>input_sequence_38706
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------------------------------------ATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACAC
CCTCGTCGCCCACTACAGCGGCGAGCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCGTCCAGTAAGCCTCCTCCTCATCCT
CCCGGGT------CGCGATCGGCCTCTCCCCTCCACGCCGTAAAGGATGGGCTATCACGGCGGTCTGGCGTGGTTTCCGG
TCAATTTCGCCGCGGATTTGGGGGAAGGGCGTGCCTTTTTACGGCGGCGAGAGTGGATTTGGGTGTTTATTGGCTTGGAT
TCGTCGAGTGTATTCGCTAATTTCAGATGCAGAGATTATCTTAAGTAGATAGGAGGAAATATTTTAAGAAACACTCCTTC
CCTTCACAAATGTAAAGATGTTGCAAC-TTTTTTTT--GAATCGGATG--TATATAGACACGTTTTTAGTGTGTTTGTTC
ACTCATTTCAGTCCACATGTAGTCCATATCGAAATATTCAAAACATCTTATATTTGTGAATGGAGGGAGTAATATTTTTT
---------------------------------------GGCCTTCCAGCTTTTGGTACTGGTTCATATCCTGCCATTCG
TAAAATGTCGTCAGAGTTCCATCACAGTATTGTAGGTTTATTAAGG-------CCGTTTAGCTAATACGGTAGTTTCTGA
AAAAACGTTTTAGTGTTATCTGGCAAAACATATATATACATACCATGCCTGAGCTCAGTGGGTTAAATCTTGTAACTTCA
GCCCACTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCCGAGCCACGCCTAAGGGGATGCATTGGAACTTTGGAGCCC
CGTCAGATTGTAAGTGGCTTCAAGGATTATGCGCTGACAAGGTAACTGTTCCAAGGACATAGGATTTCCATGTGCTTAGT
ATCAATATTTCCCAGAAGATTTTCTAGTGCACTACCAGGAAGTGTCACACACTATCTATTGATTGGATTATATTAACTAC
ACAAGATCTCACTTGTAGTGCCCTGAGGGATCGGCGCTTTTCTCCGATACAGTCCAAAGAGCTGCCATATTTGGAATGCA
CAGTTTCTATATTGACTGAATACGAAACTGCACTCAACCACCTTGATTGGGAGGTTTGCTCCTACATGCTATTAACTCTA
ATTCCATTGGTGTCTATGGTCTTACAGCCAAAAATTCGCATCAACGCTATTTTCTTATGAGACTGCAGGTTGGAAAGCAT
GGTTTAATTATTGAGTTCACCGATCCTGACTATAATGTAAGACGGAGTGGAACTTATTTACCTGAGGTTGCTGCCCATGA
AGGTGAGCACTTATCAGCTACATATCCCTCCATTAATATCCCTCAGTTCTTAAAACTGCTATACACAGTTACATAATCAG
CCCAAAACCTGTTGAAAATTTCTATTGAGTTACAATGCCATTGTGTTGTTGAGAAATTTGTCTCCAC----------ATT
TTGGCTTTGTGTATCTCTATTTAGAGTCTGCCATTTATCTAGCAAAATCAACCCTCCAGTCTGTACCCTGTTTAGATATC
AAGTACTACCTCCGTCCGAAAAAGCTTGTCCCTCAAATGGATGTATCTAGCACTAACTTGGTGCTAAATACATTCATTTG
AGGGACAAGCTTTTTCGGACGGAGGGAGTACTCATCACAGTTTACTCACTTGCTTGAATGTATAAAGAACCTCGATGCAA
GAGAGCCTCCAAGTGCCGGATATGTTAACTTCATGGGATTTCACAATATCACATGTCCATAT--GGATGAAATAAATAAA
ATTGAAGAGCACGGGAGAACAAATAAAAAGCTTTTAATCAATACATTCCCATTTTAGTTGCCTCTCTCTCGATATATATA
ACATAGTCCTGAGATACCTGGCAGGATGGACACAACTAGAGACCATTGACTCGCTCATGAGGAAGGCTGGCTACAATGGC
ACCATCACTGAGTCTTTGAGGAAGAAAATCCGCGTCACCCGCTACCAGAGTACCCTGTACACCATGCACTATGGTGAATA
TACTGCATATGTCAAGAAGAACAGAGGTGAAATTAACGGGGAACCCATAGTTAATGGATTCAAACCAGGCCAGTGA----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1D_1_TraesCS1D01G195100
