>input_sequence_38810
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-----------------------------------------------------------------------ATGTCTTGC
TTTGGATGCTGTGGTGATGAAGATACTCAAAGAGCACCAGACAACAGGAATCAATACCCAGGAAGCCATCCAGCAAGTAA
TAACTTTGACTTCTTTTTTGTTACCATTCTATCATA-------CCATTTCTCATACTGCATTTTACTTCTGTTGCCTGAT
AATATTTATCTAATGAACTGCAACTGATCTGCAGGGAATGATGCATACCGCACTGCCGATCCAATTCCCAAAGGTCCTCA
ACCTGTGAAAGTGCAACCCATTGCAGTTCCCACCATTCCTATGGATGAAATTAGGGAGGTTACAAAGGGTTTTGGTGATG
AGGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGTATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAG
CTGGACTCCAGTAAGCAGCCAGACCAAGAATTGCTGGCACAGGTTCGTGTTTGTCCCTGTTTAGGAATTCTGCATTTACT
ATGGTCTTCTATCTCACAAATTACATTCACAGGTATCTATGGTGTCAAGGCTTAAGCATGAAAATGTTGTTGAGTTGCTT
GGTTACTGTCTTGATGGGAACACCCGTGTCCTTGCTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGG
TATGGTTTTGTGCAATTTGAAGTCTTGAACATTTCGTGTAATGTTATTTTATTCATCTATTGGCGCAGTTAAGTTCTTAT
GTTAA--ATAAACCTTTACTTTAAATGTTTACAGGAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGTCCGGTCTTATCATG
GATACAACGGGTGAAGATAGCTGTTGGTGCCGCGAAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATAC
ACAGGGACATCAAGTCCAGCAACGTTCTTCTCTTTGATGATGATGTAGCTAAAATAGCTGACTTCGATTTGTCAAACCAA
GCTCCTGACATGGCAGCCCGGCTTCACTCAACTAGGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGT
TTTCTTTCAGTTGTTCATTTGCTCCATGAAGCTTTGGAGTCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATG
CGATGACTGGTCAACTTAGCTCTAAGAGCGATGTGTACAGTTTTGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAA
CCTGTCGACCATACATTACCGAGGGGGCAGCAGAGCCTTGTCACATGGGTAATTTTTGTGC--------CCAATACTGCA
CAAGTGATCTCCTTTGGAGCTGTTCTGTTTGGTGGATGGAATTCTAACAATTGTTTGGTAAACACTGGCAGGCCACCCCA
AGACTGAGTGAAGATAAGGTTAGGCAATGTGTTGACTCAAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGT
ATCATAAATAGCCTCTCTTGGTTTCGAAACAATGCATGAGTTAAGCAGTCTGTGTCAGTTATCAGTATTTTATAAAGTAT
AAAGATGTGGAAAATAAAATACTGATCTTACTGGAACTTACCAAGCTTGCCATTTTTGTTTTGAATGGATGAGTAATACT
CCCTCCGTCCGGAATTACGT---------------------------------------------ACGCTCAAACGGATG
TATGTAACATTATTTTAGTGCTAGATACATCCATTTGAGCGTC------------AAGTAATTTTGGACGGAGGGAGTAC
TAGCTAAGAATTTCATTTCCAGAAACTGTGTTTGTTGTCACATATAGTA-AAAAGTATTTCTGCAGCTGCTTTTATGCTC
ATAAAATATGTCCCGCTACTGAAATTAACATCATTCTTGGAGCATGCTTGGTTCCATCTGTCATAACTAAGTCGAGGTAC
TCTTCGGCAAAGCCACTTGTGACACCATTTCTTTTTCTGCTTGTTGTTTCAAACAGTTTGCAGCCGTCGCGGCATTGTGC
GTCCAATACGAAGCCGACTTCCGGCCAAACATGAGCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAATGCGCGAGCAGC
CCACCCTGGGGCTGAGCATGCCGGACGCTAA-------------------------------------------------
