>input_sequence_38773
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------------------------------------------ATGAGCACACAGAGTGTAATTCCTGTGAAACATTTCAT
TGCTCCTGACATCAGGGCTCACACCTGCAATGCTCCACAACCTTCAGTCCATCAAATGTTCAATGCTAAATCCGATATTT
ACAGTTCGGCAGATGATACTTCCCGAGTCTCGTATGCTGACCTATCAGACCCGAATTCATCCAGCTCTTCCACATTCTGC
ACAAGCATGTACTCATCGTCGTCGACAAAACCCAGTGGATTTT------------------CTTTCCTGCCCCATCCTTC
TAAATGTGAGCAGCAGCAGGTATCAGCTGCAAAATCATCGAGCTCTTCTTTGCTGTTTGCTGCTGATCCAAGCACTGGCG
TTCATGGTGATCTTGAACATCCACTTGATCTCAAGGACTTCCTTAACCTCTCCGGCAACGCTTCTGACAGTAGCTTCCGT
GGAGGAGGCAATGCCATGGATTTCAGTGAGCAGCTGGAGTTTCAGTTCTTGTCTGAACAACTTGGGATTGCCATCACCGA
CAACGAGGAGAGCCCTCGGTTAGATGTGAGTACCTTTAGGTCCATGGTTGATCCTTCACTTAACATCATTATCTGAGTAT
TTCTTCAACTAGCTTCTTGAGTTCACATGCACCTTTATCTTGGCTAAGTTCAGATTTTAACTAGTCATTTTCCATATAAA
TCA---TTGCTTAGGACATATATGGCATACCGCCGCAATGCTCACCTAGTCTAGTATCCCCTTCCTCTGACCATGAGGAT
CTGCGCAGTGGGGGTTCTCCGGTTGAAGCCCAGTTGACGTCATCACATTCTTCATCTGGAG---CAACATGTAGCAAAAC
GAGAATGAGATGGACACTTGAG--CTCCATGAGCGTTTTGTGGAGGCTCTGAAAAAGCTCGGAGGACCGGAAAGTAGGGT
GATCCCTCT-GTTAAATTTTTGGGGTAA-TTTTTCTTGAAAATAGAACCGTCCCTTAGATGTTTTGTTCCATGTACATAT
CTTCCAGAGGCAACTCCCAAGGGTGTGCTGAAGCTTATGAAGGTAGAAGGCTTGACAATCTTTCACGTAAAGAGCCATTT
GCAGGTAAATGGCCAAATATCTTTAAATGCATACTCACAAACATATCATCACATTACGATGTTTATACACAACTTGTTAT
TTCAAAATGCAGAACTATCGACATGTGAAGTATATTCCGGAG-AAAAAAGAAGGTAAGACAACTAAGGTGAAGGGAAAAT
CAATACAGATTAAGTGTAAAATAATTTCTGAATATTTGACATAGTGGCAGTTGTTTTCATTCATAATCTTGTCATTCTCA
TGAAAAGTTGCTTTGAGTTGTAATTTTGTCATTCTCATGAAGTTTTTTTTTTTGGCTCCATGCTAAATCTAGTGAAGAGA
CCATGTTCAGAAGATAACAACGCAAAATCAGCATCTGGAATTGATTCTGGCAACAAGAAGTATCTCCCTCTCCAGAACTT
GCTATCTCTTTTTATGTTAGCATGAGGGGCATGCAAAAACTGTGTCATCAAAGTTCACATCGATTTCCATTTCTTAGGAG
TTTTCAAATGGCGGAAACTCTACGGATGCAAATGGAGGTTCAGAAACAGCTCCATGAGCAACTAGAGGTAACAGTGTGAT
---AAGAAGATGTTGATAGGTTCAGAAACAGTTCTTGGTTAATCTATATAAGCATACTGCAACTTATCTTTGCAAGCCTT
TGTCAGCATTCTTGGTTAATCTATGCTTTACCTATTTGATAAGAAGAATTATTTTTATTAGTCATCACA--------TAT
ATTCAGAAAAA-CTCGTAGCTTATCAGCAGTGTTAACTTTGTTGTTTTGGCCATCAGGTGCAAAGGGAATTACAGCTGCG
CATAGAGGAGCATGCAAGATATTTGCAGCAGATACTAGAACAACAGAAGGCCAGAAAATCTACGGTGCCGAAACCAGAGG
AGAAAACAGAGGTCAACACCACTTCAGCTCCGCCGCTGAAGCGTAAAATTTCAGACACCG-AA-TAGAACACAACTCGCA
GATGGATAGCAGAAGGCCAGAGCTACAACTTGATCTTGAAAGTGAACCATGA----------------------------
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---------------------------------------------------------------
>chr6D_1_TraesCS6D01G097000
GAAGAAGATTAGTCAAGTTTGGCACTGGGTTTATATATTTTCTAAATTTTGCATAAGTGCATCCATCTATTTGTCCCAAG
TGAAAATTTATAAAGTTCGACGAGTTTATAGAAAACAATAGGAACATTCACAATAACAAAAATATCTGATGTCAAAATAT
ATCCAGTGATGAATCTAACGGTATTGATTTGGAATTGTGTATGTCAATGATTTCTTTATAAACCCCCTCAAAAAAATGAT
TTCTTTATAAACTTGGT---------------------------------------------------------------
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------------CAAAGTTTAGAAAGTTTGACTTGAGACAAAACTAATGTCCAGATTAAATAGAAACGGAGGGAGTGTCT
ATTCTCT--CCCTGTACGTGAGTTTGATTTCATGGTTTGTGAAAAGAAGTTTTAGACATGACCGTAGCAATCATAGGAAG
CAAACGATCATCTCTACTCTTATAAAAAATGGAGTTGGTGATGATGGTGTGCCTGCCATCCCGCAACATAGGCCGTCCGA
