>input_sequence_38850
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----------------------ATGAGGCCGGTGTTCTGCGGCAACTTCGACTACGAGACGCGGCAGTCGGATCTGGAGC
GCCTCTTCTCAAAGTACGGACCCATCCGCCGCATCGACATGAAATCCGGTACTCAGCTCTCAGCTCTCATCGTGCTCTGC
TCGTGTA-------------------------------------------------------------------------
-TGCTCTGCTCTGCTCTGCTCGTGTCCCTCAAATAGAAATAGATGATAGATAGAT-------------------------
-----TGCTC----------------------------------------------------------TGCTCTGCTCTA
TGGATGAATGAATGAATGAACGAATG------------------------------------------------------
------------AATGAATGCTCAAAAAAGAAACAACTATCTAAATTTCAATGCAACTGTTTCTACATACTGCAGGCTAC
GCCTTTGTCTACTTCCAAGACGAGCGCGACGCCGAGGATGCAATAAGGCGCCTCAGCAACGCCGAGTTCGGCCAGACCAG
CCGCAGGCTCTCCGTCGAATGGTCAAGGGTAACC----C-TCTTTGTCTCTCTCTCTCTCTTTGTCTGTCGAATGAATGA
CATGTCTTCCTAAATTCAA--ATTCA-------------------TTCCTCCAGCAAGAGGAGCCGGTCCCCAAGAACCG
CGACAGGCCTACAGGGGCAGATGCAAAGCCCACCAGGACGCTCTTTGTTATCAACTTTGACCCCATCCGCACCAAAGTCG
TCGACATCGAGAGGCATTTTGAGCCCTACGGCAAGATTGCAAACATTCGTATCCGCAAGAACTTTGCTTTCGTGCAGTAC
GAGGCGCAGGAGGACGCCAGCGTAGCCGTCAACAAGACCGACAAGAGGTAT----CATCCGCTTCCCACTGCCCATCCTC
CATCCAGTATCAACAAA--------CAATGCTGCAAATCTTGTATGACTGACTGATTAGTTG------------------
-----TTTGCTCTACACTAGAGCCCTGGGCAGGCATGGCATTGCTCTGCTAT-TACTGCAT-------------------
-------------CTAATGATGCACTGATTCTTCGGTCATTTCATTTGGGGTGGGGTCCATAACATCTTCATACTGGATT
CCCTCCCCCC-GACTAGTTAGGTTATTTCGCATTGTGTGCTGAGGTCTCAAATTCTCTGCTACATCATGTGACTGATGCA
ATACCTGACATGGATTTTTAT--GATAGTTGGATGGTCTTTCTTCTTACAATAATTATTATTTTTACATCAATACGAAAG
CAAAACTGTTAGGTAGGCTGCAATTTTTAGGCCCTCAAATATTATCTGCGCGCTTGCTCCACTGAAGCACCGTCAAGTCA
TTAACTCTCCAATGTCGTAGGAAGGCTTGCTCTGCTCCACTGAGCCATCGTCTAGTTCTGCTTCATGCACTTTGGCAAGT
AGATTTGGTAACCAGTTATTCTTTTTTGAATTAATCCGCCCCCCTTTTT--------------------GGGTCTTGAGC
CAGTTTCATGTGGATGGCCTCAGTTTTGGTTTGCTGAATTTACACTGTCATGCCATATGCAGTTGCAATTTTCCCTTGTA
AATTTGTAGCTACTTTTCTAGGAATTGAAATTTGATGAAGTACGTTTGCTGCTGAAGCTTTTCTCATTGTCT--------
-CTTCTGCTTCATATTATCTGCAACCCCCTCTTATATCATTCATAACATACATGGTGATTATTTTTGGGATAGTAGCTTC
TAGGCTGCTCTTCCTATCAAGTCTAATGTATCTGTAAACTGTAGTATTGTCGGCATCTTGCTTTGCTCGTGCAGACTTTT
ACGTCACATTTCTCATTGCTGGGTGTCATCCCTTCCTGTTTCTGTGCAGCACGATATTGGACAGGGTAGTGACGGTTGAA
TACGCCTTCCGGGATGATGACAATGAAAGAGATGACAGACATGGCAGTCCCAGGCGAGGCGGTGACAGATACGGCAGCCC
GAGACGAGGGGGTGACAGATATGGCAGTCCCAGACGAGGCGGTGACAGATATGGCAGTCCAAAAAGAGCTGACCAGGGCA
GGCGTCCCTACGTGCGGTCCCCTAGCCCTAGGTACCGAAGGGATTACAGTCCAGATTACGATCGCCGTCCACGTAATTCT
GGGTATGATCGCCGCGATGGAGCACCCTATGGTAGGAGCCGAAGCCCTGTGTATGATCGTTATGAAAGAGGCAGGAGCCC
CGGCTATGGTCGTTATTAG-------------------------------------------------------------
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>chr4B_1_TraesCS4B01G398900
CCAAACAGCTGGATCTGGA-ATCACCATGACAAATGGAGTTACCCTTGGGGATCTGATTACTCTTCCATTAAGATGTACA
AGTTGATCACAATGGGGGACAAAGCAGCACACATCTTTGCAAAGATATGGAAGAATGCTGCAATGCTGAGATATAAAATT
TTCTTC-TGGATGCTCTTACATG-----------ACAGGGAATCTCCTGCATAGGAAACCTTTTCACTTACCATCATACA
AATGTGAGATGTGCCACTCCAATGCTGAAGAAACCTCCCTACACTTATTTTGGGACTGTAACTTTGCCTCAAGTTGTTGG
GAAGCTCTGATTGTTCATAGAAACAGGGGCTTATCACCCTATGTCCAAATTACCCTCTTGGTTAAAGCCCTTCCCACATC
AATTGCCATGGAAATCCTCATCGTGGGATGTTGGAACATCTGGATTCAAAGAAACGGAAAAA-ATTTCAGAGCAAGGCAG
CAGTCCATTCAGGTTTGGAAGTGCTTGCTGAAACATGATCTCCTGCTTCTCAAGCATAGAATCAGGTCCAAGTTTGAAGC
