>input_sequence_38704
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------------------------------------------ATGGTACGCTCTCCCCTCACTGTTACCTATGGCGGCTC
TGATCCGTGCTCCTCCGTATGCCGTGTTTCAGCCTTCGTGCCTGCCTGTG--GGGTGTAGGAAGCATCTAGGTTTGCGAT
TGTCTGAGTGGCTTGCACACGGGGATCTATGAATAAGGATTCGAAATTACTAGTCTTTCTCGTGGTTTTGGTCTGCTTCG
CTGAGAAATCATCCTTGAAGCCGTAGCATCTGTCAGATCTAGAGTAAACTTGCCGGCGGCTTTATTTTTCATCTGGTGTT
GCTTGGTAAGATTTGCGGCTTGCCCAATTATACTG----TATTATGAAGTGGTCAAAGAGGATGTTAAGGTGTTCCTATA
GTTAGATTTTCCACTTCTGGGACCGGTTTTACTAATATGATATGCTCAGTGGTGGAC---TAATTGCCATAAAATGGAAG
TATGAAACTTTGATGCTATCCTTGGTTTGTTATAGTTATCTATTAGCATGGATGCAACTCTTACCGTTTGCTCCAAGATT
TACCACTAGAAATCTGAGCTTCAGCCTTCATTTTTCCAAAGCTCGATTGGTTAGCATGAGGCCTTGGGCAGCACTAGTTA
TTTCCTCACTGTTGTGTTCATTCT-----ATACATTGCTAATTTGCTATGATCTACATCGTGCTTGTCATACAACTGATA
ATATTATCCTGATGTTTTATGTATGACTGGTCATACATTGCTGT--TGCCTGTATCAACTCCATATGTGAAATTTATAAA
TTATTTTCTGATGCTGCCTC-TGTAGATAGTAAATCATTTTGCTGTTTTGCTATACTTGTGGAAAAATGTTTTAATTTCT
TAATGTTTCTGATGTATGTGCAGACGAAGCGCACCAAGAAGGCTGGAATCGTTGGCAAATATGGTAAAAACATTGCGGCT
GCCCAGATCATTGTTCAACAACCTCATGAATGTG--TAACTATTGTACTCACGTGTCCTTGTTATTTCAATGTTGTGTAG
GTACCAGGTACGGTGCCAGTCTTCGTAAGCAGATCAAGAAGATGGAGGTCTCCCAGCACTCCAAGTACTTCTGTGAGTTC
TGTGGCAAGGTAAATCTTTCGATGGTTTTATTGATT-----ACTTGCGTTGTGTTTAGAATGGTAAAGTGTCTGCTGGTG
GTTCAACTGAGCATC--TATGTTGTATGACAAGTGTTTTTGGCATTTGGCTACATTGAAATTAGCACA-TATCTTTTTGT
GAGTAAAAAAATGCAGCATAATTGTATAGGTTATGTGCTCTTGTTTTGCATGATGATGGT--------------------
--------------------------------TTAGAGGATAACTACTTGGTTCTAATATGCTGAATTGCTGGTTGGCAA
AACATAAAGAATTTATATTGTAGGCTGTTGTAA-------CCCTTTGTATTGTCATGAGTTGTTTGAGTTTAATGCCTGC
TGCGTCTTTTAACCAC--TGGCCTTCTAGATAGGGAACAATGAACAACGGCTTTTGATTGTTTTGTATGATGAACGTTTA
TAACTCTCAAATGATTTAGTTTAATATTACCCACTTGCTGATTGGCAGAATATGAAGAATTGTTATTGCAGGCTGTTGCA
GTCCTTTCTATTGTCATTGGACATGCATATGGATTTTGTAACCCTGTTAAGTTTAATGCTTATTGCTTCTTTTAACACTT
GTAGACCTCTAGATATGGAACAGCGCCCACCAGCTCT--TTATTCTAGTCTCTTTACACATTTCCAGCCCTATGGAAATG
ATGATAGCATCGATAACTC-ATAGATAGGTCAATAGTGATAACATGTTAGTCTCCTCGCTTGATTCAATGTTTCTTTTAT
CTTAACACGTTCTTGATTCACAGTTTGCCGTGAAGAGGAAAGCAGTCGGAATCTGGGGATGCAAGGACTGCGGGAAGGTT
AAGGCCGGTGGTGCCTATACCATGAAGTACGTGCTGATGCCAATTACACACTGTATATT-TCCAAATAGCTCATTGTCCT
GCTCTACCATATGTGCTCATCTTGTTGTTCTGCATTTCCAGCACTGCCAGTGCGGTCACTGTCAGGAGCACGATCCGTCG
CCTGAGGGAGCAGACTGAAGCTTGA-------------------------------------------------------
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>chr1A_1_TraesCS1A01G386300
TGGTCGCCAGATGCCACACATGCATAAAAGAGGACATGCACGCCGCATTTACCGCATGAATTGGCTAAAATGGAACTGTG
TGCTGATTGCCTCTAATTAAATAGATTTATGTGTTGGCTTATGAAAATTAGCTGGAGAGGGGCACGCATGCATTTATTTG
GGCAATTTCGGATCTTCTTCCGTCCTTGCAATGTGGGGCAAGATATTTGGGG-ACACAATGCATACTTTTTTTA------
----------------------TTAACTTTGTGTGCATGCCCTTTTTAATTAACTTTGTTTATTAATTATTCTGGCGCAC
TTTAATTAGGAATCTAATAATGTCCG----TCAGGTACGAACAGATGACAAATCAAACA-TTTTTATGACGAATTTAGTG