ATGCTTATCATCAAAACTGTAATGCGATCG----TCCGACTTTGTTGGATGGGATTGGGATTCGATTGTGGTTGGGTGGG
ACGTCGCCTTCAGCAGCGAAAGGTATAATATCTTGAGCTA--CTAGTCAGAGCTGCACTGCAACCAAGTGCAGTTCAGTG
ACCCAGATTCTCTTCTTTCTGCTAGCC---TATATATATGG--TACTTGTTCTGCTAGCTTTGTTTCTA---GCTTGTTA
ATTTTT-TGGATGCTGCGTGGCGTGGAGCACACGTATGCTTGCTTGTTTGCAAACTTTTTTTGTTTGATTTAGGAACGCC
ACCTGACTGTAACATGTTTTCCTAGAAATACGTGTCGACCTGCTGAGCCATTGGCTC-AACAGTTGGCGAGAGCTGTAGA
CTGTAGAGAGTAGAGTAGATAGCACCATTTGAGCAGCTCCACCCCATGATAAAGAAAAAGTTTTACATATATACTCCCTT
TGAAAACTAATATAAGATCCAGTGATCTATAT--------------------CCATTTTCCCGACAAGTATTTTCGGACA
GAGGGAGTA------------------------CCAGCTAGAATTTGTAACAAAATCAGCAACATTGAAGGCTAAAGTGG
CGAGTTAGTGTGCGCCAAAATTCAAAGTCTGAAGTAGTGTGATCCATCGTCTTAATGTGGCGAGTTAGTGCGGATCCGGA
GTAACGTGGCAGAAATTTGATGGGCAGCAGTTTTAATTCTCCTGGGATTCATGATGCGCAAGCAAATACCCGTTACGCCC
CTGCCTACCCCCCACTGCCTGCTAGCATAGGCCGTAAATACCAGCGGAAGCCAGGGGCAGGCGTGACAATTCCGGAAAGG
AAAGGAAAACC-CCCACGGAGACGCACGCAGCCCTCCC--CTACTTGACTCGGAATCCAACAGCACGAAACGAACGCACC
GCTCGCTTCCGCCCCTCCCCAACCTGCGTACCCTCCC----CCCCACCGCCGCGCCGC---------CCGCCTCGGCTGA
ACGACGGCCGGGCCCTCTCGGCGGCGGCGATCGACGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACAC
CCTCGTCGCCCACTACAGCGGCGAGCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCGTCCAGTAAGCCTCCTCCTCATCCT
CCCGGGT------CGCGATCGGCCTCTCCCCTCCACGCCGTAAAGGATGGGCTATCACGGCGGTCTGGCGTGGTTTCCGG
TCAATTTCGCCGCGGATTTGGGGGAAGGGCGTGCCTTTTTACGGCGGCGAGAGTGGATTTGGGTGTTTATTGGCTTGGAT
TCGTCGAGTGTATTCGCTAATTTCAGATGCAGAGATTATCTTAAGTAGATAGGAGGAAATATTTTAAGAAACACTCCTTC
CCTTCACAAATGTAAAGATGTTGCAAC-TTTTTTTT--GAATCGGATG--TATATAGACACGTTTTTAGTGTGTTTGTTC
ACTCATTTCAGTCCACATGTAGTCCATATCGAAATATTCAAAACATCTTATATTTGTGAATGGAGGGAGTAATATTTTTT
---------------------------------------GGCCTTCCAGCTTTTGGTACTGGTTCATATCCTGCCATTCG
TAAAATGTCGTCAGAGTTCCATCACAGTATTGTAGGTTTATTAAGG-------CCGTTTAGCTAATACGGTAGTTTCTGA
AAAAACGTTTTAGTGTTATCTGGCAAAACATATATATACATACCATGCCTGAGCTCAGTGGGTTAAATCTTGTAACTTCA
GCCCACTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCCGAGCCACGCCTAAGGGGATGCATTGGAACTTTGGAGCCC
CGTCAGATTGTAAGTGGCTTCAAGGATTATGCGCTGACAAGGTAACTGTTCCAAGGACATAGGATTTCCATGTGCTTAGT
ATCAATATTTCCCAGAAGATTTTCTAGTGCACTACCAGGAAGTGTCACACACTATCTATTGATTGGATTATATTAACTAC
ACAAGATCTCACTTGTAGTGCCCTGAGGGATCGGCGCTTTTCTCCGATACAGTCCAAAGAGCTGCCATATTTGGAATGCA
CAGTTTCTATATTGACTGAATACGAAACTGCACTCAACCACCTTGATTGGGAGGTTTGCTCCTACATGCTATTAACTCTA
ATTCCATTGGTGTCTATGGTCTTACAGCCAAAAATTCGCATCAACGCTATTTTCTTATGAGACTGCAGGTTGGAAAGCAT
