>input_sequence_38739
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-----------------------------------------ATGCTCCACTCCGGCCTCTCCAAGTCCCAGCCCCTACCG
CTCCTCGCGGGAGCGTCTTCGCCTCGCCGCGCCCTCCTCGCCGGTCTCCTCCGCGCCGGGTACTTCTCTAAGTCCGCTAC
CTCCTCACCCGCGCTTCGTCCGTCCGCCACCCGTGCGAGCACCAGGGCGGCGACTACCCCGCGAGATCCCTCGCGCTTCG
GCCTGGGACACAGGGTCTCGTTCTCCACTGCACCAGATGGTTCTGATTCGGTCGGCGGCGGCGGGAGGTCGCTCCCTTGG
CTAGCCGCCGGGAGCGTCGATAGCGGCGTCCCCACCTCAAGGACTAGCGCCGGACGCTCCTCCTCGTGGGAGAGCTCCGC
TGATAAGTTCTTCTCTAAAGGCGACCAAAGTGCGCGAGTAGAGACATTGGAAGATAGCGTTTCATACAAGGAGGGGGGAA
TTGGAGGGGAGGAGAATGAACCGATTGACAATCCCAAGTGGGGGCGGATTAAGGATAAGTTCCGGCAAAACGTGGCAAGG
GATGAAGGGTCCCGTGACCGTGGTGAGAGGTTTGAAAAACCGGATGTGAGGCGGTGGAACAAGCAAGAGGACCGTGGTGA
GAGGTTGGACAAGCCGGATGTGAGGCGGTGGAACAAGCAAGAGGACCGTGGTGAGAGGTTTGACAAACCGGATGTGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGAGAGGTTTGACAAGCCGGAT
GTGAGGCGGTGGAACAAGCAAGAGGACCGTGGTGAGAGGTTT--------------------------------------
----------------------------------------------------------------------AGAGGGGAGA
GGTTC---------------------------------------------------------------------------
----------------------------------------------------------AACCAGCCAGATGTAAGGCGGT
GGAACAAGCAAGAGGACTGGGGCAGGAAGACATGGAAGGAGGTAGGGGAATCGACAGTGCCAAAGATGGTTGGGGAGGGG
GTTTACGGTGTTGGGCCGGTACTTGCGGCTCTCACGGCTGGGAGGAGGGAGTTCTATGCATTGTACACACAGGAAGGAAT
GGATTTGAGCAGGAGCAACAAGAAGAAGAAGGACAAAAGGGGGATTGAGAAGGTGCTGCTGATGGCAGAGACTATCGGGC
TTAAAGTTATTGAGGCGTCAAAGCATGACCTCAACATGGTGGTGGATAACCGTCCACATCAAGGTCTGGTGCTTGATGCA
TCACCCTTGGAAATGGTGAATACTAAGGAGTTGGAACGAGTCAGGGTTCGTGGTGGCAAGGCACCAGTCTGGATAGCTTT
GGATGAGGTTATGGACCCTCAGAATTTGGGAGCCATAATTAGATCAGCCTACTTCTTTGGTGCGGAGGGTGTTGTCTTGT
GCGCTAAGAACTCTGCTCCATTAAGTGGAGTAGTGAGCAAAGCTAGTGCAGGCTCGCTTGAGTTGATTGAGCTGCTTTCG
TGTAGGAATATGATGCAGTTTCTGTCTTCATCAGCTGAAAATGGGTGGCGAGTTCTTGGTGGTACCGTCGCTCCAAAAGC
TATACCTCTCTCTGAAGTTACCACAGGGGAGCCAACAATTCTGGTGTTGGGCAGTGAAGGCACCGGTCTGAGGCCCCTGG
TTGAGCGATCCTGCACACATTTGGTCAAAATTGCTGGTAATGCTGATGGATTTGTTGTAGAAGAAGAAATAGATGCCACA
GATGCAGATATAGGGGAAGAAGGTGATAATTATTCAGGTATTCAAGATATGAAATCATTCCTTGCAGTAGAGAGCTTAAA
TGTTAGCGTGGCAGCAGGAGTTTTGCTTTATCATCTGGCTGGAAAGAATGTCCACCCTGTAACTGAGAAGCCTAGCATCT
CTCCTGTGTAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr3A_1_TraesCS3A01G276400