ACCCGAGGGTGATAAT-------------------------TTTAGTTAGCAAGCA-TGCTAACTTCATGTTTCAATTTA
TTTTTGACAGAGAATTGCCTTGTGTGT---CTAACTTGCCATCCTTGTGTCAAGAATTGCTATCGAAAATGTTCGATGTG
CCATGTGCTCATACCTGACATCAGGTACTTATCAT-TCATGTTAATTTATTCATGCATTGTGCTATCGAAAGTATGGTAT
AGAAATCATACCAAAAGTATTGTATCTATAGTATGGTTCTTAATTCATCGAGGCGTCTGCCTCCCTGCGGCATGATAGAT
GTCTTGATGAGCAGGTCAATTATTACTCCCGTTGCAACGCACGGGCATATGTCCTAGTAACAATAATAATTGAATTTTGG
TGTTTCTTAACTCTCATGTGGCCCATAGTCTAGTTGGGCTACACCTCAC-TTTTTTTTAGTGGTTACACCTAGCTTTATG
GGCTAA--GTAGGATTGATAAGCCTTAGCCCAGCCCACCGGCGCAGCAACGAGGCCCATCCGTGTTCCCACACGTATAAG
ACCTAGCACGCCGCCTCCATTCCGAGACCTCTCGCCCGCG---CCGCCGCCTCCCTGCCCTCTTTGCCGCCGCCGCCCGT
TGC------------CGCGGACGCCTCCTCCTCGCCGGCGAGATGGTACGCTCTCCCCTCACTGTTACCTATGGCGGCTC
TGATCCGTGCTCCTCCGTATGCCGTGTTTCAGCCTTCGTGCCTGCCTGTG--GGGTGTAGGAAGCATCTAGGTTTGCGAT
TGTCTGAGTGGCTTGCACACGGGGATCTATGAATAAGGATTCGAAATTACTAGTCTTTCTCGTGGTTTTGGTCTGCTTCG
CTGAGAAATCATCCTTGAAGCCGTAGCATCTGTCAGATCTAGAGTAAACTTGCCGGCGGCTTTATTTTTCATCTGGTGTT
GCTTGGTAAGATTTGCGGCTTGCCCAATTATACTG----TATTATGAAGTGGTCAAAGAGGATGTTAAGGTGTTCCTATA
GTTAGATTTTCCACTTCTGGGACCGGTTTTACTAATATGATATGCTCAGTGGTGGAC---TAATTGCCATAAAATGGAAG
TATGAAACTTTGATGCTATCCTTGGTTTGTTATAGTTATCTATTAGCATGGATGCAACTCTTACCGTTTGCTCCAAGATT
TACCACTAGAAATCTGAGCTTCAGCCTTCATTTTTCCAAAGCTCGATTGGTTAGCATGAGGCCTTGGGCAGCACTAGTTA
TTTCCTCACTGTTGTGTTCATTCT-----ATACATTGCTAATTTGCTATGATCTACATCGTGCTTGTCATACAACTGATA
ATATTATCCTGATGTTTTATGTATGACTGGTCATACATTGCTGT--TGCCTGTATCAACTCCATATGTGAAATTTATAAA
TTATTTTCTGATGCTGCCTC-TGTAGATAGTAAATCATTTTGCTGTTTTGCTATACTTGTGGAAAAATGTTTTAATTTCT
TAATGTTTCTGATGTATGTGCAGACGAAGCGCACCAAGAAGGCTGGAATCGTTGGCAAATATGGTAAAAACATTGCGGCT
GCCCAGATCATTGTTCAACAACCTCATGAATGTG--TAACTATTGTACTCACGTGTCCTTGTTATTTCAATGTTGTGTAG
GTACCAGGTACGGTGCCAGTCTTCGTAAGCAGATCAAGAAGATGGAGGTCTCCCAGCACTCCAAGTACTTCTGTGAGTTC
TGTGGCAAGGTAAATCTTTCGATGGTTTTATTGATT-----ACTTGCGTTGTGTTTAGAATGGTAAAGTGTCTGCTGGTG
GTTCAACTGAGCATC--TATGTTGTATGACAAGTGTTTTTGGCATTTGGCTACATTGAAATTAGCACA-TATCTTTTTGT
GAGTAAAAAAATGCAGCATAATTGTATAGGTTATGTGCTCTTGTTTTGCATGATGATGGT--------------------
--------------------------------TTAGAGGATAACTACTTGGTTCTAATATGCTGAATTGCTGGTTGGCAA
AACATAAAGAATTTATATTGTAGGCTGTTGTAA-------CCCTTTGTATTGTCATGAGTTGTTTGAGTTTAATGCCTGC
TGCGTCTTTTAACCAC--TGGCCTTCTAGATAGGGAACAATGAACAACGGCTTTTGATTGTTTTGTATGATGAACGTTTA
TAACTCTCAAATGATTTAGTTTAATATTACCCACTTGCTGATTGGCAGAATATGAAGAATTGTTATTGCAGGCTGTTGCA
GTCCTTTCTATTGTCATTGGACATGCATATGGATTTTGTAACCCTGTTAAGTTTAATGCTTATTGCTTCTTTTAACACTT
GTAGACCTCTAGATATGGAACAGCGCCCACCAGCTCT--TTATTCTAGTCTCTTTACACATTTCCAGCCCTATGGAAATG
ATGATAGCATCGATAACTC-ATAGATAGGTCAATAGTGATAACATGTTAGTCTCCTCGCTTGATTCAATGTTTCTTTTAT
CTTAACACGTTCTTGATTCACAGTTTGCCGTGAAGAGGAAAGCAGTCGGAATCTGGGGATGCAAGGACTGCGGGAAGGTT
AAGGCCGGTGGTGCCTATACCATGAAGTACGTGCTGATGCCAATTACACACTGTATATT-TCCAAATAGCTCATTGTCCT