TCTATATCTGATGGATAGGAAGGAAACTATGACAATTTTGCAAAAAGATACCCGCACTCCTTTCCACATTTGCAGATAAG
GCCTTCCCTTGTTCATCTTTATCTCCCAAAAGATAAACTACTCATATAAATGCATCTTGATGTTCCGTGCAATGCACGGG
CATCTTGCTAGTTACCTCTGAAATATGAGTGGCTATCGTTGAAGGGTCTAAATCATCTGGGAATATTCTTATGTCCCTTA
TGTACACTCTTTTAGCATATTTCTTAGGTCAATCTGGATCATTCTATTGATAGACTAGTACTCCCAAGTCAAAT--AATG
CTTTGTTTTTCTT-CATAAATGATGTCCACTGGACAAGATTAGACTTCCTGCGCCCATATTTATGAACAATTTTTCATTT
AC-ATATTGAAATACATTGTTTGACAGGCTTTGGAACTTATATTGTGCTTGACTGGATATTTAAGCTGTAGGGTTGGACT
GGAGCA-AGCTTTCCATCTCAATTCTCATTTTCTAAGGCACAATGAGCACACAGAGTGTAATTCCTGTGAAACATTTCAT
TGCTCCTGACATCAGGGCTCACACCTGCAATGCTCCACAACCTTCAGTCCATCAAATGTTCAATGCTAAATCCGATATTT
ACAGTTCGGCAGATGATACTTCCCGAGTCTCGTATGCTGACCTATCAGACCCGAATTCATCCAGCTCTTCCACATTCTGC
ACAAGCATGTACTCATCGTCGTCGACAAAACCCAGTGGATTTT------------------CTTTCCTGCCCCATCCTTC
TAAATGTGAGCAGCAGCAGGTATCAGCTGCAAAATCATCGAGCTCTTCTTTGCTGTTTGCTGCTGATCCAAGCACTGGCG
TTCATGGTGATCTTGAACATCCACTTGATCTCAAGGACTTCCTTAACCTCTCCGGCAACGCTTCTGACAGTAGCTTCCGT
GGAGGAGGCAATGCCATGGATTTCAGTGAGCAGCTGGAGTTTCAGTTCTTGTCTGAACAACTTGGGATTGCCATCACCGA
CAACGAGGAGAGCCCTCGGTTAGATGTGAGTACCTTTAGGTCCATGGTTGATCCTTCACTTAACATCATTATCTGAGTAT
TTCTTCAACTAGCTTCTTGAGTTCACATGCACCTTTATCTTGGCTAAGTTCAGATTTTAACTAGTCATTTTCCATATAAA
TCA---TTGCTTAGGACATATATGGCATACCGCCGCAATGCTCACCTAGTCTAGTATCCCCTTCCTCTGACCATGAGGAT
CTGCGCAGTGGGGGTTCTCCGGTTGAAGCCCAGTTGACGTCATCACATTCTTCATCTGGAG---CAACATGTAGCAAAAC
GAGAATGAGATGGACACTTGAG--CTCCATGAGCGTTTTGTGGAGGCTCTGAAAAAGCTCGGAGGACCGGAAAGTAGGGT
GATCCCTCT-GTTAAATTTTTGGGGTAA-TTTTTCTTGAAAATAGAACCGTCCCTTAGATGTTTTGTTCCATGTACATAT
CTTCCAGAGGCAACTCCCAAGGGTGTGCTGAAGCTTATGAAGGTAGAAGGCTTGACAATCTTTCACGTAAAGAGCCATTT
GCAGGTAAATGGCCAAATATCTTTAAATGCATACTCACAAACATATCATCACATTACGATGTTTATACACAACTTGTTAT
TTCAAAATGCAGAACTATCGACATGTGAAGTATATTCCGGAG-AAAAAAGAAGGTAAGACAACTAAGGTGAAGGGAAAAT
CAATACAGATTAAGTGTAAAATAATTTCTGAATATTTGACATAGTGGCAGTTGTTTTCATTCATAATCTTGTCATTCTCA
TGAAAAGTTGCTTTGAGTTGTAATTTTGTCATTCTCATGAAGTTTTTTTTTTTGGCTCCATGCTAAATCTAGTGAAGAGA
CCATGTTCAGAAGATAACAACGCAAAATCAGCATCTGGAATTGATTCTGGCAACAAGAAGTATCTCCCTCTCCAGAACTT
GCTATCTCTTTTTATGTTAGCATGAGGGGCATGCAAAAACTGTGTCATCAAAGTTCACATCGATTTCCATTTCTTAGGAG
TTTTCAAATGGCGGAAACTCTACGGATGCAAATGGAGGTTCAGAAACAGCTCCATGAGCAACTAGAGGTAACAGTGTGAT
---AAGAAGATGTTGATAGGTTCAGAAACAGTTCTTGGTTAATCTATATAAGCATACTGCAACTTATCTTTGCAAGCCTT
TGTCAGCATTCTTGGTTAATCTATGCTTTACCTATTTGATAAGAAGAATTATTTTTATTAGTCATCACA--------TAT
ATTCAGAAAAA-CTCGTAGCTTATCAGCAGTGTTAACTTTGTTGTTTTGGCCATCAGGTGCAAAGGGAATTACAGCTGCG
CATAGAGGAGCATGCAAGATATTTGCAGCAGATACTAGAACAACAGAAGGCCAGAAAATCTACGGTGCCGAAACCAGAGG
AGAAAACAGAGGTCAACACCACTTCAGCTCCGCCGCTGAAGCGTAAAATTTCAGACACCG-AA-TAGAACACAACTCGCA
GATGGATAGCAGAAGGCCAGAGCTACAACTTGATCTTGAAAGTGAACCATGATGAACGATAATGGTGCATGCTTTAACCC
TCTTGCCATGTAGAGTTCTAGTGCTTGCAATTGCATATATCATGTTTTTCTTGAATATACCTTATGACA-----------
-------------AGGTCCATCCATTAATGCTGAAATAGGTTCTAGCTAAGCCATTGTATATAATTAGTTCTGCTGCTTG
TTTCCATGAAAAAACAAGATATTCTCATATGTAATTAAACTAGCGTTGTATTTCAAACATAAATGTCGCATTGCTCCCTG
TTCATGCTCATGAGCATCTTAAGCATCCAAGATAAACTGAATTAAATCAAAGTTTGAGGTTGCGATGTGAACCCTACATA