GGTTTAATTATTGAGTTCACCGATCCTGACTATAATGTAAGACGGAGTGGAACTTATTTACCTGAGGTTGCTGCCCATGA
AGGTGAGCACTTATCAGCTACATATCCCTCCATTAATATCCCTCAGTTCTTAAAACTGCTATACACAGTTACATAATCAG
CCCAAAACCTGTTGAAAATTTCTATTGAGTTACAATGCCATTGTGTTGTTGAGAAATTTGTCTCCAC----------ATT
TTGGCTTTGTGTATCTCTATTTAGAGTCTGCCATTTATCTAGCAAAATCAACCCTCCAGTCTGTACCCTGTTTAGATATC
AAGTACTACCTCCGTCCGAAAAAGCTTGTCCCTCAAATGGATGTATCTAGCACTAACTTGGTGCTAAATACATTCATTTG
AGGGACAAGCTTTTTCGGACGGAGGGAGTACTCATCACAGTTTACTCACTTGCTTGAATGTATAAAGAACCTCGATGCAA
GAGAGCCTCCAAGTGCCGGATATGTTAACTTCATGGGATTTCACAATATCACATGTCCATAT--GGATGAAATAAATAAA
ATTGAAGAGCACGGGAGAACAAATAAAAAGCTTTTAATCAATACATTCCCATTTTAGTTGCCTCTCTCTCGATATATATA
ACATAGTCCTGAGATACCTGGCAGGATGGACACAACTAGAGACCATTGACTCGCTCATGAGGAAGGCTGGCTACAATGGC
ACCATCACTGAGTCTTTGAGGAAGAAAATCCGCGTCACCCGCTACCAGAGTACCCTGTACACCATGCACTATGGTGAATA
TACTGCATATGTCAAGAAGAACAGAGGTGAAATTAACGGGGAACCCATAGTTAATGGATTCAAACCAGGCCAGTGATTTA
TCTGTACTGTAGCAGGTACTA-CAACTATTTATAATTTGGCTTGGAAGGAATTGGCGTGAGAATTAGTTTAAAACAAATC
AATTCTAGTCATTGATCTGCCATCATGCCATTTCATTCCAAAGAATGTGGGGTGCCATGTCAACAGCCCTCGTGTCATTC
TGGGACACAAATTAAATGGTGATGGTTATGTATCTGTAAGCATATGCACTTTGATTACAAATAATTGTGTGAAATTAATT
GATTTAAATTGTTCATTCACTGGTTATGATACCAGTAATCTTGTCTTGTTG---CTTGAGATTTGATCTGGAATCTTAGT
CAAAAGCTCAAACATAAC-ATTATTGACAAGAAAAATACAGGATGAACTCACAATCTGATGTTTGTTGTGACCAACTGAA
GCATGTAGAACAATTCTGAAATTACTTGGTACTATGGCAGTGCCCTTCTGTTCCTTTCCACTCTAGACAACTGGAGGCAG
GCACCTCACACAAAGAGCAATAACACTGCATTGTGTAGAACAGCAAATTATTTGTACTGGAAAGGAATTTGTTATA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CTTGCAAGCAACCTTGGATGGGTAGTCAGTCAGGTTACCTTGCAGCAACGGCTCTCATTCGGAGTTGTATC
AAACGGGTAATTTCCACACAAGTTCCTTGGATGCGGATAATCCCTAAGGGCCACCTAGATATTTATCATCATGGAGCATA
TCAGAGATTTTGCCACATTTATATGGATTCAACATCATAAAAGATTTAACAGTTCTTGAAACACAAAATCTGAACCATTT
GTACTTGGCAG---TACTGTTATTTGTGGAGCTTAATACATCATTTCTCAGTGCAAGCATGCTCAGATTACTAATACATA
GATGTAATATAGCAAGAAGTTGGAAAGCCAGTTCAGAGAGCCTCTTTCGCTACTACGACAACGTAGTCACCGTCTTCATC
AAAATCACTTCCTTCAGGGCTGAGTCTATCCATCTCTGGGAGATGGTCATACCCATC
>chr1A_1
ATGCTTATCACCAAAACTGTAATGCGATCGATCGTCCGACTTTGTTGGATGGGGATTCGA------TGTGGTTGGGTGGA
ACGTCGCCTTCAGCGGCGAAAGGTATAATATCTTGAGCTATACTAGTCAGAGCTGTACTGCAACCAAGTGCAGTTCAGTG
CCCCAGATTCTCTTCTTTCTGGTAGCC---TATATATATATGCTACTTGTTCTGCTAGCTTTGTTTCTACTAGCTTGTTA
AATTTT-TGGATGCTGCGTGGCGTGGAGCACACGTATGCTTGCTTGTTTGCAAACTTTTCTTGTTTGATCTGGGAACGCC
ACCCGACTGTAAAATGTTTCCTTATAGATACGTGTCGACCTGCTGAGCCATTGCCTCGAACAGTTGGCGAGAGCTGTAGA
CTGTAGAGTTG-------TTAGCACCATTTGAGGAGCTCCACCCCATGATAAAGAAAA-GTTTTACATATATACCCCCTC