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-------------------------------------------
>chr1D_1_TraesCS1D01G081400
TTGGTGTTGGAATTGCATGGCTGGTTGAGCTGTGGGCAAGAGCGAGTGAAGAACTGAGCTGGCGCGCCCGCCAGCCCGCC
AAGATTGTTTGCGCGC------------------AATTTCAGTTTAATTGCATGCAAATTTAGAAGTAGTTATCGTTAAG
TTCAAAGCTGTGGACCAGGTAGCAATGTACTCCCACCCTCTCATTTATCATAGCTACCTTGTGGCGGTTGCACTTGTTTA
CTAGTAAAAGGAAGCG---CATAATTTGCGAGTGTTCATCTGGTGCGGTGGGCCAGCCGCTGCTAGCTGGATGAATAATC
TAACACGTTTCCAACCGCTATGCGTCATTGGGTCTGGATCAATGTGGTATGAAACCTGTAGGATATTGAGAAGTATCAAG
GATGTTGATGCAGAATGAGCTGTCTTTTGGTCAGCTATAATAGCTGGTAGTGGTTGTTAGTTTCCGCCCTCCATTTAGAT
TCCAATCCTACCTGGGAAG------ATAAGAAATAATAAAGCACAGAGGAATGGCTCCATATTTTAGGTTTTCCTTGACA
GAGAATGTTTGCACATGAACTTGGTGTGCACATGAGATTGTTTTCCTTGATAGAAAATATATGCGTGATTTCTGTAGTTC
CCTTACTGCATGTACCGTAAAA---TATGCTGCACCTGCAAGCAAGTCATGGTTCACTTATGGGC-TTGGTTTTTCCATT
TGAGATAGATACAGAGGAGAGAAAGTAAGACGAAGGGAAGCAAAGTAGTGGGATAAAATGAACGAAGAGGAGAAATTTAG
CTGTACATCTCAAGCATTCAT-TCACTTGTTTCCT-AAAATTCAACTTCTGTTTCCCCATTGGGGCCATTACGCTATCTA
CAGAATGAAGTATGAATCGAAACTAAGTCACCTTCC--------------------------------------------
----------------------------------GTTTATGTTCCCAACCGAGTACTCCCTTGTTTGTTTCTGTATGAGC
TATCTACGTTCATACTGCTGATTCTGATAAAAAGATTCTTGGTTCCAGCCAGGACTTGTTTTCAGAAGAATATGTCTTGC
TTTGGATGCTGTGGTGATGAAGATACTCAAAGAGCACCAGACAACAGGAATCAATACCCAGGAAGCCATCCAGCAAGTAA
TAACTTTGACTTCTTTTTTGTTACCATTCTATCATA-------CCATTTCTCATACTGCATTTTACTTCTGTTGCCTGAT
AATATTTATCTAATGAACTGCAACTGATCTGCAGGGAATGATGCATACCGCACTGCCGATCCAATTCCCAAAGGTCCTCA
ACCTGTGAAAGTGCAACCCATTGCAGTTCCCACCATTCCTATGGATGAAATTAGGGAGGTTACAAAGGGTTTTGGTGATG
AGGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGTATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAG
CTGGACTCCAGTAAGCAGCCAGACCAAGAATTGCTGGCACAGGTTCGTGTTTGTCCCTGTTTAGGAATTCTGCATTTACT
ATGGTCTTCTATCTCACAAATTACATTCACAGGTATCTATGGTGTCAAGGCTTAAGCATGAAAATGTTGTTGAGTTGCTT
GGTTACTGTCTTGATGGGAACACCCGTGTCCTTGCTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGG
TATGGTTTTGTGCAATTTGAAGTCTTGAACATTTCGTGTAATGTTATTTTATTCATCTATTGGCGCAGTTAAGTTCTTAT
GTTAA--ATAAACCTTTACTTTAAATGTTTACAGGAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGTCCGGTCTTATCATG
GATACAACGGGTGAAGATAGCTGTTGGTGCCGCGAAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATAC
ACAGGGACATCAAGTCCAGCAACGTTCTTCTCTTTGATGATGATGTAGCTAAAATAGCTGACTTCGATTTGTCAAACCAA
GCTCCTGACATGGCAGCCCGGCTTCACTCAACTAGGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGT
TTTCTTTCAGTTGTTCATTTGCTCCATGAAGCTTTGGAGTCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATG
CGATGACTGGTCAACTTAGCTCTAAGAGCGATGTGTACAGTTTTGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAA
CCTGTCGACCATACATTACCGAGGGGGCAGCAGAGCCTTGTCACATGGGTAATTTTTGTGC--------CCAATACTGCA
CAAGTGATCTCCTTTGGAGCTGTTCTGTTTGGTGGATGGAATTCTAACAATTGTTTGGTAAACACTGGCAGGCCACCCCA
AGACTGAGTGAAGATAAGGTTAGGCAATGTGTTGACTCAAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGT
ATCATAAATAGCCTCTCTTGGTTTCGAAACAATGCATGAGTTAAGCAGTCTGTGTCAGTTATCAGTATTTTATAAAGTAT
AAAGATGTGGAAAATAAAATACTGATCTTACTGGAACTTACCAAGCTTGCCATTTTTGTTTTGAATGGATGAGTAATACT
CCCTCCGTCCGGAATTACGT---------------------------------------------ACGCTCAAACGGATG
TATGTAACATTATTTTAGTGCTAGATACATCCATTTGAGCGTC------------AAGTAATTTTGGACGGAGGGAGTAC
TAGCTAAGAATTTCATTTCCAGAAACTGTGTTTGTTGTCACATATAGTA-AAAAGTATTTCTGCAGCTGCTTTTATGCTC
ATAAAATATGTCCCGCTACTGAAATTAACATCATTCTTGGAGCATGCTTGGTTCCATCTGTCATAACTAAGTCGAGGTAC
TCTTCGGCAAAGCCACTTGTGACACCATTTCTTTTTCTGCTTGTTGTTTCAAACAGTTTGCAGCCGTCGCGGCATTGTGC
GTCCAATACGAAGCCGACTTCCGGCCAAACATGAGCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAATGCGCGAGCAGC
CCACCCTGGGGCTGAGCATGCCGGACGCTAAGCTCCACTCC------TTGTATGATATAATAGATAAGGAAAAATGAGCC
ATCAATTGTTGTTCTTGCGGGGCGCGTGGCAGGCGGTTTTTGTACATTTGTGATTATTCTTCCCAAGTTGTAACCCTCGA
GATTCTAGTACCAGAAATATTTGATTCTTTGTATCGGTTGCAAGGTCAGCAAGTATCTAGTACCTAGAACACTTGTCATC
AGAC----AGAAAAAGGAAGAAAATAAACACTGCTGCGTGAGCTTATGTCATTTGCTTCCAAGTCCAGATTCCAGA----
------------------ACAAATTTCTCATTTTGTGTTGGATTTATCTCTGTATAGCCTTGTTTGGAACAGGAATCTTG
CTAAGATTTTACTGGAATCTCAAACAGAAACAGAAGGGGAAAAGAATCGCATAATGGACTCAAGAAGCAAGAATTAACAA
TGTACTTTGGTGATCTCAAACATCTTATATGTACTTTGGTGATCTAAAACGTATTATATTAGTTTACAGAGGAACAGTAG
AATGTCTTATATTAGTTTACAGAGGAAGT---AGATGCTAAAGAGTACCAAATGTCTTATATTAGAAGAAT---------
----------------------------AGATGCTTAA------------------------------------------
--------------GAGTACTAAACATCATA----AAGTACAGGATTACAGTTAACTACCATACATGAACTAGCAGCTGA
GCTACACTGCTACGGTCTAGAGGACTAAACCTGGATGTCGACGAATTCTGGTCTCTGAACATCTGACCATGCAGCATGCC
CAGGCCTAAACCTAATTTTACAACGCTACTCCAGCACATGGCTGGCTTCTTAAAGCTACAGAGCGAGCTAGTTGCTCACC
TAAAGTCTAGAGTCTCCAACTTCTCTACACAAGATCACGCTGTTCTCAACGCTTTGCGAGGACCATCACGACCAGCATTG
ACATGCCGGCGACGAACTTGAACGTATCATTCTCCCAGAAGGGCTTCTTGCCTTCGTCATGGCGAGGGCCGTTGGGCTGC
TTCATGGCCATCTGATCCTTGAGCTCTTTGAGCTGCTTGTCCC
>chr1B_1
TTGGTGTGGGAATTGCATGGCTGGTTGAGCTGTGGGCAAGAGTGAGTGAAGAACTGGT-------GCCCGCCAGCCCGCC
AAGATTGTTTGCGCGCCAGCCATTTCCCTCGCGCAATTTCAGTTTAATTGCATGCAAATTTAGAGGTAGTTATCTTTAAG
CTCAAAGTTGTGGACCAGGCAGTAATGTACTCCCACCCTCTCATTTATCGTAGCTACCTTGTGGCGGTTGCACTTGTTTA
C---TAAAAGGAAGCG---CATGATTTGCAAGTGTTCATCTGGTGCGGTGGGCCAGCAGCTGATAGCTGGATGAATAATC
