>input_sequence_38728
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---------------------------------------------------------ATGGATTTGAGCAACGGCTCACC
GGTCATCAGTGATCCGATGGCAATGAGCCAGTCGTTGATGGGAGTGCTGCCTTCCAACATGATGCCGTTTTCAGTCAGGC
CCGGGGGTTACTCCGGCGCTGGTGGCGCCGGCGTAAACGTCAGCAGGCGCAAGATCGAGGAGGTCCTCGTGAGCGGGCTG
CTGGATGCCATGAAATCCTCGTCGCCACGTAAGAAGCACAACGTGGTCTTCGGCCAGGAAAACCTGCCTGAAGAAGATCC
TGCCTACAGTGCATGGATGGTAAGAAGATTGACTTATTGAGCCGTAGTCTAGTTACA--------------ATGCCTCTT
CTGAAGAAAT--TTACAGATATGCGTCTTGTGCTGCAGGCAAAATGCCCCTCTGCTCTGGCTTCCTTCAAGCAGATCGTA
GCCAGTGCACAAGGCAAGAAGATTGCGGTCTTCTTGGACTACGATGGCACACTGTCGCCGATCGTCGACGACCCTGAAAA
AGCCGTCATGTCCCCTGTGGTAAATCAGAATAACCTGCTTAAACTA---GTAACATTTCTTGGTTATCAACCGATGAGCA
CCTGCTTATAGTTGTCCCAAAAACTTTTTCTCACCTTAGATGAGAGCTGCTGTGAGAAACGTCGCCAAATACTTCCCCGC
CGCCATCGTCAGCGGAAGGTCCCGGAAGAAGGTACTGATGACTA--------TACTAACTCTTTGCACATGTCACCTGTA
CTGATATCAGAATCCTCCCCAGTGATATGCAATTGTATGCCTGATTAATTTGATATATGCATGTTGGATATCAGAATCCT
AGTGATATGTTATTAATGCCTGATTAATTTGATGGTTTCACTCTGATTTATGCAGGTTCTTGAATTCGTAAAACTGAAGG
AACTCTGCTATGCTGGAAGTCATGGGATGGACATAATGACATCTTCTTCAGCACATTATGAACACAATACTGAAAAGGTG
AGCATTTCCTGCTCATTTGTTTCAGAGATGATAACATTCCCGGTCTTTTCGCATAAACAAAAATATGTTATTATTGCAAT
TCTTACGGTTCCTGAACTCTACTTGTAGGGCAAAGAAGCCAACCTCTTCCAACCTGCTCGCGATTTTCTGCCTATGATCG
ATGAGGTGCGCTTCTTCTTACTTAACTCTGATGAAGCTGACAAACTGTAATACTTTAGTCGACTGGAC------AGCTGA
AACTTCAGAAAATGACAGGGATTCCATTCATGCAAAGTTCAGTGATTCTTGTGTTGTAC--------TAATGGGTATTTT
CGGCAACAGGTTTCCAAGGCCCTCTTGGAAGTCACGAGCGGAATCGAAGGCGCGAGCGTTGAGGACAACAAGTTCTGCGT
GTCTGTTCATTACCGCAACGTAGACGAGAAGGTAAAAA-GAAACCCTGCGCCTCAAGCACTGGAT----GCTCTGTTTTG
CCTCTTCTCTCGGTCTCTCCTTCCATGGACGGCATGCACCTGCACTGCAGATTCGCCTGACAGTTTTGCCCGCTTGCTGA
TCGCAGGACTGGGAGCTGGTCGCACGGCTCGTAAACGAGGTGCTGGAGGACTTCCCCGCTCTCAAAGTGACCAACGGGCG
AATGGTTTTAGAGGTTCGTCCGGTGATCGACTGGGACAAGGGGAAGGCCGTCGAGTTCCTGCTTCAGTCGCTCGGGCTGA
GCGACTCCGAGAACGTGATCCCCATCTACATCGGCGACGACCGCACCGACGAAGACGCGTTCAAGGTTCCCATTTCTTTC
TCCGGCAGCTGTGCAGTCCATTCAGATCTTTGATCCAATTGTAAACTGTAAGCTCATGGTTTTCTTCCCCGTTGGTTCCA
TCAGGTGCTTCGGGAGAGGAACTGCGGATACGGGATACTGGTCTCGCAGGTGCCCAAGGAAACCGAAGCCTTCTACTCGC
TCAGGGACCCGTCTGAAGTAAAGCTCTTTCTAGTTTTATTGTGCTCTGCTCCTGCTGGCTCTGTTCAGCGAGTGGATTCC