TGTAAATTAATATAAGATCCAGTGATCTATATTCATTTCTCCGACAATATATCCATTTTCTCGACAAGTATTTTTGGAGG
AAGGGAGTATCAGTTTAGTTTACAGAGGGAGTACCAGCTAGAATTTGTAGCAAAATCAGCAACATTGAAGGCTGACTATC
TC--------TGCGCAAAAATTCAAAGCCTGAAGTAGTGTGATGCATCGTATTAATGTGGCGAGTTAGTGCGGATCCGGA
ATAACGTGGCAGAAATTTCATGGGCAGCAGTTTTAATTCTCCCGGGATTCATGACGCGCAAGCAAATACCCGTTACGCCC
CTGGCTACCCCCCACCGCTTGCTTGCATAGGCCGTAAATACCAGCGGCAGCCAGGGGCAATCGTGACAATTCCGAAAAGG
AAAGGAAAACT-CCCACGGAGACGCACGCATCCCCCTTCTCTACTTGACTCGGAATCCAACAGCACGAAACGAACGCACC
GCTCGCTTCCGCCCCTCCCCAACCTCCGTACCCTCCCTCCCCCC-ACCGCCGCGCCGTCCGCGCCCGCCGCCTCAGCTGA
GCGACGGCCGGGCCCTCTCGGCGGCGGCCATCGACGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACAC
CCTCGTCGCCCACTACAGCGGCGAGCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCGTCCAGTAAGCCTCCTCC---TCCT
CCTCCTCCCAGGCCGCGATCGGCCTCTCCCCTCCACGCCGTAAAGGACGGGCTTTCACGGCGGTCTGGCGTGGTTTCTGG
TCAATTTCGCCGCGGATTTGGGGGAAGGGCTCGCCTTTT-ACGGCGGCGAGAGTGGATTTGGGCGTTTGCTGGCTTGGAT
TCATCGAGTGTATTCGCTAATATCAGATGCAGAGATTATCTTAAGTAGAGAAGAGGAAATA-----AGAAACACTCCCTC
CTTTCACAGATATAAAGATGCTGCAACTTTCTTTTTCTGAATCAGATGTATATATAGACACGTTTTTAGTGTGTGTTTTC
ACTCATTTCAGTCCACATCTAGTCCATATTGAAATATTCAAAACGTTTTATACTTGTGAATGGTGGGAGTCCAC------
-----------------------ATGTTTTTGCATGTTTGGCCTTCCAGCTTTTGGTACCGGTTCCTATCCTGCCATTCG
TAAAATGTTGTCAGAGTTCCATCACAATATTGTAGGTTTATTAAGA-------CTGTTTAGCTAATAAGGTAGTTTCTGA
AAAAACGTGTTAGTGTTATCTGGAAAAACATATATGTACCATGT----CTGAGCTCAGTGGGTTAAATCTTGTAACTTCA
GCCCACTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCCGAGCCACGCCTAAGGGGATGCATCGGAACTTTGGAGCCC
CGTCAGATTGTAAGCGGCTTCAAGGATTATGCGCTGACCAGGTAACTGTTGTAAGGACATAAGATTTCCATGTGCTTGGT
ATCAATATTTTCAT------------GTGCGCTACCAGTCAGTGTTGCACACTATCTATTAGTTGGATCATATGAACCAA
CTAAGATCTCACTTGTAGTGCCCTGAGGGATCGGCGCTTTTCTCCGATACAGTCCAAAGAGCTGCCATATTTGGAATGCA
CAGTTTCTATATTGACTGAATACGAAACTGCACTCAACCACCTTGATTGGGAGGTTTGCTCCTACATGCTATTAACTCTA
ATTCCATTGGTGTCTATGGTCTTACAGCCAAAAAATTGCATCAACGCCATTTTCTTATGAGACTGCAGGTTGGAAAGCAT
GGTTTAATTATTGAGTTCACCGATCCTGACTATAATGTAAGACGGAGTGGAACTTATTTACCTGAGGTTGCTGCCCATGA
AGGTGAGCACTTATCAGCTACATATCCCTCCACTAATATCCCTCAGTTCTTAAAACTGCTACACACAGTTACATAATCAG
CCCAAAACCCGTTGAAAATTTCTACTGAGTTACAATGCCATTGTGTTGTTGAGAAATTTGTCCCCACATGCCAATGTATT
TTGGCTTTGTGTATCTCTATATAGAGTCTGCCATTTAGCTAGCAAAATCAACCCTCCAGTCTGTACCCTGTTTAGATATC
A-------------------------------------------------------------------------------
--------------------------AGTACTCATCGCAGTTTACTCACTTGCTTGAATGTATAAAGAACCTCAATGCAA