TGGGGAGTACTGCGACGAGATGATGCGCGTGGCACTGGACACTACGGACATCCTGGCGGCATGCCTGGACGTTACAGACG
TCCTGAGCACCCTAAACGCCTTCGTCGCTTGGATTGCGAAGGGCCGTGGCAAAGGTAGCCAGGAGGGAGAAAAGGAATCA
GGTGGTCTCTAAGAAGTATACCATCTAAGCCTCTA--AGGAGTTGACGCAATTTCGATGGGTTT-GAATTTGATGGAATG
GAATAAGTTGAACCC--GATGTTTTGATTGATCTTACATGTTATGTAATGATGAGACCTGCACTTGATGCAATTAGTTGG
T----AAAAAATACCAAAACTAAAATATTGTTTCAACTT---TCATTCTTTGCTGGTACCATAACAAGAGAA--TCTGCC
TACACAACTTCATACTTTTTTACCTGTAT----TGCCTATCTACAAAAATGGATGTGCGGCTTTCTGAAAAGACTTTCAA
GAATGGATGCGCTTGAAAGACCTCTAAATGTGAGGAAACACTGCGAAATTAGTCAAAAATACACAAATAGTCCCTG----
---TCCTGATTGCAAATGTTGTCACATCGTAGACATCTT-CTGTAGAATCCATGGGATCATCCAGGTACTGCTAGTTTTG
CGCAGGGTTATTACCTGCAGGTAAAAATTT-GGAATATTAGTGAATTGTGTAAATTAATCAAA
>chr6A_1
GAAGAAGATCAGTCAAGTTTGGCACTGGGTTTATATATTTTCTAAAATTTGCATAAGTGCATCCATCTATTTGTCCCAAG
TGAAAATTTATAAAGTTCCACAAGTTTATAGAAAACAATAGGAACATTCACAATAACAAAAACATCTGATGTCAAAATAT
AGCCAGTGATGAATCTAACGGTATTGATTTGGAATTGTATATGTCAATAATTTCTTTATAAAC-----------------
------------TTGGT---------------------------------------------------------------
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------------CAAAGTTTAGAAAGTTTGACTTGAGACAAAACTAATGTCCAGATTAAATAAAAACGGAGGGAGTGTCT
ATTTTCTCTCCCTGTACGTGAGTTTGATTTCATGGTTTGTGAAAAGAAGTTCCAGACATGACCGTAGCAATTATAGGAAG
CAAACTATCAT---------------------------------------------------------------------
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------------TACCTCTGAAATATGAGTGACTATTGTTGAAGGGTCTAAATCATCTGGGAATATTCTTATGTCCCTTG
TGTACATTCTTTTAGCATATTTCTTAGGTCAATCTGGATCATTCTATTGACAGCCTAGTACTCCCAATTCAAATGTAATG
CTTTGTTTTTCTT-GCATAATGATGTCT-CTGGACAAGATTAGACTTTTTGCACCCATATTTCTGAACAATTTTTCATTT
TAGATATTGAAA-------TTTGAAAGGACTTGGAACTTGTATGCTGCTTGACTGGATATTTAAGCTGCAGGGTTGGATT
GGAGCA-AGTTTTCCATCTCGATTATCATTCTCAAGGGCACAATGAGCACACAGAGTGTACTTCCTGTGAAAGATATCAT
TGCTCCTGACAGCATGGCTCACACCTGCAATGTTCCACAACCTTCAGCCCATCAAATGTTCAATGCTAAATCTGAAATTT
ACAGTTCGGCAGATGGTATTTCCCGCGTCTCATATGCTGACCTATCAGACCCGAATTCATCGAGCTCTTCCACATTCTGT
GCAAGCATGTACTCGGCGTCACCGACGAACTCCAAATTATGCTGGCAAATCAGCGGTTTGCCTTTCCTGCCTCATCCTCC
TAAATGTGAGCAGCAGCAGTTTTCAGCTGCGCAGTCATCGATCTCTGCTCTGTTGTTTGCTGCTGATCACAGCGATGGTG
GTCAAGGTCATGATGAACATTCACATGATCTCAAGGACTTCCTTAACCTCTCCGGCAATGCTTCTGACAGTAGCTTCCGT
GGAGGAGGCAGTTCCATGGATTTCAGTGAGCAGCTGGAGTTTCAGTTATTGTCTGAACAACTTGGGATTGCCATCACCGA
CAACGAGGAGAGCCCTCGGTTAGATGTGAGTACCTTTAGTTCCATGGTTGATCCTTCACTTAACATCATTATCTGAGTAT
TTCTTCAACTAGCTTCTTGAGTTCACATGCACCTTTATCTTGGCTAAGTTCAGATTTTAACTAGTTATTTTCCATATAAC
TCA---TTGCTTAGGACATATATGGCATAGCGCCGCAATGCTCACCTAGTCTACTATCCCCTTCCTCTGACCATGAGGAT
CTGCGCAGTGGGGGTTCTCCGGTTAAAGTCCAGTTGAGTTCATCACCTTCTTCATCTGGAGCAACAACATGTAGCAAAAC
GAGAATGAGATGGACACTTGAG--CTCCATGAGCGTTTTGTGGAGGCTCTGAAAAAGCTCGGAGGACTGGAAAGTAGGGT
GATCACTCT-GTTAAATTTTTGGGCTAATTTTTTCTTGAAAATAGAACCAACGTTTAGATGTTTTGTTCCATGTACATAT
CTTGCAGAGGCAACTCCCAAGGGTGTGCTGAAGCTTATGAAGGTAGAAGGCTTGACGATCTTTCACGTAAAGAGCCATTT
GCAGGTAAATGGCCAAATATCTTTAAATGCATACTCACAAACATAT-ATCACATTACGATGCTTATACACCACTTGTTAT
