>input_sequence_38708
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------------------------------------------------------------ATGCTGGCCGCCGCCGCCTC
CGTGAAGTTCTCCCCGGCGTCCGCCGGTACCAGTAGCACCACCAAGTTGGCCTTCAAGCCTGTCCACCTCCCTTTCCTCC
CCAACGCCGTCCCGCGTCCCCTCTCCCTCTCGGCGCGTCCTCTGTACCGCCAGGAGCCGTTCCTGGCGGCGGCCCGCAAC
GACCGTGCCGCGTCAACGGCGCCCCCTGCAGCCACCGCGGATGGCGCGCGGCCGGTGGAGACGGCGGCCGCGCCGGAGGC
CGCGAAGAGCGCCAAGATCGGGGTCTACTTCGCCACGTGGTGGGCGCTGAACGTGATCTTCAACATATACAACAAGAAGG
TGCTGAATGCGTTCCCGTACCCGTGGCTCACGTCGACCCTGTCCCTGGCCGCCGGCTCCGCCATCATGCTCGTGTCCTGG
GCCACCAGGATCGCCGAGGCGCCCCAGACGGACCTCGATTTCTGGAAGGCTCTCTCTCCGGTGAGCGTCCTGCGCACGCG
TGGCTTCTTGGCGCGCTCTGTTCTTGCCAATCTCACCGGCACGTACGTCTTCTCGATGTGCTGATGCTTGTGTGTTG-GG
AATTTT-TTGATTTTTGCGTCCGAGCAGGTGGCGATTGCGCACACGATCGGGCACGTGGCGGCGACGGTGAGCATGGCGA
AGGTGGCCGTGTCCTTCACGCACATCATCAAGAGCGCGGAGCCGGCGTTCAGCGTGCTCGTCTCGAGATTCTTCCTCGGC
GAGCACTTCCCGTTGCCGGTCTACTTCTCCCTCCTCCCGATCATAGGTGGATGCGCTCTCGCGGCCGTCACCGAGCTCAA
TTTCAACATGATTGGTGAGG---------ACTCCCA-TTTTGTTGAACCTTGAAATTACCTCCAGCAGGTACCACC---A
CATAAGAAATATCGTCACTTTTGCTAGTAC--ACAACAGATATTTTTCAGTAGTA----CTCCATTTACGAAGAACCTTA
ACTGTCCACAAGTCCTGAGGTCTATAATTTAGCACGTATA--TTGTACCAAAAGCTTTGTCTTTGATGTCAAAATTGGAC
AACGTTGTACTTTTGGGTACGACTTTGGTATCGGTCCTTGAAAGTAGGCGGTTTAATTGAACATTATATAGATTTCGTTT
GACACTGTTGATTCTGATGATACCACGTGTGCTCAATTCACTGTAGGATTCCTGGGGGCGATGATCTCCAACCTGGCTTT
TGTGTTCCGGAACATATTCTCCAAGAAAGGGATGAAGGGCAAGTCGGTGAGCGGGATGAACTACTATGCCTGCCTCTCCA
TGCTGTCCCTGGTGATCCTCCTCCCTTTCGCCTTCGCCATGGAGGGCCCCAAGGTGTGGGCTGCAGGCTGGCAGAATGCA
GTCGCCGAGATCGGTCCCAACTTCGTCTGGTAAGCTCCA--TCACAGCACGTGACTGCTTGCCAGTTCGCTGTCATAAGT
TCATAGCCACCATGTCAGTTGTGTTGATGCTTAGCAATTCTAAATGCTTAATGAACTTTGGAGACGAACTATAGC-----
-------ATAGCAGTGTAGCATTCATGCTTCAGAATGAATTGGCACAAGTTCATTCACACAAGACTAAGATTTTGATAGT
TTGGGTGATGATTCAGCTGGTTAACGTGTGTAAATAAATGGATTCCTCTGTGTGTTGGTA-----TGTAGGTGGGTGGCG
GCGCAGAGCGTGTTCTACCACCTGTACAACCAGGTGTCGTACATGTCGCTGGACGAGATCTCGCCGCTGACATTCAGCGT
GGGCAACACCATGAAGCGCATCTCGGTCATCGTCGCGTCCATCATCATCTTCCGCACGCCGGTGCAGCCCGTCAACGCGC
TCGGGGCGGCCATCGCCATCCTCGGAACCTTCATCTACTCCCAGGTGATCCATCTCACACGTCTCACTTACCTCACCGCG
TACGT----AAGGAAGAAGGAAGCAAGCAATTCAGAATTT-GACACTAAAAC-TTTGTTGGCCTCGTGTTGCAGGCAAAG
CAGTAAGGGAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------AACCATCGAAACGATGTCTCTTCCGACGAGAGTCGGCCCGGCGGCGTTCGGACACTATATGTT
GTTGA---------------------------------------------------------------------------
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------
>chr2D_1_TraesCS2D01G226000