GCTCTACCATATGTGCTCATCTTGTTGTTCTGCATTTCCAGCACTGCCAGTGCGGTCACTGTCAGGAGCACGATCCGTCG
CCTGAGGGAGCAGACTGAAGCTTGATCGCGGTCGATCTGACCAAGGAGCCTTTGGATTTTGTAGTTCAGACGAGACTCGT
GCAACGCTATGTAGCCTAAATTGACAACATACAATGTTATTTATCGGCTTGTT-GGGTTCTGAAAGTATCCGGCTACGCT
AAAATGTGTATCTCGTTTATCGTGCTTAGTTGATCGTCTGAAGGTACTCTTTGTGTGTGTCGTTGGTTCTTGAATCTTGA
TGCTATTGTCATCTGTTATTAGAAGAACTAGCAGGGCAGCCTGTGCATCTGTGCGTCTATTTGCATATACTTTAGCTGTT
GTTCATATAGACTGGAAATGTTTTGAACAGAAAATTTACTTGACTTGACTGACGGGATTGCACTCATGTATCTTTGCTTT
ATTGTTCATGTTAATTACGTAGCTTAATCACATTGCAATTTGCTTTTGCCATAATATTTTCTTAATGTCATGAAGTTCCT
GGAGGGAAAGTTAGTGCTTGTCCAATCCTGCTGAAGTATACAAATTGTCTTCGTGTCATTAAATACCCTGGGCCATTACT
CTTATATAAACTCCCAGATGTCACATTCGCATTGCTTCTGGGACTGTTATGAAGGTCATCGTTGCTTC------------
----------------TGATGCAATTGCCCAGTTTGGACAATTGCTTGTGTATCACTAATTTAGCT-------------G
ATCAAGAGATACTTTGCTGGTGGGGATAAGGTTAGGAGAAAGATCTTTGATTTTTAAATATAAGCCCCATGACCCAGACT
TGTTTATCTGCTGGCGTTTCGCCCTT--TTTGGAAAGGAGTATCATGAGCTACTAAAGCAGTTAAATTAGGTTACCCGGC
TAAA---------TTAGGAGGACTAGTCGGTTGGCCCTACATA---------TATATTCTTGCAAATGAACACATTGTTA
CTCATGTTCATGTTCCTACTGTTTGGAAATGAACTGTTCCTCC-------------------------TACTTGATCATG
TTTGATTTCATATGTATATTCACATGTATTTTTAGTTCTAGTTCGCATGTTCAAATTTCATAGAGTATAATC
>chr3D_1
TGGTCGCCAGAAGCCACACATGCATAAACGAGGACATGCACGCCGCATTTACCGCATGAATTGGCTAAAATGGAACTGTG
TGCCGGTTGCCTCTAATTAGATAGATTTATATGTTGGCTTATGAAAATTAGCTGGAGAGGGGTACGCATGCATTTATTTG
GGCAATTTCGGATCTTCTTCCGTCCTTGCAATGTGGGGCAAGATATTTGGGG-ACACAATGCATATTTTTTTTA------
----------------------TTAACTTTGTGTGCATATCCTTTTTAGTTAACTTTGTTTATTAATTATTCTAGCGCAC
TTTAATTAGGAATCTGATAATGTCCG----TCGGGTACGAACACATGACAAATCAAACA-TTTTTATGGCGAATTTAGTG
ACCCGAGGATGATAAT-------------------------TTTAGTTAGCAAGCA-TGCTAACTTCATGTTTCAGTTTA
TTTTTGACAGAGAATTATCGTGTGTGT---CTAACTTGCCATCCTTGTGTCAAGAATTGCTATCGAAAATGTTCGATGTG
CCATGTGCTCATACCTGACATCAGGTACTTATCAT-T-ATGTTAATTTATTCATGTATTGTGCTATCGAAAGTATGGTAT
AGAAATCATACCAAAAGTATTGTATCTATAGTATGGTCCTTAATTCATCGAGGCGTCTGCCTCCTTGCAGCATGATAGAT
GTTTTGATGAGCAGGTCAATTATTACTCCCGTTGCAACGTACGGGCATATGTCCTAGTAA--------------------
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>chr6A_1
TGGTCGCCAGATGCCACACATGCATAAAAGAGGACATGCACGCCGCATTTACCGCATGAATTGGCTAAAATGGAATTGTG
TGCTGATTGCCTCTAATTAAATAGATTTATGTGTTGGCTTATGAAAATTAGCTGGAGAGGGGCACGCATGCATTTATTTG
GGGAATTTCGGATCTTCTTCCGTCCTTGCAATGTGGGGCAAGATATTTGGGG-ACACAATGCATACTTTTTTTAATTAAC
TTTGTGTGCACACCCTTTTTAGTTAACTTTGTGTGCATGCCCTTTTTAATTAACTTTGTTTATTAATTATTCTGGCGCAC
TTTAATTAGGAATCTGATAATGTCCG----TCGGGTACGAACAAATGACAAATCAAACA-TTTTTATGGCGAATTTAGTG
ACCCGAGGGTGATAAT-------------------------TTTAGTTAGCAAGCA-TGCTAACTTCATGTTTCAATTTA
TTTTTGACATAGAATTGCCGTGTGTGT---CTAACTTGCCATCCTTGTGTCAAGAATTGCTATCGAAAATGTTCGATGTG
CCATGTGCTCATACTTGACATCAGGTACTTATCATTT-ATGTTAATTTATTCATGTATTGTGCTATCGAAAGTATGGTAT
AGAAATCATACCAAAAGTATTGTATCTATAGTATGGTTCTTAATTCATCGAGGTGTCTGCCTCCCTGCGACATGATAGAT
