>input_sequence_38822
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
TGGATACTACAGCAAGCAACGCCGTGCTGGTTATAGAATTCCAGAACATAGTGAATGATGTTGCTGCCCCGCGTTCTCCT
TCGCCGGATCCAGAAGCTGAACTTATGAAGCGCCATTTCTCTAGAGAAGAAGCCGTAGGGAAATTCCCCCTAACCGCGAT
CCCATCCATTCTCCTCCATGTGCTCTCATCCTCTGACCTGGATCCTAAAGATCTTGCTGCTTTGGAGGCAAGTTGTACAA
TCACATTCTTAGTTCTCACGACTTTTGGGTTTTAAAATGCTGCTTATGAATTATTGTGACGACACAATGATGTGGAGATA
AATGATGTGGAGATATTGTGC---------------------------TCCCACCAGACTTGGAATTATCACTTCCAGAA
CTTGCAGCACTCGATATGTGCCAGCAAAGGCCCATGTTTAACCTAATGAAACCAGAAGAGAAGGAGTGGCTGAAGCAACG
GTGTGGGGGCTCTTGGAAGCTTGTTCTTGGATACATTTTGGTCGGCGAGAAGAATTGCCGCCGCGGGAAATCTCAGGTCA
CTGCTGGACCAGGCCACAGCATTGTTGTCACCGCAAGTGGGGCCGTATACTCATTTGGCATGAATTCCTCGGGCCAGCTT
GGCCTTAGGGACACAGAAGACAAGTTCAAGCCATGCCTTATCAGGTA-GAGCACGTTGATTTGGTTGAATT-TGGGAATC
TTGTCTGCCGATGAAACAAACTGTTGCTGCATGTGTAGGTCTCTGCAAGGCATCAGGATCACGCATGCCGCGGTTGGATC
GAGTCGAACAATGCTTGTGAGCGACACGGGAAGTGTCTATGTATTTGGAATCGACACCTTTGGGGG-TATAGTTTGAATG
GAATACCTGCTACTGACTACGTTAACAGTCCCAAGGTAGTGGAGTCACTCAAGGGCATCTTTGTAGTGCAAGCAACCATA
GGAGGCCTCTTCTCGGCGGTTCTGTCGAGAGAGGGTCGGGTTTATACTTTCTCCTGGGGCCACGAGGAGAGGCTAGGCCA
TAATACAGATTACGCCGATGTCGAGCCTCGTCTTCTCTCTGGGCCCCTTGAGAATGTACTTGTTGCGCAGATTGCTGCCG
GCAATTGTTACCTCCTTATGTTAGCCTACCAGCCCACCGGAATGTAAGCATTTGCTCCTATGGTCTCTATGCTTTTCTTA
TCCAATTGCATGCATGTCCATTCAAATAATTGAACAACCATTCTTGATGTCTCTTATATTCGCTATATATGCAGGTCGGT
GTACTCTGTGGGCTGTGGTCAAGGAGGCAAGCTTGGGCATGGGAACAAGAACAGCGAGGGCGTCCCTCAGCTGATCGCAC
ACTTTGCGGGAATCGACGCAAGGCCAGTGTCAATCTCAGCCGGTGCTTGGCACGCCGCGGTCCTGAGCAGCGACGGGCGC
GTGCTCACCTGGG-ATGGGGGGTCCAAGGCTGCCTAGGACATGGATACGCCGAAGAATGCGCGACCCTCCCGATGGCGGT
GGAAATCTCCAATGCTGTCCACGTTTCAGCTGGCCAGTACTGCACCTTTGTCATGACGGATAATGGTGATGTCTACTCCT
TTGGGTGGAAGGGGTACTACAACCTAGGCTTGCAGGTGCGATGAATGAATCATGTGAACTTGTACTCCCTCCGTAAAGAA
ATATAAGAGCGTTTAGATCACTAAGTAGTGATCTAAACGCTCTTATATTTCTTTATAGAGGGAGTAGAACCCAACTATTC
ATC-TTGTCAAAGTACTCAAATGTAGATGTGATCGCTCTTGGTTTCAGGACGAGGACGAGGACGAGAACCAGGGTGTCCT
GGCTCCCAAGTTGGTCGCCTCACTCACCGGGCTAAACAAAAGGTTTGTGCAGATCAGCCCGACGAATGCCTATGATTGGC
ACAACAGAAGAACGGGGGTGTCTCATACGGTTGCCCTCACCGAATCCGGAAAGGTGTACGCATTTGGAGGAGGTGGCTCG
GGTCAGCTTGGCCTCAAGCTTGCCGAGGGCAAAGAAGCCATGCCCCCTCTCCAGGTTGACATCGATCTCGCCTAG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr2D_1_TraesCS2D01G340500
CCCTGACCTTGTAATCTGTTCAGGTATCTTGTCCGGAGTC--TTTTAGGGTGGAGTCCGTGGGATTCGGAAGGTTTGGCC
ATTTGGTAGAT-GGGGTGGTTATCAGATCAGTTTCGGTCCATTGTCTTCGTATAGGGTTTTCCATGTACAAAAACAGAAG
ATCCTTCCTTTTCTACCCT------TTCCGCATTAGTTTC--TTCATCAGTTCTTGGTT--GGTGATTGCGGCCGCAGTG
TGGAGTTGGGGGTTTTTAGGCGATGGATGTCGGTACTGCAGTACAGATGGTGGATGCCTCCACTTTTTTATCTT-GACCT