CCAACTTTCTAGCTGGATTGATCGGTTTCTCAATTAAGATCTCTTAAC--ATGTCGGGTTTTGATAGAACATGAGTTGGT
TAACTTGGCCCTCTGTGGCTTGTAATTTTTTGTAAATACTTTTG-CTTTTAT----------TAATATATACCGATTGTT
CTACGGGTTTCGGTTCAAAAAAAGAAAAGACGCCTGAGCTAAAATTGGTCTCTGAACTCGGGCTGATGGTCCATGATGGA
GTGTGTATATAGCAGCTTGCCGTGAAAGCCGGAGCGGACCGAGCAAACTGAACCGAGCCGAGCGGCTGGCTAGGCCCATG
AAGAGCCCACAACGTCCACTTTGTGGGTAGCTTGCTTTTGCTATTGCTAGAGTTAGGGTTCCACTTCCACC--------T
CCCCTCCTCT------------CTCGCCGTCGCCGTCGCCGTCGCCGCCGCACAGCACAGCAGGGACCTCACCGGAGTG-
--------------GGTGAAGGATGAGGCCGGTGTTCTGCGGCAACTTCGACTACGAGACGCGGCAGTCGGATCTGGAGC
GCCTCTTCTCAAAGTACGGACCCATCCGCCGCATCGACATGAAATCCGGTACTCAGCTCTCAGCTCTCATCGTGCTCTGC
TCGTGTA-------------------------------------------------------------------------
-TGCTCTGCTCTGCTCTGCTCGTGTCCCTCAAATAGAAATAGATGATAGATAGAT-------------------------
-----TGCTC----------------------------------------------------------TGCTCTGCTCTA
TGGATGAATGAATGAATGAACGAATG------------------------------------------------------
------------AATGAATGCTCAAAAAAGAAACAACTATCTAAATTTCAATGCAACTGTTTCTACATACTGCAGGCTAC
GCCTTTGTCTACTTCCAAGACGAGCGCGACGCCGAGGATGCAATAAGGCGCCTCAGCAACGCCGAGTTCGGCCAGACCAG
CCGCAGGCTCTCCGTCGAATGGTCAAGGGTAACC----C-TCTTTGTCTCTCTCTCTCTCTTTGTCTGTCGAATGAATGA
CATGTCTTCCTAAATTCAA--ATTCA-------------------TTCCTCCAGCAAGAGGAGCCGGTCCCCAAGAACCG
CGACAGGCCTACAGGGGCAGATGCAAAGCCCACCAGGACGCTCTTTGTTATCAACTTTGACCCCATCCGCACCAAAGTCG
TCGACATCGAGAGGCATTTTGAGCCCTACGGCAAGATTGCAAACATTCGTATCCGCAAGAACTTTGCTTTCGTGCAGTAC
GAGGCGCAGGAGGACGCCAGCGTAGCCGTCAACAAGACCGACAAGAGGTAT----CATCCGCTTCCCACTGCCCATCCTC
CATCCAGTATCAACAAA--------CAATGCTGCAAATCTTGTATGACTGACTGATTAGTTG------------------
-----TTTGCTCTACACTAGAGCCCTGGGCAGGCATGGCATTGCTCTGCTAT-TACTGCAT-------------------
-------------CTAATGATGCACTGATTCTTCGGTCATTTCATTTGGGGTGGGGTCCATAACATCTTCATACTGGATT
CCCTCCCCCC-GACTAGTTAGGTTATTTCGCATTGTGTGCTGAGGTCTCAAATTCTCTGCTACATCATGTGACTGATGCA
ATACCTGACATGGATTTTTAT--GATAGTTGGATGGTCTTTCTTCTTACAATAATTATTATTTTTACATCAATACGAAAG
CAAAACTGTTAGGTAGGCTGCAATTTTTAGGCCCTCAAATATTATCTGCGCGCTTGCTCCACTGAAGCACCGTCAAGTCA
TTAACTCTCCAATGTCGTAGGAAGGCTTGCTCTGCTCCACTGAGCCATCGTCTAGTTCTGCTTCATGCACTTTGGCAAGT
AGATTTGGTAACCAGTTATTCTTTTTTGAATTAATCCGCCCCCCTTTTT--------------------GGGTCTTGAGC
CAGTTTCATGTGGATGGCCTCAGTTTTGGTTTGCTGAATTTACACTGTCATGCCATATGCAGTTGCAATTTTCCCTTGTA
AATTTGTAGCTACTTTTCTAGGAATTGAAATTTGATGAAGTACGTTTGCTGCTGAAGCTTTTCTCATTGTCT--------
-CTTCTGCTTCATATTATCTGCAACCCCCTCTTATATCATTCATAACATACATGGTGATTATTTTTGGGATAGTAGCTTC
TAGGCTGCTCTTCCTATCAAGTCTAATGTATCTGTAAACTGTAGTATTGTCGGCATCTTGCTTTGCTCGTGCAGACTTTT
ACGTCACATTTCTCATTGCTGGGTGTCATCCCTTCCTGTTTCTGTGCAGCACGATATTGGACAGGGTAGTGACGGTTGAA
TACGCCTTCCGGGATGATGACAATGAAAGAGATGACAGACATGGCAGTCCCAGGCGAGGCGGTGACAGATACGGCAGCCC
GAGACGAGGGGGTGACAGATATGGCAGTCCCAGACGAGGCGGTGACAGATATGGCAGTCCAAAAAGAGCTGACCAGGGCA
GGCGTCCCTACGTGCGGTCCCCTAGCCCTAGGTACCGAAGGGATTACAGTCCAGATTACGATCGCCGTCCACGTAATTCT
GGGTATGATCGCCGCGATGGAGCACCCTATGGTAGGAGCCGAAGCCCTGTGTATGATCGTTATGAAAGAGGCAGGAGCCC
CGGCTATGGTCGTTATTAGGTAAGAAGACCCTTCCCCGGACCCTGCGCAAACGGGAGCTACATGCACCGGGCTGCCCCTT
TTTATTATTA------------------------------------------------------------TTTTTTACTA
CGTTTCCTAGCATATCTTTGAAGTGCTTATTCCGTTTGGCGGTGCTACATTTGATTTTCGATCCCATTGGTTGTTGTTGA
CCCACACTTTTCAGGGTGGATTGATTTCCAAGGATCACAAAGGAAGGAATCCCAGGGAGGAAGGAGGATGCATACGCTCA