TTCAAAATGCAGAACTATCGACATGTGAAGTATATTCCGGAG-AAAAAAGAAGGTAAGACGACTAAGGTGAAGGGAAAAT
CTATACAGATTAAGTGTAAAATAATTTCTGAATATTTGACATAGTGGCAGTTGTTTTCATTCATAATCTTGTCATTCTCA
TG--AAGTTGCTTTGAGTTGTAATTTTGTCATTCTCATTAAGTTTT--TTTTTGGCTCCATG-CTAATCTAGTGAAGAGA
CCATGTTCAGAAGATAACAAGGCAAAATCAACATCTGGAATTGATTCTGGCAAAAAGAAGTATCTCCTTCTCCAGAACTT
GCTATCTCTTTTTATGTTAGCATGAGGGGCATGCACAAAAAGTGTCATCAAAACTCACATCAATTTCCATTTCGTAGGAG
TTTTCAAATGGCTGAAGCTCTACGGATGCAAATGGAGGTTCAGAAACAGCTCCATGAGCAACTAGAGGTAACAGTGTGAT
---AAGAAGATGCTGATAGGTTCAGAAACAGTTCTCATGAAGTTCAG--------------------------AAGCCTT
TGTCAGCATTCTTGGTTAATCTATGCTTTAC-TATTTGATAAGAAGAATTGTTTTTATTAGTCATCACAGAACTTACTAT
ATTCAGAAAAA-CTCGTAGCTTATCAGCAGTGTTAACATTGTTGTTTTGGCCATCAGGTGCAAAGGAAATTACAACTGCG
CATAGAGGAGCATGCAAGATATTTGCAGCGGATACTAGAACAACAGAAGGCCAGAAAATCTCTGGTACCGAAACCAGAGG
AGAAAACAGAGGCCAGCACCACTTCAGCTCCGTCGCTGAAGTGTAAAATTTCCGACACCG-AAATAGAACAGAACTTGCA
AATGGATAGCAGAAGGCCAGAGCTACAACTTGATCTTGAAAGTGAACCGTAATGAACGATCATGGTGCATGCTTTAATCT
TCTTGCCATGTAGAGTTCTAGTGCTTGCAATTGCATATATCCTGTTTTCCTTGAATATACCTTATGACA-----------
-------------AGGT------------------------TCTAGCTAAGCCAGTGTATATAAGTAGTTCTGCTGCTTG
TTTCCAGGAATAAACAAGATATTCTCATCTGTAATTAAACTAGCATTGCAGTTCAAACATAGATGTCACAAAGCTCCCTG
TTCATGCTCATGAACGTCTTAAGCATGCAAGATAAACTGAATTAAATCGAAGTTTGAGGTTGCGATGTGAACCCTACATA
TGGG-AGTACTGCGGCGAGATGATGCGCGTGGCACTGGACGTTACGGACGTCCTGGCGGCATGCCTGGACGTTACGGACG
TCCTGAGCACCCTAAACACCT-----GCTTGGATTGCGAAGGGCCGTGGCCAAGGTAGCCAGGAGGGAAAG-AGGAATCA
GGTGGTCTCTCAGAAGTATACCATCTAAGCCTCTAAGAGGAGTTGATGCAATTTCGATGGGTTT-GAATTTGATGGAATG
GAATAAGTTAAGAACCTGATGTTTTGATTGATCTTACATGTTATGTAATGATGAGACCT-CACTTGCTGCACTTAGTTGG
TA---AAAAAATACCAAAACTAAAATATTGTTTCAACTT---TCATTCTTTGCTGGTTCCATAACAAGAGAA--TCTGCC
TACACAACTTTATACTTTTTTACCTGTAT----TGCCTATCTACAAAACTGGATGTGCGGCTTTCTGAAAAGAGTTTCAA
GGATGGATGCACTTGAAAGACCTCTAAATGTGAGGAAACACTGCGAAATTAGTCAAAAATACACAAATAGTCCCTG----
---TCCTGATTGCAAATGTTGTCACATGGTAGAAATCTT-CTGTAGAATCCATGGGATCATCCAGGTACTGCTAGTTTTG
CGCAGGGTTATTACCTGCAGGTAAAAATTT-GGAATATTAGTGAATTGTGTAAATTAATCA--
>chr6B_239
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AT
TTTTTTATAAACTTGATCAAAGTTTAGAAAGTCTGACTTGACACAAAACTAATATCCAGATTAAATAAAAACGGAGGGAG
CGTCTATTTTCTGTCCTGGTACGTGAGTTTGGTTTCATGATTTGTGAAAAGAAGTTCCAGACATGACCGTAGCAATCATA
GGAAGCAAACGATCATAAACAGATGATCATTACCTCTGAAATATGAGTGGCTATTGTTGAAGGGTCTTAATCATCTGGAA
TTATTCTTATATCCCTTATGTACACTCTTTTAGCATATTTCTTAGGTCAATCTGGATCATTCTATTGACAGACTAGTACT
TCCAAGGAAATTTGCCCATTTCTTGTGTCATGTTTCATGTGCCCTTTCGATTTCTGTGTTTTCATTTTGTCCTGCTTTAT
GGGAAGGAACTATCATCAGGTTTTGGTAGCATTTTTTCTTTGGAGAAGGGAATAGCCCCAGCCGAGTTTTGGTAGCTTTA
ATCTTCCCTAGAAGAAGAAGATTAGTCAAGTTTGGAACTGGGTTTATGTATTTTCTAATGAGTTTAAAATTTGCATAAGT
GCATCTATCTGTTTGTCCCAAGCGAAGATTTATAAAGTTCGAACAAGTATATTGAAAACAATAGGAACATTCACAACAAT
AAAAATATCGAATGTCAAAATATATGCAGTGATGAATCTAATGGTATTGATTTGGAATTGTATATGTCAATAGTTTTTTT
TATAAACATGACCAAAGTTTAGGAAGTTTGACTTGAGACAAAACTAATGTCCAGAGAAGTAAAAAACAGAGGGAATGTCT
ATGTTTTCCCCCTAAACATGAGTTTGATTTCATGATTTGTGAAAAGAAGTTCCAGACATGGCCGTTGCAATCATAGGAAG
CAAACTATCAT---------------------------------------------------------------------
