>input_sequence_38558
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--------ATGGGGGTCGGCATGAGCAGCGGCCGGCAGGACTTCGCCGGCCGGACGCTGCCGCTGTTGGCTGTGCAGATG
CTTCTACAGTACGGCCCGGCCGGCGCAAGCCGCCCGCCCCTGACGGCCGCGCTGGTCGCCGCCAACGCGCTGGTGTACTT
CCGCCCGGGCGCCGTCGACGCGCACCTACCCCGGCTCCGGCACGTCATGTTCAACCCCCACCTCATCATCAAGGTACCCA
CCTACACCACCACGCCTCAACCGGCTGATATTTTTAGGGCTAATGGCAGGTGCTCTGCCTCTGCATTATAGATTAGGCAT
TTACAAGAGAAAAGTCTGAAGCCCTAAGGCAGACAGGGAAAAACAGCACATTTA------------CCTTGAATAGGCCA
TATCCAAGTATGTTAAG-CAGACCTGACTAAGCAACCGGCTGATTAGATGGCGGAATTATGTGTATGCTATCTTTTCTTT
TGCGATGGAATTATGTTTGGATTCAGTTGGCTACTGAACAAATTACATTGAGCACCCTTATCCAGGGGTACAGGGTTGCG
GAGTTCAGCACCACATTATGTTGTGCCCATATTTTTGTCTCTGGTTGCCGCATTGTTGGGTTTAGCTAATACTCCCTCGG
TCCCAAAATTCTTGTCTTAGATTTGTCTAGATACGGATGTGTATA-----------------------ACACTAAAATGT
CACTAGATACATCCGTATCTAGACAAATCTAAGACAAGA------------ATTTTGGGACGGAGGGAGTAAAACTTAAG
CTTTTGATCTACCTAGCTTGCAATTGGGCCAAATTTATAAGATGATTACTGAGCAATGCTGCATAGGAGCAGGATTCCGA
CCCTAATTATAATTGGGATTCCCTATTGGTAGTATCTGGTAACAATACTCTATTAGAGTTGGTTAAATTTTCTCTTATTT
AGTTAAACATAACGCTGTTGAAGCACAGATTGACCCTATGTTTGTATACAAGTTTAGGGACTC----GTCCAGTTGTCTA
GATCATGGATCAAAATGACATTTTCGCACACACACAAAAAGGATCTAAATGACATGATGCGCAAGTTTTGCACCCCATGC
CCATGGCTCACTTTACA------GAATTGGTAAAATGCACGCTACACCATTCGCAATGTTGTGCTTCTCCTGTTGCATTG
TTTCCCTACCAGCAGGGTGCAGATGATGTGCTTTGAATGTCGTACTGCAAGTAATTGCAAGTTGTTCTTTTCAGACTTTT
CTAAGCATCATTTCCAGAGTTTTATATATCCACCACTCTCAAAAA---TAACAGTTATGAACATTGGTGCAGTTCGGTGA
CCTGAGACGTTTCTTCCTCTCAGCTTTCTACCACTTGTGTGAAGGTCACTTCTTCATGAACATGGCTTCTCTCTTGCGCA
CGGGGGCAAAGCTTGAAACATCAACTGGCAGTCCTGAGTTTGCTTGCATGGTGGTTTCCTTGCTTGGCCTTTCTCAGGGC
TTCACACTGCTCTTGTCTAAAGGCTTGCTTTCGCTCGGCAACGACAT---------------------------------
-------------------------GGCGTATTATCAATATTCTGCTGGATTTAGTGGAGTGCTGCTTGGCATGAATGTT
GTGCTGAATGCCCGAGAAGGCGATGTTGTCTGGCATGGGGTGACCGTTCCTGCAAAGTATGCGGCATTGCTTGAACTACT
ACTCGTCCATGCTTTCAATCCGGAGGCACACTTGATTTGCAATGTTGGTGGGATACTTGCTGGCCTGGCCTACCTTTTGC
TGAGGCACGGTCCAGAACGGCTCGCTCCCATGTTTTCAGGAATTGCAGACGTTGTGAGTCAGCCGGCGAGATTTGCTAAG
AAACTTCTGAGGTCAGCAGCACATGGTCGGGGGAGCAGTGTCCGGCGCCATGTTGCACCTGCGCAAGAAGAGGTTGGGCA
AGGTATGCGGTGGAGATGCATAACATGTTCTTGTGACAACTCGCGTCACGCAGATGTCTGCGAGATGTGCAGCACTCCGC
ACCCGGACCATGCCTTTTCCCGCAGACGGCATCTCCAAGACGGTGGAAACAACGAGCTCTCAGTCGAGGAGATCCGCCGT
AGGAGGCTTGAAAGATTTGGAGGATGA-----------------------------------------------------
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-------------------------------------------------------------------
>chr3D_1_TraesCS3D01G187100
CGAACAAAGACAGGATCCACGTGGATCCACCGAAGACAAACACCGAACTAATCCCGCGAGATCCGCCAGAGACAAACCTC
CACACGTCTCCGATGATGCTAGAAACACCATCGGAATGAAGACTAGGTGGAGAGAACCTTATTCCATCTTCAGAGAGACG
CCATCGCCTCGACTTTCTGAG-AGGACATAAACCCTAACAAAATTCAAGAAAGCATAAAAAACCGGAGCTCTCCCGCCGG
CAAGGGTCGGGATCTATCGCGCCACCATGGCCCTAAGACCACAGAAGACAAGATAGACCAACAGCGGTAGGG----AGGC
ACGAGAAACCCTAGCCAAATGGTTCTCTTTCTTCCACGGGAAGAAAGAAAATGATAAATTAATTCGTGGATGATATAGTT
TTTATCTCTATTACTTAACGTAAGGTTCCCATTTCACC------------TT----------------------------