TGATTGGATTGTGATTGACGAACATGGATCGTC---------TTTTTTTTTTTGCTTTGTTCCTTGGTTGGTTGAGTTTG
TAGTCCACTATGATGCTGCTGACGGATCCTTGATCGGGGATGCATCTATATAATTGATTAGTTGACTGGTCACGTTGGCA
GTGACTGATGTCACTGATCACAGATGATCAGTTCACCTTGTTAGGGTCTATGGTGTTTCACCTAGTGCATTGGATTCTGA
TGCTAGTATGCGATGCTATGACCATAGACCTGTAAGATCAGAGG--TGTGTGTGGGTCCGTCGTAACCAATTTCATATTC
AGAATGGCTC-AACTTAGGATCACATATTCACATCTCTCCAG---TCATGCTCTATGATCATCATGTTATTACCCTTATT
ATTATGTCTTCAAGATTGAAGTTGCAGCATGAGTTACATTAGCAT---GTATATAATTGGTTACTGTTTTGTACTCTTAA
CATAATATACAATATATGATTTGACTGATT-GCCTTCTCTACAAGAATGTTCATGTTTTGAATTAA-----AAAAAAAGC
AATGCATGGCTTAGTTACTTTCTCTACAAGAATGCAGTTGCCTTGTTTGCAAGGACACTAGGTTTATACATTTATAGCCA
ATTGACAACTCAGTATGTATGGTTTACTAAAAATATATATAC-TTTTTCTCTCAATAGCTGCAGATCATGGAGTGCCCAA
TGGATACTACAGCAAGCAACGCCGTGCTGGTTATAGAATTCCAGAACATAGTGAATGATGTTGCTGCCCCGCGTTCTCCT
TCGCCGGATCCAGAAGCTGAACTTATGAAGCGCCATTTCTCTAGAGAAGAAGCCGTAGGGAAATTCCCCCTAACCGCGAT
CCCATCCATTCTCCTCCATGTGCTCTCATCCTCTGACCTGGATCCTAAAGATCTTGCTGCTTTGGAGGCAAGTTGTACAA
TCACATTCTTAGTTCTCACGACTTTTGGGTTTTAAAATGCTGCTTATGAATTATTGTGACGACACAATGATGTGGAGATA
AATGATGTGGAGATATTGTGC---------------------------TCCCACCAGACTTGGAATTATCACTTCCAGAA
CTTGCAGCACTCGATATGTGCCAGCAAAGGCCCATGTTTAACCTAATGAAACCAGAAGAGAAGGAGTGGCTGAAGCAACG
GTGTGGGGGCTCTTGGAAGCTTGTTCTTGGATACATTTTGGTCGGCGAGAAGAATTGCCGCCGCGGGAAATCTCAGGTCA
CTGCTGGACCAGGCCACAGCATTGTTGTCACCGCAAGTGGGGCCGTATACTCATTTGGCATGAATTCCTCGGGCCAGCTT
GGCCTTAGGGACACAGAAGACAAGTTCAAGCCATGCCTTATCAGGTA-GAGCACGTTGATTTGGTTGAATT-TGGGAATC
TTGTCTGCCGATGAAACAAACTGTTGCTGCATGTGTAGGTCTCTGCAAGGCATCAGGATCACGCATGCCGCGGTTGGATC
GAGTCGAACAATGCTTGTGAGCGACACGGGAAGTGTCTATGTATTTGGAATCGACACCTTTGGGGG-TATAGTTTGAATG
GAATACCTGCTACTGACTACGTTAACAGTCCCAAGGTAGTGGAGTCACTCAAGGGCATCTTTGTAGTGCAAGCAACCATA
GGAGGCCTCTTCTCGGCGGTTCTGTCGAGAGAGGGTCGGGTTTATACTTTCTCCTGGGGCCACGAGGAGAGGCTAGGCCA
TAATACAGATTACGCCGATGTCGAGCCTCGTCTTCTCTCTGGGCCCCTTGAGAATGTACTTGTTGCGCAGATTGCTGCCG
GCAATTGTTACCTCCTTATGTTAGCCTACCAGCCCACCGGAATGTAAGCATTTGCTCCTATGGTCTCTATGCTTTTCTTA
TCCAATTGCATGCATGTCCATTCAAATAATTGAACAACCATTCTTGATGTCTCTTATATTCGCTATATATGCAGGTCGGT
GTACTCTGTGGGCTGTGGTCAAGGAGGCAAGCTTGGGCATGGGAACAAGAACAGCGAGGGCGTCCCTCAGCTGATCGCAC
ACTTTGCGGGAATCGACGCAAGGCCAGTGTCAATCTCAGCCGGTGCTTGGCACGCCGCGGTCCTGAGCAGCGACGGGCGC
GTGCTCACCTGGG-ATGGGGGGTCCAAGGCTGCCTAGGACATGGATACGCCGAAGAATGCGCGACCCTCCCGATGGCGGT
GGAAATCTCCAATGCTGTCCACGTTTCAGCTGGCCAGTACTGCACCTTTGTCATGACGGATAATGGTGATGTCTACTCCT
TTGGGTGGAAGGGGTACTACAACCTAGGCTTGCAGGTGCGATGAATGAATCATGTGAACTTGTACTCCCTCCGTAAAGAA
ATATAAGAGCGTTTAGATCACTAAGTAGTGATCTAAACGCTCTTATATTTCTTTATAGAGGGAGTAGAACCCAACTATTC