TAACATGTTTCCAACCGCTATGCGTCATTGGGTCTGGATCAATGTGGTATGAAACCTGTAGGATATTGACAAGTATCAAG
GATGTTGATGCAGAATGAGCTGTCTTCTGGTCAGCTATAATAGCTAGTAGTGGTTGTTAGTTTCTGCCTTCCATGTGGAT
TCCAATCCTACCTGGGAAG---ATAATAAGAAATAATAAAGCACAGAGGAATGGCTCCATATTTTAGGTTTTCCTTGACA
GAGAATGTTTGCACATGAACTTGGTGTGCACATGAGATTGTTTTCCTTGATAGAATATATATGCGTGATTTCTGTAGTTC
CCTTACTGCATGTACCGTAGAA---CATGCTGCACCTGCAAGCAAGTCATGGTTTACTTATGCGCTTTGGTTTTTCCATT
TGAGATAGATACAGAGGAGAGAAAGCAAGACAAAGGGAAGCAAAGTAGTGTGATAAAATGAATGAAGAGGAGAAATTTAG
CTGTACATCTTAAGCATTCCTCTCACTTGTTTCCT-AAAATTCAACTTCTATTTCCC-ATTGGGGCCATTACGCTCTCTA
TAGAATGAAGTA------GAACCTAAGTCACCTTCCATTTCTCTCCACTAGTCCTGCGCCACATGCTATTAGTATTTGTC
TGATATATGACCACAAAATTACAGTTACAGTTCCGTTTATGTTCCCAACCGAGTGCTTGCTTGTTTGTTTTTGTATGAGC
TATCTATGTTCATACTGCTGGTTCTGATAAAAAGATGCTTGGTTCTAGCCAGGACTTGTTCTCGGAAGAATATGTCTTGC
TTTGGATGCTGTGGTGATGAAGATACTCAAAGAGCACCAGACAACAGGAATCAATACCCAGGAAGCCATCCAGCAAGTAA
TAACTTTGAATTTTTTTT-GTTACAATTCTATCATATGCAACCCCATTTCTCGTACTGCATTTTGCTTCTGTTGCCTAAT
AATATTTATCTAATGAACTGCAACTGATCTGCAGGGAATGATGCATATCGCACTGCCGATCCAACTCCCAAAGGTCCTCA
ACCTGTGAAAGTGCAACCCATTGCAGTTCCCACCATTCCTATGGATGAAATTAGGGAGGTTACTAAGGGTTTTGGTGATG
AAGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGTATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAG
CTGGATTCCAGTAAGCAGCCAGACCAAGAATTGCTGGCACAGGTTCGTGTTTGTGCCTGTTTAGGAATTCTGCATTTACT
ATGGTATTCTATCTCACAAATTACATTCACAGGTATCTATGGTGTCAAGGCTTAAGCATGAAAATGTTGTTGAGTTGCTT
GGTTACTGTCTTGATGGGAACACCCGTGTCCTTGCTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGG
TATGGTTTTGTACAATTTGAAGTCTTGAACATT-CTTGTAATGTTTTTTTATTCATCTATTGGTGCAGTTAAATTCTTAT
GTTAA--ATAAACCTTTACTTTAAATGTTTACAGGAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGACCAGTCTTATCATG
GATACAACGGGTGAAGATAGCTGTTGGTGCAGCGAAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATAC
ACAGGGACATCAAGTCCAGCAACGTTCTTCTCTTTGATGATGACGTGGCTAAAATAGCCGACTTTGATTTGTCAAACCAA
GCTCCTGACATGGCAGCCCGGCTTCACTCAACTAGGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGT
TTTCTTTCAGTTGCTCATTTGCTCCATGAAGCTTTGGAATCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATG
CAATGACTGGTCAACTTAGCTCTAAGAGCGATGTGTACAGTTTCGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAA
CCTGTCGACCATACATTACCGAGGGGGCAGCAGAGCCTTGTCACATGGGTAATTTTTGTACCCAATAGGCCAATACTGCA
CAAGTGATCTCCTTTGGAGCTGTTCTGTTTGGTGGATGGAATTCTAACAATTGTTTGGTAAACACTGGCAGGCCACCCCA
AGACTGAGTGAAGATAAGGTTAGGCAATGTGTTGACTCAAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGT
ATCATAAATAGCCTCTCTTGGTTTCGAAACAATGCATGAGTTAAGCAGTCTGTGTTAGTTATCAGTATTTTATAAAGTAT
AAAGATGTGGAAAGCAAAATACTGATTTTACTGGAACTTACAAAGCTTGCCTTTTTTGTTTTGAATGGATGAGTAATACT
