACTTCGTCTTATGTGGCTGCAGGTTAATGATTTACTGGAGGCATCCAAGACGATTTCAACATTGCCC
TCCATGGTTGAGCTTGACATTCAAAAGGGCACTGTCAGGCAGGCGGGGAGCCATACGAGGAATCTACTGAGGGTTAAGCG
TGGGATTGATATGGTGAAAGTTCTGTTTGAGCAGATATTGGTCACAGAGTAAGTTCAAGCTGCAAACGGGATAGTGCTGT
CACTTATATTATGTTGTGATTAAAAAAAAACTTACAGTATGCTGTCAACCCTTTAGTTTGCTACTCTTAGATGCCTGTTG
AGTAAACGTTATCTGAATGCTCACATTCTCTTCTGTTTTCAGAGGCAACTCCCTGAAGGACGCAGCGTCAAAGGCTTATG
CTCAGGTGTTTGCTCCTCACCATGGCTGGGCCATAAGGAAGGCCGTTGGTGCTGGAATGTATGCCCTCCCTTCTAAGTCG
CAGCTCTTGAAGAAACTGAATGAAGATGGTGAGTGTGTCCTGATCTCCAGAACACTGTTTTATCTCTCCAGTAGTTTACA
CATGTTATTACTCTGAACTTCCATGCTAAGCAAGCAACTGAT------------------CAGATCACATTGCTTTTTTG
GTTGCCTTACAAAAGGCGTAGATCTAATTGTTTGTTTGTATAGATGTTTGCTTGTATTAGAGGGGGTCATATGCAAGTTG
CTTTTTGGTTGCCTTAGTACAGTTCTATAGTTGCTCAGGTTGCATGAGGAGAAAATGATTGGGACAAAATATGTCAAAAA
CACAATAGGTTATCTTAGCTTCTTCGTCTT-GGTGTCACTTGATTCTGATCTCGGGTCACTGCCTCTTTTA--ACCTTGC
AGAAAATTCGGCAAGGGCTCAAATGCAGAGTTTCGTCAGGTCGTCTGGACCAGTAATTCTCTACGTCGAAGACCTCTTCA
CCTCCAAGAATTTAGGGCTGGACTGGTGAGCAAAGCCTATACAGAGAGACTTCCAATGTACTAATGCGACTAGATGGTGT
GCTGTGACCTCAAACAACTGTAGCTGGTTTTGGTGTTTTGAGTTCGAGAGTTCAGAGTTGTAACCTAAATTCAATAAGCT
G---TGCTACCGTGGAGGTTCTTGACGGG-TGGATATGGGCGGGAGCCGTTGTTACAAACCTGAAATTCCAGCTTATCTC
TGAGCTGTTAAACTGGAATGCTACCCTGCAATGTA---------------------------------------------
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---------------------------------------------------
>chr5D_3
--GGCAGCCAATACCAACATCCTACAAGTGCTGTTCATGTCAGTTAGACAACATACACCTCAAACCGTCCCATT-GTTCT
GCAGATTATGCTAT---AATTAGGAAATCAGGTGTG----CAGGTTCATCGACAATATAGAAACGGAGTAGGTATCTATT
CTACGTAAAAAACTCTAT---------------------GTTCA----GTTGAAGGAGCCAGGGCACTGGGGTAAGTGAG
AAGCAGGAGACCTTGTCGCGTGTGGAAGCCTCGGCGGCCCTCGCCTCTTCTTCCGCAGCCGCCGCGGCTGCCTCCTCGGC
GGCACGCTCGGCGGCCTTCTCAAGCCAGCGGCGCTCGGCGTCCTCGAAGGCGCGGCGCGCGCGGTCGGACGCGGCGGCCT
CGGCCTCCTCGAGCTCCCGGAGGCGGCGCCCCTCCTCCGGGTCGGCGGCGAGCGCCTCTGCTGCGGCCCGCGCGGCCGCC
GCCGCCTCCCTGCGCGCGCGCCGTCGGCGCTCCTTCTTCCGCTCCTTCCGCCTCTCGCTCCTCGTCGACGCCGCCGGGAG
ATCACCGGCCGCCGTGGACATG------------GACGCTCGGATGGAAGCTCCTCGATCCGCCCCTTCGGCCTCTCGGC
TTTTCTT--TAGGGCTTTCTCTATCGAACAAGGCC-------------------CAGCTTAACTTAGAAAGAAGAAATTA
AGCTAGAAGCCC--AAAAAAACATGCTTACGCTTCATGG-----------------------------------------
-------GCCTGCTACCGTTCCCACTTTCAGGCCCATCACAGG----ACCGACCCCAACCTCGCCATCATCGCCGTCGCC
CTCTTCAGTCTTCACACAGCAACGCGTATACAACCACCGAAAGCACAAGGCATC--------------------------
-----------------AGCCCAGACGCCGACGCCGCCCAACCCAAGCTCTCGAACTCGAAGCGCCCACCCTCTCTGACC
GCGGCGCCGGCGGCGAGCCGCGGCGGAGGCCGGCCGATGGGGTCCAACGAGGCGGACAAGCCGCTGCGGCGGATCGGCGC
GTCGTTCGAGCAGCTCGCGGCCGTCGCGAAGCAGCAGCAGCCGCAGCAGCCCGCGATGGCGGCGGGGGACTTCTCGCGCG
CCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGCA
AGCG-------------CCCCCTCTCCTCCCCCGCTAC---------CTGCTCTAGCTCGCGTCTCGCGATTCCTCCCCC