ATC-TTGTCAAAGTACTCAAATGTAGATGTGATCGCTCTTGGTTTCAGGACGAGGACGAGGACGAGAACCAGGGTGTCCT
GGCTCCCAAGTTGGTCGCCTCACTCACCGGGCTAAACAAAAGGTTTGTGCAGATCAGCCCGACGAATGCCTATGATTGGC
ACAACAGAAGAACGGGGGTGTCTCATACGGTTGCCCTCACCGAATCCGGAAAGGTGTACGCATTTGGAGGAGGTGGCTCG
GGTCAGCTTGGCCTCAAGCTTGCCGAGGGCAAAGAAGCCATGCCCCCTCTCCAGGTTGACATCGATCTCGCCTAGTTCCT
CCAGCAGCATCTGCCTGGAACACCTTCATACTGTACAGGGAGAAAGAAAGAAACCCCCTCTTTTTTAGATCGTAAATTTA
GTTCGTTCTAGTGTTTTGACCCTTGGTTGGTTACTTTTGAGTAGTGGACAGATATATGATGATGCCATGAGTTATGGGCT
TTAAACTGAACCGAAATCTCAACTGCTTAGCTCTTCATTCTTCATACTCTTTTTTTT-AAACGAAGGCAAAAAATTTGCC
ACATCCATCAATTAAAAGAAGGAAAAGAGTTTGTTACATAGTCTCCCATTACAGT--AAAGGTCGTTACTCTTCAAATGC
CTAATATGCAGTTTGGAGCCATTCCTGGATCATATCCCAAAGACGGAGCATGAACCGGTACTTGAAGAAAAGGTGGTCAA
CGCTTTTGATCTCACACTTACAAAGCGGACAGAAACCGCAAGTTGGCCACCCTTGCTTGGCTAGTCTGTCGCCGCTCCAA
ATGCAATTTTGAATGGACAAACGAGCAAAAAAATCAGTTAGGGGGCACCCAAGCCTTCCACACCGCAGCAGTCATGACAA
ATCTGATGGCATAAGGAATTGCGCCTTATATAAGCGGAGGCCGCCGAGTAATGCCCGGAAGTCGTATGCTTTCAAGTGAT
GTCATCCTCAGTGTGAGTGTTAAGATGGACGTCAACACAAGATATCCCAAAGAGGAATGACCTAACAAATGTTGTCGAAG
GACCAATGCGACGGGAGTTTAATTTTTGATAGCCCCCTCATCCTCCATGGCCTCATGCGCCTTGCACTTCCTGGTGGAGG
CCTCATAAACAAACAGGGCAATGTTGGTTGGCATTGAGCCAAGGGGAGCCCCAAAACAGAGCCCGAGCCCCATTGCCGAT
GGTGATAACAGTGGAAGCATAGAATAAATCAAGGTCTGTCTCGTCGCAAGGGTTGCCCGAATTGCCCATGCCCACCCACA
TTTTTACAGGCTCTTTCCATTCGTATCATGGCAAGGGC
>chr2A_1
CCCTGACCTTGTAATCTGTTCAGGTATCTCCGTCCGGTGTCTTTTTGGGGTGGAGTTCGTGGGATTCGGAAGGTCTGG--
------TAGAT-GGGGTGGTTATCAGATCAGTTTCGGTCCAGTGTCTTCGTGTAGGAAAGGG------CAGAAAAGGAAG
GATCTTCCGTTTTTGTCCATGAAAAATCCGCATTAGTTTTTGTTCGTTAGTTCTTGGTTGGGGCGACTGCGGCCGCAGTG
TGGAGAATCGGGGTTTTACGCGATGGATGTCGGTACTGCAGCACAGATGGTGGAGGCCTCCACTTTGTGATCTTCGACCT
TGATTGGATTGTGTTTGACGAACATGGATCATC---------TT--TTTTTTGGCA-TGTTCCTTGGTTGGTTGAGTGCG
TTCTCCACTATGATGCTGCTGACTGATCCTTGATCAGGGATGCATCTATATAATTGATTGCT------------------
--------------------------------------------------------------------------------
------------------TGACCACAGACCTGTAAGATCAGAGG--TGTGTG--GGTCCGTCGTAACCAATTTCATCTCC
AGAATTGCTT-GACTTAGGG--------TCACATCTCTCCATTCATCATGCTATATGATCATCATGTAATTATTATA---
---ATGTCTTCAATACTGAAGTTGCAGCATGAGTTACATTACCATGTACTATATAATTGGTTACTGTTTTGTACTCTTAA
CAAAATATACAATGTATGATCTGACTGATT-GCCTTCTCTACAAGAATGTTCATGTTTTGAAAAAAAAATTAAAAAAAGC
AATGCATGGCTTAGTTACTTTCTCTACAAGAATGGGGTTGCCTTGTTTGCAAGGACCCTGGGTTCATACATTTATAGTCA
TTTGACAACTCAGTATGTACAATTTACTAAATATATATATAC-TTTTTCTCTCAATAGTTGCAGATCATGGAGTGCCCAA
TGGATACTACAGCAAGCAACGCCGCGCTGGTGCCCCG------CAACATAGTGAATGATGCTGCTGCCCCGCGTTCTCCT
TCGCCGGATCCAGAAGCTGAACTTATGAAGCGCCATTTCTCTGGAGAAGAAGCCGAAGGGCAATTCCCCCTGACCGCGAG