T----GATCGTTTGGTTCTCGTGCAGGTGATGGAGTTCCTGAACTCCTTGGTGAGGTGGAAGAAGCACTCGCTATGA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr6D_1_TraesCS6D01G230500
AACCTGCTGTAACCTGACGTTCTCATGCTTCCATCATAGCTTGGTTACAACACAGGAGCTGACGTTCTTACGCTTCGGTC
ATGGCTTATAGCGGTACAATTGATTTCTTCAGATTCGCGCCTCTCGCAATTTAATCGCGCTAAACTTGCGTACAGAATAT
AGATGCGTTAGGTTTACCTACCGTTCTTAAGTTCAGAAG--CAGAAACAGAAACACTCACCAGGGCATTAACACCTGGGC
CAGAGCACACATGGCATCAGACATCAGTGATTGGGTCGGCATATCATTGCAGATGTTTATATTCTTTCAGAAAATGTTAA
TAGTACAAGGTTAAGCATCATATTTCTTTTGGCAAT----TAGTTTACCGTACCTTAACCATGGTTAAGGCCAACCCAGC
TATCTGCAAGTTTTTACTTTGACATTTTCCCTTTTCTTTCTGCTTTTTCTGGATGTTGTTTTCTTCCTCTATCACGATAG
AGACACAGATTTAACATGGCTTGACACTTGATCCATGTGTGGTTGTCGACGTCATGGAAGTAACAGC-CTGCTATTTGGT
CTTTCCGGGTAACTGAAAAGATCCTCTTCTTCTTG-ATGCGTGCAGTGACACCTTCTGAACATCGGAGTTTTTTCGGAAA
GGAAGTTGAAACCTCAGCCTCTGCATCATTCTGAACATTGGAGTT-AACGGAGCTGGCTTTGCATGGCTTTTCCTATGTG
CCAATCCAGTCTTGTGATATAGATGTGTCATCTCTCTCTGCATGACAAGGTAAAT--------ATCATCCTGAATTACCT
TCCCTTTTCTCATGGAGCAGACGCCCTTTCCCTAACGCCATCCTACCTTCTGTCCTCAGTTCTCAGGTACTCTTCTGTTG
ATGAACTTCCTCCACACCTGCAGTGACAAGAAAACGCTGAAGAAGTGGTTCTTCATCGACAAGACAGTGGGCTAAGAAAA
TCCAGCTGAAAGAGAGACGACCGCCGTACCGAGCACACTTTTTCTTCGTCCGACCCGATGGATTTGAGCAACGGCTCACC
GGTCATCAGTGATCCGATGGCAATGAGCCAGTCGTTGATGGGAGTGCTGCCTTCCAACATGATGCCGTTTTCAGTCAGGC
CCGGGGGTTACTCCGGCGCTGGTGGCGCCGGCGTAAACGTCAGCAGGCGCAAGATCGAGGAGGTCCTCGTGAGCGGGCTG
CTGGATGCCATGAAATCCTCGTCGCCACGTAAGAAGCACAACGTGGTCTTCGGCCAGGAAAACCTGCCTGAAGAAGATCC
TGCCTACAGTGCATGGATGGTAAGAAGATTGACTTATTGAGCCGTAGTCTAGTTACA--------------ATGCCTCTT
CTGAAGAAAT--TTACAGATATGCGTCTTGTGCTGCAGGCAAAATGCCCCTCTGCTCTGGCTTCCTTCAAGCAGATCGTA
GCCAGTGCACAAGGCAAGAAGATTGCGGTCTTCTTGGACTACGATGGCACACTGTCGCCGATCGTCGACGACCCTGAAAA
AGCCGTCATGTCCCCTGTGGTAAATCAGAATAACCTGCTTAAACTA---GTAACATTTCTTGGTTATCAACCGATGAGCA
CCTGCTTATAGTTGTCCCAAAAACTTTTTCTCACCTTAGATGAGAGCTGCTGTGAGAAACGTCGCCAAATACTTCCCCGC
CGCCATCGTCAGCGGAAGGTCCCGGAAGAAGGTACTGATGACTA--------TACTAACTCTTTGCACATGTCACCTGTA
CTGATATCAGAATCCTCCCCAGTGATATGCAATTGTATGCCTGATTAATTTGATATATGCATGTTGGATATCAGAATCCT
AGTGATATGTTATTAATGCCTGATTAATTTGATGGTTTCACTCTGATTTATGCAGGTTCTTGAATTCGTAAAACTGAAGG
AACTCTGCTATGCTGGAAGTCATGGGATGGACATAATGACATCTTCTTCAGCACATTATGAACACAATACTGAAAAGGTG