GTTTTGATGAGCAGGTCAATTATTACTCCCGTTGCAACGCACGGGCATATGTCCTAGTA---------------------
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>chr3A_1
TGGTCGCCAGATGCCACACATGCATAAAAGAGGACATGCACGCCGCATTTACCGCATGAATTGGCTAAAATGGAACTGTG
TGCTGATTGGCTCTAATTAAATAGATTTATGTGTTGGCTTATGAAAATTAGCTGGAGAGGGGCACGCATGCATTTATTTG
GGCAATTTCGGATCTTCTTCCGTCCTTGCAATGTGGGGCAAGATATTTGGGG-ACACAATGCATACTTTTCTTTATTAGC
TTTGTGTGCATACCCTTTTTAGTTAACTTTGTGTGCATGCCCTTTTTAATTAACTTTGTTTATTAATTATTCTGGCGCAC
TTTAATTAGTAATCTGACAATGTCCG----TCGGGTACGAACAAATGACAAATCAAACA-TTTTTATGGTGAATTTAGTG
ACCCGAGGGAGATAAT-------------------------TTTAGTTAGCAAGCA-TGCTAACTTCATGTTTCAATTTA
TTTTTGACAGAGAATTGCCTTGTGTGT---CTAACTTGCCATCCTTGTGTCAAGAATTGCTATCAAAAATGTTCGATGTG
CCATGTGCTCATACCTGACATCAGGTACTTATCATTT-ATGTTAATTTATTCATGTATTGTGCTATCGAAAGTATGGTAT
AGAAATTATACCAAAAGTATTGTATCTATAGTATGGTTCCTAATTCATCGAGGCGTCTGCCTCCCTGCGGCATGATAGAT
GTTTTGATGAGCAGGTCAATTATTACTCCCGTTGCAACGCACGGGCATATGTCCTA------------------------
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>chr4A_117
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------------------------------------GCTTATGAAAATTAGCTAGAGAGGGGCACGCTTGCATTTATTTG
GGCAGCTTCGGATCTTCTTCCGTCCTTGCAATGTGGGGCAAGATATTTGGGCAACACAATGCATACTTTTTTTAGTTAAC
TTTGTGTGCATGACT---------------------------TTTTTAATTAACTTTGTTTATTAATTATTCCGGGGCAC
TTTAATTAGGAACCAGATAATGTCCGAACATCGGGTACGAACACATGACAAATCAAATGTTTTTTATGGCAAGTTTAGTG
CCGCGAGGGTGATAACTTTTTTTTTAAGCTAGGGTGATAACTTTAGTTAGCAAGCAATGCTAACTTCATGTTTCAGTTTA
TTTTTGACAAAGAATTGCCGTGTGTGTTCACTAACTTGCCATCTTTGTGTCAACAATTGCTATAAAAAATGTTCGAT-TG
CCATGTGCTCGTACCTAACATCAGGTACTTATCATTTC-TGTTAATTTATTCATGTATTGTGCTATCGAAAGTATCGTAT
AGAAATCGTACCAAAAGTATTGTATCTGTAATATGGTTCTTAATTCATGGAGGCATGTGCCTCCTTGCGGCATGATGGAC
ATTTTGATGAGCAGGTCAATTATTACTCCCGTTGCAACGCACGGGCATATGTCCTAGTGATCAAT---------------
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>chr1B_715
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----------------------------------------------------------AAAAATAATAATTGAATTTTGG
TGTTTCTAAACTCTCATCTGGCCCATAGCCCAGTTGGGCTACACCTCGC-TTTTTTT-AGGAGTTACACCTAGCTTTATG
GGCTAAAAGTAGGAATGATAAGCCTTAGCCCAGCCCACCGGCGCAGCAACGAGGCCCATCCGTGTTCACACACGTATAAG
ACCTACCACGCCGCCTCCATTCCGAGACCTCTCGCCCGCG---CCGCCGCCTCCCTGCCCTCTTTGCCGCCGCCGCCGCC
GCC------CGTTGTTGCGGACGCCTCCTCCTCGCTGACGAGATGGTACGCTCTCCCCTCACTCCTATCTACGGCGGCTC
TGATCCGTGCTCCTCTGGATGCCGAGTTTCAGCCTTCGTGCCTGCGTGTGTGGGGTGTGGGAATCATCTAGGTTTACGGT
TGTGCGAGTAGCTTTTACACGGGGATCTAGAAACAAGGATTCGAAATTACTAGTTTTT-TCGTGGTTTTGGTCTGTACCG
CTGAGAAATCATCCTTGGAGCCGTAACATCTGTCAGATCTGGAGCGAATTTGCCGGCTGCCCTTTTCCTGTTC-------
---------GATTTGCAGCTAGCTCGAATCATACTGTATTATTATTGCGTGGTCGAAGAGGATGTTAAGATGTTGCTGTA
GTTAGTTTTTCCACTTATGGGACCGGTTTTACTAATATGTTATGATCAGTGGTGGAGTAATAATTGCCATAAAATGGAAG
TATGAAACCTTGATGCTATCCTTGATTTGTTACAGTTATCTATGAGTATGTATGCAACTTCCACCGTTTGCTACAATATT