GGTTG----------CTGCTTAGGGCGAGTCGGCTGTTCGGTATGCTACTTCGGTGTGCT-----TGTATGTGGTGAAAT
TTCTGGTGATTCCG----AGGACAT------------------------------TTCGGGGTGAAATGACCTCAAAATT
CTCAAACCGGATGGAGTTGGT-GAGTTCTGTTTTGAGTTTATTTTTGATTGGTATACGCTGCATAGCTGTGCGTCATCCA
CGTGGGAAGGTAATTGTGTTGGTCCACTTTAGTTTGAGGCTAGGAGGTTTGGGGTGAAATGATCTG--TCGAATTCCGAG
CTAGATCAGGCAGCAATAGTTGGGTGTTTCATCGGGATCGGACTGTCTAATTCTGCTACTGTGTCTGTGTGCTATGCTTG
TTGCGGT-G--TATGCTTCAGGTGTAGAAAATCCTACCCACTTCTGCACTTGAGTTAGTATATACTACTGCTTTAATTGT
ATACATCTCTGTTTTAAGGTAATTGTGGTGATCCCCTAGGCTTGTATAAGGCTACGAGGTTAGGCAGAGATGGTCTAAAT
TGATTTGCAACCTGATCAAGCCAGGAATTATTGTGTGCGCATAAGGATCA------------GATTATCTATTTCAGCTG
G--------TATTGTGATATGCTTGTTCTGGTGTATGCTTAAG--TTGTTGGAAGTTCCAGCATAC-TCTGCACTTATTT
TAGTACTACTGCTTAGCAAACCAAGTGTGCAACCATTTCCGATTTCACATGTTATCTTGTTACAGAAACCTCATATACTC
ATGCGTGCTT----------------------ATTACCTAGTTAATTGTAGCATCCCCTTTTCAAGGCTTTTGTTTGGTG
ATCTTGTCTGGTTACTTCGCCTTACGTGGTTGCAGGTTAATGATTTACTGGAGGCATCCAAGACGATTTCAACATTGCCC
TCCATGGTTGAGCTTGACATTCAGAAGGGCACTGTCAGGCAGGCGGGGAGCCATACGAGGAATCTACTGAGGGTTAAGCG
TGGGATTGATATGGTGAAAGTTCTGTTTGAGCAGATATTGGTCACAGAGTAAGTTCAAGCTGCAAACGGGATAGTGCTGT
CACTTATATTATGTTGTGATAAAAAAA--TTATAT--TATGTTGTCAACACTTTAGTTTGCTACTCTTAGATGTCTGTTG
AGTAAATGTTATCTGAATGCTCACATTCTCTTCTGTT-TCAGAGGCAACTCCCTGAAGGACGCAGCGTCGAAGGCTTATG
CTCAGGTGTTTGCTCCTCACCATGGCTGGGCCATAAGGAAAGCAGTTGGTGCTGGAATGTATGCCCTCCCTTCCAAGTCG
CAGCTCTTGAAGAAACTGAATGAAGATGGTGAGTGTGTTCTGATCTCCAGAACACCGATTTATCTCTCCTGTAGTTTACA
CATGTTATTACTCTGAACTTCCATGCCAAGCAAGCAACTCGCAAAATTAGCTGACATGATCTGTTCACATTGCTTTT-TG
GTTGCCTTAG--AAAGCATTGATCTAGTTATTTATTTGTATAGTTGTTTGCTTGCATTAGAGCAGGTCATATGCAAGTCC
ATATACAATTATATGTTGCGCATA----AGTTGATCAGGTTGCATGAGGAGAAAATGATTGGGACAAAATATGTCAAAAA
CACAATAGGTTATCTTAGCTTCTTTGTCTT-GGTGTCACTTGATTCTGATCTCGGGTCACTGCCTCTTTTA--ACCTCGC
AGAAAATTCGGCAAGGGCTCAAATGCAGAGTTTCGTCAGGTCGTCTGGACCAGTAATTCTCTACGTCGAAGACCTCTTCA
CCTCCAAGAATTTAGGGCTAGACTGGTGAGCAAAGCCTATACAAAGAGACTTCCAATGTACTAATGCAACTAGATGGTGT
GCTGTGACCTCAAACAACTGTAGCTGGTTTTGGTGTTT-GAGTTCGAGAGTTCAGAGTTGTGACCTAAATTCAATAAGCT
GTGCTGCTACCGTGGAGGTTCTTGACGGGGTGGATA----CGGGAGCCGTTGTTACAAACCTGAAATTCCAGCTTATCTG
TAAGCTGTTAAACTGGAATGCTACCCTGCAATGTATGATGTAACAACATGAAATTCCAGCTTATCTCTAAGCTGTTAAAC
TGGAATGCTACCTGCAATGTACT---------------------------------------------------------
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----------------------ATGATGCATGCCATATGCATCTTTGAGAATAGTCTGATCG----GAACAACTGCCAAG
GCTTGATTAATGAACCTACAAAATCCCTCGAATTGGATCTGACTAAATCCGGGTATTGTGGCATTCCCTCGTTTCCATTC
CGGAGCATCTTAATCATAAGTTTCCTGTTTATCAAAGAAA----------------------------------------
--------------------AATTCCATTATCAGCTCATTCTTCATCAATCCCTATGGATCGATCTAGCAATCATGGAAT
TCGTTATGCTATAAGGTACCAATTCAGCAAGGTATAAAACCACATCTACAGTGGGA------------------------
-----GTCCCTATCTACTTTCGATTCCCTTCTTACTGGCTTTGCCGGTACATCATATTGATTTGACACTTCCTTACTGGC