GACCCTTTTCGGCTGTGTTCTA------------------------------------TTTTTTTTCATAGCAACACCAC
CTTGTGTATTTGAGACGGATAGTTCATATCAGGTGGGATCATCAAGCTGCTGTTTTAAGCGATTGT--------------
----------ACGCGGTTATGCCTCTTAATGGCCTCTTGACAAACTATGACGGTGAATCCCTATGCATTTCCCATCTGAC
TCTTTGGAGAAGTAGTTTGTTTGTTTGTCTGTTTGTTTGTT----GTGATGATCGATCCCTGTATGGTATTGGTATTGGT
ATTGGTATTGGTATTGGTATTGGTATGCCTTCCAGTTGACTGACTATAAAATGTTGTAACG--CCCAAAA-------TAT
GGTTGAGTGGCAATGGTTTTTGTT--------TGTTGTGGTCTGCCATCCATTGCCATTG----------AAAGTTAGCA
TGGCCTGGAGATTTATCCACTCCATCTCCACTTATTTGTTTTCCCAATGACCGATCTTGTTGTAAGTTTCACTGAGAATT
CATTTTCTAGATAAAATTCAGTTAGGT-----------------------------------GGGGAAAAAGAGTTTGCA
TTTCAAAATGGACTGACTGAATTTATGTATCAGTCAGGCCATGCTGCTTACATCTGTCTGCTTGGGACTTTAGAGCATCT
ACAGTCGGACGCCTCAAACGCCCACGCCCGCTTTCTGTGTGTGCCAGTTGTCGCCAACCTTTTCTTTCCTGCT-------
------GCTGCACGCTACCTGTTGGCCTGACAAAGGAAGGAGGGCTTGTGGCCATTCAAAAACAACATGCACTCAAAATT
CATAGTTTAGTTTTGCAA
>chr7B_1
CCAAACAGCTGGATCTGGACATCAACATGACAAATGGAGTTTTCCTTGGGGATTTGATTACTCTTCCATTAAGATGTAGA
AGTTGATCACAATGGGGGATAAAGCACCAAACATCTTTGAAAAGATTTGGAAGAATGCTGCAATGCTGAGATATAAAATT
TTCTTT-TGGATGCTCTTACATGACAAAGTCAACACAAGGAATCTCCTACACAGAAAATCTTTTCACCTACCATCATACA
AATGTGAGCCCTGCCACTCCAATACTGAAGAAACTTCACTACATCTTTTTTGGGACTGTGACTTTGCCTCAAGTTGGTGG
GAAGTTCTCATTGGTCACAGAAACAGAGGTTTATCACCCTATGATGAAGTTAGTCTCTTGGTTAAAGTCCTTCCCACATC
AATTTCCATGGAAATCATCATCATGGGATGTTGGAACATCTGGATTCAAAGAAACGGAAAAA-ATTTCAGAGCTAGGCAG
TAGTCCATTCAGGCTTGGAAGAGACTGCTGAAACATGATCTCCTACTTCTCAAGCATAGAATCAAGTCCAAGTTTGAAGC
CCAACTATCCAGTTGGATTGATCAGTTTCTCAATTAAGATCTCTTAAC--ATGTTGGGTTTTGATAGAACATGAGTTGGT
TAACTTGGTCCTTTGTGGCTTGTAACTTATTGTAAATACTTTTGCTTTT--AT-TA-ATATATACCATAGAACGATTGTT
CTACGGGTTTTGGTTCAAAAAAA---------------------------------------------------------
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>chr5D_5
----ACAACTGGATCTGGAAATTACCATGACAAATGGAGTTACCCATGGGGAGCTGAATACTCCTATATTAAGATGTACA
AGTCGATTGCAATTGGGGATCAAGCACCACCTATCTTTGCAAAGATATGGAAGAATGTTGCAATGCTGAGATATAAGATT
TTTTTTCTGGCTGCTCTTACATGACACAGTCAATACAAGGAATCTCCTTCACAGAAAATCTTTCCATTTACCATCATACA
AATGTGAGCTCTGCCAATCCAATGCTGAAGAAACTTCCCTACACTTATTTTGGGACTGTGACTTTGCCTCAAGTTGTTGG
GAAGCTCTGCTTGGTCACAGAAACAGAGGCATATCACCCTATGAGGAAATTACTCTCTTGGCTCAGGCCCTACCCACATC
AATTGCCATGGAAATCCTCATCATGGGATGTTGGAATATCTGGATTTAGAGAAACGGGGAAA-TTTTCAGAGCACGACAG
CACTCCATTCAGGCTTGGAAAGGCCTGTTGAAACATGATCTTCTACTCCTCAAGCATAGAATCAAGTCCAAGTTTGAAGC
TCAACTCTCCAACTGGATTAATCAGTTCCTAGGTTACAAATTC--ATATAATGTTGGGTTTTGATAGAGCAGGAATTGGT
TGACTTAGTCCTCTATGACTTGTAAACTTCTGTAAATACTTTTA-TTTT--AT-TA-ATACATACCATAGAACGATTATT
CTACAGGTTTCGGTTCAAAAGAAA--------------------------------------------------------
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>chr5B_5
----ACAACTAGATCTGGAAATGACCATGACAAATGGAGTTACCCATGGGGAGCTGAATAGTCCTCTATTAAGATGTACA
AGTCAATTGCAATTCAGGATCAAGTACCACCTATCTTTGCAAAGATATGGAAGAATGCTGCAATGCTGGGATATATGAT-
TTTTTTCTGGCTGCTCTTACATGACAGAGTCAATACAAGGAATCTCCTTCACGGAAAATCTTTCCATTTACCATCATACA
TATGTGAGCTCTACCAATCCAATGCTGAAGAAACTTCCCTACACTTATTTTGGGACTGTGACTTTGCCTCAAGTTATTGG
GAAGCTCTGCTTGGTCACAGAAACAGAGGCATATCACCCTATGAGGAAATTACTCTCTTGGCTCAGGCCCTACCCACATC
AATTGCCATGTAAATCCTCATCATGGGATGTTGGAATATCTAGATTCAGAGAAACGGGAAAA-TTTTCAGAGCACGGCAG
CACTCCATTCAAGATTGGAATGGCCTGTTGAAACATGATCTTCTACTCCTCAAGCATAGAATCAAGTCCAAGTTTGAAGC