CAAAAAATGTGTATTTGTCGTGTGCCAAGGATTTTTGGTTTCATGTGGCATGTTCAAATTTGTCACAACGATTTTTGGCA
GGGTCATGGGAGAAAATGTTGCCACAATGCCGCATACATACAACGATAACGTTGCTGACAGGTGCAACATTGGGGTGTGG
AATCTATGGACTTAAGAAAGAGTTGGCCTGTGGAGTTGTCTAGAGTTGTAGAGTTGATTGTAGTTGCTTGAAGATAAAAC
TTTTGATCTATGAATTTCAGGACTTGCACGGAGTTGATTGCAGTTGCTTGAAGCTATCATTTCACAATAGGAGTGTATTC
ACAACAACCACGGTTTAAGTGGGCTCCACCCTTGCAGGAAAAGTAAGTCCAACACCAACATACTCCCTCTGTTTCAAATT
AGTTGACTAGGATTTGTCTAGATACGGATAAGTATCTTACAATCAATAGTTGTCGACTAGGCCGATCCACGCTCAAGAAA
TACCATGGGTATTATTTCTTCTATAAATGACCTTTTTCTAAGCTTAGTTGCTTCACTGATCTCTCCAAAAACTTGTACCC
ACATCTGGCTTTTTAAAATCGTGTCAAACCGTTTGGCATGTCTAATACA-CGCAGTGACGGTTCGGCGCCACTTTGAGGG
GGCAAGTGGTGTGCTTAATAAGTTTTTAAAAGGGCTACTCAGGGATAAGAATCAAATATGGATCCACTTGATAAGTGGTG
TGCTTAATAAAATATGGATCCACAATAAGTTTTTAATATTGTGGATTTGTGGGGGTGCTAGTGAGACATGTGACAAATGT
ACAAAATAAAATTTGCTCGATGGCCCTAAATATGGATCCACTTGACAAATTAATAATGGTAAACTGTGGGGTGGCTCGCC
AAAAACTGCCCCTTTCTCATCTCAGCGCGTCATCCTCGCCGAAGCATTTCGTCGAGCGAGGGCCGCGCGCCGCCCAAAAC
CCCACATCCCAAATCAAAACCCTACGCTCCGCCGCCGCGCCATGCTCCACTCCGGCCTCTCCAAGTCCCAGCCCCTACCG
CTCCTCGCGGGAGCGTCTTCGCCTCGCCGCGCCCTCCTCGCCGGTCTCCTCCGCGCCGGGTACTTCTCTAAGTCCGCTAC
CTCCTCACCCGCGCTTCGTCCGTCCGCCACCCGTGCGAGCACCAGGGCGGCGACTACCCCGCGAGATCCCTCGCGCTTCG
GCCTGGGACACAGGGTCTCGTTCTCCACTGCACCAGATGGTTCTGATTCGGTCGGCGGCGGCGGGAGGTCGCTCCCTTGG
CTAGCCGCCGGGAGCGTCGATAGCGGCGTCCCCACCTCAAGGACTAGCGCCGGACGCTCCTCCTCGTGGGAGAGCTCCGC
TGATAAGTTCTTCTCTAAAGGCGACCAAAGTGCGCGAGTAGAGACATTGGAAGATAGCGTTTCATACAAGGAGGGGGGAA
TTGGAGGGGAGGAGAATGAACCGATTGACAATCCCAAGTGGGGGCGGATTAAGGATAAGTTCCGGCAAAACGTGGCAAGG
GATGAAGGGTCCCGTGACCGTGGTGAGAGGTTTGAAAAACCGGATGTGAGGCGGTGGAACAAGCAAGAGGACCGTGGTGA
GAGGTTGGACAAGCCGGATGTGAGGCGGTGGAACAAGCAAGAGGACCGTGGTGAGAGGTTTGACAAACCGGATGTGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGAGAGGTTTGACAAGCCGGAT
GTGAGGCGGTGGAACAAGCAAGAGGACCGTGGTGAGAGGTTT--------------------------------------
----------------------------------------------------------------------AGAGGGGAGA
GGTTC---------------------------------------------------------------------------
----------------------------------------------------------AACCAGCCAGATGTAAGGCGGT
GGAACAAGCAAGAGGACTGGGGCAGGAAGACATGGAAGGAGGTAGGGGAATCGACAGTGCCAAAGATGGTTGGGGAGGGG
GTTTACGGTGTTGGGCCGGTACTTGCGGCTCTCACGGCTGGGAGGAGGGAGTTCTATGCATTGTACACACAGGAAGGAAT
GGATTTGAGCAGGAGCAACAAGAAGAAGAAGGACAAAAGGGGGATTGAGAAGGTGCTGCTGATGGCAGAGACTATCGGGC