TTTCTAAGAAGGAGGGACTCTTTCGATTTTGAAAGCTTGGTATAACAATGGCATTTGCAGTGCCTTTTACTGTTGGTTCA
CTGCATTTTTCTAG-GCTCCAACATGCGGCTTACAATCGAAGGAAAGAGGCAGCTTAGTATATTTTTTATGTGATTTTAT
TTTCTATTGTTTGTTTTGTGTCATGTCTTTTTCAGTGTGCTGGC-TATTATTTCCCTTGATAATTATTAGATATAAAAAG
TCATTCCGTGTCTTTTTAAAAGAAATATAATCATCTCTCTTTATTTATATATATATAAATAATCCTATCTATTTTCAAGT
GATATATAAATTATACTGATGCATAAATGAACAAAACCACAAATTAACTTATCTAAAGGGCTATA---TTTTTCTTCTTT
GAGGCGGCGATTTGCTACGTAGATCACG-GTCGTCAGTATGTCCTGATTTAAATCAATGACTTTTCATCTGCTACGTCTA
TAAGCTCATAGGTTTTAACAAGGATGCTCCAGTAAACTGGATGCCCAGAGTT-GATAACAAGGTTTGCTTACAGTGTGCC
GCCTACCGACCCAGAATGAAAACCACACAAATTTCTTCAAATGACTTGTCTGTAATTTCATATTCTTGTAAGGAACTTCT
CGTAGGGACGTGCCTTTGGGCCTTCTTGTTGATAAATAAATAAATAAAAGAGGGTCAAAAACAAGAATATTCACAAGATA
TTCTAGTAGTACCATAGTGCAGGAAAATAGGGCATAAATTAAATTAACGAATAAACATTTTTTTGCATCGAAAAAAGATA
CTCCTAAAACCAGTGGCGAAAAGATC-----ATGAACTGGCCAAACCGCCTCCCTTCTCCTTCGCGCATCCCCCATAAAT
ACCTTCTTCCACC-CCATCTCCCCCTCCACCATCACAAACCGGCGGCACAGACCCGCACCAGGCGCATTCGCATACCACC
G-------CAACACACAGACAAACCCCAAGAAATCACCAGCCGCGCCTCCCGCCGCCAAAATGCTGGCCGCCGCCGCCTC
CGTGAAGTTCTCCCCGGCGTCCGCCGGTACCAGTAGCACCACCAAGTTGGCCTTCAAGCCTGTCCACCTCCCTTTCCTCC
CCAACGCCGTCCCGCGTCCCCTCTCCCTCTCGGCGCGTCCTCTGTACCGCCAGGAGCCGTTCCTGGCGGCGGCCCGCAAC
GACCGTGCCGCGTCAACGGCGCCCCCTGCAGCCACCGCGGATGGCGCGCGGCCGGTGGAGACGGCGGCCGCGCCGGAGGC
CGCGAAGAGCGCCAAGATCGGGGTCTACTTCGCCACGTGGTGGGCGCTGAACGTGATCTTCAACATATACAACAAGAAGG
TGCTGAATGCGTTCCCGTACCCGTGGCTCACGTCGACCCTGTCCCTGGCCGCCGGCTCCGCCATCATGCTCGTGTCCTGG
GCCACCAGGATCGCCGAGGCGCCCCAGACGGACCTCGATTTCTGGAAGGCTCTCTCTCCGGTGAGCGTCCTGCGCACGCG
TGGCTTCTTGGCGCGCTCTGTTCTTGCCAATCTCACCGGCACGTACGTCTTCTCGATGTGCTGATGCTTGTGTGTTG-GG
AATTTT-TTGATTTTTGCGTCCGAGCAGGTGGCGATTGCGCACACGATCGGGCACGTGGCGGCGACGGTGAGCATGGCGA
AGGTGGCCGTGTCCTTCACGCACATCATCAAGAGCGCGGAGCCGGCGTTCAGCGTGCTCGTCTCGAGATTCTTCCTCGGC
GAGCACTTCCCGTTGCCGGTCTACTTCTCCCTCCTCCCGATCATAGGTGGATGCGCTCTCGCGGCCGTCACCGAGCTCAA
TTTCAACATGATTGGTGAGG---------ACTCCCA-TTTTGTTGAACCTTGAAATTACCTCCAGCAGGTACCACC---A
CATAAGAAATATCGTCACTTTTGCTAGTAC--ACAACAGATATTTTTCAGTAGTA----CTCCATTTACGAAGAACCTTA
ACTGTCCACAAGTCCTGAGGTCTATAATTTAGCACGTATA--TTGTACCAAAAGCTTTGTCTTTGATGTCAAAATTGGAC
AACGTTGTACTTTTGGGTACGACTTTGGTATCGGTCCTTGAAAGTAGGCGGTTTAATTGAACATTATATAGATTTCGTTT
GACACTGTTGATTCTGATGATACCACGTGTGCTCAATTCACTGTAGGATTCCTGGGGGCGATGATCTCCAACCTGGCTTT
TGTGTTCCGGAACATATTCTCCAAGAAAGGGATGAAGGGCAAGTCGGTGAGCGGGATGAACTACTATGCCTGCCTCTCCA
TGCTGTCCCTGGTGATCCTCCTCCCTTTCGCCTTCGCCATGGAGGGCCCCAAGGTGTGGGCTGCAGGCTGGCAGAATGCA
GTCGCCGAGATCGGTCCCAACTTCGTCTGGTAAGCTCCA--TCACAGCACGTGACTGCTTGCCAGTTCGCTGTCATAAGT