GAGAGCCTCAAAGTGCTGGATATGTTAACTTCATGGGATTTCGCAATATCACATGTCCATATATGGATGAAATAAATAAA
ATTGAAGAGCGCGGGAGAACAAATAAAAATCTTTTAATCAGTACATTCCCATTTTAGTTGCCTCTCTCTCGATATATATA
ACATAGTCCTGAGATACCTGGCAGGATGGACACAACTAGAGACCATTGACTCGCTCATGAGGAAGGCTGGCTATAATGGC
ACCATCACCGAGTCTTTGAGGAAGAAAATCCGCGTCACCCGCTACCAGAGTACCCTGTACACCATGCACTATGGTGAATA
TACTGCATATGTCAAGAAGAACAGAGGTGAAATTAACGGGGCACCCATAGTTAATGGATTCAAACCAGGCCAGTGATTTA
TCTGTACTGTAGCAGGTAATA-CAACTATTTTTAATTTGGCTTGGAAGGAATTGGTGTGAGAATTTGTTCG-AAAAAATC
AACTCTAGTCATTGATCTGCCATCATGCCATTTCATTCCAAAGAATGTGGGGTGCCATGTCAACGGCCCTCATGTCGTTC
TGGG--ACAAATTAAATGGTGATGGTTATGTATCTGTAAGCCTATGCACTTTGATTACAAATAATTGTGTGAAATTAATT
GATTTAAGTTGTTCATTCACTGGTTATGATACCAGTAATCTTGTCTTGTTACTACTTGAGATTTGATCTGGAATGTTAGT
CAAAAGCTCAAACATAACAATTATTGCCAAGAAAAATACAGGATGAACTCACAATCTGATGTTTGTTGTGACCAACTGAA
GCATGAAGAACAATTCTGAAATTACTTGGTACTATGGCAGTGCCCTTCTGTTCCTTTCCACTCTAGACAACTGGAGGCAG
GCACCTCACACAAAGAGCAATAACACTGCATTGTGTAGAACAGCAAATTATTTATGCTGGAAAGGAATTTATCATAGTAT
AGTGGAATCTCTAAAAAGACATATACTCCCTCCGTCCCAAAATAAGTGTCTTAAGCTTAGTACTCCCTCCGTCCGGAAAT
ACTTGTCCTAGAAATGATTGAAAATGAATGTATCTATAACTAAAATAAGTCTAGATACAACCATTTGTAGGACAAGTATT
TTCAGGCGGAGGGAACTTTATACTAGAGTTAATACAAAGTTGAGACACTTATGTAGAGACGGAGGGAGTATTTAGGAAGG
GAGGGAGTGCTTGCAAGCAATCATGGATGGGCAGTCAGTCAGGTTACCTTGCGACAACGGCTCTCGTGCGGAGTTGTATC
AAATGGGTAATTCCCACACAGGTGCCTTGGATGCGGAAAGTCTTTCAGTGCCACCTAGTTATTCATCATCATGGAGTATA
TCAGAGATATTGTCACATTTATATGGATTCAACATCATAAAACATTGAACAGTTCTTGTCACACAAAATCTGAATCATTT
GCACTTAGTAGTACTACTGTTATTTGTGGAGCATAAAACATCATTTCTCATTGCAAGCAT--------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1B_1
ATGCTTATCACCAAAACTGTAATGCGGTCG----TCCGACTTTGTTGGATGGGGATTCGA------TGTGGTTGGGTGGA
ACGTCGCCTTCAGGAGCGAAAGGTATAATATCTCGAGCTA--TTAGTCAGAGCTGCACTGCAACCAAGTGCAGTTCAGTG
ACCCAGATTCTCCTCTTTCTTGGTAGCCTATATATATATATGCTACTTGTTCTGCTAGCTTTGTTTCTA---GCTTGTTA
ATTTTTTTGGATGCTGCGTGGCGTGGAGCACACGTATGCTTGCTTGTTTGCAGTGCCATTGCTTGTTT---------GCC
ACCTGACTGTAAAATGTTTCCCTATAGATACGTGTCGACCTGCTGAGCCATTGCCTCGAACAGTTGGCGAGAGCTGTAGA
CTGTAGAGTAT-------ATAGCACCATTTGAGGAGCTCCACCCCATGATAAAGAAAA-GTTTTACATAT------CCTT
TGTAAAATAATATAAGATCCAGTGATCTATATCCATTT-----------TATCCATTTTCCCGACAAGTATTTTCGGACG
GAGGGAGT------------------------ACCAGCTAGAATTTGTAGCAGAATCAGCAACATTGAAGGCTGACTATC
TC--------TGCGCAAAAATTCAAAGTCTGAAGTAGTGTGATGCATCGTCTTAATGTGGCGAGTTAGTGCGGATCCGGA
TTAACGTGGCAGAAATTTCATGGGCAGCAGTTTTAATTCTCCTGGGATTCATGATGCGCAAGCAAATACCCGTTACGCTC