TCAACTCTCCAACTGGATTAATCAGTTCCT--------------------------------------------------
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>chr5D_9
--------CTGCATCTGGAAATCACCATGACAAATGGAGCTACCCATGGCGAGCTGAATACTCCTCCATGAAAATGTATG
AGTTGATTGCAATTGGGGTTCAAGCACCACCTATCTTTGCAAAGATATGGAAGAACGCTGCAATGCTGAGATATAAAAT-
ACTCTTCTGGCTGCTCTTACTTGACAGAGTCAATACAAGGAATCTCCTGCACAGAAAATCTTTCCATTTGCCATCATACA
AATGTGAGCTTAGCCACTCCAATGCTGAAGAAACCTCCCTACACTTAATTTGGGACTGTGGCTTTGCCTCAAGTTGTTGG
GAAGCTCTGCTTGGTCACAGAAACAGAGGCATTTCACCTTATGAAGAGATTACACTTTTGGCTCAAGCCCTCCCCAGATC
AATTGCCATGGAAATCCTCATCATGGGATGTTGGAACATCTGGATTCAGAGGAACAGAAAAA-ATTTCAGAGCACGATAG
CATTCTATTCAGGCTTGGAAAGGCCTGTTGAAACATGATCTTTTACTTCTCAAGCATAGAATCAAGTCCAAGTTTGAAGC
TCAACTCTCCAGCTGGATTGATCAGTTCCTAGGATAAAATTCAAAG-C--ATGTTGGGATTTGATAGAGCAGGAATTGGT
TGACTTAGTCCTCTGTGACTTGTAAACTTCTGTAAATACTTTTA-TTTTTAAT-TA-ATTCATACTGTATAATGATTGTT
CTACGGGTTTCGGTTAAAAAA-----------------------------------------------------------
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>chr2B_14
-------------TCTGGAAATCATCGTGACAAATGGAGCTACCCATGGGGAGCTGACTACTCTTCCATTAAAATGTATA
AGTTGGTTGCAATTGGAGAACATGCCCCACCTATCTTTGCAAAGATTTGGAAGAACGCTGCCATGCTGAGGTATAAGAT-
ATTCTTCTGGCTACTCTTACATGACGGAGTTAATACAAGAAATCCCCTGCACAGAAAATCTTTCCATCTACCATCATATA
AATGTGAGCTCTACCACTCCAACGCTAAAGAGACCTCCCTGCACTTATTTTGGGATTGCAACTTTGCCTCAAGTTGTTGG
GAAGCTCTACTTGGCCATAGAAACAAAGGAATATCACCTTATGAAGAGATTACACTTTTGGCTCAAACCCTCCCCGCATC
CATTGCCATGGAGGTCCTCATCATGGGATGTTGGAATATTTGGATTTAGAGGAACGGGAAAA-TCTTCAGAGCACGACAG
CAGTTCATTCAAGCATGGAAAGGTCTGCTGAAACATGATCTCCTACTTCTCAGGCATAGAATCAAATTCAAGTTTGAAGC
TCAATTCTCCAGCTGGATTGATCAGTACTTCAGTTAATCATAC--AAC--ATGTTGGGTTTTGATAGAGCAGGAATTGGT
TTACTTTGTCCTCTGTGTCTTGTAAACTTCTATAAATACTTTAT-TTTT--AA-TCTATTCATACCGTAGAATGATTGTT
CTACGGGTTTCGGTTCAAAAAA----------------------------------------------------------
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>chr4B_15
--------------CTGGAAATCATCGTGACAAATGGAGCTACCCATGGGGAACCGATTACTCTTCCATTAAAATGTACA
AGTTGATTGCACTTGGAGAACCAGCTCCACCTATCTTTGCCAAAATTTGGAAGAACGCTGCCATGCTGAGGTATAAGAT-
ATTCTTCTGGTTGCTCTTACATGACAGAGCTAATACAGGAAATCTCCTGCACAGAAAATCTTTCTATCTCCCATCATATA
AAAGTGAGCTCGGCCACTCTAACACTGAAGAGACCTCCCTGCACTTATTTTGGGATTTTGACTTTGCCTCAAGTTGTTGG
GAAGCTCTACTTGACCACAGAAACAGAGGAATATCACCTTATGAAGAGATTGCACTTTTGGCTCAAGCCCTCCCCGCATC
AATTGCCATGGAGGTCCTCGTCATGGGATGTTGGAACATTTGGATTCAGAGGAATGGGAAAA-AATTCAGAGCACGACAG
CAGTCCATTCAAGAATGGAAAGGCCTTCTCAAACATGATCTTCTACTTCTCAGGCATAGAATCAAATTCAAGTTTGAAGC
TCAACTTTCCAGCTGGATTGAACAGTATTTAAGTTAATTTTAC--AAC--ATGTTGGGATTTGATAGAGAAGGAATTGGT
TGACTTTGTCCTCTGCGACTTGTAAACTTCTGTAAATACTTTAT-TTTT--AAATATATTCATACCGCAGAATGATTGTT
CTATGGGTTTTGGTTCAAAAAA----------------------------------------------------------
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>chr2B_19
A-------------------ATCATCGTGGCAAATGGAGCTACCTGTGGGGAGCTGACTACTCTTCTATT-AAATGTACA
AGTTGATTACAATTGGAGAACATGCCCAACCTATCTTTGCAAAGATTTGGAAGGACGCTGCCATGCTGAGGTATAAGAT-
ATTCTTCTGGTTACTCTTACATGACAGAGTTAATACAAGAAATCTCTTGCACAGTAAATCTTTCCATCCACCATCATATA
AATGTGAACTCTGCCACTCCAATGCTGAAGAGACCTCCCTGCACTTATTTTGGGATTGTGACTTTGCCTCAAGTTGTTGG
GAAGCTCTACTTGGTCACAAAAACAGAGGAATATCACCTTATGAAGAGATTACACTTTTGGCTCAAGCCCTCCCTGCATC