TCATAGCCACCATGTCAGTTGTGTTGATGCTTAGCAATTCTAAATGCTTAATGAACTTTGGAGACGAACTATAGC-----
-------ATAGCAGTGTAGCATTCATGCTTCAGAATGAATTGGCACAAGTTCATTCACACAAGACTAAGATTTTGATAGT
TTGGGTGATGATTCAGCTGGTTAACGTGTGTAAATAAATGGATTCCTCTGTGTGTTGGTA-----TGTAGGTGGGTGGCG
GCGCAGAGCGTGTTCTACCACCTGTACAACCAGGTGTCGTACATGTCGCTGGACGAGATCTCGCCGCTGACATTCAGCGT
GGGCAACACCATGAAGCGCATCTCGGTCATCGTCGCGTCCATCATCATCTTCCGCACGCCGGTGCAGCCCGTCAACGCGC
TCGGGGCGGCCATCGCCATCCTCGGAACCTTCATCTACTCCCAGGTGATCCATCTCACACGTCTCACTTACCTCACCGCG
TACGT----AAGGAAGAAGGAAGCAAGCAATTCAGAATTT-GACACTAAAAC-TTTGTTGGCCTCGTGTTGCAGGCAAAG
CAGTAAGGGAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------AACCATCGAAACGATGTCTCTTCCGACGAGAGTCGGCCCGGCGGCGTTCGGACACTATATGTT
GTTGAGCATATCTAATTAAGGAC-CCCCCTTGTAATATTATATACTCGTATTAGGAACCTTCTTCTTCCTTTTTCCTTTT
TTTTCTAGGTTTAGCTGC--GGATGTCTCTGAATTCTTCGTTTGTTGTTCCGTGACCATGGTGCTGATGATGTAGAGAGG
TGAATGAATCCATCCAAATAAAGTTGCCAGGAATTTTTGCCCCCGATCTCCAGCCTACTTATAACGTGGTCCAAAACAAG
TCGCGTGGTTGAGAATGCATCGGCCCAGATTGTTTCCTTGCTGGCGATGGATACAGGGGCATGGCGGCGTCGTGCAATTT
GCGAAGCCGAGATCTCTGCGATGAGTGCGACGTTGGAGCGTAGCTCCT--TCCCCTTTGCTTGTTGCCTTGCCCTCCTC-
--------------------------------------------------------------------------------
----------------------------TCTTGTTTGGGAGCTTGTGCTGGGTCCCCGGCTCGTTTTGCCGAATACCCGG
CGTTTGGGCGCGGCATATGCCCCCCGTCGCATATATTCTTTGGTTCAACGTCACCTTTTCCGGTGCTCAAAGGGGCGATG
GGTTTGGTCTTCGATCCCGACGTTTCTTTCGGTGCTTTTTGGGAGCAGGAAACCTCCTCAGGCTGGTCATAGTGGGAGTA
ACTTAGACTAGTGTCATGCATATGACACTAGTCTAAGTTACTACCTTCATAATGCAAAGTAATATAATAGTAGTATTATA
GATGGCTTCATTTATTAGCCCGTAGACTCATCTTGTCTTGAAAAGCGCTATGTTACAGTAACATATTATGTTACCATCTC
TCATTAATTACTTGCACATAAGCAGAATTTTCTCGAAGTACGCTATGTTACTAGCTAAGTTCCACTATGACTAGCCTCTT
ATCGATGGAACACCTTTCTA-GGCGTAATCTACAATGCGAAGAGTAGGAAACCTCAT----ATCGATGAAATAGCTTTCT
AGGGGAGTCCATCACTACAAGAAATCAGTTGGATTCATCCCATGACAGCACGGTTGGCGATATTT--CGAAAGAGGAATA
GGGGTT
>chr2B_1
TTTCTAAGGAGGAGGGACTCTTTCGATTTTTAAAGCTTGGTATAACAAGGGCATTTGGAGTGCCTCATTCC-----TTTA
CTGTATTTTTTTAAAGCTCCAACAGGCGGCTTACAATCGAAGGGAAAGGGCGGCTAGTAT--TTTTTTATGTGATTTTAT
TTTCTATTGTTTGTTTTGTGTCATGTC-TTTTCAGTGTACTGGTGTATTATTTCCCTCGATAATTATTAGATATAAAAGC
-CATTCCGTGTCTTTCTAAAAGAAATATAATCATTTCTCTTTATTTATTTTTTTATAAATAATCCTACTTATTTTAAAGT
GATATATAAATTATACCGATGCATAAATGAACAAAACCACAAATTTACTTATCCAAAGGGCTATTTCCTTTTTCTTCTTT
GGGGCGGTGATTTGCTGCGTAGATCACGAGTCGTCAGTATGTCCTGATTTACATCAATGACTTTTTACCCGCTACTTCTA
TAAGCTCATAGGTTTTAACAAGGTTGCTCCAGTAAATTGGATGCCCAAAGTCAGATAACAAGCTTTGCTCACAGTGTGCC
GCCTACTGATCCAGAACGAAGACCACACAAATTTCTTCAAATGACTTGTCTATAATTTCATATTCTTGTAAGGAACTTCT