TTAAAGTTATTGAGGCGTCAAAGCATGACCTCAACATGGTGGTGGATAACCGTCCACATCAAGGTCTGGTGCTTGATGCA
TCACCCTTGGAAATGGTGAATACTAAGGAGTTGGAACGAGTCAGGGTTCGTGGTGGCAAGGCACCAGTCTGGATAGCTTT
GGATGAGGTTATGGACCCTCAGAATTTGGGAGCCATAATTAGATCAGCCTACTTCTTTGGTGCGGAGGGTGTTGTCTTGT
GCGCTAAGAACTCTGCTCCATTAAGTGGAGTAGTGAGCAAAGCTAGTGCAGGCTCGCTTGAGTTGATTGAGCTGCTTTCG
TGTAGGAATATGATGCAGTTTCTGTCTTCATCAGCTGAAAATGGGTGGCGAGTTCTTGGTGGTACCGTCGCTCCAAAAGC
TATACCTCTCTCTGAAGTTACCACAGGGGAGCCAACAATTCTGGTGTTGGGCAGTGAAGGCACCGGTCTGAGGCCCCTGG
TTGAGCGATCCTGCACACATTTGGTCAAAATTGCTGGTAATGCTGATGGATTTGTTGTAGAAGAAGAAATAGATGCCACA
GATGCAGATATAGGGGAAGAAGGTGATAATTATTCAGGTATTCAAGATATGAAATCATTCCTTGCAGTAGAGAGCTTAAA
TGTTAGCGTGGCAGCAGGAGTTTTGCTTTATCATCTGGCTGGAAAGAATGTCCACCCTGTAACTGAGAAGCCTAGCATCT
CTCCTGTGTAAGGATGTTCCATGTTTCATCCATACCATAGTTACTAATATTTGTTTTCTTGTACTCCCATTAAGGATGAA
CTTTTGTTTCTGTTGCATGCTTTGAATTTGCTGGTTTGACTAATAATTTATTGCATAGGTGTGAGGGCAACTTCTTTGAG
AAATAGCTTATTTCACCAGGCTGAGTCAGATTCTATGC------------------ATGTTTGTTTCAAGGCTAACCATG
CCATAGCTAACCCTAGTTAATTTGTGGTTTGCCGCAGAAGTGTGGCAAAAATGTCTATGATGTATGGGCCATATGGATAA
AAAAGTGTGGCAAGTCACAGTAGCTAGGAATGTATTTTAGAAGAGAACACGGTAGCTAGAAACCAAACACACACCTGAAA
AACAGTGGCGAGCCTAAGTTAGGCGTGTCAAATTGTGTGCAGGAACAAAACAGCCCCTGGACCTGTCAATTGCAGATACA
TGATTCCGGAGCATATATTGACACCATCATATCACTTAGTACTTATTTTGGTGTAATCTGGAACACACATTAAAAGAGGA
TGACTACTGCAAGACCATCATTCTGTTGTTATCATATTTACTTACATATAACAAGCTAGTTTGTTGTGTCACTGGAAGTC
TGAAACATCTCTCTGCTAAGAGGTGAAATATTCTGCTTGATTGTTGAAGTTCATATCACGGTATCATCATTTGCTTTCAG
ACTTGATCACCGATCCTGTTGAGTGTTGAAACTTCCAATTGCAGTGTAATGTACCTTGAGCCATCAAAGCTATTTATATG
TTGGTATATCCGTATATGATTAGGTAGTACTA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTCAACTGAGCCAACAAATATGCAATTGCATTTGCAGTTTTGAACCGTAGCAACAAACTTTCTGCTTCTTTGGTG
AACTGATAAATGACCTTACTTAATTGAACGTTTCCAGCTGTTGAAGTG--GTATCCAGAATTTTTTTCTGATTAGTCTGT
TAATCCCAATTTATTGTAGTA-----AGTAAACTAAACTGACCGACCGA
>chr3D_561
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
ACATCTGGCTGTTTAGAATCATGTCAAACCGTTTGGCATGTCTAATACAGCGTAGTGATGGCTCAGCACCACTTTGAGGG
GCAAA-TGGTGTGCTTAATAAGTTTTAAAAAGGGCTATTCAGGGATAAGAATAC--------------------------
-----------------------------------ATATTATGGATTTGTGGGGGTGCTAGTGAGACAGGTGACAAATGT
ACAAAATAAAATTTGCTCGATGGCCCTAAATAAGGATCCAGTTGACAAATTAATAATGGTAAACTGTGGGGTGCCTCGCC