AATTGCCATGGAGGTCCTCATCATGGGATGTTGGAACATTCGGATTCAGAGGAATGGGAAAAATCTTCAGAGCACGATAG
TGCTCCATTCAAGCATGGAAAGGCCTGTTGAAACATGATCTCCTACTTCTCAAGCATAGAATCAAATTCAAGTTTGAAGC
TCAACTCTCCAGCTGGATTGATCAATACTTAAGTTAATTATAC--AAC--ATGTTGGGGTTTGATAGAGCATAAATTGGT
TGAATTGGTCCTTTGTGACTTGTAAACTTCTGTAAATACTTTAT-TTTT--AA-TATATTCATACCGTAGAACGATTGTT
CTATGGGTTTCGGTTAAAAAAA----------------------------------------------------------
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>chrUn_841
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-------------------------------------------------------------------GGCTAGGCCCATG
AAGAGCCCACAACGTTTG-TTTGTGTGTAGCTTTGGTTG---ATTGCTAGAGTTAGGGTTCCACTTCCACC--------T
CCCCTCCTCTCTCTTTCT----CTCGCCCTCGCCCTCGCCGCCGCCGCCGCACCGCACCGCACCGCACAGCAGGGAGGGG
TTC-----------------GGATGAGGCCGGTGTTCTGCGGCAACTTCGACTACGAGACGCGGCAGTCGGACCTGGAGC
GCCTCTTCTCAAAGTACGGGCCCATCCGCCGCATCGACATGAAATCCGGTACTCAGCTCTCAGCTCTCATCCTGCTCTGC
TCCTGTATGCTCTGCTATTATCATGTTCTGTTCTGTGGATTATATCTGGACCTCCCTCCCTCCCTCGTCTAGTGTCCCCC
CTGCTCTGCTCTGCTCTGCTCGTGTCCCCC------AAATAGATGATAGATAGATACTCCTAGACAGTATTCAATTGCTC
TGCTCTGCCC----------------------------------------------------------TGCTCTGCTCTA
TGGATGAATGAATGGATGAATGAATGAATGAATGCTCAAACGCCACATTTGGATAGAATGAGTTTCATGTGGACGGAGGC
AATAAATAAATGAATGAATGCTCAAAAAAGAAACA--------------------------------TACTGCAGGCTAC
GCCTTTGTCTACTTCCAAGACGAGCGCGACGCCGAGGACGCAATAAGGCGCCTCAGCAACGCCGAGTTCGGCCATACCAG
CCGCAGGCTCTCTGTCGAATGGTCAAGGGTAACCTGCTC-TCTCTGTCTCTCTCTCTCTATCTCTCTCTCGCTCTCTCTC
TGTCAAGGGTAACCTAAATTCATTCA-------------------TTCCTCCAGCAAGAGGAGCCGGTGCCCAAGAACCG
CGACAGGCCTACAGGGGCAGATGCAAAGCCCACCAGGACGCTCTTTGTTATCAACTTTGACCCCATCCGCACCAAAGTCG
TCGACATCGAGAGGCATTTTGAGCCCTACGGCAAGATTGCAAACATTCGTATCCGCAAGAACTTTGCTTTCGTGCAGTAC
GAGGCGCAGGAGGACGCCAGCATAGCCGTCAACAAGACCGACAAGAGGTATGTATCATCCGCTTCCCACTGCCCATCCTC
CATCCAGTATCAACAAA--------CAATGCTGCAAATTTTCTATGACTGATTAGTTGTTGCCAAGTGCATTTCCCCGCA
TCCACTTTGCTCTACACTAGAGCCCTGGGCAGGCATGTCATTGCTGCTATTACTACTGCATCCAAAAATGCACTGATTTT
TTTTTGTGGGAAACTAAAAATGCACTGATTCTTCCGTCATTTCATT-----TGGGGTCCATAACATCTTCATACTGGATT
CCCTCCCCCCCGACTAGTTAGGTTATTTCGCAC--TGTGCTGAGGTCTCAAATTCTCTGCTACATCATGTGACTGATGCA
ATACCTGACATTGATTTTTAT--GATAGTTGGATGGTCTTTCTTCTTACTATA---ATTATTTTTACATCAATACGAAAG
CAAAACTGTTAGGTAGGCTGCAATTTTTAGGCCCTCAAATATTATCTGCGTGCTTGCTCCACTGAAGCACCGTCAAGTCA
TTAACTCTCCAATATCGTAGGAATGCTTGCTCTGCTCCACTGAGCCATCGTCTAGTTCTGCTTCATGCACTTTGGCAAGT
AGATTTGGTAACCAGCTATTCTTT-----------------------TTTGAATTAATCCCCCCTTTTTGGGTCTTGAGC
TAGTTTCATGTGGATGGCCTCAGTTTTGGTTTGCTGAATTTACACTGTCATGCCATATGCAGTTGCAATTTTCCCTTGTA
AATTTGTAGCTACTTTTCTAGGAATTGAAATTTGACGAAGTACGTTTGCTGCTGAAGCTTTTCTCATTGTCT--------
-C---------ATATTATCTGCAACCCCCTCTTATATCATTCATAACATACATGGTGACTATTTTTGGGATAGTAGCTTC
TAGGCTGCTCTTCCCATCAAGTCTAATGTATCTGTAAACTGTAATATTGTCGGCATCTTGCTTTGCTCGTGCAGACTTTT
ACGTCACATTTCTCATTGCTGGGTGTCATCCCTTCCTGTTTCTGTGCAGCACGATATTGGACAGGGTAGTGACGGTTGAA
TACGCCTTCCGGGATGATGACAATGAAAGAGATGACAGACATGGCAGTCCCAGGCGAGGCGGTGACAGATACGGCAGCCC
GAGACGAGGGGGTGACAGATATGGCAGTCCCAGACGAGGCGGTGACAGATATAGCAGTCCAAAAAGAGCTGACCAGGGCA
GGCGTCCCTACGTGCGGTCCCCTAGCCCTAGGTACCGAAG---------TCCAGATTACGATCGCCGTCCACGTAATTCT
GGGTATGATGGCCGCGATGGAGCACCCTATGGTAGGAGCCGAAGCCCTGTGTATGATCGTTATGAAAGAGGCAGGAGCCC
CGGCTATGGTCGTTATTAGGTAAGAATACTGAGTGAGTTTCTGAAAGAAACCA---------------------------