CGTAGGGACATGC-----------------------------AATAAAAGAGGGTCAAAAATAAGAATATTCACAAGATA
TTC---TAGTACCATAGTGCAGGAAAATAGGGAATAT-----ATTAACGAATAAACATTTTTT-GCATCGAAAAAAGATA
CTCCTAAAACCAGTGGCGAAAAGATC-----ATGAACTGGCCAAACCGCCTCCCTTCTCCTTCGCGCATTCCCCATAAAT
ACCTTCTTCCTCC-CCATCTCCCCCTCCACCATCACAAACCAGAGGCACAGACCCGCACCAGGCGCATTCGCATACCACC
G-------CA-------GACAAACCCCAAGAAATCACTAACCGCGCCTCCCGCCGCCAAAATGCTGGCCGCCGCCGCCTC
CGTGAAGTTCTCCCCGGCGTCCGCCGGTGCCAGTACCACCACCATGTTGGCCTTCAAGCCTGTCCACCTCCCTGCCCTCC
CCAACGCCGTCCCGCGTCCCCTCTCCCTCTCGGCGCGGCCTCTGTACCGCCAGGAGCCGTTCCTGGCGGCGGCCCGCAAC
GACCGTGCCGCGTCAACGGCGCCCCCTGCAGCCACCGCGGATGGCGCACGGCCGGTGGAGACGGCGGCCGCGCCGGAGGC
CATGAAGAGCGCCAAGATCGGGGTCTACTTCGCCACGTGGTGGGCGCTGAACGTGATCTTCAACATATACAATAAGAAGG
TGCTGAATGCGTTCCCGTACCCGTGGCTCACGTCGACCTTGTCCCTGGCAGCCGGCTCCGCCATCATGCTCGTGTCCTGG
GCCACCAGGATCGCCGAGGCGCCCCAGACGGACCTCGATTTCTGGAAGGCTCTCTCTCCGGTGAGCGTCCTGCGCACTCA
TGGCTTCTTGGCGCTCGCTGTTCTTGCCAATCTCACCGGCCCGTACGTGTTCTCGATGTGCTGATGCGTGTGTGTTG-GG
ATTTTTTTTTATTTTTGTGTCCGGGCAGGTGGCGATTGCGCACACGATCGGGCACGTGGCGGCGACGGTGAGCATGGCGA
AGGTGGCCGTGTCGTTCACGCACATCATCAAGAGCGCGGAGCCGGCGTTCAGCGTTTTCGTCTCAAGGTTCTTCCTCGGC
GAGCACTTCCCGTTGCCGGTCTACTTCTCCCTCCTCCCGATCATAGGTGGATGCGCTCTCGCGGCCGTCACCGAGCTCAA
TTTCAACATGATTGGTGAGCAATCTGCAGACTCCCATTTTTGTTGAATCTTGAAATTACCTCCAGCGGATACTCCTACAA
CATAAGAAATATCGTCACTTTTGCTAGTATATACAACAGATATTTTTCAGTAGTA----CTCCATTTCCGAAGAACCTGA
ACTGTCCACAAGTCCTGAGGTCTATAATTTAGCACGTATATATTGTACCAAAGGCTTTATCTTTGGCGTCAAAATTGGAC
AACGTTGTACTTTTGGGTGCGACTTTAGTATCGCTCGTTGAAAGTATGCGGTTTAATTAATTC-----------------
-----------------TGATAGCTCATATGCTCAATCAACTGTAGGATTCATGGGGGCGATGATCTCCAACCTGGCGTT
CGTGTTCCGGAACATATTCTCCAAGAAGGGGATGAAGGGCAAGTCGGTGAGCGGGATGAACTACTATGCCTGCCTCTCCA
TGCTGTCCCTGGTGATCCTCCTCCCTTTCGCCTTCGCCATGGAGGGCCCCAAGGTGTGGGCTGCAGGCTGGCAGAATGCA
GTCGCCGAGATCGGTCCCAACTTCGTCTGGTAAGCTCCAAAT-----CACGTGACTGCTTGCCAGTTCGCTGTCGTAAGT
TT-------------------TGTTGATGCTTAGCAATTCTAAATGCTTAATGAACTTTGGCGACGAACTATAGC-----
-------ATAGCAGTACAGCATTCATACTTCAGAATGAATTGGCACAAGTTCATTTACGAAAGACTGAGATTTTGACAGT
GTGTGTGATATTTCAGTTGGTTCATGTGTCTAAATAAATGGATTCCTGTGTGTGTTGGTATGTACTGTAGGTGGGTGGCG
GCGCAGAGCGTGTTCTACCACCTGTACAACCAGGTGTCGTACATGTCGCTGGACGAGATCTCGCCGCTGACATTCAGCGT
GGGCAACACCATGAAGCGCATCTCGGTCATCGTCGCGTCCATCATCATCTTCCGCACGCCGGTGCAGCCCGTCAACGCCC
TCGGGGCGGCTATCGCCATCCTCGGAACCTTCATCTACTCCCAGGTGACCCATCTCACACGCCTCACTTACCTCACCACG
TACGT----AAGG-------AAGCAAGCAAACCAGAATTT-AACACTGAAACTTTTGTTGACCTCGTGTTGCAGGCAAAG
CAGTAAGGCCCCGTTTGATAGCTCTGCATTTTCTAAGTATTTTGTGAATACTACAGTTTTTCTAAATACTATGGTTTTAA