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------------TACGTCTGAAATATGAGTAGCTATTATTGAAGGGTCTGAATCATCTAGGAATATTCTTATGTCCCTTA
TGTACACTCTTTTAGCATATTTGTTAGGCCAATATGGATCATTCTATTGACAGACTAGTACTCCCAAATCAAAT--AATG
CTTTGTTTTTCTTGCATAAATGATGTTTACTGGACAAGATTAGACTTTTTGCAACCATATATATGAACAATTTTTCATTT
AC-ATATTGAAATACATTGTTTGACAGGCCTTGGAACTTATATTGTGCTTGACTGGATATTTAAGCTGTAGGGTTGGACT
GGAGCA-AGCTTTCCATCTCAATTCTCATTTTCTAAGGCACAATGAGCACACAGAATGTAATTCCTATGAAACATATCAT
TGCTCCTGACATCAGGGCTCACACCTGCAATGCTCCACAACCTTCAGTCCATCAAATGTTCAATGCTAAATCCGATATTT
ACAGTTCGGCAGATGATACTTCCCGAGTCTCGTATGCTGACCTATCAGACCCGAATTCATCCAGCTCTTCCACATTCTGC
ACAAGCATGTACTCATCGTCGTCGACAAAACCCAGTGGATTTT------------------CTTTCCTGCCCCATCCTTC
TAAATGTGAGCAGCAGCAGGTATCAGCTGCAAAATCATTGAGCTCTTCTTTGCTGTTTGCTGCTGATCTGAGCACTGGCG
TTCATGGTGATCTTGAACATCCACTTGATCTCAAGGACTTCCTTAACCTCTCCGGCAACGCTTCTGACAGTAGCTTCCGT
GCAGGAGGCAATGCCATGGATTTCAGTGAGCAGCTGGAGTTTCAGTTCTTGTCTGAACAACTTGGGATTGCCATCACCGA
CAACGAGGAGATCCCTCGGTTAGATGTGAGTACCTTTAGTTCCATAGTTGATCCTTCACTTAACAGCATTATCCGAGTAT
TTCTTCAACCAGCTTCTTGAGTTCACATGCGCCTTTATCATGGCTAAGTTCAGATTTTAACTAGTCATTTCCCATATAAT
TCATTCTTGCTTAGGACATATATGGCATACCGCCGCAATGCTCGCCTATTCTTGTATCGCCTTCATCTGACCATGAGGGT
CTGCGCAGTGGGGGTTCTCCGGTCAAAGTCCAGTTGAGTTCATCACCATCATCATCGGGAGCTACAGCATGTAGCAAAAC
GAGAATGAGATGGACACTTGAG--CTCCATGAGCGTTTTGTGGAGGCTCTGAAAAAGCTCGGAGGACCGGAAAGTAGGGT
GACCACTCTAGTTAAATTTTTGGGGTAATTTTTTCTTGAAAATAGAACCGTCGATTAGACGTTTTGTTCCATGTATATAT
CTTGCAGAGGCAACTCCCAAGGGTGTGCTGAAGCTTATGAAGGTAGAAGGCTTGACAATCTTTCACGTAAAGAGCCATTT
GCAGGTAAATGGCCAAATATCTTTAAATGCATACTCACAAACATATCATCACATTACGATGTTTATACACCACTTGTTAT
TTCAAAATGCAGAACTATCGACATGTGAAGTATATTCCGGAG-AAAAAAGAAGGTAAGACAACTAAGGTGAAGGGAAAAT
CTGTACAGATTAAGTGTAAAATAATTTCTGAATATTTGACATAGTGGCAGTTGTTTTCATTCATAATCTTGTCATTCTCA
TG--AAATTGCTTTGAGTTGTAATTTTGTCATTCTCATTTAGTTTT--T--TTGGCTCCATG-TAAATGTAGTGAAGAGA
ACCTGTTCAGAAGATAACAAGGCAAAATCAGCACCTGGAATTGATTCTGGCAAAAAGAAGTATCTCCCTCTTCAGAACTT
GCTATCTCCTTTTATGTTAGCATGAGGGGCATGCACAAACCGTGTCATCAAAATTCACATCGATTTCCATTTCTTAGGAG
TTTTCAAATGGCGGAAGCACTACGGATGCAAATGGAGGTTCAGAAACAGCTCCATGAGCAACTAGAGGTAACAGTGTGAT
AAGAAGAAGATGCTGATAGGTTCAGAAACAGTTCTTGGTTAATCTATAT--GCATACTGCAACTTATCTTTGCAAGCCTT
TGTCAACATTCTTTGTTAATCTATGCTTTACCTATTTGATAAGAAGAATTATTTGTATTAGTCATCACAGAACTTACTAT
ATTTAGAAAAATCTCGTAGCTTAGCAGCAGTGTTAACACTATTGTTTTGGCCATCAGGTGCAAAGGAAATTACAGCTGCG
CATAGAGGAGCATGCAAGATATTTGCAGCAGATACTAGAACAACAGAAGGCCAGAAAATCCCCGGTACCGAAACCAAAGG
AGGAAACAGAGGTCAACACCACTTCAGCTCCGTCGCTGAAGCGTAAACTTTCAGACACCAAAA-TAGAACACAACTCGCA
GATGGATAGCAGAAGGCCAGAGCTACAACTTGATCTTGAAAGTGAACCATGATGAACAATCATGGTGCATGCTTTGACCC
TCTTGCCATGTAGAGTTCTAGTGCTTGCAATTGCATATATCCTGTTTTTCTTGGATATACCTTATGATAAGGTCCATCCA
TTAATGCTGAAATAGGT------------------------TCTAGCTTAGCCATTGTATATAATTAGTTCTGTTTCCAT
------TGAAAAAACAAGATATTCTCATATGTAATTAAAGTAGCGTTTTATTTCAAACATTGATGTCGCATTGCTCCCAG
TTTAGGCTCGTGAGCGTCTTAAGCATGCAAGATAAACTGAATTAAATCAAAGTTTGAGGTTGCGATGTGAACCCTACATA
CGGGGTTAACGTGGATTTCTCTCTAAAATACAACTCCTTAATCAGGGACGGAGCCAGTATTTGAACATGAAGGGGGTGAA