CCCATCCATTCTCCTCCACGTGCTCTCATCCTCTGGGCTGGATCCTAAAGATCTTGCTGCTTTGGAGGCAAGTTCTACAA
TTACATTCTTAGTTCTCACGACTTTTGAGTCTTAAAATGCTGGTTATGAATTATTGTGATGACACAATGATGTGGAGATG
TTTTGCTGTTTCAGGCTACATGTAAATTCTTCAGAAATCCCGCAAAATTCCCACCAGACTTGCAATTACCACTTCCGGAA
CTTGCAGCATTCGACATGTGCCAGCAAAGGGCCATGTTTAAGCCGATGAAACCAGAAGAGAAGGAGTGGCTGAAGCAAAG
GTGCGGGGGCTCTTGGAAGCTTGTTCTTGGATACATTTTGGTCGGCGAGAAGAATTGCCGCCGCGGGAAATCTCAGGTCA
CTGCTGGACCAGGCCACAGCATTGTGGTCACCGCAAGTGGGGCCGTATACTCATTTGGCATGAATTCCTCGGGCCAGCTA
GGCCTTGGGGACACAGAAGACAAGTTCAAGCCATGCCTTATCAGGTAAGAGTACGTTGATTTGGTTGAATTTTGGGAATC
TTGTCTGCCGATGTAACAAACTGTTGCTGCATTTGTAGGTCTCTGCAAGGCATCAGGATCACGCATGCCGCGGTTGGATC
GAGTCGAACAATGCTCGTGAGCGACACGGGAAGTGTCTACGTATTTGGAATCGACACCTTTGGGGGGTATAGTTTGAATG
GAGCACTTGCTACTGACTACGTTAACA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr2B_3
--CTGACCTTGCAATCTATTCAGGTATCTCCGTCCGGGGTCTTTTTGGGGTGGAGTTCGTGGGATCGGGAAGGTTTGG--
------TAGACGGGGGTGGTTATCAGATCAGTTTCGGTCCATTGTCTTCGTGTAGGGAAGGG------TAGAAAAGGAAG
GATCTTCCGTTTTTGTTCATGAAAATTCCGCGTTAGTTTTTGTTCGTCAGTTCTTGGTT--GGAGACTGCGGGCGCAGTG
TGGAGTTG-GGGGTTTTAGGCGATGGATGTCGGCACTGCAGTACATATG-TGGAGGCCTCCACTTTGTGATCTT-GACCT
TGATCGGATTGTGATTGGCGAACATGTGGATCGTCTGTTTTTTT--TTTTTTTGCT-TGTTCCTTTGTTGGTTGAGTGCG
TAGTACAGTATGCTGCTGCTGACTGATCCTTGATCGGGGATGCATCTATATAATTGATTGGT------------------
--------------------------------------------------------------------------------
------------------TGACCATAGACCTGTAAGATCAGAGGTGTGTGTG--GGTCCGTCGTAACCAATTTCATCTTC
AGAATTGCTCGGACTTAGGA--------TCACATCTCTCCAT---TCATACTCTATGACCATCATGTAATTATTATA---
---ATGTCTTCAATATTGAAGTTGCAGCATGAGTTACATTACCATGTAGTATATAATAGGTTACTGTTTTGTACTATTAA
CAAAATATACAATGTGTGATCTGACTGATTGGCCTTCTCTACAAGAAT----------------------TAAAAAAAAC
AATGCATTGCTTAGTTACTTCCTCTGCAAGAATGGGGTTGCCTTGGTTGCGAGGACCCTGGGTTCATACATTTATAGCCA
TTTGACAACTCAGTATGCACGATTTACTAAAAATACATATACTTTTTTCTCTCAATAGCTGCAGATCATGGAGTGCCCAA
TGGATACTACAGCAAGCAACGCCGCCCTGGTTATAGAATTCCACAACATAGTGAATGATGCTGCTGCCCCGCGTTCTCCC
TCGCCGGATCCAGAAGCTGAACTTATGAAGCGCCATTTCTCTGGAGAAGAAGCCGTAGGGCAATTCCCCCTAACCGCGAG
CCCATCCATTCTCCTCCATGTGCTCTCATCCTCTGACCTGGATCCTAAAGATCTTGCTGCTTTGGAGGCAAGTTGTACAA
TTGCATTCTTAGTTCTCACGACTTTTGAGTCTTAAAATGCTGGTTATGAATTATTGTCATGACACAATGATGTGGAGATG
TTTTGCTGTTTCAGGCTACATGTAAATTCTTCAGAAACCCCGCAAAGTTCCCACCAGACTTGGAATTATCACTTCCAGAA
CTTGCAGCATTCGACATGTGCCAGCATAGGCCCATGTTTAACCTAATGAAACCGGAAGAGAAGGAGTGGCTGAAGCAACG
GTGCGGGGGCTCTTGGAAGCTTGTTCTTGGATACATTTTGGTCGGCGAGAAGAATTGCCGCTGCGGGAAATCTCAGGTCA
ATGCTGGACCAGGCCACAGCATTGTGGTCACCGCAAGTGGGGCCGTATACTCATTTGGCATGAATTCCTCGGGCCAGCTT