TTACTTTAAGCTGTTTGGTCTCCACAAAAAACTGTAGTATTAATACTACAGTATTCCTCAAAATGCAGTATTTTCTCTGT
CTAATAAAAAGAACCCAGGACCTCTTTTTTTAAAACAGAGCAGGCGAAAAAACGAACACGTTTCTTCGTCCTCGTTCATT
CTCATGCCACCGCCGCTCGCTCGTTGCTGGAGATCGTCTCTCCCTCAGGTTGCCGTGGATAGATAAAGAGACGACCATGG
AAAAACGGCTAGTACGCTTAATCATCTGTTCCCTTCTCAAGGAGGCCCGTGGCATGAAGCTGGCAGGCCTTGCTTTCTGA
GGAAGAAACCTCCTGCTGCCTCATGAAGATTGCATCACCGCGCCTCCTACTTCTCTTCGTGTGTCTGCTACGGTGCCGGC
CAGCTGACGGCACTGCACGGTTTTTCTCATCTTTGTAAGCTGCAGGACGAGCTTTGGGCATGGTTGTTGACAGTTTGGCT
GTGGACTTTGTGCATATGGGTGGCCTTTTGCATGGCCGTTGGGTTTTGGGTAACAGGGTAAGCAAGTAGAAAACGGCTAG
CTAGTTATTAGGTGCGTCAATATATACAACACTACCAAACAGCTCCAAAGTATTCCCAATACTTCAAAATAATGTGGTAT
GTCAAAACTGTGGTATCTTACACCTACATGCTAAAATGTTGTAGTTTTCAATACTTTGGTTTTTTCAATACTTTACTATC
AAACACAGCCTAAGGGAAATCGACCAAACGATATCTCTTCCGACGAGAGCCGGCCCGGCG---TTCGGACGTTATATGTT
GTTGAGCATATCTGATTGAGGACACTCCCTTGTAATATATATACA--GTATTAGGAATCTCCTT----CTTTTTTCCTTT
TTTTCTAGGTTTAGCTGC--GGGTGTCTCTGAATTCTTCGTCTGTTGTTCCGTGACCATGGTGCTGATGATGTAGAGAGG
TGAATGAATCCGTCCAAATAAAGTTGCCAGGAATTTTCGCCCCCGATCTCCAGCCTAGTT---ACGTGGTCCAAAACAAG
TCGCGTGGTTGAGAATGCATCGGCCCAGATTGTTTGCTTGCTGGCGATGGATACAGGGGCATGGCGGCGTCGTGCAATTT
GCGAAGCCGAGATCTCTGCGATGGGTGCGACGTTGGAGCGTAGCTCCT--TTCCCTTTGCTTGTTGCCTTGGCCCCCTCT
CTCACTGCAGGTGCAGTTGGGTCACTAACATGTGGGCCCAACAAGCATCTGGCCCTTATGTCAGTGACCCAACTGCACCT
GCAAGTTATGTCACTGAAGCTGCGTCCTTCTCGTTTGGGAGCTTGTGCTCGGTCCCCGGC--------------------
-GTTTCGGCGCGGCACATGCCCCCCGTCGCATATATTCTTTGGTTCAACGTCACCTTTTAGAGTGCTCAAAGGGGCGATG
GGTTTGGTCTTCGATCCCGACGTTTCTTTCGGTGCTCTTTGGGAGTAGGAAACCTCCTTATATGGCGTAATCTACAATGC
GAAGAGTAGGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AACCTCAT
ATCGATGAAACCTCCTTATATGGCGTAATCTACAATGCGAAGAGTAGGAAACCTCAT----ATCGATGAAATAGCTTTCT
AGGGGAGTCCATCACTACAAGAAATCAGTTGGATTCATCCCATGACAGCACGGTTGGCGATATTTTTCAAAAGAGGGATG
GGGGT-
>chr2A_675
AAACTAAAAGAGCAT-----------------------------------------------------------------
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---------------------------------------------------------AAAACAAGAATATGCACAAGATA
TTC---CAAGACCATAGCCCAAG-AAAAAAGGAATAA-----ATTAGCGGAAAACATCTTTGCATGAACCAATGGTG---
------AAACCAGTGGTGAAAAGATCCCAGGATGAACTGCCCAAACCGCCTCGCTTCTCCTTCGCGCATTCCCCATAAAT
ACCTTCTTCCTCCCCCATCTCCCCCTTCACCATCACACACCAGAGGCACAGACCCGCACCAGGCGCATCCGCATACCACC
GCAGCACACA-------GACAAACCCCAAGAAATCACTAACCGCGCCTCCCTCCGCCAAAATGCTGGCCGCCGCCGCCTC
CGTCAAGTTCTCCCCGGCGTCCGCCGGTGGCAGTACCACCACCAAGTTGGCCTTCAAGCCTGTCCACCTCCCTCCCCTCC