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--------------------------------------------------------------------------CTTCCC
ACTACCGCTTCGTCCAACCTTTCATGTATATGATAATCAATCACCTTAATTTACTTACCTTCTAAATCAATTTCACTTTA
ATTTACTTACCAAACTTTTAATCAAAATATAAGGCAATTCACAGGTAGAATTTGATAAATATTTATTTATACAATCGCAT
TATTATTGACAAGTAAATCACAAGCTAACATATTAGAATATTTATATCCCGTTGCAAT-----GGCATTGTTCTAGTAAA
TTTAATCAAACTAGGAAGTTTGACTTGGAAGTTACAAAACTAAAGTTTCAATTGATTTGAAGGAGAGAAAGTATGTTATC
TTTTTTAATAAAAAATGATGGTTATAGCGTAATTGCAGAGTCAGCGTCAATGTCCAAGGCGATGTTTTCTTGCCAAAGAA
TTTATTCTTCTACCATCTAAAAATAAGAGGAAGCAGTATATA----TTCCTGAATCTGAAGAGAGAAAGGGCCTTCGCCA
AGGATTGTCTTGTCAGTAAAAAGAAAAAACAAAGCCTTCGCCACGGGCCTGTCCGTCTTCCGACCACACCGGTCCATCGA
TCTCGGCGATGGGGGTCGGCATGAGCAGCGGCCGGCAGGACTTCGCCGGCCGGACGCTGCCGCTGTTGGCTGTGCAGATG
CTTCTACAGTACGGCCCGGCCGGCGCAAGCCGCCCGCCCCTGACGGCCGCGCTGGTCGCCGCCAACGCGCTGGTGTACTT
CCGCCCGGGCGCCGTCGACGCGCACCTACCCCGGCTCCGGCACGTCATGTTCAACCCCCACCTCATCATCAAGGTACCCA
CCTACACCACCACGCCTCAACCGGCTGATATTTTTAGGGCTAATGGCAGGTGCTCTGCCTCTGCATTATAGATTAGGCAT
TTACAAGAGAAAAGTCTGAAGCCCTAAGGCAGACAGGGAAAAACAGCACATTTA------------CCTTGAATAGGCCA
TATCCAAGTATGTTAAG-CAGACCTGACTAAGCAACCGGCTGATTAGATGGCGGAATTATGTGTATGCTATCTTTTCTTT
TGCGATGGAATTATGTTTGGATTCAGTTGGCTACTGAACAAATTACATTGAGCACCCTTATCCAGGGGTACAGGGTTGCG
GAGTTCAGCACCACATTATGTTGTGCCCATATTTTTGTCTCTGGTTGCCGCATTGTTGGGTTTAGCTAATACTCCCTCGG
TCCCAAAATTCTTGTCTTAGATTTGTCTAGATACGGATGTGTATA-----------------------ACACTAAAATGT
CACTAGATACATCCGTATCTAGACAAATCTAAGACAAGA------------ATTTTGGGACGGAGGGAGTAAAACTTAAG
CTTTTGATCTACCTAGCTTGCAATTGGGCCAAATTTATAAGATGATTACTGAGCAATGCTGCATAGGAGCAGGATTCCGA
CCCTAATTATAATTGGGATTCCCTATTGGTAGTATCTGGTAACAATACTCTATTAGAGTTGGTTAAATTTTCTCTTATTT
AGTTAAACATAACGCTGTTGAAGCACAGATTGACCCTATGTTTGTATACAAGTTTAGGGACTC----GTCCAGTTGTCTA
GATCATGGATCAAAATGACATTTTCGCACACACACAAAAAGGATCTAAATGACATGATGCGCAAGTTTTGCACCCCATGC
CCATGGCTCACTTTACA------GAATTGGTAAAATGCACGCTACACCATTCGCAATGTTGTGCTTCTCCTGTTGCATTG
TTTCCCTACCAGCAGGGTGCAGATGATGTGCTTTGAATGTCGTACTGCAAGTAATTGCAAGTTGTTCTTTTCAGACTTTT
CTAAGCATCATTTCCAGAGTTTTATATATCCACCACTCTCAAAAA---TAACAGTTATGAACATTGGTGCAGTTCGGTGA
CCTGAGACGTTTCTTCCTCTCAGCTTTCTACCACTTGTGTGAAGGTCACTTCTTCATGAACATGGCTTCTCTCTTGCGCA
CGGGGGCAAAGCTTGAAACATCAACTGGCAGTCCTGAGTTTGCTTGCATGGTGGTTTCCTTGCTTGGCCTTTCTCAGGGC
TTCACACTGCTCTTGTCTAAAGGCTTGCTTTCGCTCGGCAACGACAT---------------------------------
-------------------------GGCGTATTATCAATATTCTGCTGGATTTAGTGGAGTGCTGCTTGGCATGAATGTT
GTGCTGAATGCCCGAGAAGGCGATGTTGTCTGGCATGGGGTGACCGTTCCTGCAAAGTATGCGGCATTGCTTGAACTACT
ACTCGTCCATGCTTTCAATCCGGAGGCACACTTGATTTGCAATGTTGGTGGGATACTTGCTGGCCTGGCCTACCTTTTGC
TGAGGCACGGTCCAGAACGGCTCGCTCCCATGTTTTCAGGAATTGCAGACGTTGTGAGTCAGCCGGCGAGATTTGCTAAG
AAACTTCTGAGGTCAGCAGCACATGGTCGGGGGAGCAGTGTCCGGCGCCATGTTGCACCTGCGCAAGAAGAGGTTGGGCA
AGGTATGCGGTGGAGATGCATAACATGTTCTTGTGACAACTCGCGTCACGCAGATGTCTGCGAGATGTGCAGCACTCCGC
ACCCGGACCATGCCTTTTCCCGCAGACGGCATCTCCAAGACGGTGGAAACAACGAGCTCTCAGTCGAGGAGATCCGCCGT