CAGAGGGAGTATAT------------------------------------------------------------------
----------------------ATATAAGCCTCTA--AGGAGTCGAGGCAATTTCGATGGGTTTAGAATTTGATGGAATG
GAATAAGTTGAGAACCGGATGTTTGG-TTGATCTTACATGTTACGTAATGATGATACCTGCACTTGCTGCGATTAGTTGG
TATACAAAAAATACCAAAACTAAAATATTGTTTCAACTTCTTTCTTTCTTTGCTGGTACAATAGCAAGAATACTTCAGCC
TACACAACTTAATATATATTTTTACCTTGATTATGCCTTTCTACAAAACTGGATGTGTGGCTTTCCAAAAAGAGTTTCAA
GAATGGGTGCATTTGAAAGACATCTAAATGTGAGGAAACACTGCCAAATTAGTCAAAAA--CATAAATAGTCCATGTCCT
GGCTCCTGACTGCAAATGTTGTCACATGGTAGAAATCTTTCTGTAGAATCCATGGGATCATCCAAGTACTCCTAGTTTTG
TGCAGGGTTATTACCTGCAGGTATAAATTTCGGAATATTAGTGAATTGT--------------
>chr3D_247
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------ATAAACTTGTCCAAGGTTTATAAAGTTTCACTTGGAACACAACTAATATCTAGAGTAAATGAAAACTTAGGAAT
-GTCTATCTTTTCTCCTTACACATGAGTTTGATTTCATGATTTGTGAAAAGAAGTTCCATAAATGACCGTAGCAATCATA
GGAAGCAAACC--------------ATCATTACCTCTGAAATATGAGTGGCTATTGTTGAAGGGTCTAAATT--------
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------------------------------------------------------ATCTCGGAATATTCTTTTGTCCATTA
TGTACACTCTTTCAGCATATTTCTGAGGTCAATATAGGTCATTCTATTGACAGAT---TACTCCCAAGTCAAAC--AATG
CTTTGTTTT--------------------------------------CTTGCACCCATATTTCTGAACAATTTTTCATTT
AC-ATATTGAAATACATAGTTTGACAGGCCTTGAAATTTGTATAGTGCTTGAATGAATATTTACTCTGCAGGATTGGATT
GGAGCAAAGCTTTCCATCTCACTGCTCATTTTCTAAGGCACAATGAGCACACAGAGTGTACTTCCTGTGAAACATATCAT
TGCTCCTAACAGCATGGCTCACGCCTGCAATGCTCCACAACCTTCAGTTCATCAAATATTCAATTCTAAATCTGATAATT
ACAGTTCGGCAGATGATGTTTCTCGCGTCTCGTATGCTGACTTACCAGACCAAATCTCATCGAACTCCTCCACATTCTAT
GCAAGCATGTACTCATCGTCGTCGACGAACTCCAAATTATGCCGGCAAACCAGCAGTTTGCCTTTCCTGCCTCATCCTCC
TAAATGTGAGCAGCAGCAGTTTTCAGCAGCGCAATCATCATTCTCTGCTTTGTTATTTGCTGCTCATCCCAGCAATGGTG
GTCAAGGTGATGATGAACATTCACATGATCTCAAGGACTTCCTTAACCTATGTGGAAACACTTCTGACAGTAGCTTCCAC
CGAGGAGGCAATGCCCTGGCTTTCAGTGA---------------------------------------------------
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>chr3A_846
--------------------------------------------------------------------------------
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---------------------------------------------TTCTTGCACCCATATTTATGAACAATTTTTCATTT
AC-ATATTGAAATACATAGTTTGACATGCCTTGGAATTTGTATAGTGCTTGAATGAATATTTACTCTGCAGGATTGGATT
GGAGCAAAGCTTTCCATCTCACTTCTCATTTTCTAAGGCACAATGAGCACATAGAGTGTACTTCCTGTGAAATATATCAT
TGCTCCTGACAGCATGGCTCACACCTGCAATGCTCCACGACCTTTAGTTCGTCAAATATTCAATTCTAAATATGATAATT
ACAGTTCGGCAGATGAGGTTTCTCGCGTCTCGTATGCTGACTTACCAGACCAAATCTCATCGAGCTCTTCCACATTCTGT
GCAAGCATGTACTCATCATCGTCGACGAACTCCAAATTATGCCGGCAAACCAGCGGTTTGCCTTTCTTGACTCATCCTCC
TAAATGTGAGCAGCAACAATTTTTAGCAGCGCAATCATCATTCTCTGCTCTGTTATTTGCTGCTCATCCCAGCAATGGTG
GTCAAGGTGATGATGAACATTCATGTGATCTCAAGGACTTCCTTAACCTATGTGGAAATGCTTCTAACACTAGCTTCCAC
CGAGGAGGCAATGCCCTGGCTTTTAGTGAGCAGCTAGAGTTTTAGTTCTTATCTGAACAACTTGGCATTACTATCACAAA
CAACAAGGAGAGCCTTCGGTTAGATGTGAGTACCTTTAGTTCCATGGTTGATCCTTCAATTAACAACATTATCCGAGTAT
TTCTTCAACTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>chr3D_1481