CCAACGCCGTCCCGCGTCCCCTCTCCCTCTCCGCGCGGCCTCTGTACCGCCAGGAGCCGTTCCTGGCGGCGGCCCGCAAC
GGCCGTGCCGCGTCAACGGCGCCCCCTGCAGCCACCGCGGATGGCTCGCGGCCGGTGGAGACGGCGGCCGCGCCGGAGGC
CGCGAAGAGCGCCAAGATCGGGGTCTACTTCGCCACGTGGTGGGCGCTGAACGTGATCTTCAACATATACAACAAGAAGG
TGCTGAATGCGTTCCCGTACCCGTGGCTCACGTCGACCCTGTCCCTGGCCGCCGGCTCCGCCATCATGCTCGTGTCCTGG
GCCACCAGGATCGCCGAGGCGCCCCAGACGGACCTCGATTTCTGGAAGGCTCTCTCTCCGGTGAGCGTCCTGCGCACGCG
TGGCCTCTTGGGGAGCCCTGTTCTTGCCAATCTCGCCGGCGCGTACGTGTTCTCGATGTGCTGATGCGTGTGTGTGTTGG
GATTTC-TTTATTTTTGTGTCCGGGCAGGTGGCGATTGCGCACACGATCGGGCACGTGGCGGCGACGGTGAGCATGGCGA
AGGTGGCCGTGTCCTTCACGCACATCATCAAGAGCGCGGAGCCGGCGTTCAGCGTCCTCGTCTCGAGGTTCTTCCTCGGC
GAGCACTTCCCGTTGCCGGTCTACTTCTCCCTCCTCCCGATCATTGGTGGATGCGCTCTCGCGGCCGTCACCGAGCTCAA
TTTCAACATGATTGGTGAGCAATCTGCAAACTCCCA-TTTTGTTGAACCTTGAAATTACCTCCAGCAGACACCACTAG--
-ATAAGAAATATCGTCACTTTTGCCAGTAC--ACAACAGATATTTTTCAGTAGTATGTACTCCATTTACGAAGAACCTGA
ACTGTCCACAAGTCCTGAGGTCTATAATTTAGCACGTATA--CTGTACCAACAGCTTTGTCTTTGATGTCGAAATTGGAC
AACGTTGTACTTTTGGGTACGACTT----------CGTTGAATGTATGGGGTT----TAATTC-----------------
-----------------TGATTGCACATATGCTCAATCAACTGTAGGATTCCTGGGGGCGATGATCTCGAACCTGGCGTT
CGTGTTCCGGAACATATTCTCCAAGAAGGGGATGAAGGGCAAGTCGGTGAGCGGGATGAACTACTATGCCTGCCTCTCCA
TGCTGTCCCTGGTGATCCTCCTCCCTTTCGCCTTCGCCATGGAGGGCCCCAAGGTGTGGGCTGCAGGCTGGCAGAATGCA
GTCGCTGAGATCGGTCCCAACTTCGTCTGGTAAGCTCCA--T-----CACGTGACTGCTTGCCAGTTCGCTGTCATAAGT
TCATAGCCACCATTTCAGTTGTGTTGATGCTTAGCAATTCTAAATGCTTAATGAACTTTGGAGACGAACTATATAGCATA
CATGCATATAGCAGCATAGCATTCACACTTCA----GAATTGGCACAAGTTCATTCACAAAAGGCCAAGATTTCGACAGT
CTGTGTGATAATTCAGTTGGTTAATTTGTGTGAAT----GGATTCCTCTGTGTGTTGGTA-----TGTAGGTGGGTGGCG
GCGCAGAGCGTGTTCTACCACCTGTACAACCAGGTGTCGTACATGTCGCTGGACGAGATCTCGCCGCTGACATTCAGCGT
GGGCAACACCATGAAGCGCATCTCGGTCATCGTCGCGTCCATCATCATCTTCCGCACGCCGGTGCAGCCCGTCAACGCGC
TCGGGGCGGCCATCGCCATCCTCGGAACCTTCATCTACTCCCAGGTGATCCATCGCACACGTCTCGCTTACCTCACCACG
TACGTAATGAAGG-------AAGCAAGCAAACCAGAATTTTAACACTGAAACTTTTGTTGACCTCGTGTTGCAGGCAAAG
CAG-----------------------------------------------------------------------------
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----------TAATGGAAACCATCGAAACGATGTCTCTCCCGACGAGAGTCGGCCCGTCG---TTCGGACGTTATATGTT
GTTGAGCATATCTAATTAAGG--ACCCCCTTGTAATATATAT---------TAGGAACCTTC--------TTCTTCAGTT
TTTTCTAGGTTTAGTTGCTCGGATGTCTCTGAATTCTTCGTTTGTTGTTCCGTGACCATGGTGGTGATGATGTAGAGAGG
TGAAAGAATCCATCCAAATAAAGTTGCCAGGAATTTTTGCCCCCGATCTCCAGCATACGT---ACGTGGTCCAAAACAAG
TCGCGTGGTTGAGAATGCATCGGCCCAGATTGTTTGCTTGCTGGCGATGGATACATGGGCATGGCGGCGTCGCGCAATTT
GCGAAGCCGAGATCTCTGCGATGGGTGCCACGTTGGAGCGTAGCTCCTCCTTCCCCTTGCTTGTTGCCTTGCCCCCCTCT