AGGAGGCTTGAAAGATTTGGAGGATGATGTAGTCTGCACCAACA------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CAGCTTCCATAGGGAAGTAGCAATGC
AATATCCAAGTAGTCCGCACGGAGACTGGCATGGCATCTGCCCGTTTTGTGCTAGATAGTTTAGTGATTCTTCGTTCTAC
CATTAGTACGTATTAGTTATATATATGTGGAATGCTTTATGTAATCGAAATTGGTCTTAATCACCGTTGGA-GGCCCGAG
TACTGGTGCTGATATACTAGTTACTCCCTCCATTTCAAAATATAGTGCGCCCGCGCTTCCCGAGGTCCAACTTTGACCAT
AAATTTAGCCAACGAGACCGATTGCGGCGGGAGAAAAAGTTATATAATTGAAAACTTCTTTTGAATACGAATTCACGGGT
ATAACTTTTGCTCCCGCCGTAATCGGTCTTGTTTGTTAAATTTTTGGTCAAAGTTGAAGCACGGGGATAGAGGAATCACT
ATATTTTGAAACGGAGGGAGTATGTTCTTTAGCTTGAATCTTGGACAACCAGAAAGCAGTTTCCCGGTGATGATTTAAAT
TGGTGTTTAGGTGGATAGCTGCAGATTAGACACCTGTTGTGCTTTACACAGGTTTTATTTATATGCATTGCC---TGAGA
GGAGCACTGAATCACTTCTCACCTATCTGTCCGATATGTGAGACCTTTCCGTCTAGTGGAAAGATTCGATTCAGCCTGCC
TGCCAGACAATCTGTTTTCCATCATGCAGATATAGGGATCG--------------------------------------A
TTCTAATTTTTGCGTGTGCTTGCCTGAAAGCACTTGCATAGCATCCCTCAGTGCCAATTTTGTCATCTGATTCGATTCGA
CAGAGAGGCACTTTGATGGGAGTTACTAAAACTGGTGTACGACTGTATAAGACTGCCTGG---TAGACATACAAGCAACA
CGGCATGGATTCTGGCTATGGTTTCATGGTTTGGAACTCATGAAAACTCATCAACTTGCACAATTTTGTACTAG------
---TACAAAGCTTCGAGTTGGTACGTATATTACCCGGGGAAACTCGTATAC----------------
>chr3A_1
CGAACAAAGACAGGATCCACGTGGATCCACCGAAGACGTCT---GAACGAATCCCGCGAGATCCGCCAGAGACAAACTCC
ACACGTCCTCCGATGATGCTAGAAACACCATTAGAATGGAGACTAGATGGAGAGAACCTTATTCCATCTTCAGAGAGCCG
CCTTCACCTCGACTTTCTGAGCAGGACATAAACCCTAACAAAACTCAAGAAATTATGAAAAACCGGAGACCTCCCACCAG
CAAGGGTCGAAATCTATCGCGCCACCATGGCCCTAAGACCACATAAGACGAGGTAGACTGGCGGCAGCACGACGATAGGC
ACGAGAAACCGTAGCCAGATGGTTCTCTTTCTTC------------GAAAACGATAAATTAATTTGTGGATGATGTAGTT
TTTATCTCTACTACTCAACGTAAGGTTCCCATTAGATTCTCATTTCACCTTT----------------------------
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--------------------------------------------------------------------------CTTCTC
ACTATCCCTTCGTCCAACCTTTCATGTATATGATAATCAATCACCTCAATTTACTTACATTCTGAATCAATTCCACTTTG
ATTTACTTACCAAATTTCTAATCAAAATATAAAGTAATTCACATGCAGAATTTGATAAACATTTATTTACACAATCACAT
TATTATTGACAGGTAAATCACAAGCTAACGTATTAAAATATTTATATCTCATTGCAACGCACATGCATTGTTCTAGTAAA
ATTAATCAAACTAGGAAGTTTGACTTGGAAGTTA---AACTAAAGCTTCAATTGATTTGAAGGAGAGAAAGTATGTTATC
--TTTTAATAAAAAATGATGGTTATAGCGTAATTGCAGAGTCAGCGTCAATGTCCAAAACGATGTTTTCTTGCCAAAGAA
TTTATTCTTCTACCATCTAAAAATAAGAGGAAGCAGTATATA----TTGCTGAATCTGAAGAGAGAAAAGGCCTTCGCTA
AGGATTGTCTTGTCAGTAA---GAAAAAACAAAGCCTTCGCCACGGGCCTGTCCGTCTTCCGACCACACCGGTCCATCGA
TCTCGGCGATGGGGATCGGCATGAGCAGCGGCCGGCAGTACTTCGCCGGCCGGACGCTGCCGCTGTTGGCTGTGCAGATG
CTTCTACAGTACGGCCCGGCCGACGCAAGCCGCCCGCCCTTGACGGCCGCGCTGGTCGCCGCCAACGCGCTGGTGTACTT
CCGCCCGGGCGCCGTCGACACGCACCTACCCCGGCTCCGGCACGTCATGTTCAACCCCCATCTCATCATCAAGGTACCCA
CCTACACCACCACGCCTCAACCGGCTGATTTTTTTAGGGCTAATGGCAGGTGCTCTGCCTTCGCATTATAGATTAGACAT
TTACAAGAGAAAGGTCTGAAGCCCTAAGGCAGACAGGGAAAAACAGCACATTTACATAGCTAAATGCCTCGAATAGGCCA
TATCCAAGTATATTAAGTCAGACCTGACTAAGCAACCGGCTGATTAGATGGCGGAATTATGTGCATGTTATCTTTTCTTT
TGCCATGGAATTATGTTTGGATTCAGTTGGCTACTGAACAAATTACATTGAGCACCCTTATCCAGGGGTACAGGGTTGCG