CCGTCTGTCCAGAAT--------------------------------------------TACTTGACGCTCAAACGGATG
TATCTAACACTATTTTAGTGCTTGATACATCCGTTTGAGCATCAAGTAATTCATCAAGTAATTCGGGACAGAGGGAGTAC
TAGCTAAGAATATCATTTCCAGAAATTGTGTTTGTTGTCACATATATAGTAAAAATATTTCTACAGCCAGTTTTATGCTC
ATAAAATATGTCCCACTACTGTGATTAACATCATTCTTGGGGCATGCTTGGTTCCATCTGTCATAACTAAGTCGAGGTAC
TCTTCGGCAAAGCCACTTGTAACACCATTTCTTCTTCTGTGTGTTGTTTGAAACAGTTTGCAGCCGTCGCTGCATTGTGC
GTCCAATACGAAGCCGACTTCCGGCCAAACATGAGCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAACGCGCGAGCAGC
CCACCCCGGGGCTGAACACGCTGGACGCTAAGCTGCACTCCGGCCTTTTGTATGATATAATAGATAAGGAAAAATGAGCC
ATCAATTGTTGTTCTTGCGGGGCATGTGGCAGGCGGTTTTTGTACATTTGTGATTATTCTTCCCAAGTTGTAACCCTCGA
GATTCTAGTACCAGAAATATTTGATTCTTTGTATCGGTTGCAAGGTCAGCAAGTATCTAGTACCTAGAACACTTGTCATC
AGACAG--AGAAAAAGGAAGAAAATAAACACTGCTGCGTGAGCTTATGCCATTTGCTTCCAAGTTCAGATTCCAGATTGG
TTACATATCATTCAATCAACAAATTTCTCTTTCTGTTTTTTGTTTCTTTGTAAGAATCTTGGA-----------------
--AAGGTTTTACTGGACTCTTAAACAGAAACAGAAGGGGACAA-AGTCGCATAATGCTTGTACTAAATCAGTGACACTTA
TTTTAG--------------------------------------------------------------------------
-----------------TACTGAGGAAGT---AGATGCTAAGGAGTACTCCTTCGTAAAGAAATATAAGAGCTTAGATCA
CTAAATGCACTTATTTTAGTATGGAGGAAGTAGATGCTAAGGAGTACTCCTTCTGTAAAGAAATATAAGAGCTTAGATCA
CTACGTTTAGTAGGGAGTACTAAACATGATAAGATAAGTACAGGATTACAGTTA-CTACCATACATGAACTAGCAGATGA
ACTACATTGCTACGGTCTAGAGGACTAAACTTGGATGTCGGCGAATTCTGGTCTCTGAACAT-TGACCATGCAGCATGTC
CAGGCCTAAACCTAATTTTACAACGCTACTCCAGTACATGGCTGGCTTCTAAAAACTACAGAGCGAGCTAGCTGCTCACC
TAACTT-----------AACTTCTCTACACAAGATGACGCTGTTCTCAGCGCTTTGCGAGGACCATCACGACCAGCATTG
ACATGCCGGCGACGAACTTGAACGTGTCATTCTCCCAGAAGGGCTTCTTGCCTTCGTCGCGGCGAGGGCCCTTGGGCTGC
TTCATGGCCATCTGATCCTTGAGCTCCTTGAGCTGCTTGTCCC
>chr1A_13
------------TTACATGACTGGTTGAACTGTGGGCAAGAGTGAGTGAAGAACTGAGTTGGCGCGCCTGCCAGACCGCC
AAGGTTGTTTGCGCGCT----ATTTCCCTCGCGCAATTTCAGTTTAATTGCATGCAAATTTAGAAGTAGTTATCGTTGAG
CTCAAAGCTGTGGACCAGGCAGTAATGTACTCCCACCCTCTCATTTATCATAGCTACCTTGTGGCGGTTGCACTTGTTTA
C---TAGCAAAAGGAAGCACATAATTTGCAAGTGTTCATCTGGTGCGGTGGGCCAGCCACTGATAGCTGGATGAATAATC
TAAGACGTTTCCAGCCGCTATGCGTCATTGGGTCTGGATCAATGTGGTATGAAACCTGTAGGATATTGACAAGTATCAAG
CATGTTGATGCAGAATGAGCTGTCTTTTGGTCAGCTATAATAGCTAGTAGTGGTTGTTAGTTTCTGCCTTCCATGTGGAT
TCCAATCCTACCTGGGAAGATAATAATAAGAAATAATAAAGCACAGAGGAATGGCTCCATATTTTAGGTTTTCCTTGGCA
GAGAATGTTTGCACATGAACTTGGTGTGCACATGAGATTGTTTTGCTTGATAGAAAATATATGTGTGATTTCTGTAGCTC
CCTTGCTGCATGTACCATAGAAGAATATGCTGCACCTGCAAGCAGGTCATGGTTCACTTATGGGC-TTGGTTTTTCCATT
TGAGATAGATACAGAGGAGAGA--GTGAGACAAAGGGAAGCAAAGTAGTGGGATAAAATGAATGGAGAGGGGAAATTTAG