GGCCTTGGGGACACAGAAGACAAGTTCAAGCCATGCCTTATCAGGTAAGAGTACATTGATTTGGTTGAATTTTGGGAATC
GTGTCTGCCGATGTAACAAACGGTTGCTGCATTTGTAGGTCTCTGCAAGGCACCAGGATCACGCATGCCGCGGTTGGATC
GAGTCGAACAATGCTTGTGAGGGACACGGGAAGTGTCTACGTATTTGGAATCGACACCTTTGGGGGCTATAGCTTGAATG
GAATGCCTGCTACTGACTACGTTAACAGTCCCAAGGTAGTGGAGTCACTGAAGGGCATCTTTGTAGTGCAAGCAACTATA
GGAGGCTTCTTCTCGGCGGTTCTGTCCAGAGAGGGTCGGGTTTATACTTTCTCCTGGGGCCACGAGGAGAGGCTAGGCCA
TAATACAGATTCCGCCGATGTCGAGCCTCGTCTTCTCTCTGGGCCTCTTGAGAATGTACCTGTTGCGCAGATTGCTGCCG
GCAATTGTTACCTCCTTGTGTTAGCCTACCAGCCCACCGGAATGTAAGCATTTGCTCCTATGGTCTCTATGCTTTTCTTA
TCCAATTGCATGTCCATTCAAAT--ATAATTGAACAACCATTCTTGATGTCTCTTATATTTGCTATATATGCAGGTCGGT
GTACTCTGTGGGCTGTGGTCAAGGAGGCAAGCTTGGGCATGGGGACAAGAACAGCGAGGGCGTCCCTCAGCTGATATCAC
ACTTCGAGGGAATCAACGCAAGGCCAGTGTCAATCTCAGCCGGTGCTTGGCACGCAGCGGTCCTGAGCAGCGACGGCCGC
GTGCTCACCTGGGGATGGGGTTTCCAAGGCTGCCTAGGACATGGATACGCCGAAGAATGCGCGACCCTCCCGATGGCGGT
GGAAATCTCCAATGCTGTCCACGTTTCAGCTGGCCAGTACTGCACCTTTGTCATGACGGATAATGGTGATGTCTACTCCT
TTGGGTGGAAGGGAGCCTACAACCTAGGCTTGCAGGTGCGACGAATGAATCGTGTAAACTG-------------------
---------------------------------------------------------------GTAGCACCCAACTATTC
ATTTTTGCCAAAGTACTGAAATGTATATGTGATCGCTCTTGGTTTCAGGACGAGGACGAGGAGGAGAATCAGGGTGTCCT
GTCTCCCAAGTTGGTCGCCTCACTCACCGGGCTAAACGAAAGGTTTGTGCAGATCAGCCCGACGAATGCCTATGATTGGC
ACAACAGAAGTACAGGGGTGTCTCATACGGTTGCCCTCACCGAATCCGGCAAGGTGTACGCGTTTGGAGGAGGTGGCTCG
GGTCAGCTTGGCATCAAGCTTGCCGAGGGCAAAGAAGCCATGCCCCCTCTCCAGGTTGACGTCGATCTCGCCTAGTTCCT
CCTGCATCTGCCTGAAA------CTTCATACTGTATAGGGAGAGAAAGAAAAAACCCT--TTTTTTAGATCGTAAATTTA
GTTAAGTGTTTG-----GACCCTTGGTTGGTTACTTTTGAGTAGCGGACAGATATGCGATGATGCCATGAATTATGGGTT
TTAAACTGAACCGAAATCTCAACTGCTTAGCTCTTCATTCTTCATACACTTTTTTTTAAAACGAAGGCAAAAAATTTGCC
TCATCCATCAATTAAAAGAAGGAAAAGAGTTTGTTACATAGTCTCCCATTACAGTAAAAAGGTCGTTACTCTTCAAATGC
CTAATATGCAGTTGGG-GCCATTCCTGGATCATATCCCAAAGATGGAGCATGAACCGGCACTTGAAGAAAAGATGGTCAA
CGCTTTTGATCTCACGCTTGCAAAGCGGACAGAAATCGCAATTTAGCCACCCTTGCTTGGCCAGTCTGTCGCCGGTCCAA
ATGCGATTTTGGATGGACAAACGAGCAAAAAAATCAGTTAGGGAGCACCCAAGCCTTCCACACCGCAGCAGTCATGACAG
ATCTGATGGCATAAGGAA-TGCGCCTTATATAAGCGGAGGCCGCCGAGTAATGCCCGAAAGTCGTATGCTTCCAAGTGAT
GTCATCCTCAGTGTGAGTGTTAAGATGGACGTCAACACAAAATATCACAAAGAGGAATGACCTAACAAATGTTGTCGAAG
GACCAATGTGACGGGAG-TTAATTTTTGATAGCCCCCTCATCCTCCATGGCCTCATGCGCCTTGCACTTCCTAGTGGAGG
CCTCATAAACAAACAGGGCAATGTTGGTTGGCATTGAGCCAAGGGGAGCCCCAAAACAGAGCCCGAGCCCCATTGCCGAT
GGTGATGACGGTGGAAGCATAGAATAAATCAAGGTCCGTCTGGTCGCAAGGGTTGCCCGAATTGCCCATGCCCACCCACA
TTTTTACAGGCTCTTTCCATTCGTATCATGGCAAGGGC
>SNPs
-----------------------------SSSS-S-S-SS------S---------S---------------------SS