GAGTTCAGCACCACATTATGTTGTGCCGATATTTTTGTCTCCGGTTGCCGCATTGTTGGGTTTAGCTAA-----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAAAACTTATG
CTTTTGATCTGCCTAGCTTGCAATTGGGCGAAATTTATAAGATGATTACTGAGCAATGCTGCATAGGAGCAGGATTCCGA
CCCTAATTATAATTGGGATTCCCTATTGGTAGTATTTGGCAACAATACTCTATTAGAGTTGGCTAAATTTTCTCTTATTT
AGTTCAACATAACGCTGTTGAAGCAGAGATTGACCCTATGTCTGTATACAAGTTTAGGGACTCACTTGTCCAGTTGTCTA
GATCATGGATCAAAATGACATTTTCGCACACACACAAAAAGGATCTAAATGACATGATGCGCAAGTTTTGCACCCCATGC
CCATGGCTCACTTTACA------GAATTGGTAAAATGCACGCTACACCATTCACAATGTTGTGCTTCTCCTGTTGCATTG
TTTCCCTACCAGCAGGGTGCAGATGATGTGCTTTGAATGTCGTACTGCAAGTAATTGCAAGTTGTTCTTTTCAGACTTTT
CTAAGCATCATTTCCAGAGTTTTATATATCCACCACTCTAAAAAGTACTAACAGTTATGAACATTGTTGCAGTTCGGCGA
CCTGAGACGTTTCTTCCTCTCAGCTTTCTACCACTTGAGTGAAGGTCACTTCTTCATGAACATGGCTTCTCTCTTGCGCA
CGGGGGCAAAGCTTGAAACATCAATGGGCAGTCCCGAGTTTGCTTGCATGGTGGTTTCCTTGCTTGGCCTTTCTCAGGGC
TTCACACTGCTCTTGTCTAAGGGCTTGCTTTCGCTCGGCAACGACAT---------------------------------
-------------------------GGCGTATTATCAGTATTCTGCTGGATTTAGTGGAGTGCTGCTTGGCATGAATGTT
GTGCTGAATGCCCGAGAAGGCGATGTTGTCTGGCATGGGGTGACCGTTCCTGCAAAGTATGCGACATTGCTTGAACTAGT
ACTCGTCCATGCTTTCAATCCGGAGGCGCACTTGATTTGCAATGTTGGTGGGATACTTGCTGGCCTGGCCTACCTTTTAC
TGAGGCACGGTCCAGAACGTCTCGTTCCTATGTTTTCAGGCATTGCAGACGTCGTGAGTCAGCCGGCGAGATTTGCTAAG
AAACTTCTAAGGCCAGCAGCACATATTCGGGGGAGCAGTGTCCGGCGCCATGTTGCACCGGCGCAAGAAGAGGTTGGGCA
AGGTATGCGGTGGAGATGCATAACATGTTCTTGTGACAACTCGCGTTACACAGATGTCTGTGAGATGTGCAGCACTCCGC
ACCCGGACCATGCCTTTTCCCGCAGACGGCATCTCCAAGACGATGGAAACAACGAGCTCTCAGTCGAGGAGATCCGCCGT
AGGAGGCTCGAAAGATTTGGAGGATGATGTAGTCTGCACCAACG------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CAACTTCCATAGGGAAGTAGCAGTGC
AATGTCCAAGTAGTCCGCACGGAGAATGGCA-GGCATCTGCCCGTTTTGTGCTAGATGGTTTAGTGTTCCTTGGTTCTAG
CATTAGT--------------TATATGTGGAATGCTTTACGTAATTGAAATTGGTCTTAATCACCAT-------------
TACTGTTGCTGATACAGT--------------------------------------------------------------
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--------------------TATGTTCTTTAGCTTGAATCTTTGACAACCAGAAAGCAGTTTCCCGGTGATGATTTAAAT
TGGTGTTTAGGTGG-TAGCTGCAGATTAGACACCTGTTGTGCTTTACACAGGTTTTATTTATATGCATTGCCTTGTGAGA
GGAGCACTGAATCACTTCTCACCCATCTGTCCGATATGTGAGACCTTTCCGTCTAGTGGAAAGATTCGATTCAGCCTGCC
TGCCAGACAATCTGTTTTCCATTATGAAGATCCAAGGATCGATCT-----------------------------------
------------------------------CACTTGCATAGCATCTCTCAGTGCCAATTTTGTCATCTGATTCGATTCGA
CAGAGAGGCACTTTGGTGGGAGTTACTAAAACTGGTGTACGACTGCATAATACTGCCTGGTAGTAGACATACAAGCAACA
CGGCGTGGATTCTGGCTATGGTTTCATGGTTTGGAACTCATGAAA----------TTGCACAATTTTGTACTACTACTAC
TACTACAAAGCTTCGAATTGGTACGTATATTACCCGGGGAAACTGGTA-------------------
>chr1A_412
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----------------AACGTAAGGTTCCCATTTCACC------------TTTCTTCCCACCACCCCTTTGTCCAACCTT
TCATGTATATGATAATCAATCACCTTAATTTACTTGCCTTCTGAACCAATTCCACTTTAATTTACTCACCAAACTTCTAA
TAAAAATATAAGGTAATTCACGGTCAAAATTTGATGAATATTTATTTACACAATCGCATTATTATTGGCAGGTAAATCAC
AAGCTAACGTACTAGAACATTTATATCCCGTTGCAATTCACGGGCATTGTTCTAGTAGAGCAAAACAGTGCACAAAACAA