AAAAACTGCCCCTTTCTCATCTCAGCGCGTCATCCTCGCCGAAGCATTTCGTCGAGCGAGGGCCGCGCGCCGCCCAAAAC
CCCACATCCCAAATCAAAACCCTACGCTCCGCCGCCGCGCCATGCTCCACTCCGGCCTCTCCAAGTCCCAGCCCCTACCG
CTCCTCGCGGGAGCGTCTTCGCCTCGCCGCGCCCTCCTCGCCGGTCTCCTCCGCGCCGGGTACTTCTCTAAGTCCGCTAC
CTCCTCACCTGCGCTTCGTCCGTCCGCCACCCGTGCGAGCACCAGGGCGGCGACTACGCCGCGAGATCCCTCGCGCTTCG
GCCTGGTACATAGGGTCTCGTTCTCCACTGCACCAGATGGTTCTGATTCGGTCGGCAGCGGCGGGAGGTCGCTCCCTTGG
CTAGCCGCCGGGAGCGTCGATAGCGGCGTCCCCACCGCAAGGACTAGCGCCGGACGCTCCTCCTCGTGGGAGAGCTCCGC
TGATAAGTTCTTCTCTAAAGGCGACCACAGTGCGCGAGTAGAGACATTGGAAGATAGCGTTTCATACAAGGAGGGGGGAA
TTGGAGGGGAGGAGAATGAACCAATTGACAATCCCAAGTGGGGGCGGATTAAGGATAAGTTCCGGCGAAACGCGGCAACG
GATGAAGGGTCCCGTGACCGTGCTGAGAGGTTTGAAAAACCGGATGTGAGGCGGTGGAACAAG-----------------
-------------------------------------CAAGAGGACCGTGGTGAGAGGTTTGACAAACCGGATGTG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGGCGGTGGAGCAAGCAAGAGGACCGTGGTGAGAGGTTTGACAAGCCGGATGTGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCAGCCAGATGTAAGGCGGT
GGAACAAGCAAGAGGACTGGGGCAGGAAGACATGGAAGGAGGTGGGGGAATCGACAGTGCCAAAGATGGTTGGGGAGGGG
GTTTATGGCGTTGGGCCGGTACTTGCGGCTCTCACGGCTGGGAGGAGGGAGTTTTATGCATTGTACACACAGGAAGGAAT
GGATTTGAGTAGGAGCAACAAGAAGAAGAAGGACAAAAGGGGGATTGAGAAGGTGCTGCTGATGGCAGAAACTATCGGGC
TTAAAGTTATTGAGGCGTCAAAGCATGACCTCAACATGGTGGTGGATAACCGTCCACATCAAGGTCTGGTGCTTGATGCA
TCACCCTTGGAAATGGTGAATACTAAGGAGTTGGAACGAGTCAGGGTTCATGGTGGCAAGGCACCGGTCTGGATAGCTTT
GGATGAGGTTATGGACCCTCAGAATTTGGGAGCCATAATTAGATCAGCCTACTTCTTTGGTGCAGAGGGTGTTGTCTTGT
GCGCTAAGAACTCTGCTCCATTAAGTGGAGTAGTGAGCAAAGCTAGTGCAGGCTCGCTTGAGTTGATTGAGCTGCTTTCG
TGTAGGAACATGATGCAGTTTCTGTCTTCATCAGCTGAAAATGGGTGGCGAGTTCTTGGTGGTACCGTCACTCCAAAAGC
TATACCTCTCTCTGAAGTTACCACAGGGGAGCCAACAATTCTGGTGTTGGGCAGTGAAGGCACTGGTCTGAGGCCCCTGG
TTGAACGGTCCTGCACACATTTGGTCAAAATTGCTGGTAATGCTGATGGATTTGTTGTAGAAGAAGAAATAGATGCCACA
GATGCAGATATAGGGGAAGAAGGTGATAATTATTCAGGTAGTCAAGATATGAAATCATTCCTTGCAGTAGAGAGCTTAAA
TGTTAGTGTGGCAGCAGGAGTTTTGCTTTATCATCTGGCTGGAAAGAATGTCCACCCTGTAACTGAGAAGCCTAGCATCT
CTCCTGTGTAAGGATGTTCCATGTTTCATCCATACCATAGTTATTAATATTTGTTTTCTTGTACTCCCATTAAGGATGAA
CTTTTGTTTCTGTTGCATGCTTCGAATTTGCTGGTTTGATTAGTAATTTATTGCATAGGTGCGAGGGCAACATCTTTGAG
AAATGGCTTATTTCACCAGGCTGAGTCAGATTCTATGCTGCGTTAATATAATAGGCATGTTTGTTTCAAGGCTAACCATG
CCACAGCTAACCCTAGGTAGTTTGTGGTTTGCCGCAGAAGTGTGGCATAAATGTCTATGATGTATGGGCCATATGGATGA