TTTGCCAGTACATCATATTGATTTGACACTTCCTTATGCTTTCTTTCAAGCATTGCTTCCAGGACAACGTTGAGTATTCG
TGTTTTCTGCTTCATGTGAGTGCACGGCCATGCATTTCCTGCTTCACCTGG
>chr1D_997
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--------------------------------GCCGATGGGGTCCAACGAGGCGGACAAGCCGCTGCGGCGGATCGGCGC
GTCGTTCGAGCAGCTCGCGGCCGTCGCCA------AGCAGCAGCAGCAGCCCGCGATGGCGGCGGGGGACTTCTCACGCG
CCTGCTCCAACGTCTCCGTCCTCTTCTGCTGCCTCGGCATCGCCTTCAAGTTTGCGGAGATGGACTACGTAGCCAAGGCA
AGCGGCCGCTCCTCCGCCCCCCTCTCCTCCCCCGCTAC---------CTGCTCT--------------------------
--------------------------------GCTGTTCGGTATGCTACTTCATTGTGCCTGTACTGTATGTGGTAAAAT
TTCTGGTGATTCCTTCCTGGGACATTGGTTTAGTTGTGTG--AAGC-TGAGAG-GTTTGGGATGAAATGACCCCAAAATT
CTCAA-CCGGATCGAGTTGGT-GAGTTCTG-TTTGAGTTTACTTTTGATTGGTATACGCTGCATAGCTGCGTGCCATCCA
TGTGGGAAGGTATTTGTGTTGATCCACTTTAGTTTTAGGCTACGAGGTTTGGG-TGAAATGATCTG--TCGAATTCCGAA
CTGGATCAAGCAGCAATAATTGGTTGTTTCATCAGGATCGGACTGTCTAATTCTGCTACTGTGT------GCTATGCTTG
TTGAGGTTG--TATGCTTCAGGTGTAGAATATCCTACCCACTTCTGCACTTGAGT-------------------------
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>chr4D_997
GCT-----------------------------------------------------------------------------
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-----------------------------------GATGGGGTCCAACGAGGCGGACAAGCCGCTGCGGCGGATCGGCGC
GTCATTCGAGCAGCTCGCGGCCGTCGCCA------AGCAGCAGCAGCAGCCCGCGATGGCTGCGGGGGACTTCTCACGCG
CCTGCTCCAACGTCTCCGTCCTCTTCTGCTGCCTCGACATCGCCTTCAAGTTTGCGGAGATGGACTACGTAGCCAAGGCA
AGCGGCCGCTCCTCCGCCCCC-TCTCCTCCCCCGCTAC---------CTGCTCT--------------------------
--------------------------------GCTGTTCGGTATGCTACTTCGTTGTGCTTGTACTGTATGTGGTAAAAT
TTCTGGTGATTCCTTCCTGGGACATTGGTTTAGTTGTGTG--AAGC-TGAGAG-GTTTGGGATGAAATGACCCCAAAATT
CTCAA-CCGGATCGAGTTGGT-GAGTTCTG-TTTGAGTTTACTTTTGATTGGTATACGCTGCATAGCTGCGTGCCATCCA
CGTGGGAAGGTAATTGTGTTGATCCACTTTAGTTTTAGGCTAGGAGGTTTGGG-TGAAATGATCTG--TCGAATTCCGAA
CTGGATCAAGCAGCAATAACTGGTTGTTTCATCAGGATCGGACTGTCTAATTCTGCTACTGTGT------GCTATGCTTG
TTGAGGTTG--TACGCTTCAGGTGTAGAATATCCTACCTACTTCTGCACTTGAGT-------------------------
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>chr2D_997
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--------------------------------GCCGATGGGGTCCAACAAGGCGGACAAGCCGCTGCGGCGGATCGGCGC
GTTGTTCGAGCAGCTTGCGGCCGTCGCCA------AGCAGCAGCAGCAGACCGCGATGGCGGCGGGGGACTTCTCGCGCG
CCTGCTCCAACGTCTCCGTCCTCTTCTGCTACCTCGGCATCGCCTTCAAGTTTGCGGAGATGGACTACGTAGCCAAGGCA
AGCGGCCACTCCTCCGCCCCCCTCTCCTCCCCCGCTAC---------CTGCTCT--------------------------
--------------------------------GCTATTCGGTATGCTACTTCATTGTGCTTGTACTGTATGTGGTAAAAT
TTCTGGTGATTCCTTCCCGGGACATTGG-TTAGTTGTGTG--AAGC-TGAGAG-GTTTGGGATGAAATGACCCCAAAATT
CTCAA-CCGGATCGAGTTGGT-GAGTTCTA-TTTGAGTTTACTTTTGATTGTTATACGCTGCATAGCTGCGTGCCATCCA
CGTGGGAAGGTAATTGTTTTGATCCACTTTAGTTTGAGGCTAGGAGGTTTGGG-TGAAATGATCTG--TCGAATTCCGAA