CTCTTGT-------------------------------------------------------------------------
------------------------------TTGTTTGGGGGCTTGTGCTGGGTCCCCGGCTCGTTTTGCTGAATACCCGG
CGTTCGGGCGCGGCATATGCCCCCCGTCGCATATATTCTTTGGTTCAACGTCACCTTTTAGAGTGCTCAAAGGGGCGATG
GGTTTGGTCTTCGATCCTGACGTTTCTTTCGGTGCCTTTTGGGAGTAGGAAACCTCCT----------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------CAT
ATCGATGGAACACCTTTCTA-GGCGTAATCTACGATGCCAAGAGTTGGAAACCTCATATCGATCCATGAAATGGCTTTCT
AGGGGAGTCCA---CTACAAGCAATTAGCTGGATTCATCCCGTGACAGCACGGTTGGCGATATTT--CGAAAGAGGAATG
GGGGTT
>SNPs
------------------------------S-----------------S--------S-------SS-S-SSSSSS--S-
---S------S--S----------S------------------S--SS---S---SSSSSSS------------------
---------------------------S----------S----S-------------S--------------------SS
S--------------S------------------S-------------S-S-S--------------SS------S----
----------------S----------------------------S-------S----------S---------------
-S-----S--------S----------------------------------S-------------S-S-S-----S----
-----------------------S------------S----------S---S----------S------S----------
------S--S------S---S------------------------------S----------------------------
---------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
---SSS--------------------------S----SSSSS---------------------S----------------
---------------------------------------------------------------------S----------
----------S------------------------------S-S------------------------------------
----------SSSSSSS--------------------S-S----------------------------------------
----------------------------S------S-------------------------------------SS-----
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-----------------------S-------S------------------S------------
---------S-------S-----S--------------------------------------------------------
-------------------------------------------------------S-----------S------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------S------S----
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------S------S--S---------S-----------S-SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS-----S---S-S--------SS--------------------------------------S--
S--------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------SSSSS---------------------------------
-------------S------------------------------------------------------------------
---------------S----------S--------------------------------S----------------S---
S--S-----S------S-------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------SSSSSSS----------SS---------S-----S------------S-------------------
--------SSS---------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------SSS-------SS--------
--------------------------------------SSSSSSSSS-----------------SSSS------S-S---
--------------------------------------------------------------------------------
------------------------------------------------------------SSS-----------------
-----------------------------------S--------------------------------------------
-----------------------S---------------------------S----------------------S-----
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------------------------------------------SSS------------------
---------------------------------------------S------------S-SSSS-SSS-SSS-SSS-SSS
SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S----S-
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
------
>forward_124
--------------------------------------------------------------------------------
------------------------TGCGGCTTACAATCGAAGGA------------------------------------
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>reverse_1610
--------------------------------------------------------------------------------
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---------GATTTTTGCGTCCGAGCAGG---------------------------------------------------
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------
>forward_972
--------------------------------------------------------------------------------
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------------------------------------------------------------------------CATTCGCA
TACCACCGCAAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2199
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CACTGTAGGATTCCTGGGGG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_973
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATTCGCA
TACCACCGCAACA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2641
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TTGGGTGATGATTCAGCTGGT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_2238
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGATGATCTCCAACCTGGCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------
>reverse_4196
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CCTTGCTGGCGATGGATACA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