-TTATTATTA------------------------------------------------------------TTTTTTACTA
CCTTTCCTAGCATATCTTTGAAGTGCTTATTCCGTTTGGCGGTGCTACATTTGATTTTCTATCCC---------------
---ACACTTTTCAGGGTGGATCGATTTCGAAGGATCACAAAGGAAGGAATCCCAGGGAGGAAGGAGGATGCATACGCTCA
GACCCTTTTCGGCCGTGTGCTGGAAGAGCGAGGGAAGGGAAGGGCAACGCGATGCTATTTTTTTTTCATATCAACACCAC
CTTGTGTATTTGAGACGAATAGTTCATATCAGGTGGGATCACGA------TGTTTTAAGCGATTGTTGGTCAAACTGATA
TGGATGATGTACGCTGTTAC-----------GCCTCTTGACAAACTAGGACGGTGAATCCCTCTGCATTTCCCACCTGAC
ACTTTGGAGAAGTAGTTTGTT--------TGTTTGTTTGTT----GTGATGATCGAGCCCTGTATGGT------------
----------------------------------GTTGATTGACAATAAGATGTTAGTAAC--CCAAAATATGTATGTAT
GGTTGAGTGGCAATGGTTTTTGTTGCTATGTTTGTTGTGATCTGCCATCCATTGCCATTGGTTAATAATGAAAG------
---------------------------CCACTTATTTGTTTTCCCAATGACCGATCTTGTTGTAAGTTTCACTGATAATT
CATTTTCTAGATAAAAATCAGTTAGGTTTTTTTTTGAGAAGAAGATAAAAATCAGTTAGGTGGGGGAAAAAGAGTTTGCA
TTTCGAAAGGGACTGACTGAATTTATCTATCAGGCAGGCC-----------------------------TTAGAGCATCT
ACAGCCGGACGCCCGGCCTT---------------TGTGTGCGCCATTTGTCACCGACCTTTTCTTTTCTGCCCCAAGGT
CCTGCCGCTGCACGCTACCTGTTGGCCTGACAAAGGAGGGAGGTCTCCATC-----CAAAAACAACATGCACTCAAAATT
CATAGTTTAGTTTTGCAA
>chr5A_890
TTTGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTGCTAGAGTTAGGGTTCCACTTCCACCGCACCACCT
CCCCTCCTCTCTCGCCCTCGCCCTCGCCCTCGCCGTCGCCGCCGCCGCCGCACAGCACAGCACAGCACAGCACAGCAGGG
GGGGTTTGTTGGGTGGTGAAGGATGAGGCCGGTGTTCTGCGGCAACTTCGACTACGAGACGCGGCAATCGGACCTGGAGC
GCCTCTTCTCAAAGTACGGACCCATCCGCCGCATCGACATGAAATCCGGTACGATTCTCCCTCCCCTGCCTGCCTGCCC-
--------------------------TCTGCTCTGTGGATTATCACGTCATAAAATCTT-------------------CC
CTGCTCTGCTCTGCTCTGCTCGTGTCCATAGATGA--------------------------------TATTCAATTGCTC
TGCTCTGCTCTGCTCGTGTCCATAGATGATATTCAATTGCTCTGCTCTGTGTACTACCTACACTAGTATGCTCTGCTCTA
TGGATGAATGGATGAATGGATGAATGTTTCTACTGC--------------------------------------------
---------------------------------------------------------------------CTGCAGGCTAC
GCCTTTGTCTACTTCCAAGACGAGCGCGATGCGGAGGATGCTATAAGGCGCCTTAGCAACGCCGAGTTTGGCCATACCAG
CCGCAGGCTCTCCGTCGAATGGTCAAGGGTAACCTGCTCTTCTCTGTCTGTCTCTCTCTCTGTACCCTGATGATTTCGTT
CGTGCTACAAGCAGACTCTTCTCCTCCTCTCATGCATGTCTCCCTTTCCTCCAGCAAGAGGAGCCGGTGCCCAAGAACCG
CGACAGGCCTACAGGGGCTGATGCAAAGCCCACCAGGACGCTCTTTGTTATCAACTTTGACCCCATCCGCACCAAAGTCG
TTGATATCGAGAGGCATTTTGAGCCCTACGGCAAGATTGCAAACATTCGTATCCGCAAGAACTTTGCTTTCGTGCAGTAC
GAGGCGCAGGAGGACGCCAGCGTAGCCGTCAACAAGACCGACAAGAGGT------------------ACTGCCCATCCTC
CATCCAGTATCAACAAATCAACAAACAATGCTGCAAATCTTGTATGACTCTTTACTTGTTGCCAAGTGCATT--------
TCCACTTTGCTCTACACTAGAGCCCTGGGCAGGCATGGCATTGCTGCTATTACTACTGCAT-------------------
-------------CTAACAATGCACTGATTCTTCCGTCATTTCATT-----TGGGGTCCATAACATCTTCATACTGGATT
CCCTCCCCCCCGACTAGTTAGGTTATTTCGCAC--TGTGCTGAGGTCTCAAATTCTCTGCTACATCATGTGACTGATGCA
ATACCTGACATGCATTTTCATATGATAATTGGATGGGCTTTGTTCTTACAATA---ATTATTTTTACATCAATACGAAAG
CAAAACTGTTAGGTAGGCTGCAATTTTTAGGCCCTCAAATATTATCTGCGCGCTTGCTCCACTGAAGCACCGTCAAGTCA
TTAACTCTCCAATATCGTAGGAATGCTTGCTCTGCTCCACTGACCCATCGTCTAGTTCTGCTTCATGCACTTTGGCAAGT
AGATTTGGTAACCAGTTATTCTTT-----------------------TT--------------------GGGTCTTGAGC
TAGTTTCATGTGGATGGCCTCAGTTTTGGTTTGCTGAATTTGCACTGTCATGCCACATGCAGTTGCAATTTCCCCTTGTA
AATTTGTAGCTACTTTTCTAGGAATTGAAATTTGACCAAGTACGTTTGCTGCTGAAGCTTTTCTCATTGTCTATTCTGCT