AGCATTTCCTGCTCATTTGTTTCAGAGATGATAACATTCCCGGTCTTTTCGCATAAACAAAAATATGTTATTATTGCAAT
TCTTACGGTTCCTGAACTCTACTTGTAGGGCAAAGAAGCCAACCTCTTCCAACCTGCTCGCGATTTTCTGCCTATGATCG
ATGAGGTGCGCTTCTTCTTACTTAACTCTGATGAAGCTGACAAACTGTAATACTTTAGTCGACTGGAC------AGCTGA
AACTTCAGAAAATGACAGGGATTCCATTCATGCAAAGTTCAGTGATTCTTGTGTTGTAC--------TAATGGGTATTTT
CGGCAACAGGTTTCCAAGGCCCTCTTGGAAGTCACGAGCGGAATCGAAGGCGCGAGCGTTGAGGACAACAAGTTCTGCGT
GTCTGTTCATTACCGCAACGTAGACGAGAAGGTAAAAA-GAAACCCTGCGCCTCAAGCACTGGAT----GCTCTGTTTTG
CCTCTTCTCTCGGTCTCTCCTTCCATGGACGGCATGCACCTGCACTGCAGATTCGCCTGACAGTTTTGCCCGCTTGCTGA
TCGCAGGACTGGGAGCTGGTCGCACGGCTCGTAAACGAGGTGCTGGAGGACTTCCCCGCTCTCAAAGTGACCAACGGGCG
AATGGTTTTAGAGGTTCGTCCGGTGATCGACTGGGACAAGGGGAAGGCCGTCGAGTTCCTGCTTCAGTCGCTCGGGCTGA
GCGACTCCGAGAACGTGATCCCCATCTACATCGGCGACGACCGCACCGACGAAGACGCGTTCAAGGTTCCCATTTCTTTC
TCCGGCAGCTGTGCAGTCCATTCAGATCTTTGATCCAATTGTAAACTGTAAGCTCATGGTTTTCTTCCCCGTTGGTTCCA
TCAGGTGCTTCGGGAGAGGAACTGCGGATACGGGATACTGGTCTCGCAGGTGCCCAAGGAAACCGAAGCCTTCTACTCGC
TCAGGGACCCGTCTGAAGTAAAGCTCTTTCTAGTTTTATTGTGCTCTGCTCCTGCTGGCTCTGTTCAGCGAGTGGATTCC
T----GATCGTTTGGTTCTCGTGCAGGTGATGGAGTTCCTGAACTCCTTGGTGAGGTGGAAGAAGCACTCGCTATGAACA
AACAGGAGATGAC--TAGTTTCCGAGGCGACAGTTTTGCAGCGCTGGAAACCGTAGCTAGGGTCGAATGATGTTGCCGTC
CCCTGTTAATTCGTTTAGGTTGATTGATATTCTTGTACTGCTAGTCATGTTCTTTGCCACCGAGAAATTTGATCGGTGGC
TGTGTTGGTCTCTTGACATTGTATTTCGCAAGCAAG--ATAGGCCTTTTCCCTCGCCTTCAATGCTGATAAATAAACTGG
AGCCCCACCTTTCCTGTCGATGTTCCCTGTTCGTATTGTTTTTTTAGTGAGTTCCAGTTTCTACCCACTAATTAGCAGTT
TTGATTCCCCACAAATAAAATTAGTCCTAAAGATGCCACAATAAATTTGAATCAGAAGAAGTAACAGTTTTGACACTGAT
TGGCGCTCATCCATCTTTCAGAAATTGCGTGTGCCGCTAATAATCATTTTGACGGCAGCATGTGATATTGACAAGAGTAG
ACGTCCATCACCCTGCCGCCATGAAATCATGTAGAAGAGGCACTCTCCGCATCTAAAGGTGGTAGCCTAGCGCTTCATGT
TTCCATTGACTGTTATAACAGCGCGTGGTCCAGACATCTTGTGTTTGAGGAGATAGGCATAGTGCGGGATCGCATTAAAG
CGAGCGAACGCGGTTCGTCCGAGTAGTGCATGATAGCCACTGCGGAAAGGGACGATGTCGAAGATCAAGTCTTCGCTTCG
GAAGTTGTCTGGCGAGCCGAAGACGACTTCCAATGTGATTGAGCCCGTGCAGCGGGCCTCTACACCAGGTATTACTTCTT
TAAAGGTAGTTTTGGTGGGCTTGACTCTTGACGGATCAATACCCATTTTGCGGACTGTGTCCTGATAGAGCAGGTTAAGG
CTGCTGCCGCCGTCCATGAGGACTCGCGTGAGGTGGAATCCATCAATAATTGGATTGACGGATACTGGTCGGATGGTCTC
TGCGATCGAAAGTGATCGGACAGGCTGACCATGGGTTGAAT
>chr6A_1
AACCTGCTGTAACCTGACGTTCTCATGCTTCCATCATAGCTTG--------------------GTTCTTATGCTTCGGCC