TACCACTATAAATCTGAGCTTCAACCTTCATTTCTCCAAAGCTTGATTGGTTAGCATGAGGCCTTGGGCAGCACTAGTTC
CTTACTCACTATTGGGTGCATTCTATGACATACATTGCTAATTTGCGATCATCTACATCATGCTTGTCATACTACTGATA
ATACTATCCTGATGTTTTATGTATGACTGGTCATACATTGCTGTTTTGCCTGTATCAATTCGATATGTGAAATTTC----
------------------------------------------------TGCTATACTTGTGGAAAAATGTTTTAATTTCT
TA-TGTTTCTGATGTATGTGCAGACGAAGCGCACCAAGAAGGCTGGAATCGTTGGCAAATATGGTAAAAACATTGCAGCT
GCCCAGATCATTGTTCAACGATCTCATGGATCTATCTAACTGTTGTGCTCATGTGTCCTAGTTATGTCAATGTTGTGTAG
GTACAAGGTACGGTGCCAGTCTGCGTAAGCAGATCAAGAAGATGGAGGTCTCCCAGCACTCCAAGTACTTCTGTGAGTTC
TGTGGCAAGGTAAATCTGTCAATGGTTTTATCGATTACAGTACTTGCGTTGATTATAGAATGCTAAACTGTCAGCTGGTG
GTTGAACTGTGCATC--TATGTTGTATGACAAGTGTTTTTGGCATTTGGCTAGATTGAAATTCGCATCTTATCTTTCTGT
GAGTAAAAAAA-GCAGCATAATGGTATAGGTTATTTGCT--------GCATGGTGATGGTTTAAAGGATAACTAAGTTTT
TAAGCTGGATTGCTGATTGGCAAAACATAAAGTTAGAGGATAACTACTTAGTTTTAATATACTGAATTACTGATTGGCAA
AACATAAAGAATTTATATTGTAGGCTGTTGCAA-------CCCTTTT-----TCACGAGTTGTTTGGGTTTACTTCCTGT
TGTGTCTTTTAACCACTGTAGCCTTCTAGATAGGGAACAAAGAACGACAGCTTTTGATTGTTTTGTATGATGAACATTTA
TAACTCTCAAATGATTTAGTTTAATATTACCAAATTGCTGATTGGCAGAATATAAAGAATTATTATTTCAGGCTGTTGCA
GTCCTTTGCATTGTCATTGGACATGCATATGGATTTTGTAACCCCA-TAAATTTAATGCTTATTGCTTCTTTTAACAATT
GTAGCCTTCTAGATATGGAACAGTGCCCACCAGCTCT--TTATTCTAGTCACTTTACACAATTCCAGCCCTATGGAAATG
ATGATAGCATTGATAACTCAATAGATAGGTCAATAGTGATAACTTGTTAGTCTCCCCGCTTGATTCAATGTTTATTTTAT
CTCATCACGTTCTTGATTCACAGTTTGCCGTGAAGAGGAAAGCAGTCGGAATCTGGGGATGCAAGGACTGTGGGAAGGTT
AAGGCCGGTGGTGCCTATACCATGAAGTACGTGCTGATGCCAATTACACACTGTATATTTTCCAAATAGCTCATTGTCCT
GCTCCACCATATGTGCTCATTTTGTTGTTCTGCATTTCCAGCACCGCCAGTGCGGTCACTGTCAGGAGCACGATCCGTCG
CCTGAGGGAGCAGACTGAAGCTTGATCGCGGTCAATCTGACAAAGGAGCCTCTGGATTTTGTAGTTCAGACGAGACTCAT
TCGACGCAATATAGCCTAAATTGACAACATACAATGTTATTTATCGGCTTGTTGGGGTTCTGAATGTATCCAGCTACGTT
ACAATGTGTGTCTCGTTTATCGTGCTTAGTTGATTGTCTAAGGGTATTCGTTGTGTGTGTCGTTGGTTCTTGAATCTTAA
TGCTATTGTCATCTGTTCTTAGAAGAACTAGCGGGGCCGCCTGTGCATTTGTGCTTCTATTTGCATTGACTTTAGCTGTT
GTTCATATAAATTGAACATGTTTCGAACAGAAAATTTACTTGACTTGACCGTCAGGATTGCCCTCA--------------
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>chr1D_718
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-------------------------------------------------------------AATAATAATTGAATTTTGG
TGTTCCTAAACTCCCATGTGGCCCATAGTCCAGTTGGGCTACAACTCGCTTTTTTTT-AGGGGCTACACCTAGCTTTATG
GTC--AAAGTAGGAATAATAAGCCTTAGCCCAGCCCACCAGCGCAGCAACGAGGCCCATCCGTGTTCCCACACGTATAAG
ACCTAGCACGCGGCCTCCATTCCGAGACCTCTCGCCCGCGCCGCCGCCGCCTCCCTGCCCTCTTTGCCGCCGCCGCCGCC
GCCGCCGCCCGTTGTCGCGGACGCCTCCTCCTCGCCGAAGAGATGGTACGCTCTCCCCTCACTCCTATCTACGGCGGCTC
TGATCCGTGCTCCTCTGGATGCAGAGTTTCAGCCTTCGTGCCTGTCTGTGTGGGGTGCGGGAATCATCTAGGTTTACGGT
CGTGTGAGTGGCTTATACTCGGGGATCTAGAAATAAGGATCCGAAATTACTAGTTTTTCTCGTGGTTTTGGTCTGCTTCG
CTGAGAAATCATCCTTGAAGCCGTAACATCTGTCAGATCTGGAGTGAATTTGCCGGCGGCCCTTTTCCTGTTCTAGTGTT