CTGGATCAAGCAGCAATAATTGGTTGTTTCATCAGGATCGGACTGTCTAATTCTGCTACTGTGT------GCTATGCTTG
TTGAGGTTG--TATGCTTCAGGTGTAGAATATCCTACCCACTTCTGCACTTGAGT-------------------------
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>chr2B_1354
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-----------------------------------------------------------------------------AAT
TTCTGGTGATTTCT----GGAACATTGGTTAGCCGCTTA---AAGC-TGAGAGAGGTTGAGGCGAAATAATCTC-AAATT
CTTAG-CCAGATTCAGCTAGC-AAGTTATG-TTTGAGTTCGTTTTGAA---TTACACCCTGCATAGCTGTG---GATCCA
TGTGGTAAGTTAATTGTAATAATACACTTTAGTTTGAGGCTAGAAAGTTTGGG-TGAAATGATCTCAATCAAATTCTCAA
CTGAATGAAGCAGCAATTATTGGGTGCTTCACCAGGATCAGACTGTCTAATTCTGCTACTTTCT------GCTATGCTTG
TTGTGGT-GTATATGCTTCATATGTAGAAAGTAATATCCACTTCTGCACTTGTGTTAGT----ACTACTGCTTCAATTGT
ATGTGTCTCTGTTTTAAGATAATCATGGTAATCCCCTGGACTTGTTTAAGGCCAGGAGGTCCGACCTAGATGGTCTAAAT
TAATTTTCAACTTGATCAAACTAGGAATTATTGTGTGCACATAAGGATCA------------GAGTGTCTTTTCTGA---
---------TATTTTGATATGCTTGTTCTGATGTATTCTTAAG--GTGTTGGAAGTTCCAATCTACTTCTGCACTTATTT
TAGTACTACTGCTTAGCAAACCAAGTGTGCAGCCATTTCGGATTATAGATGTTATTGTGTTACAGAGACCTCACATACTC
ATGCGTGCTTGATTGCTTACTTGGTGCCATCTAGGC---------------------------------TTTGTTTGGTG
GTCTTGTCTGATTACTTCGTCTTACGTGGTTGTAGGTTAATGATTTACTGGAGATATCCAAGACGATTTCAACATTACCC
TTCATGGTTGAGCTTGACATTCAAAAAGACAGTGTCAGGCAGCCGAGGAGCCATACGTGGAACCTACTGAGGGTTAAGCG
TGGGACTGATATAGTGAAAGTTCTGTTTGAGTAGATATTGGTCACAGAGTAAGTTCAAGTTGCAAATGGGGTAGTGAAGT
CACTTATATCATGTTGTGATAGAAAAAACTTATGT--TATGTTGTCAACCCTTTGGTTTGCTACTCTTAGATGCCTGTTG
AGTAAATGTTATCTGAATGCTCACATTCTCTTTTGTT-TCAGAGGCAACTCCATGAAGGACGCAGCATCCAAGGCTTATG
CTCAGGTGTTTGCTCCTCACCATGGCTGGGCCATAAGGAAAGCAGTATGTGCTAGAATGTACGCCCTTCCTTCTAACTCG
CGGCTCTTGAAGAAACTAAATGAAGATGGTGAGTGTGTTTTCGTCTCCAGAACACTGATTTATCTCTCCTGTAGTTTACA
CATGTTATTACATTGAACTTCCATGTCAAGCAAGCAGCTCATAAAATTAGCTGACATGATCAAATCACATTGCTTTT-TG
GTTGCCTTAG--AAAGC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>SNPs
---------------------------S-------------------------------S--------------S-----
-----S--------SSS------------S-----------------S--S----------------S------------
---S----S-------------------S---------------SSSS--------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SSSSSSSSSSSS----------------------------------------------
----------------------S----S------------------S--S------------------------------
------------------------S-------------------------------------------------------
S-----------------S---------------------S-----S------------------S--------------
-----------------------------------------------------------S--S-----S-S-S-S-SSSS
SSSS---------------------------------------------------------------S-----SS-----
--------------------------S-SS--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------S--------------------------------S---------------------------------