ATGG--TATAGCGGCGCAATCGCTCTTCTCATATTCGCGCCTCTGGCAATTTAATCGCGCTGAACTTGCGTACAGAACAT
AGATGCGTTAGGTTTACCTACCGTTCTTAAGTTCAGAGG--CAGAAACAGAAACACTCACCAAGGCATTAACACCTGGGC
CAGAGCACACATGGCATCAGACATCAGTGATTGGGCCGGCATATCATTGCAGATGTTTATATTCTTTCAGAAAATGTTAA
TAGTACAAGGTTAAGTATCATATTTCTTTTGGCAATTGAGTAGTTTACCGTACCTTAACCATAGTTAATGCCAACCCAGC
TATATGCAAGTTTTTACTTTGACAGTTTCCCTTTTCCTTGTGCTTTTCCTGGATGTTGTTTTCTTCCTCTATCACGATAA
CGACACAGATTTAACATGGCTTGACACTTGATCCATGTGTGGTTGTCGACGTCGTGCAAGTAACTAGTCTGCTATTTGAA
CTTTCCGGGTAACTGAAAAGGTCCTCTTGTTGATTAATTCGTGCAGTGACACCTTCTGAACAACGGAGTTTTCTCGAAAA
GGAGGTTGAAGCCCGGGCCTCTGCATCATTCTGAACATTGGAGTAAAACGGAGCTGGCTTTGCATGGCTTTTCCTATGTG
CCAATCCACTCTTCTGATATAGATGTGTCATCTCTCTCAGCATGACAAGGTACTGTACTACAAATCATCCCGAATTACCT
TCTCTTTTCTCATGGAGCAGACGCCCTTTGCCTAACGCTATGCTGCCTTCTCTCCTCAGTTCACAGGTACTCTGCTTTTG
ATGAACTTCCTCCACACCTGCAGTGACAAGAAAACGCTGAAGAAGTGGTTCTTCATCGACAAGACAGTGGGCTAAGAGAA
TCCAGCTGAAAGAGAGACGACCGCCGTTCTGACCACATTTTTTCCTCGTCCCACCCGATGGATTTGAGCAACGGCTCACC
GGTCATCAGTGATCCGATGTCAATGAGCCAGTCGTTGATGGGAGTGCTGCCTTCCAACATGATGCCGTTTTCAGTCAGGC
CCGGAGGTTACTCCGGCGCTGGTGGCGCCGGCGTAAACGTCAGCAGGCGCAAGATCGAGGAGGTCCTCGTGAGCGGGCTG
CTGGATGCCATGAAATCCTCGTCGCCGCGTAAGAAGCACAACGTGGTCTTCGGCCAGGAAAACCTGCCCGAGGAAGATCC
TGCCTACAGTGCATGGATGGTAAGAAGATTGACTTAGTGAGCAGTAGTCTAGTTACT-------------TATGCCTCTT
CTGAAGAAAGACTTACAGATATGCGTCTTGTGCTGCAGGCCAAATGCCCCTCTGCTCTGGCTTCCTTCAAGCAGATCGTA
GCCAGTGCACAAGGCAAGAAGATTGCTGTGTTCCTGGACTACGATGGCACCCTGTCGCCGATCGTCGACGACCCTGAAAA
AGCCGTCATGTCCCCTGTGGTATGTCAGAAAAACTTGCTTAAACTA---GTAACACTTCTTGGTTGTCAACAAATGAGCA
CCTGCTTATAGTTGTCCCAAAAACATTTTCT--CCTTAGATGAGAGCTGCTGTGAGAAACGTCGCCAAGTACTTCCCCGC
CGCCATCGTCAGTGGAAGGTCCCGGAAGAAGGTACTGATGACTA--------TACTAACTCTTTGCACATGTCACCTGTA
CTGATATCAGAATCCTCCCCAGTGATATGCAATTATATGCCTGGTTAATATTATATATGCATGTTTGATATCAGAATCCT
AGTGATATGCAATTAATGGCTGGTTAATTTGATAGTTTTATTCCAATTTATGCAGGTTCTTGAATTCGTAAAACTGAAGG
AACTCTGCTATGCTGGAAGTCATGGGATGGACATAATGACATCTTCTTCAGCACATTATGAACACAATGCTGAAAAGGTG
AGCATTTCCTGCTCATTTGTTTCAGGGATGATAAAATCCACTGTCTT----------------------ATGCGCGCAAT
ACTCACAATTTCTTAACTCTACTTGTAGGGCAAAGAAGCCAACCTCTTCCAACCTGCTCGCGATTTTCTGCCTATGATCG
ATGAGGTGCGCTCCTTCTTATTTAACTCTGATGAAGCTGACAAACTGTAATACTTTAGTCGACTGGAC------AACTGA