--------------------------------------------------------------------------------
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------------------------------------------------------------CTTGGCATTGCTATCACGAA
CAATGAGGAGAGCCTTCGGTTAGATGTGAGTACCTTTAGTTCCATGGTTGATCCTCCACTTAAATGCATTATCCGAGTAT
TTCT-CAACTAGCTTCTTGAGTTCACATGCGCCTTTATCATGGCTAAATTCAGATTTTAA-TAGTCATTTTACATATAAT
TATTTCTTGCTTAGGACATATATGGCATACCGCCGCAATGCTCGCCTATTCTAGTATCGCCTTCCTCTGACCATGAGGGT
CTGCACAGTGGGGGTTCTCTGGTTAAAGTCTAGTTGAGTTCATCACCATCTTCATCTGGAGCTACAACATGTAGCAAAAT
GAGAATGAGATGGACACTTGAGATCTCCATGAGCGTTTTGTGGAGACTCCGAAAAAGTTCGGAGGACCGGAAAGTAGGGT
GATCACTCT-GTTAAATTTTTGGGGC-A-TTTTTCTTGAAAATAGAACCATCGTTTAGATG-TTTATTCCATGTACATAT
CTTGTAGAGGCAACTCCCAAGGGTGTGCTGAACCTTATGAAGGTAGAAGGCTTGACAATCTTTCACGTAAAGATCCATTT
GCAGGTAAATGGCCAAATATATTTAAATGCATACTCACAAACATAGCATCACATTGCGATA-TTATACACCACTTGTTAT
TTCAAAATGCAGAACTATCAACATGAGAAGTATATTGCGGAGAAAAAAAGAAGGTAAGACAACTAAGGTGAAGGAAAAAT
CTATATAGATTAAGTGTCATATAATTTCTGAATATTTGACATAGTGGCAGTTGTTTTCATTCATAATCTTGCCATTCTCA
TG--AAGTTGCTTTGAGTTGTAATTTTGTCAATCTCATGAAGTTTTCTTT------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>chr3A_1588
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-------ACTAACTTCTTGAGTTCACATGCGCCTTTATCATGGCTAAATTCAAA-TTAAA-TAGTCATTTTCCATATAAT
TCTTTCTTTCTTAGGACATATATGGCATACCACCGCAATGCTCGCCTATTCCAGTATCGCCTTCCTCTGACCATGAGGGT
C-GCGCAATGGGGGTTCTTCGGTTAAAGTCTAGTTGACTTCATCACCATCTTCATCTCGAGCTACAACATGTAGCAAACT
GAGAATGAGATGGACACTTGAGTGCTCCATGAGCATTTTGTGGATACTCTGAAAAAGCTTGGAGGATCGGATAGTAGGGT
GATCACTCT-GTTAAATTTTTTGGGC-ATTTTTTCTTGAAAATAGAACCATCGTTTAGATGCTTTGTTCCGTGTACATAT
CTTGCAGAGGCAACTCCCAAGGGTGTGCTGAAGCTTATGAAGGTAGAAGGCTTGACAATCTTT--CGTAAAGAGCCATTT
GCAGGTAAATGGCCAAATATCTTTAAATGCATACTCACAAACATATCATCACATTGCGATA-TTATACACCACTTGTTAT
TTCAAAATGCAGAACTATCGACATGAGAAGTATATTGCGGAG-AAAAAAGAAGGCAAGACAACTAAGGTGAAGGA-----
-TATATAGATTAAGTGTAATATAATTTCTGAATATTTGACATAGTGGCAGTCGTTCTCATTCATAATCTTGTCATTCTCA
TG--AAGTTGCTTTGAGTTGTAATTTTGTCATTCTCATGAAGTTTTCTTT------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>SNPs
---------S------------------------------------S---------------------------------
------------------S--S----------------------------------------S-----------------
-S------------------------------------S---------S--------------SSSSSSSSSSSSSSS--
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---S-----------------------------------------------SS---------------------------
-----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS------------------------S-------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------S--------------------S---S---------------------------
-----------------------------S--------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------S---S---------S-------S---------------------------------
--------------------------------------------------------------------------------
----S-----------------------------------------------SS--------------------------
---S----------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--SS------------------------------------------S---------------S-----------------