TC---------ATATTATCTGCAACCCCCTCTTATATCATTCATAACATACATGGTGATTATTTTTGGGATAGTAGCTTC
TAGGCTGTTCTTCCCATCAAGTCTGATGTATCTGTAAACTGTAATATTGTCGGCATCTTGCTTTGCTCGTGCAGACTTTT
ACGTCACATTTCTCATTGCTGGGTGTCATCCCTTCCTGTTTCTGTGCAGCACGATATTGGACAGGGTAGTGACGGTTGAA
TACGCCTTCCGGGATGATGACAATGAAAGAGATGACAGACATGGCAGTCCCAGGCGAGGCGGTGACAGATACGGCAGCCC
GAGACGAGGGGGTGACAGATATGGCAGTCCCAGACGAGGCGGTGACAGATATGGCAGTCCAAAAAGAGCTGACCAGGGCA
GGCGTCCCTACGTGCGCTCCCCTAGCCCTAGGTACCGAAG---------TCCAGATTACGATCGCCGTCCACGTAATTCT
GGGTATGATCGCCGCGATGGAGCACCCTATGGTAGGAGCCGAAGCCCTGTGTATGATCATTATGAAAGAGGCAGGAGCCC
CGGCTATGGTCGTTATTAGGTAAGAATACTGAGTGAGTTTCTGAAAGAAACCA---------------------------
-TTATTATTATTATTGTTATTATTATTATTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGTTTTTTACTA
CCTTTCCTAGCATATCTTTGAAGTGCTTATTCCGTTTGGCGGTGCTACATTTGATTTTCTATCCCGTTGGATGTTGTTGA
CCCACACTTTTCAGGGTGGATTGATTTCGAAGGATCACAAAGGAAGGAATCCCAGGGAGGAAGGAGGGTGCATACGCTCA
GACCCTTTTTGTCCGTGTGCTAGAAGAGCGAGGGAAGTGAAGGGCAATGCGATGCTA--TTTTTTTCATATCAACACCAC
CTTGTGTATTTGAGACGAATAGTTGATATCAGGTGGGATCAAGA------TGTTTTAAGCGATTGTTGGTCGAACTGGCA
TGGATGATGTACGCGGTTACGCCTCTTAATGGCCTCTTGACAAACTAATG-----------------------ACCTGAC
ACTTTGGAGAAGTAGTTTGTT--------TGTTTGTTTGTTTGTTGTGATGATGGATCCCTGTATGGTATTGGTT-----
-------------TTGGTATTGGTATGCCTTCCAGTTGATTGACAATAAGATGTTAGTAACGCCCAAAATATGTATGTAT
TGGTTTTTGTTGCTATG-TTTGTT--------TGTTGTGGTCTGCCATCCATTTCCATTGGCTAATAATGAAAGTTAGCA
TGGCCTGGAG-----------------------ATTTGTTTTCCCAATGACCGATC------------------ATAATT
CATTTTCTAGATAAAATTCAGTTAGGT-----------------------------------GGGGAAAAAGAAAAAGG-
--------------GACTGAATTTATGTATCAGGCAGGCCATGCTGCTTACTCCTGTCTGCTCGGGAACTTAGAACATCT
ACAGCCGGACGACTCAAATC-------------------TGCGCCATTTGTCGCCAACCCTTTCTCCCCCAAGGTCCGC-
CCTGTCGCTGCACGCGAGGGAGGCCTGTGTGGTGGGTGTGGC--CTCCATC-----CAAACACAACATGCACTCAAAATT
CATAGTTTACTTTTGCAA
>SNPs
--------------------------------------------------------------------------------
-------------------S------S-----------------------------------------------------
-----S---------------------------------------------S--S---S---------------------
--------S-S---------------------------------------------------------------------
-------------S------------S----------------SSS-------S--------------------------
----------------------S---------------------------------------------------------
-------------S-------S--S-------------------S-------------------S---------------
---------S-------------S------------------------------S-------------------------
--------S----------------S-------------------S-----S------------S------S--------
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
---------------SSSS------S-------SSS--SSSS--------------------------------------
----------------------------S------------S--------------------SS-SS-SSSS-----S--
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
------------------------------S-SS-S--------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
--------------------------------------------------------------------------S-----
-------------------------------------------S-----------------S-S---S---S--SSSSSS
-S--SSSSSSS--S-SS-S-------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-SS--SS-SS------------------