CTGTACATCTTAAGCATTCCT-TCACTTGTTTCCTAAAAATTCAACTTCTATTTCCCCATTGGGGCCATTACGCTATATA
CAGAATGAAGTATGAATCGAAACTAAGTCACCTTCCATTTCTCTCCACTAGTCCTGTGGCACGTGCTATTAGTATTTGTC
AGATATATGGCCACAAAACTACAGTTACAGTTCCGTTTATGTTCCCAACCGAGTGCTCGCTTGTTTGTTTTTGTATGAGC
TATCTATGTTCATACTGCTGGTTCTGATAAAAAGATGCTTGGTTCCAGCCAGGACTTGTTCTCGGAAGAATATGTCTTGC
TTTGGATGCTGTGGTGATGAAGATACTCAAAGAGCACCAGACAACAGGAATCAATACCCAGGAAACCATCCAGCAAGTAA
TAACTTCGAATTCTTTTTTATTACAATTCTATCATCTGCAACCCTATTTCTCGTACAACATTCTACTTCTGTTGCCTGAT
AATATTCATCTAATGAACTGCAACTGATCTGCAGGGAATGATGCATATCGCACTGCCGATCCAACTCCCAAAGGTCCTCA
ACCTGTGAAAGTGCAACCCATTGCAGTTCCCACCATTCCTATGGATGAAATTAGGGAGGTTACTAAGGGTTTTGGTGATG
AAGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGTATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAG
CTGGATTCCAGTAAGCAGCCAGACCAAGAATTGCTGGCACAGGTTCGTATTTCTCCCTGTTTAGGAATTCTGCATTTACT
ATGGTCTTCTATCTCACAACTTACATTCACAGGTATCTATGGTATCAAGGCTTAAGCATGAAAATGTTGTGGAGTTGCTT
GGTTACTGTCTTGACGGGAACACCCGTGTCCTTGCTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGG
TATGGTTTTGTACAATTTGAAGTCTTGAACATT-CGTGTAATGTTTTTTTATTCATCTATTGGTGCAGTTAAGTTCTTAT
GTTTGATATAAACCTTTACTTTAAATGTTTACAGGAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGTCCGGTCTTATCATG
GATACAACGGGTGAAGATAGCTGTTGGTGCAGCGAAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATAC
ACAGGGACATCAAGTCCAGCAACGTTCTTCTCTTTGATGATGATGTAGCTAAAATAGCCGACTTCGATTTGTCAAACCAA
GCTCCTGACATGGCAGCCCGGCTTCACTCAACTAGGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGT
TTTCTTTCAGTTGCTCATTTGCTCCATGAAGCTTTGG-ATCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATG
CAATGACTGGTCAACTTAGCTCTAAGAGCGATGTGTACAGTTTTGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAA
CCTGTCGACCATACATTACCGAGGGGGCAGCAGAGCCTTGTCACATGGGTAATTTTTGTAC--------CCAATACTGCA
CAAGTGATCTCCTTTGG---------------TGGATGGAATTCTAACAGTTGTTTGTTATACACTGGCAGGCCACCCCA
AGACTGAGTGAAGATAAGGTTAGGCAATGTGTTGACTCTAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGT
ATCATAAATAGCCTCTCTTGGTTTCGAAACACTGCATGGGTTAAGCAGTCTG--TCAGTTATCAGTATTTTATAAAGTAT
AAAGACGAGGAAAACAAAATACTGATTTTGCTGGAACTTACTAAGCTTGCCATTTTTGTTTTGAATGGATGAGTAATACT
CCCTCCGTCCGGAATTACTTGACGCTCAATCGGATGTATCTAGCACTAACGCCAGGAATTACTTGACGCTCAAACGGATG
TATCTAGCACTAACGCCTGTTCGAGCATGTCA-----------------------AAGTAATTCCGCACGGAGGGAGTAC
TAGCTAAGAATTTAATTTCCAGAAACTGTGTTTGTTGTGGCATAG---GTAAAAGTATTTCT------------------
ATAAAATATGTCCTACTACTGTGATTAACATCATTCTCGGAGCATGCT-------ATATGTCATAACCAAGTCGAGGTAT
TCTTAGGTGAAGCCACTTGTAACACCATTTCCTCTTCTGCGTGTTGTTTGAAACAGTTTGCAGCCGTCGCGGCATTGTGC