AACTTCAGAAGATGACAGGGATTCCATTCATGCAAAGCTCAGTGATTCTTGTGTTGTACGTACGTATTAATGGGTATTTT
TCGCAACAGGTTTCCAAGGCCCTCTTGGAAGTCACGAGAGGAATCGAAGGCGCGAGCGTTGAGGATAACAAGTTCTGCGT
GTCTGTTCATTACCGCAACGTAGACGAGAAGGTAAAAAAGAGACCCTGCGCCTCGAGCACTGGAC----GCTCTGTTTTG
CCTCTTCTCTCGGTCTCTCCTCCCATGGACGGCA---------------GATTCGCCTGACAGTTTTGCCTGCTTGCTGC
TCGCAGGACTGGGAGCTGGTCGCACGGCTCGTAAACGAGGTGCTGGAGGATTTCCCCACTCTCAAAGTGACCAACGGGCG
AATGGTTTTAGAGGTTCGTCCGGTGATCGACTGGGACAAGGGGAAGGCCGTCGAGTTCCTGCTTCAGTCGCTCGGCCTGA
GCGACCCCGAGAACGTGATCCCAATCTACATCGGCGACGACCGCACCGACGAAGACGCGTTCAAGGTTCCCATTTCTTTC
TCCGGCAGCTGTGCAGTCCATTCAGATCTTTGATCCAATTGTAAACTGTAAGCTCATGGTCTTCTTCCCCGTTGGTTCCA
TCAGGTGCTCCGGGAGAGGAACTGCGGGTACGGGATACTGGTCTCGCAGGCGCCCAAGGAAACCGAAGCCTTCTACTCGC
TCAGGGACCCGTCTGAAGTAAAGCTCTTTCTAGTTTTCTTGTGCTCTGCTCCTGCTGGCTCTGTTCAACGAATGGATTCC
TGATCGATCGTTTGGTTCTCGTGCAGGTGATGGAGTTCCTGAACTCCTTGGTGAGGTGGAAGAAGCACTCGCTATGAACA
AACGGGAGATGACTGTAGTTTCCGAGGCGACAGTTTTGCAGCGCTGGAAACCGTAGCTAGGGTCGAATGATGTCGCCGTC
CCCTGTTAATTCGTTTAGGTCGATTGATATTCTTGTACTGCTAGTCATGTTCTTTGCCACCGAGAAATTTGATCGGTGGC
TGCGTTGGTCTCTTGACATTGTAATTCGCAAGCAATATATAGGCCTTTTCCCTCGCGTTCAATGCTGATAAATAAA----
--------------------------------------------------------------------------------
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-----------------------------------------
>chr6B_1
AACCTGCTGTAACCTGACGTTCTCATGCTTCCATCATAGCTTGGTTACAACACAGGAGCTGACGTTCTTATGCTTCGGTC
ATGGCTTATAGCGGCGCAATCGCTCTTCTCATATTCGCGCCTCTGGCAATTTAATCGCCCTAAACTTGCGTACAGAATTT
AGATGCGTTAGGTTTACCTACCGTTCTTAAGTTCAGAAGCACAGAAACAGAAACACTCACCAAGGCATTAACACCTGGGC
CAGAGCACACATGGCATCAGACATCCGTGATTGGGCCGGCATATCATTGCAGATGTTTATATTCTTTCAGAAAATGTTAA
TAGTACAAGGTTAAGTATCATATTTCTTTTGGCAAT----TAGTTTACCGTACCTTAACCATAGTTAAGGCCAACCCAGC
AATCTGCAAGTTTTTACTTTGACATTTTCCCTTTCCCTTCTGCTTTTTCTGGATGTTGTTTTCTTCCTCTATCACGATAA
CGACACAGATTTAACATGGCTTGACACTTGATCCATGTGCGGTTGTCGACGTCGTGGAAGTAACTAGTCTGCTATTTGAT
CTTTCCGGGTAACTGAGAAGATCCTCTTGTTGGTTAATTCGTGCAGTGACACCTTCTGAATATCGGAGTTTTTTCGAGAA
GGAGGTTGAAACCCCGGCCTTTGCATCATTCTGAACATTGGAGTTAAACGGAGCTGGCTTTGTATGGCTTTTCCTATGTG
CCAATCCAGTCTTGTGATATAGATGTGTCATCTCTCTCAGCATGACAAGGTACT-----ACAAATCATCCCGAATTACCT
TCTCTTTTCTCATGGAGCAGACGCCCTTTGCCTAACGCTATCCTACCTTCTCTGCTCAGTTCACAGGTATTCTGCTTTTG