SSSSSS---------------------------------------------S-----SSSSSSSSSSS--S---SS----
SSS-----S---S-SS--S--------------------S-----S-----------------S--S-------------
--------S---S-----------------------------------------S-----------S-S-----------
------------------------------S-------------SS----------S--------------------SS-
-----------------------S-----------------------------------S--SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS----------------------------------SS----------------------S---
-----S-----S--------SSSSSSSS-------------S-------------------------S----SSS-SSSS
SSS----------S---------------------------S--------------------------------------
--S----------S------S-----------------------------------------SS----------------
----------------------------------SS--------------------S--S----S---------------
S------------------S-S----------------------------------------------------------
------------------------S------------------S----------------S-------------------
------------------------------------------S-----------------S------------------S
--------------------------------------------------------------------------------
-S-------------------------S--S-----------S----------------S-------------------S
SS-SSSSSSSSS-SSS-SSSS-----------------------------------------------------------
---------S----S-----------------------------------------------------------------
---S----------------------------------------------------------------------------
-------------------------S------------------------------------------------------
------S--------------------------------------------S----------------------------
-------------S------------------S-----------------------------------------------
---------------------------------------S----------------------------------------
-------------------------------------------------S--------------------------S---
------S-------------------S-----------------------------------------------------
-----------S---------------------------------S-------------S--------------------
-----------------S--------------------------------------------------------------
------------SSSS-S--SSSSS-----------------------------------S-------------------
-------------------------------------------S-------------------------------SS---
----S-S-------S----------------------------------------S--------------------S---
--------------------SS----------------------------------------------------------
--------------------------------------------------------------------------------