AACCGCAAACTAGTAGTAGTGACACTCGACACTCCTCTCTCATATCCCACTGACAGAGTATGATAAAAGTCCTCAAACTC
TACATGTCTAGGCTCTCTTATTTCCCTGTCAGAAGGGATCAATCATATGTCACAAAAATCAGTAAGTCATATCTGACGGG
TTTTAGAGTATAAATTAAATTGAACCTCAGGAGGGTTATTCCTACTCAGAAAATGGAAATTTTGCACAAAGGAATTTGTG
AGGAGATGGTATTGTTCACACTCAGTTGCGATGAAGTCGGTAAGCCTATCATTAGCAGCAAATTGTGCGAACTCTTGACG
GATCCCGACTCCATCCATGAAGGGGTTATGCGGCCATTCGCACGGCCGCACCTTCGCCCTTCTCTAAGTATGGAGGTCAT
TGTCCGAGGATTCCCCAATGACTCCCTTATCGCTTTTATTGGAGGTAAACTTCCTAAAGAAACTCATCTTATTCCTATGA
ACAAAATTCTGAAAATTTTAGTCCACGAAATTTTTGTCAACAAAACTTCACAAGATTGATAGCAACTACTCATAAGGACG
CATAAAGGCTACATTGAGCATTAAAACTACTTAGAACTCTAAGAATTCAATATGCAAGCTCATCTACAACAGCACCAAGA
GTAGCTAAAGATTCAAAATATAATCCACTAAAGCAAAAACTAATTTGAGCAGTGGAGGAGTCACATACCCAGTAGCAATC
TCCCAAAACAGTTTCGGAAACGGAGCTTTGACCAAAGAGATCAAAATCCACGGGTTTGAGAGCAAGAACACGAGAGAGAG
CTATGGTGATTTTTTCTGGAGGTAGGAGAAGGAATGGGCTGAAGAGATAAGTGAGGGGGCCCACGTGGGCACCACAGCCC
CCAGGGCATGCCTGGGGCTGCTAGCACCCAGCTAGGTTGTGCTCACCTGGTGCACCCCCCTCTGATATTATTTGCATAAA
TAATTCAAAAATATTCAGAAAAAATCGTATTAATTTTTTAGTGCATTCTGAGAACTTTTATTTTTGGGTCATTTTTATTG
CATGGCAAATTCAAAAAACTCACAAAACATGGCATTTTATTTTATTTAACTAAGAAAAACACACAACAAAAGTTGGGACA
GAAGGTTGTGCCCACTAAATTCATCAACTTCATACTTCTCAAAAATGATCCATTAATAAGGTTGATCAAGTCATATTAAC
AACCACCTTCGATTGGCATGAAACCCAAAAACTTTCGTAAAATAAAAAGAACGTAAGGTTCCCATTTCACCTTTCTTCCC
ACCACCCCTTTGTCCAACCTTTCATGTATATGATAATCAATCACCTTAATTTACTTGCCTTCTGAACCAATTCCACTTTA
ATTTACTCACCAAACTTCTAATAAAAATATAAGGTAATTCACGGTCAAAATTTGATGAATATTTATTTACACAATTGCAT
TATTATTGGCAGGTAAATCACAAGCTAACGTACTAGAACATTTATATCCCATTGCAACTCACGGGCATTGTTCTAGTAGA
GCAAAACAGTGCACAA----------------------------------------------------------------
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-------------------------------------------------------------------AA-----------
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---------------------------------------------------------------------TAAAACTGCAA
ACTAGTAGTAGTGACACTCGACACTCCTCTCTC-----------------------------------------------
-----------------ATATCCCAGTGACAGTGTATGATAAAAGTCCTCAAACTCTACATGTCTAGGCTCTC-------
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-----------------------------------------------------------------------------TTA
TTTCCCTGTCAGAAGGGATCAATCATATGTCACAAAAATCAGTAAGTCGTATCTGACGGGTTTTAGAGTATAAATTAAAT
TGAACCTCAGGAGGGTTATTCCTACTCAGAAAATGGAAATTTTGCACAAAGGAATTTGTGAGGAGATGGTATTGTTCACA
CTCAGTTGCGATGAAGTCGGTAAGCCTATCATTAGCAGCAAATTGTGCGAACTCTTGACGGATCCCGACTCCATCCATGA
AGGGGTTATGC------------------------------------------------------GGCCATTCGCACGGC
CGCACCTCCGCCCTTCTCTAAGTATGGAGGTCATTGTCCGAGGATTCCCCAATGAGTCCCTTATCGCTTTTATTGGAGGT
AAACTTCCTAAAGAAACTCACCTTATTCCTATGAACAAAATTCTGAAAATTTTAGTCCATGAAATTTTTGTCAACAAAAC
TTCACAAGATTGATAGCAACTACTCATAAGGACGCATAAAGGCTACATTGAGCATTAAAACTACTTAGAACTCTAAGAAT
TCAATATGCAAGCTCATCTACAACAGCACCAAGAGTAGATAATTATTCAAAATATAATCCACTAAAGCAAAAACTAATTT
GAGCAGTGGAGGAGTCACATACCCAGTAGCAATCCCCCAAAACAGTTTCGAAAACGGAGCTTCGACCAAAGAGATCAAAA
TCCACGGGTTTGAGAGCAAGAACACGAGAGAGAGCTATGGTGATTTTTTCTT-----------------GAGGTAGGAGA