ATGGCCACCCCCAGCGCTTTGCTTGCATAGGCCGTAAATAGCAGCAGCAGCCAGGGGCAGGAGTGACAATTCCTGAAAGG
AAAGGAAAACTCCCCACGGAGACGCACGCAGCCCCCTG-TCTACTTGACTCGGAATCCAACAGCACGAAACGAACGCACC
GCTCGCTTCCGCCTCTCCCCAACCTCCGTACCTTCCC----CCC-ACCACCGCGCCGTCCGGACCCGCCGCCTCGGCTGA
AAGACGGCCGGGCCCTCTCGGCGGCGGCGATCGACGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACAC
CCTCGTCGCCCACTACAGCGGCGAGCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCGTCCAGTAAGCCTCCTCC---TCCT
CCCGGGT------CGCGATCGGCCTCTCCCCTCCACGCCGGAAAGGATGGCCTTTTACGGCGGTCGGGCGTGGTTTCCGG
TCAATTTCGCCGCGGATTTGGGGGAAGGGCGTGCCTTTT-ACGGCGGCGAGAGTGGATTTAGGCGTTTATTGGCTTGGAT
TAATCGAGTGTATCGGCTAATTTCAGATGCAGAGATTATCTTACGTAGAGAAGAGGAAATATTTTAAGAAACACTCCCTC
CCTTCACAAATATAAAGATGCTGCAAC-TTTTTTTTTTGAATCGGATG--TATATAGACACGTTTTTAGTGTGTTTGTTC
ACTCATTTCAGTCCACATGTAGTCCATATTGAAATATTCAAAACATCTTACATTTGTGAATGGAGGGAGTAATATTTTTT
GGCCTTAGCTCAAGGGACATAGGATGTTTTTGCATGTTTGGCCTTCCAGCTTTTGGTACTGGTTCCTATCCTGCCATTCG
TAAAATGTTGTCAGAGTTCCATCACAATATTGTAGGTTTATTAAGAGTTAATACTGTTTAGCTAATACGGTAGTTTCTGG
AAAAACGTGTTAGTGTTATCTGGAAAA-CATATATGTGCCATGT----CTGAGCTCAGTGGGTTAAATCTTGTAACTTCA
GCCCACTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCCGAGCCACGCCTAAGGGGATGCATCGGAACTTTGGAGCCC
CGTCAGATTGTAAGCGGCTTCAAGGATTACGCGCTGACCAGGTAACTGTTGTAAGGACATAAGATTTCCATGTGCTTGGT
ATCAATATTTCCAT------------ATGCACTACCAGGCAGTGTTGCACACTATCTATTAGTTGTATCATATGAACTAA
-TAAGATCTCACTTGTAGTGCCCTGAGGGATCGGCGCTTTTCTCCGATACAGTCCAAAGAGCTGCCATATTTGGAATGCA
CAGTTTCTATATTGACCGAATACGAAACTGCACTCAACCACCTTGATTGGGAGGTTTGCTCCTACATGCTATTAATTGTA
ATTCCATTGGTGTCTATGGTCTTACAGCCAAC-ATTTGCATCAACGCTATTTTCTTATGAGACTGCAGGTTGGAAAGCAT
GGTTTAATTATTGAGTTCACCGATCCTGACTATAATGTAAGACGGAGTGGAACTTATTTACCTGAGGTTGCTGCCCATGA
AGGTGAGTACTTATCAGCTACATATCCCTC---TAAGATCCCTCAGTTCTTAAAACTGCTACACACAGTTACATAATCAG
CCCAAAACCCGTTGAAAATTTCTATTGAGTTACAATGCCATTGTGTTGTTGAGAAATTTGGCTCCACATGCCAATGTATT
TTGGCTTTGTGTATCTCTATATAGAGTCTGCCATTTATCTAGCAAAATCAACCCTCCAGTCTGTACCCTGTTTAGATATC
A-------------------------------------------------------------------------------
--------------------------AGTACTCATCACAGTTTACTCACTTGCTTGAATGTATAAAGAACCTCAATGCAA
GAGAGCCTCAAAGTGCTGGATATGTTAACTAAATGGGATTTCACAATATCACATGTCCATAT--GGATGAAATAAATAAA
ATTGAAGAGCACAGGAGAACAAAT-AAAAGCTTTTAATCAGTACATTCCCATTTTAGTTGCCTCTCTCTCGATATATATA
ACATAGTCCTGAGATACCTGGCAGGATGGACACAACTAGAGACCATTGACTCGCTCATGAGGAAGGCTGGCTACAATGGC
ACCATCACTGAGTCTTTGAGGAAGAAAATCCGCGTCACCCGCTACCAGAGTACCCTGTACACAATGCACTATGGTGAATA