-------------SSS-------------------------S---------S---S----SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------------
--S----S---------S-------S------------------------------------S-----S-----------
-S-----------------------------------S------------------------------------------
----------S--S-----------------------------------S-----------S------------------
------------S-----------------------------------------------S-------------------
--S---S-SS-SSSSSSSSSSSS------------S-------S-S-S-S---S---SSS--------------------
---SSS-S-SSSSSSSS---------------------------S----------SS-------------S-------S-
-----------------------------------------------S--------------------------------
S-------------------------------------------------------------------------------
-------------S--S--------------------------S--------------S-------------S-------
---------------S---S---------------S-----S--S----------------S------------S-----
----S------S-------------------------------S-----------------------------------S
------------------S--------------------------------------S-------------S--------
----------------------------------------S-----S---------------------------------
--------S--------S------------------------------------------------------S-------
--------------------------------------------------------------------------------
------S--S--------------------------S----S--------------------------------------
--------------------------------------
>forward_86
------------------------------------------------------------------CGGAAGGTTTGGCC
ATTTGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_1376
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TTGTGCTCCCACCAGACTTG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_491
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ACGTTGGCA
GTGACTGATGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_1793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GTGTAGGTCTCTGCAAGGCA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_1200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AAATTCCCCCTAACCGCGAT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2974
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GGGGGTGTCTCATACGGTTG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_2656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TCCT
TTGGGTGGAAGGGGTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_3484
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CGGAGCATGAACCGGTACTT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