AGGAATGGGCTGAAGAGATAAGTGAGGGGGCCCACGTGGGCACCACAGCCCCCAGGGCATGCCTGGGGCTGCTAGCACCC
AGCTAGGTTGTGCTCACCTGGTGCACCCCCCTCTGATATTATTTGCATAAATAATTCAAAAATATTCAGAAAAAATCGTA
TTAATTTTTTAGTGCATTCTGAGAACTTTTATTTTTGGGTCATTTTTATTGCATGGCAAATTCAGAAAACTGACAAAACA
TGGCATTTTATTTTATTTAACTAAGAAAAACACACAACAAAAGTTGGGACAGAAGGTTGTGCCCAGTAAATTCATCAACT
TCATACTTCTCAAAAATGATCCATTAATAAGGTTGATCATGTCATATTAACAACCACCTTCGATTGGCATGAAACAGAAA
AACTTCCATAAAATAAAAAGAACGTAAGGTTCCCATTTCACCTTTCTTCCCACCACCCCTTTGTCCAACCTTTCATGTAT
ATGATAATCAATCACCTTAATTTAC-------------------------------------------------------
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-----------------------------------------------------------TTGCCTTCTGAACCAATTCCA
CTTTAATTTACTCACCAAACTTCTAATAAAAATATAAGGTAATTCACGGTCAAAATTTGATGAATATTT-----------
-------------------------------------------AC----------TTACACAATTGCATTATTATTGGCA
GGTAAATCACAAGCTAACATACTAGAATATTTATATCCCGTTGCAACTCACGGGCATTGTTCTAGTA
>chr3B_758
TTTTAATATA----------------------------------------------------------------------
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---------AAAAATTGATGGTTAGAATGTAATTGC-------GCGTCAATGTCCAGAGCGATGTTTTCTAGCGAAAGAA
TCTATTCTTCTACCATCGAAAAATAAGACGAAGCAGTATATAAGTATTTCTGAATCTGAAGAGAGAAAAGGCCTTCGCCA
AGTCATCAGT---------------AAAAAAAAGCCCTCGCCACAGGCCTGTACGTCTTCCGACCACACCGGTCCATCGA
TCTCGGCGATGGGGATCGGCATGAGCAGCGGCCGGCAGGACTTCGCCGGCCGGACGCTGCCGCTGTTGGCTGTGCAGATG
CTTCTACAGTACGGCCCGGCCGGCGCAAGCCGCCCGCCCCTGACGGCCGCACTGATCGCCGCCAATGCGCTGGTGTACTT
CCGGCCGGGCGCCATCGACGCGCACCTCCCCCGGCTCCGGCACGTCATGTTCAACCCCCACCTCATCATCAAGGTACCCA
CCTACACCACCACGCCTCAACCGGCTG-TTTTTTTAGGGCTAGTGGAAGGTGCTCCGCCTTTGCATTATAGATTAGGCAT
TTACAAGAGAAAAGTCTGAAGCCCTAAGGCAGACAGGGGAAAACAGCACATTTACATAGCTAAATGCCTCGAATAGGCCA
TATACAAGTATGTTAAGTCAGACCTGACTAAGCAACCGGCTGATTAGATGGCGGAATTATGTGCATGTTATCTTTTCTTT
TGCGATGGAATTATGTTTGGATTCAGTTGGCTACTGAACAAATTACATTGAGCACCCTTATCCAGGCGTACAGGGTTGCG
GAGTTCAGCACCACATTATGTTGTGCCGATATTTTTGTCTCCGGTTGCCGCATTGTCGGGTTTAGCTAATACTCCCTCCG
TTCCTAAAAATAAGTCTTTGTAGAGATTTCACTATGGATTATATACGGAGCAAAATGAGTGAATCTACACTCTAAAATGC
ATCTATATACATCCGTATGTGGTCCATACTGAAATCTCTACAAAGACTTATATTTAGGAACGGAGGGAGTAAAACTTATG
CTTTTGAT--------CTTGCAATTGGGCCAAATTTATAAGATGATTACTGAGCAATGCTGCATAGGAGCAGGATTCCGA
CCCTAATTATAATTGGGATTCCCTATTGGTAGTATTTGGCAACAATACTCTATTAGAGTTGGTTAATTTTTCTCTTATTT
AGTTAAACATAAATCTGTTGAAGCACAGATTGACCCTATGTTTGTATGCAAGCTTAGGGACTCACTTGTCCAGTTGTCTA
GATCGTGGATCTAAATGACATTTTCGCACACACA-AAAAGGGATCTAAATGACATGATGCGCAAGTTTTGCACCCCATGC
CCATGGCTCACTTTACACGCATAGAATCGGTAAAATGCACGCTACACCGTTCACAATGTTGTGCTTCTCCTGTTGCATTG
TTTCCCTACCAGCAGGGTGCAGATGATGTGCTTTGAATGTCGTACTGCAAGTAATTGCAAGTTGTTCTTTTCAGACTTTT
CTAAGCATCCTTTCCAGAGTTTTATATATCCACCACTCTCAAAAA---TAACAGTTATGAACATTGTTGCAGTTCGGCGA
CCTGAGACGTTTCTTCCTCTCAGCTTTCTACCACTTGAGTGAAGGTCACTTCTTCATGAACATGGCTTCTCTCTTGCGCA
CGGGGGCAAAGCTTGAAACATCAATGGGCAGTCCTGAGTTTGCTTGCATGGTGGTTTCCTTGCTTGGCCTTTCTCAGGGC
TTCACATTGCTCTTGTCTAAAGGTTTGCTTTCGCTCGGCAACGACAT---------------------------------