ATGAACTTCCTCCACACCTGCAGTGACAAGAAAACGCTGAAGAAGTGGTTCTTCATCGACAAGACAGTGGGCTAAGAAAA
TCCTGCTGAAAGAGAGACGACCACCGTACTGACCACACTTTTTCTTCGTCCGACCCGATGGATTTGAGCAACGGCTCACC
GGTCATCAGTGATCCGATGTCAATGAGCCAGTCGTTGATGGGAGTGCTGCCTTCCAACATGATGCCGTTTTCAGTCAGGC
CCGGAGGTTACTCCGGCGCTGGTGGCGCCGGCGTAAACGTCAGTAGGCGCAAGATCGAGGAGGTCCTCGTGAGCGGGCTG
CTGGATGCTATGAAATCCTCGTCGCCACGTAAGAAGCACAACGTGGTCTTCGGCGAGGAAAACTTGCCTGAAGAAGATCC
TGCCTACAGTACATGGATGGTAAGATTTTTCATGATTCCTTTTTGGGTGACGTACTACTAGTAGTACTAGTATGCCTCTT
CTGAAGAAAGACTTACAGATATGCCTCTTTCGTTGTAGGCAAAATGCCCTTCTGCTCTGGCTTCCTTCAAGCAGATCGTA
GCCAGTGCACAAGGCAAGAAGATTGCGGTCTTCTTGGACTACGATGGCACCCTGTCTCCGATCGTCGACGACCCTGAAAA
AGCCGTCATGTCCCCTGTGGTAAATCAGAATAATCTGCTTAAACTACTAGTAGCAATTCTTGGTTATCAACAAATGAGCA
CCTGCTTATAGTTGTCCCATAACATTTTTCTCTTCTTAGATGAGAGCTGCCGTGAGAAACGTCGCCAAGTACTTCCCTGC
TGCCATCGTCAGCGGAAGGTCCCGGAAGAAGGTATTGATAACTATATGAAGTTACTAACTCTTTGCACATGTCA-CTGTA
CTGATATCAGAATCCTCCCCAGTGATATGCAATCATATGCCTGATTAATTTGATATATGCATGTTTGATTTCAGAATCCT
ATTGATATGCAATTAATGCCTGGTTAATTTGATAGTTCCATTCCAATTTATGTAGGTTCTTGAATTCGTAAAACTGAAGG
AACTCTGCTATGCTGGTAGTCATGGGATGGACATAATGACATCTTCTTCAGCACATTATGAACGCAATGCTGAAAAGGTG
AGCATTTCCTGCTCATTTGTTTCAGAGATGATAAAATTCACTGTCTTTTCGCATAAACACAAATATGATATGCGTGCAAT
ACTGACGGTTCCTTAACCCTACTTGTAGGGCAAAGAAGCCAACCTCTTCCAACCTGCTCGCGATTTTCTGCCTATGATCG
ATGAGGTGCGCTTTTTCTTATTTAACTCTGATGAAGCTGACAAACTGTAATACTTTAGTCGACGGGACAACTGAAACTGA
AACTTCAGAAAATGACAGGGATTCCATTCATGCAAAGTTCAGTGGTTCTTGTGTT--------GTATTAATGGGTATTTT
TCGCAACAGGTTTCCAAGGTCCTCTTGGAAGTCACGAGCCGAATCGAAGGCGCAAGCGTTGAGGACAACAAGTTCTGCGT
GTCTGTACATTACCGCAACGTGGACGAGAAGGTAAAAA-----CCCTGCGCCTCAAGCACTGGACTGATGCTCCCTTTTG
CCTCTTCTCTGGGTCTCTCCTTCCATGGATGGCATGCAC-----CTGCAGATTCGCCTGACAGTTTTGCC-------TGA
TCGTAGGACTGGGAGCTGGTCGCACGGCTCGTAAACGAAGTGCTGGAGGACTTCCCCCGTCTCAAAGTGACCAACGGACG
AATGGTTTTAGAGGTTCGTCCAGTGATCGACTGGGACAAGGGGAAGGCCGTCGAGTTCCTGCTTCAGTCGCTCGGGCTGA
GCGACTCCGAGAAAGTGATCCCTATCTACATCGGCGACGACCGCACCGACGAAGACGCGTTCAAGGTTCCCATTTCTTTC
TCTGGCAGCTGTGCAGTCCATTCGGATCTTTGGCCCGGCTGTAAACTGCAAGCTCATGGTCTTCTTCCCC-TTGGTTCCA
TCAGGTGCTTCGGGAGAGGAACTGCGGATACGGGATACTGGTCTCGCAGGCGCCCAAGGAAACCGAGGCCTTCTACTCGC
TCAGGGACCCGTCTGAAGTAAAACTCTTTCTAGTTTTTGTGTGCTCTGCTCCTGCTGGCTCTGTTCAAAGAATGGATTCC