AAAAGTGTGGCAAGTCACAGTAGCTAAGAATGTATTTTAGAAGAAAACACAGTAGCTAGAAACCAAACACACACCTGAAA
AACAGTGGCGCGCCTAAGTTAGGCGTGGCAAATTGTGTGCAGGAATGAAACAGCCCCTGGACCTGTCAATTGCAGATACA
TGATTCCAGAGCATATATTGACACCATCATATCACTTA---CTTATTTTGGTGTAATCTGGAACACACATTAAAAGAGGA
TGACTACTGCAAGACCATCATTCTGTTGTTATCATATTTACTTACATATAACAAGCTAGTTTGTTGTATCACTGGAA---
--------CTCTCTGCTCAGAGGTGAAATATTCTGCTTGATTGTTGGAGTTCATATCACTGTATCATCATTTGCTTTCAG
ACTTGATCACCGATCCTGTTGAGTGTTGAAACTTCCAATTGCAGTGTAATGTACCTTGAACCATCAGAGCTATTTATATG
TTGGTATATCCGTATATGATTAGGTAGTACTA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTCGATTGAGACAACACATATGCAATTGCATTTGCAGTTTTGAACCGTAGCAACAAACTTTCTGCTTCTTTGGTG
AACTGATAAATGACCTTACTTAATTGAACACTTCCAGCTGTTGCAGTGTGGTATCCAGAAAATTTCTCTGATTAGTCTGT
TAATCCCAGTTTATCGTAGTATATTTAGTAAACTAAACTGACCGAC---
>chr3B_766
--------------------------------------------------------------------------------
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----------------------------------------------TTGTGGGGGGTTCC-TGAGACATGTGACAAATGC
ACAAAAT-AAATTTGCTCGATGGCCCTAAATAAGGATCCAGTTGACAAATTAATAATGGTAAACTGTAGGGTGGCTCGCC
AAAACCTGCCCCTTTCTCATCTCAGCGCGTCATCCTCACCGAAGCATTTCGTCGAGCGAGGGCCGCGCGCCGCCCAAAAC
CCCACACCCCAAATCAAAACCCTACGCTCCGCCGCCGCGCCATGCTCCACTCCGGCCTCTCCAAGTCCCAGCCCATACCG
CTCCTCGCGGGAGCGTCTTCGCCTCGCCGCGCCCTCCTCGCCGGTCTCCTCCGCGCCGGGTACTTCTCTAAGTCCGCTAC
CTCCTCACCTGCGCTTCGTCCGTCCGCCACCCGTGCGAGCACTAGGGCGGCGACTACGCCGCGAGATCCCTCGCGCTTCG
GCCTGGGACATAGGGTCTCGTTCTCAACTGCACCAGATGGTTCTGATTCGGTCGGCGGCGGCGGGAGGTCGCTCCCTTGG
CTAGCAGCGGGGAGCGTCGATAGCGGCGTCCCCACCGCAAGGGCTAGCGCCGGACGCTCCTCCTCGTGGGAGAGCTCCGC
TGATAAGTTCTTCTCTAAAGGCGACCAAAGTGCGCGAGTAGAGACATTGGAAGATAGCGTTTCATACAAGGAGGGGGGAA
TTGGAGGGGAGGAGAATGAACCAATTGACAATCCCAAGTGGGGGCGGATTAAGGATAAGTTCCGGCGCAATGTGGCAAGG
GATGAAGGGTCCCGTGACCGTGGTGAGAGGTTTGAAAAGCCGGATGTGAGGCGGTGGAACAAG-----------------
-------------------------------------CAAGAGGACCGTGGTGAGAGGTTTGACAAGCCGGATGTG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---AGGCGGTGGAGCAAGCAAGAGGACCGTGGTGAGAGGTTTGACAAGCCGGATGTGAGGCGGTGGAACAAGCAAGAGGA
CCGTGGTGAGAGGTTTGATAAGCCGGATGTGAGGCGGTGGAACAAGCAAGAGGATCGTGGTGAGAGGTTTAGAGGGGAGA
GGTTC---------------------------------------------------------------------------
----------------------------------------------------------AACCAGCCAGATGTAAGGCGGT