-------------------------TGCGTATTATCAGTATTCTGCTGGATTTAGTGGAGTGCTGCTTGGCATGAATGTT
GTGCTGAATGCCCGAGAAGGCGATGTTGTCTGGCATGGGGTGACCGTTCCTGCAAAGTATGCGGCATTGCTTGAACTACT
ATTCATCCATGCTTTCAATCCGGAGGCACACTTGATTTGCAATGTTGGTGGGATACTTGCTGGCCTGGCCTACCTTTTGC
TGAGGCACGGTCCAGAACGGCTCGCTCCTATGTTTTCAGACATTGCATACGCTGTGAGTCAGCCGGCGAGATTTGCTAAG
AAACTTCTGAGGTCAGCAGCACATGGTCGGGGGAGCAGTGTCCGGCACCATGTTGCACCGGCGCAAGAAGAGGTTGGGCA
AGGTATGCGGTGGAGATGCATAACATGTTCTTGTGACAACTCGCGTCACGCAGATGTCTGCGAGATGTGCAGCACTCCGC
ACCCGGACCATGCCTTTTCCCGCAGACGGCATCTCCAAGACGGTGGAAACAACGAGCTCTCAGTCGAGGAGATCTGCCAT
AGGAGGCTCGAAAGATTTGGAGGATGATGTAGTCTGCACCAACG------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CAATGTCCATAGGGAAGTAGCAGTGC
AATGTCCAAGTAGCCCGCCCGGAGA-----ATGGCATCTGCCCGTTTTGTGCTAGATAGTTTAGTGATTCTTCGTTCTAG
CATTAGTATTAGT--------TATATGTGGAATGCTTTACGTAATCGAAATTGGTCTTAATCACCGTTTGACGGCCCGAG
TACTGGTACTGATATAGT--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------TATGTTCTTTAGCTTGAATCTTTGACGACCAGAAAGCAGTTTCCTGGTGATGATTTAAAT
TGGTGTTTAGGTGGATAGCTGCAGATTAGACACCTGTTGTGCTTTACACAGGTTTTGTTTATATGCATTGCCT-GTGAGA
GGAGCACTGAATCACTTCTCACCTATCTGTCCGATGTGTGAGACCTTTCCGTCTAGTGGAAAGATTCGATTCAGCCTGCC
TGCCAGACAATCTGTTTTCCATCATGCAGATATAGGGATCGATCTCTCGTCCCATCATCAGAAAAGCAAATCAACGGGAA
TTCTAATTTTTGCGTGTGCTTGCCTGAAAGCACTTGCATAGCATCTCTCAGTGCCAATTCTGTCATCTGATTCGATTCGA
CAGAGAGGCACTTTGATGGGAGTTACTAAAACTGGTGTACGACTGTATAAGACTGCCTGG---TAGACATACAAGCGACA
CGACATGGATTCCGGCTATGGTTTCATGGTTTGGAACTCATGAAC----------TTGCACAATTTTGTACTACTG----
--CTACAAAGCTTCGAGTTGGTACGTATATTACCCGGGGAAACTCGTA-------------------
>SNPs
-------------------------------------SSSSSSS----S----------------------------SS-
SSSSSSS------------------------SS-----S-------S------------------------------S--
--S--S-------------------------------------S--------SS--S-----------SS-----S--S-
---------SS--------------------------------S-----S--S-----SSS-S--S-S-S-S--------
----------S------S----------------SSSSSSSSSSSS-----S------------S---------S-----
----------S----S----------------------------------------------------------------
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------S--------------------------------------------------------S--------S-------
-----------------S----------------S----------S-----------------------S----------
-----------S-----------------S--------------------S------S----------------------
S---------------------------------SSS--------S----------------------------------
SS-------------------------------------------------------S----------------------
------------------------------------------------S-------------------S-----------
-------------------SSS----------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S------------------------------S-------------------
---------------------------------------------------------------------S----------
---------------------------------------------------------------S---S------------
--------------------------------------------------------------------------------