GTCCAATATGAAGCCGACTTCCGGCCAAACATGAGCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAATGCGCGAGCAGC
CCACCCCGGGGCTGAGCATGCCGGACGCTAAGCACCACTCCGGCCTTTTGTATGAT---ATAGATAAGGAAAAATGAGCC
ATCAATTGTTGTTCTTGCGGGGCGCGTGGCAGGCGGTTTTTGTACATTTGTGATTATTCTTCCCAAGTTGTAACCCTCGA
GATTCTAGTACCAGAAATATTTGATTCTTTGTATCGGTTGCAAGGTCAGCAAGTATCTAGTACCTAGAACACTTGTCATC
GGACAGAGAGAAAAAGGAAGATAATAAACACTGCTGCGTGAGCTTATGCCATCTGCTTCCAAGTCCAGATTCCAGA----
------------------ACAAATTTCTCATTTTGTGTTGGATTTTTCTTTGTATAGCCTTGTTTGGAACAGGAATCTTG
CTAAGATTTTACTGGAATCTCAAACAGAAACAGAAGGGAAAAGGAGTCGCATAATGGACTGAAGAAGCAGGAATTAGCCA
TGTACTTTAATGATCTAAAACATATTACATGTACTTTAGTGATCTAA---------------------------------
AATGTCTTATATTAGTTTACAGAGGAAGTGGTAGATGCTGAAGAGTACTAAACCTCTTAAATTAGAGGAAT---------
----------------------------AGTAGATGCTAAAGAGT-----------------------------------
---------------AGTACTAAACATCATAGGATAAGTACAGGATTACAGTTAACTACCACACATGAACTAGCAGCTGA
GCTACACTGCTACGGTCTAGAGGACTAAACCTGGACGTCGACGAATTCTGGTCTCTGAACATCTGACCATGCAGCATGTC
CAGGCCTAAACCTAATTTTACAACGCTACTCCAGTACATGACTGGCTTCTTAAAACTACAGAGCGAGCTAGTTGCTCACC
TAACAT-----------AACTTCTCTACACAAGATGACGCTGTTCTCAGCGCTTTGCGAGGACCATCACGACCAGCATCG
ACATGCCGGCGACAAACTTGAACGTATCATTCTCCCAGAAGGGCTTCTTGCCTTCGTCGCGGCGAGGGCCGTCGGGCTGC
TTCATGGCCATCTGATCCTTGAGCTCCTTGAGTTGCTTGTCCC
>SNPs
-------S----------------------------------S---------------S---------------------
--------------------------------------------------------------------------------
S------------------S--S---------------------------------------------------------
-SSS-------------------------S--------------------------------S-----------------
---------------------------------------------------------------------S----------
---------------------------------------------S------------------S---S-----S-S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-------------------------------S------------------------------S-----------------
----------S--------S------------------------------S-----------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S---S-----------S---------
------S-------------S---------------S-----------------------S--S----------------
--------------------------------------------------------------------------------
---------S--------------S---------------------------S---------------------------
-----------------------------------------------S----------------S---------------
---------------------------------------------------------------S----------------
-S------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S---------------------S-----------S-----------------S----------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
-------------S------------------------S-----------------------------------------
-S------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------S--------------S--------------------------------------
------------------S-------------------------------------------------------------
---S-----S------------S---------S-------S----------------------SS---------------
----------------------------------------------SSS-------------S----SSS----------
--------------S------SS---------------------------------------------------------
--------------------S------------S------S--------S------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------------------------------S---S------------------------------
---------------------------------------------S--------------S---------------S-S-
--------SS------S------S---S---------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
------------------------------------------------S----S-----S--------------------
------------------------------SS-S-SSS------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------------------------S-------------------S-------------------------
---SS-SSSSSSSSSSS------------------S------------S-------------------------------
----------------------------------------------------------SS--------------------
--------------------------S----------------
>forward_469
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-------------------------------------------------GTGGTTGTTAGTTTCCGCCC-----------
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>reverse_1526
--------------------------------------------------------------------------------
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-----CTCCAGTAAGCAGCCAGACC-------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1019
--------------------------------------------------------------------------------
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---------------------------------------TGTTCCCAACCGAGTACTCC---------------------
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>reverse_2865
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGGACGGAGGGAGTAC
TAGC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>forward_2739
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CCCTCCGTCCGGAATTACG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_4135
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCTACAGAGCGAGCTAGTTG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