TACTGCATATGTCAAGAAGAACAGAGGTGAAATTAACGGGGCACCCATAGTTAACGGATTCAAACCAGGCCAGTGATTTA
TCTGTACTGTAGCAGGTAATAACAACTATTTATAATTTGGCTTGGAAGGAATTGGTGTGAGAATTTGTTCAAAAAAAATC
AATTCTAGTCATTGATCTGCCATCATGCCATTTCATTCCAAAGAATGTAGAGTGCCATGTCAACGGCCCTCATGTCGTTC
TGGG--ACAAATTAAATGGTGATGGTTATGTATCTGTAAGCCTATGCACTTTGATTACAAATAATTGCATGAAATTAATT
GATTTAAGTTGTTCATTCACTGGTTATGATACTGGTAATCTTGTCTTGTTA---CTTGAGATTTGATCTGGAATGTTAGT
CAAAAGCTCAAACATAAC-AATATTGACAAGAAAAATACAGGATGAACTCACAATCTGATGTTTGTTGTGACCAACTGAA
G-------------------------TGGTACTATGGCAGTGCCCTTCTGTTCCTTTCCACTCTAGACAACTGGAGGCAG
GCACCTCACACAAAGAGCAATAACACTGCATGGTGTAGAACAGCAAATTATTTGTACCGGAAAGGAATTTGTTATA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CTTGGAAGCAACTTTGGATGGGTTGTCAGTGAGGTTACCTTGTGGCAACAGCTCTCGTGTGGAGTCGTATC
AAACAGGTAATTCCCACACAAGTGCCTTGGATGCGGGTAATCCCTAAGGGCCACCTAGTTATTTATCATCATGGAGCATA
TCAGAGATTTTGCCACATTTATATGGATTCAACATCATAGAAGATTTTACAGTTCTTGTCACATAAAATCTGAACCATTT
GTACTTAGCAG---TACTGTTATTTGTGGAGCTTAATACATCGTTTCTCAGTGCAAGCATGCTCAGATTACTAATACATA
GATGTAATATAGCAAGAAGTTTGAAAGCCAGTTCAGAGAGCCTCTTTCGCTACTACGACAACGTAGTCACCGTCTTCATC
AAAATCTCTTCCCTCAGGGTTGAGTCTATCCATCTCTGGGAGATGGTCATACCCATC
>SNPs
----------S------------------------------------------SS-SS--SSSSSS-------------S
--------------------------------------------------------------------------------
---------------------S-----------------SS---------------------------------------
---------------------------------------------------------------------S-S--------
------------S------S----S-S--------------------------S--------------------------
--------SS-SSSSSSS---------------S------------------------S---------------S-----
--S---S------------------------------------------------------------------------S
-------------------------------------------------S-----------------------S-SSSSS
SSSSSSSSSS-----S---------------------------S------------------------------------
S-----------------S-------------------------------------------------------------
---S-----------S--S----S-----------------------S--------------------------------
----------S-----------------------S-SS------------------------------------------
-------------------------S------------------S------------S----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------SSS----
-----------------------------------------------------S--------------------------
---------------------------------------S-----------------------S----------------