--------------------S--------------------------------S--------------------------
-----------------------------------S----S-----------S---------------------------
----------------S---------------------------------------------------------------
------------S------------------------------------SS-----------------------------
--------------------------------------------------------------------------------
-------------------------------------S----------------------------S-------------
-------------------------------------------------------------S----S-------------
--------------------------------S-----------------------------------------------
------------------------------------------------------------S-------------------
-----------------------------------------S--------------------------------------
-----------------SSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
-------------------------------------------------------------S------------------
---------------S----------S-----------------------------------------------------
-----------------------------------------S-------S-------------------------S----
-----------------S---SSSSS------------------------S-----------------S-SS--------
----------S-----------------------------------S---------------------------------
-----------SSS----------------------------------------------------S-------------
--------------------------------------------------------------------------------
----------S-------------------------------------S------------------------S------
----------S---------------------------------------------------------------------
---------------------------S-----S----------------------------------------------
-------------------------------------------------------------SS
>forward_1267
--------------------------------------------------------------------------------
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-----------------------------------------------ATACCCGCACTCCTTTCCAC-------------
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---------------------------------------------------------------
>reverse_2724
--------------------------------------------------------------------------------
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---CCAGAGGCAACTCCCAAGG----------------------------------------------------------
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---------------------------------------------------------------
>forward_2070
--------------------------------------------------------------------------------
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--------------------------------------------------TGCTGTTTGCTGCTGATCCA----------
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---------------------------------------------------------------
>reverse_4062
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------AATGTCGCATTGCTCCCTG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