TCTTGGTACGATTTGTGGCTAGCTCGAATCGTACTGTATTATTATTGCGTTGTCAAAGAGGATGTTAAGATGTTGCTATA
GTTAGATTTTCCACTTATGGGACCGGTTTTACTAATGTGATATGCTTAGTGGTGGAG---TAATTGCCATAGAATGGAAG
TATGGAGCTTTGATGGTATCCTTGATTTGTTACAGTTATTTATCAGTATGTATGCAACTTCTACCGTTTGCTACAATATT
TACCAGTAGAAATCCGAGCTTCAGCCTTCATTTTTCCCAAGCTCGATTGGTTAGCATGAGGCCTTGGGCAGCACTAGTTC
TCTCCTCACTATTGTGTGCATTCTATGACATACATTGCTAATTTGCGATGATCTACATCATGCTTGTCATACAACTGATA
GTATTATCCTGACGTTTTATGTACGACTGGTCATACATTGCTGT--TGCCTGTGTCAACTCCATATGTGAAATTTATACA
TC-TTTTCTGATGCTGCCTTTTGTAGATAGCAGCTCATTTTGCTGTTTTACTATACTTGTGGGAAAATGTTTTAATTTCT
TAGTGTTTCTGATGTATTTGCAGACGAAGCGCACCAAGAAGGCTGGAATCGTTGGCAAATATGGTAAAAACATTGCGGCT
GCCCAGATCATTGTTCAATGATCTCATGAATGTAGCTAACT-TTGTGCTCACGTATCCTT----------TGTTGTGTAG
GTACCAGGTACGGTGCCAGTCTGCGTAAGCAGATCAAGAAGATGGAGGTCTCCCAGCACTCCAAGTACTTCTGTGAGTTC
TGCGGCAAGGTAAATCTGTCAATGGCTTTATCGATTAC-----TTGCGTTGTTTTTAGAATGGTAAAGTGTCTGCTGGTG
GTTCAACTGTGCTGTCTTATGTTGTATGACAAGTGTTTTTGGCATTTGGCCAGATTGAAATTAGCATATTATCTTTCTGT
---------------GCATAATGGTATAGGTTATTTGCTCTTGCTTTTCATGATGATGGT--------------------
--------------------------------TTAGAGGATACCTACTTGGTTTTAATATGCTGAACTGCTGGTTGGCAA
AACATAAAGAATGTATATTGTAGGCTGTTGCAACTTGCAACCCTTTGTATTGTCATGAGTTGTTTGGATTTACTTCATGT
TGCGTCTTTTAACCACTGTGGCCTTCTAGATAGGGAACAATGAACAACAGC-TTTGATTGTTTTGTATGATGAACCTTTA
TAACTCTCAAATGATTTAGTTTAATATTACCGAACAGCTTTTGATT----------------------------------
-------------------GACATGTATATGGATTTTGCAACCTCC-TAACTTTAATGCTTATTGCTTCTTTTAACAATT
GTAGATTTCTAGATATGGAACAGCGCCCGCCAGTTCTCTTTATTCTAGTCACTTTACACAATTCTAGCCATATGGAAATG
ATGATAACATCAATAGCTC-ATAGATAGGTCAATAGTGATAAGCTGTTAGTCTCCTCGCATGATTCAATCTTCTTTTTAT
GTTAACACGTTCTTGATTCACAGTTTGCCGTGAAGAGGAAAGCAGTCGGAATCTGGGGATGCAAGGACTGCGGGAAGGTT
AAGGCCGGTGGTGCCTATACCATGAAGTATGTGCTGATGCCAGTTACACACTGTATATT-TCCAAATAGCTCATTGTCCT
GCTCTACCATATGTGCTCATTTTGTTGTTCTGCATTTCCAGCACTGCAAGTGCGGTCACTGTCAGGAGCACGATCCGTCG
CCTGAGGGAGCAGACTGAAGCTTGATCGCGGTCAATCTGACAAAGGAGCCTTTGGATTTTGTAGTTCAGACGAGACTCAT
TCGACGCAATGTAGCCTAAATTGACAGCATACAATGTTATTTATCGGCTTGTT-GGGTTCTGAGAGTATCTGGCTACGTT
ACAATGTGTATCTCGTTTATGTTGCTTAGATGATCGTCTGACTGTACTCTTTGTGCGTGTCGTTGATTCTTGAATCTTAA
TGCTATTGTCATCTGTTATTCGATGAACTAGCAGGGCAGCCTGTGCATTTGCGCGTCTATTTGCATAGAC--TAGCTGTT
GTTCATATAAACTGGAAATGTTTTGAAGAGAAAATTTACTTGACTTGACCGTCAGGATTGCCCTCACATAGTTCCTGGCT
CTCGAGGGCTCG--------------------------------------------------------------------
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------TAATCTCCCAGATGTCACGTTCACTTTGCTTGTGGGACAATTATGAAGGTCATCATAGACGCACATTGCTTGGG
ACAAGTATTAACCTTGTGATACAATTACACAGTTGGGACAATTGCTTATGTATCACCAAGTTAGCCGATCTGAATCATCG
ATGAAGAGATACTTTGCTGATGTGGATATACTTTGGAGAAAGATGATTGATTTTTAAGTACAAGACCCATG---------
-----ATCTGCTGGTGCTTCGCCCCCCCTTTGTAAAGGAGTATCATGGGCTACTAAAGCAGCTAAATTTAAGGAATAGGA
AACAAGTAAAGTTTTAGGAGGAATAGTGGCCATTCAGTAAAGTGCCATATACTATATTCTTGCGAATGAACATTC-----