--S----------------------------------------------S-S-------------------------S--
-----------S--------S-----------------------------------------------------------
-----------------------------S--------------------------------------------------
-----------------------------------------------------------------S--------------
--------S-----------------S------------------S--------S-------------------------
--------S--------------S-----------S---SSSSSSSSS--------------------------------
----------------------------------------------------------------S---------------
--------------S-----------------------S-----------SS---------S---------------S--
------------SSSSSSSSSSSSSS-------------S-----SS-------------SS------S----S-----S
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S----------------------------S------------------
---------S----------------------------------------------------------------------
--------------------S-----------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------S------
---------S------S---------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
------------------S------------------------------------S---------S---S----S-----
----------------------------------------------------------------S------S----S---
----SS-----------------------------------S--------------------------------------
-------S------------------------------------------S-----------------------S-----
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S------------S-S------------
------------S----------S----------------------------------S---------------------
----------------------------------------------------------SS--------------------
------S-------------------------------------------------------------------------
---------------------S----------------------------------------------------------
------S-----S------S-------------------------------------
>forward_721
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GAGTTAGTGCGGATCCGGA
G-------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2733
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TTTCGGACGGAGGGAGTACT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_2667
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACCTCCGTCCGAAAAAGCTT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_4407
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------ACTTCCTTCAGGGCTGAGTC-------------------------------