T----GATCGTTTGGTTCTCGTGCAGGTGATGGAGTTCCTGAACTCCTTGGTGAGATGGAAGAAGCACTCGCTATGAACA
AACAGGAGATGACTGTAGTTTCCGAGGCGACAGTTTTGCAGCGTTGGAAACCATAGCTAGGGTCGAATGATGTTGCCGTC
CCCTGTTAATTCGTTTAGGTCGATTGATATTCTTGTACTGCTAGTCATGTTCTTTGCCACTGAGAAATTTGATCGGTGGC
TGTGTTGGT-----------------------------------------------------------------------
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-----------------------------------------
>SNPs
----------------------------------------------------------------------S---------
--------------SS----S-S-S-SS---S------------S-----------------------------------
--------------------------------------------------------------S-----------------
-----------------------------------S--------------------------------------------
---------------S----------------------------------------------S-----------------
------------------------------------S------------------------------------------S
S----------------------------------------------------S----------SSS-----------S-
----------------------------S--SS-S---S-------------------------------------S---
---S---------S-S----------------------------------------------------------------
--------------------------------------S-------------SSS---------------S---------
--S--------------------------S--------S------------S----------S----------S--S---
--------------------------------------------------------------------------------
-----------------------------S--S-----------------------------------------------
-------------------S------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------------------------S---------------SS-------
--------------------------------S-----------------------------------S-----------
--------------------------------------------------------------------------------
----------------------------------S------------------------------S--------------
---------SS-----------S----------S------S--SS-----------------------------------
--------------------------------------------------------------------S-----------
----------------------------------S----S-S-----------------S-------S---SSS------
S--S---------S------------------------------------------------------------------
--------------------S------------------------------------------------------S----
--------------------------------------------------------------------------------
SS------------------------------------------------------------------------------
-----------------------------------------S----------------------S---------------
---------------------------------------SSSSS--------------------------S---------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------S-----------------------------
-------------------------------------S-----------------------------S---S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
-----------------------S-----------S--------------------S-------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_95
---------------------------------------------------------------------------CGGTC
ATGGCTTATAGCGGT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>reverse_1060
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GCAATGAGCCAGTCGTTGAT-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------
>forward_125
--------------------------------------------------------------------------------
-------------------------TCTTCAGATTCGCGCCTCTC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------
>reverse_2035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CATTCCCGGTCTTTTCGCAT--------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------
>forward_534
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ATGTGTGGTTGTCGACGTCA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>reverse_2524
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------ACTGCAGATTCGCCTGACAG-----------------
--------------------------------------------------------------------------------
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-----------------------------------------
>forward_1669
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------CTGTGAGAAACGTCGCCAAA-----------
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-----------------------------------------
>reverse_3511
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----------------------------------------------------------------------TGACACTGAT
TGGCGCTCAT----------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------