GGAACAAGCAAGAGGACCGGGGCAGGAAGACATGGAAGGAGGTAGGGGAATCGACAGTGCCAAAGATGGTTGGGGAGGGG
GTTTACGGCGTTGGGCCGGTACTTGCCGCTCTCACGGCTGGGAGGAGGGAGTTTTATGCATTGTACACACAGGAAGGAAT
GGATTTGAGCAGGAGCAACAAGAAGAAGAAGGACAAAAGGGGGATTGAGAAGGTGCTGCTGATGGCAGAGACTATTGGGC
TTAAAGTTATTGAGGCGTCAAAGCATGACCTCAACATGGTGGTGGATAACCGTCCACATCAAGGTCTGGTGCTTGATGCA
TCACCCTTGGAAATGGTGAATACTAAGGAGTTGGAACGAGTCAGGGTTCATGGTGGCAAGGCACCAGTCTGGATAGCTTT
GGATGAGGTTATGGACCCTCAGAATTTGGGAGCCATAATTAGATCAGCCTACTTCTTTGGTGCGGAGGGTGTTGTCTTGT
GCGCTAAGAACTCTGCTCCATTGAGTGGAGTAGTGAGCAAAGCTAGTGCAGGCTCGCTTGAGTTGATTGAGCTGCTTTCG
TGTAGGAATATGATGCAGTTTCTGTCTTCATCAGCTGAAAATGGGTGGCGAGTTCTTGGTGGTACCGTCGCTCCAAAAGC
TATACCTCTCTCTGAAGTTACCACAGGGGAGCCAACAATTCTGGTGTTGGGCAGTGAAGGCACCGGTCTGAGGCCCCTGG
TTGAGCGCTCCTGCACACATTTGGTCAAAATTGCTGGTAATGCTGATGGATTTGTTGTAGAAGAAGAAATAGATGCCACA
GATGCAGATATAGGGGAAGAAGGTGATAATTATTCAGGTAATCAAGATATGAAATCATTCCTTGCAGTAGAGAGCTTAAA
TGTTAGTGTGGCAGCAGGAGTTTTGCTTTATCATCTGGCTGGAAAGAATGTCCACCCTGTAACTGAGAAGCCTAGCATCT
CTCCTGTGTAAGGATGTTCCATGTTTCATCCATACCATAGTTACTAATATTTGTTTTCTTGTACTTCCATTAAGGATGGA
CTTTTGTTTCTGTTGCATGCTTTGAATTTGCTGGTTTGACTAATAATTTATTGCATAGGTGTGAGGGCAACTTCTTTGAG
AAATGGCTTATTTCATCAGGCTGAGTCAGATTCTATGCTGCGTTAATATAATAGGCATGTTTGTTTCAAGGCTAACCATG
CCACAGCTAACCCTAGTTAATTTGTGGTTTGCCGCAGAAGTGTGGCAAAAATGTCTATGATGTATGGGCCGTATGGATAA
AAAAGTGTGGCAAGTCACAGTAGCTAGGAATGTTTTTTAGAAGAAAACACAGTAGCTAGAAACCAAACACACACCTGAAA
AACAGTGGCGAGCCTAAGTTAGGTGTGGCAAATTGTGTGCAGGAACAAAACAGCCCCTGGACCTGTCAATTGCAGATACA
TGATTCCCGAGCATATATTGACACCATCATATCACTTAG---TTATTTTGGTGTAATCTGGAACACACATTAAAAGAGGA
TGGCTACTGCAAGACCATCATTCTGTTGTTATCGTATTTACTTACATATAACAAGCT-GTTTGTTGTGTCATTGGAAGTC
TGAAACATCTCTCTGCTCAGAGGTGAAATATTCTGCTTGATTGTTAAAGTTCATATCACTGTATCATCATTTGCTTTCAG
ACTTGATCACCGATCCTGTCGAGTGTTGAAAATTCCAATTGCAATGTAATGTACCTTGAGCCATCAAAGCTATTTATATG
TTGGTATATCCGTATATGATTAGGTAGTACTACCTCCGTCCTGGTTTATTGGTCCCCTTCGTATTTTTTGTCAAATTTTG
ACCTCAGATTTCACTAACAAAATAATAATGCATGTCATAAAAAATTATATCATTTGAAACTATGTTCAAATATAAAATGC
ATTAATATTTTGTTAGTTAAATCTCTAGTAAAAATTTGGCACAAAATACGAAGGGGACCAATAAACCAGGACGGAGGTAG
TACTAGTCAACTGAGACAACACATGTGCAATTGCATTTGCAGTTTTGAACCGTAGCAACAAACTTTCTGCTTCTTTGGTG
AACTGATAAATGACCTTACTTAATTGAACACTTCCAGCTGTTTCAGTG--GTATCCAGAATTTTTTTCTGATTAGTCTGT
TAATCCCAGTTTATTGTAGTA----------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
----------S----S----S-------------------------------S-----S--S--S--S------------
-SS--S--------------------S----------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---------------------------------------
--------------------------------S-------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------------------S----------------------
----------S---------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
----------------------S-------------------------------------------S-------------
---------------------------------------------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS----------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S--------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
----------------------------------------S---------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------S-----S-----------------------------
---------------------------S----------------------------------------------------
-------S-------------------------------SS---------------------------------------
--------------------------------------------------------------------------------
-----------------S-----------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----S----------------------------------------------------------
-----------------------------SS------------S------------------------------------
--------S-------------------------------------SSS
>forward_153
--------------------------------------------------------------------------------
-----------------------------------------------------GCTGACAGGTGCAACATTGG-------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_1980
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GAGAGGTTTGACAAGCCGGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_1612
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CGTGGTGA
GAGGTTGGACAA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_3207
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------CGTGGCAGCAGGAGTTTTG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_2690
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGGAACGAGTCAGGGTTCG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_4430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------GTTTCCAGCTGTTGAAGTGGT------------------------------
-------------------------------------------------