------------------CTGTTTGGAAATTAACTGTACTTTTTTTTCCCGAGGGTGGAAATTAACTGTACTTGATCATG
TTTGATTTCATATGTATATTCACATATATTTTTAGTTTTAGTCCTCATGTTTAAATTTCATA----------
>SNPs
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---------------S----------------S----------S------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--S---------------------------------------------------------S-------------------
-------S----------------------S----------------S---------S--S-------------------
--------------S-----------------------------------------------------------------
-----------------------------------------------------------------------------SSS
SS-----------------------------------S-------------------------SS--S---S--------
---------------S-S------S---------------------------------S----S-----------S--S-
---S----------SS-------------SS-----------------------S-------------------------
-------------------------S--------------S----S--S-----------SS-S--SS-SS---S-----
S-------S-----------S--S-S-S-SSSSSS----------SSS---------------------S----S-----
----------------S---------------------------------------S-----------------------
------------------------S-------S----------S--S---S--------SS-----------S---S---
-------------------------------------------------------------------------------S
----------S------S----------------------------S------------S--------------------
------------------------------------------------------------------------------S-
-SS----------------S----------S-SS----------------------------------------------
--S-----------------------------------------------------------------------------
-------------------S-S-----------S-------S----S------------------S--------------
----------------------S---------------------------------------------------------
-----------------S--S----------S--------------------S---------------------------
---------S------------------------------------------S-------------S---------S---
-----------S----------S-----------S--------S------------------------------------
-----------------------------------------------------S--------------------------
------------------------------S-----------------------------------S-----S-S----S
------------------------------------------------S--------------------------S----
-------------------------------S-S-------------------S-------S-----S------------
-------SS-----------------------------------SSS---S--------------------------S--
------S-------------------------------------------S---------S-------------------
-------------------------------------------S-----------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
---------------------------------S-------S------------------------------------S-
S-S----S----------------------------------------------------------------------S-