---------------------------S-------------S------------------------------------S-
-S--S---SSSSS-----S-SSSS-SS-SS-SSSS-SSS-S-----------------------------S--------S
SS---S------------S-S-S-S-SS--S-S-SSSSS----------------S--S---------------------
----------S---------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S----------S--
-------------------------------------S------------------------------------------
------------------------SS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-------------------S---
---S---------------------S-----------------------------------------------------S
---------SSS-SSS---SS------------------S----------------------------S-----------
----------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS----------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------SSSSSSSSSS------------------S------
------------------------------------------------S------------------
>forward_39
-------------------CGTGGATCCACCGAAGACAA-----------------------------------------
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>reverse_3371
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----------ACCTAGCTTGCAATTGGGCC--------------------------------------------------
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-------------------------------------------------------------------
>forward_284
--------------------------------------------------------------------------------
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------------------------CCATGGCCCTAAGACCACAG------------------------------------
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>reverse_3907
--------------------------------------------------------------------------------
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------------------------------------------------------------------GTGCAGTTCGGTGA
CCTGAG--------------------------------------------------------------------------
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-------------------------------------------------------------------
>forward_338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GC
ACGAGAAACCCTAGCCAA--------------------------------------------------------------
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>reverse_3918
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-----------------------------------------------------------------------------TGA
CCTGAGACGTTTCTTCCTC-------------------------------------------------------------
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>forward_3733
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---------------------------------AATGCACGCTACACCATTCG---------------------------
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>reverse_5335
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------------------------------------------------------TGAAGCACGGGGATAGAGGA------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------