---------------------------------------------SSSS-SS----------------------------
-----------------SS---------------S-----------SSSSS-----------------------------
--------------------------------SSS---------------------------------------------
-----------------------------------------------------SSS------------------------
--------------------------------------------------------------------------------
-------------S---------S--------------------------------------------------------
------------------------SSSSSSSSSSSSSSSSSSSSSSS---------------------------------
S-------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--SSSSSSSSS---------------------------------------------------------------------
--------------S----------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------SSSSSSSSS-------------------------------
--------------------------------------------------------------------------------
--------------------------S--SSSSSSSSSSS-SSSSS-S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-------------------------------------------------------------------------------
-S---------------------------------------------------------S-----S----S---------
----------------------------S---------------------------------------------------
-------------S----S---------------------------------------------------S---------
-----------------S-----------------------SS-SSSSSS------------------------------
-------------------S---------------------------S--------------S-----------S-----
S--------------------SSSSSSSS---------------------------------------------SSSSSS
SSSSSSSSSSSSS--------------------------S----S----S-----SSS-SS----S---S----------
--------------------------------------------------------------------------------
----------SSSSSSSSSSSSSSSSS------------------------------------------------S----
--------------------------------------------------------------------------------
----S---S------------------------S-----------------SS---------S----SS-----------
----S-------------SSSSSSSSSSSSSSSSS------S----S-------------------------S-------
-------------------------------------S-----S--SSSSSSSSSS------------------------
------------------
>forward_789
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CTCTGAACTCGGGCTGATGG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------
>reverse_2288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GGGGTGGGGTCCATAACATC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_1313
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTCTGCTCGTGTCCCTCAAA-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_3328
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------AGTCCAGATTACGATCGCCG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------
>forward_2975
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GCTTC
TAGGCTGCTCTTCCT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_4434
--------------------------------------------------------------------------------
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---------------------------------TCAGGCCATGCTGCTTACAT---------------------------
--------------------------------------------------------------------------------
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------------------