-S---------------------------------------S------------------------------------S-
------------------------------------------------S------------------S------------
---------S---------------------------------------S-S-S-------S----SS--SS-SSSSSS-
S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS---S--------------S---S-S------S------SS--------------S-S-SSS-------------
--------------------S-----S-S-----S------------S--------S--S-----S--------------
--S----------------S--S-----SSS--S----------SS-----------S--S---S------SSSSSSSSS
SSSSS---------S-S-------SS------S--------------S-------------S------SSSSS-SSS--S
S-S-------------------S----S-SSSSS-SS--S-SS--------------------S--------SSSSSSSS
SSSSSSSSSSSSSSSSSS------------S------S-S-SS-------------------------------------
-------------------------S-----------S----S-S------S----------SSSSSSSSSS
>forward_723
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---------------------------------------------------------------CCTGCGGCATGATAGAT
GTC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2555
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--------------------------------------------------------------------------GCCTGC
TGCGTCTTTTAACC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>forward_1351
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---------------------------------------------------GCCGGCGGCTTTATTTTTCA---------
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>reverse_2560
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-------------------------------------------------------------------------------C
TGCGTCTTTTAACCACTGGC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>forward_1384
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----GGTAAGATTTGCGGCTTGCC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2708
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-------------------------------------------------------------------GCAGGCTGTTGCA
GTCCTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>forward_1386
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------TAAGATTTGCGGCTTGCCCA------------------------------------------------------
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>reverse_2807
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------CTCTAGATATGGAACAGCGCCC----------------------------------------------------
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>forward_2729
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---------------------------------------------------------------------AGGCTGTTGCA
GTCCTTTCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3981
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------------------------------------------------------------TAAGCCCCATGACCCAGACT
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------