----------------------------------SSSS--SS------S----S---S----------------------
------S-----------SS------S-----------------------------------------------------
-------------------------------------------------------S------------------------
------------S-------------S-----------------------------------------------------
-----------S----------------------------------S----------------------S----------
---------S----------------------------------------------------------------------
--------S--------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-------------SS--S----S--------S------------S-S-S-------------------------------
--------------------S----S------------S-------------------------------S---S-----
--------------------------------------------------------------------S-----------
---------------------------------------S----------------------------------------
---------------------------------------------------------------------S----------
-----------S----S---------------------------------------------------------------
-------------------------------------------------------------------------------S
----------------------------------S----------S-----S---------------S------------
----------------S-----------S---S----------SS---S-------------------------------
---------------------S----------------------------------------------------------
----------------------------------------S----S-S----S------------S-------S------
S------S-S---S---SS--S---SSSS-S----------------------S----------------SSS-------
--------------------------------------------------------------------------------
-------------------------------S--S--------------S------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S------S---
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-----------SS------------------SSSS-SSS-SSSS--------------
--------------------------S-----------------------S----------SSS-S--SS----------
---------------S--------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS---------------S--S------------------------S----------S-----
---S--------------S-------SS----------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------S------------------------SS---------------------------------
-----------------------S------------S---------------------S-----S----SS--------S
-----S--------------------S--S--------------S------
>forward_690
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AGGCCCAGTTCCTTTGGAGT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GACTGACTTCGTGCCATCGA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_1910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GCTAGGAGGTTAGTGCGAGG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_3744
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TCAGAACAACTGCCAAG
GCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
