>input_sequence_38545
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--------------------------------------------------------------------ATGGACACGGTG
GGCGCCCGGCTGAGCCGCTCCTCCACGCGCTATGGCCCCGTCGGCAGCAGCAACGCCTCCTTCAGTGGGCCCGTCAGGAA
GTGGCGCAAGGCGTGGGCCCCTCTCGCCGGCGGCGGCGCGGGGTCCGCCTCCGCCGGTATGGGTCCCATTGGGTGCCCAA
GGGGTAACAAGGTGGTGCTGCTCAAGTGGGCACCGGTGAGCGGTGCCGGCGACGGTAACGGCAAGGAGGTCGCCGCGGCG
GCCACCAGACGGCGATACGTTCCGGTGAGGCTTCTTGGCTTCAAAGATTAGGTCTTG-CGATTGTTCAGTTGCTTTATTG
CGCTCTGGTGGGTTCGATCTGCTTCGGAGGTCGGACATTTGGCCGTTCTTGCCTTCTTGGCTTCTCCCGGGTCATAGTTT
TAGGCACAATGTAGGAGGGGATAGGAGACCACACGGGTTCTTCTTGGATGATTTTGGCGCTAGCGTCAGCAACTAGGGTC
TGGACGCCGGAAATGTAGGATTTGGGGGTTGGCCTTCTACTTCAGCTTGGGTTGTGCTAGGGTTTTGTAGCGTAATCAGT
GTATGGTGGGAATTTCAGACTCAGTTGATGAGGGTAGTAGGCTATTTCCGGGCAAAAATGGGCAATAGCAGGCCTTGCAA
TTCTTCAGTACAACTCGTTCAAGGCGAGCGTGCTGGTTCAACAATTGTGGAGATTTCTGAGTGATTGTTTGGGCGGTTGT
GCCTCTGCTTCTGCCTCAAGGCTCAAGATTTAGCCTTGTGGTTAGAATTTGACTATTGGTGACACTCCTAAATTAGTCAA
TTTAGTGGTTGCACTGATGGTTAAAAACCGAATATGGGGTCATTGATTGATTACCTAGTGTTCTT-----TATTGTCATT
CGTCACCTGTATTCAGATATGCTTTTGAAATAAAGTCCATCTGAATCCTGAACTATTGTGCTTGGTCTGATTTGAGCCCT
AAAGGGTTAAACTATGATACCGTACCATCTATATTAAACCCTGAACTTTCAAAAACCATCTATTTTAAACTCTGAATTTC
TTAACATTTCCTACTTCTACAAAAGAAGAACAATTTCTGTGAAGACCCTGAAATGCACAACCATTATCCAAAACCGAGGT
AGGTTTCAAGTGAATGGTTTTAGAAAGTTCAGGGTTTAATATGGACAGTTTCATAATTCAGGGTTTAACACCA-AGTCTA
GGGTTTAAAATGGACTTGTATGTTTACAATTGTTGTGTACATATATGATAGCCTCTTGT-----GGATGCAACTATTTCT
TGCATAGGTCTTGGTGCTCTTTTACTTTGTTCCTACAGTCGACAGTGATGTTGAGCTTCAGGTTTGCTTTACAGAGAGAC
TTAGAACTGGTGGATGCAATCAATTTGTGTAGAAGTATGTGTGCACCGAAAATATTGCCAGTAGTGACTGTCTATTTGAA
TCTAGTTACGGCACTTCTAACAATGTAACTTCCAGTTCGAGGATAAGGCTAATGATACAGATTCGTCATCTGATGGTAAA
CAAATGGTATAAGGAAATTTCACCCGACAGAGCCAAAATAATGGAGAAGTTCA---------------------------
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-------------------------------------------------------------------GTTTCATGTA---
-TTTTGGATTTGCTGGGCTTTCATTTGGGAAATGGATATAGCTGAATAAACAGAATTGATACATCAAGTACAAGTAGTAG
TTTTTCAATCATTTTATTTGTAAAGTTCAGCGATATGTTTGCGTTCATTTGTTGCATCTATTGTGCTAAGCTCATTTTCC
CTTGTGCCAAGTAACTGGGAAAGGACCCCATTAATTTTTTTATAC------------------------TCCTGGTTGTC
AGTACAACATTTTCCTTGCCAGAGAGATAACACAGCATTCTGCATATCACAGTGATAAAACTTATACGTGTCTCTGTACC
CTCTTTCAGGTTTCGGGTGTGCCACAGAACCCTACCAGAAAAGGCGGCAGCACCGAGCTGAACTTGAACCTTGGTTTGGA
GGACCCGGATGATGACAGCGACGCTGATTTGAGCCCAGACGAACAGCGTGACATGGGCAGCACCCCGCGTTCGGAGAACC
GACTGAAGAGGAAAGTGTTTTAA---------------------------------------------------------
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-------------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G180200
CCATGGTAGCTGGAGGATAATTTATTTGCAACAAGGGTGTTGTTGGTTTTTTGTTTTTGCAAC------GGTGTTGCTAA
AGACAGACGGTGCACAATGACGATAGCTTAGACAAGCTTTTGCAAAATCATCTATATTACAAAAAAAT---CTGCAATAA
GACCTATGTTATAT------------------------------------------------------------------
------------------AAAAAAAATCTACAACAAGATTTGTGTTTTTTTAGGATAACAAGATTTGTGTTGTCATGATG
AAGACGTGCTCGCCCGCTTGATGTGTCAGATTTTCCTA-----------GTCGATCTTTTTAAAAAGACCAGCCGGCGAA
TTCGTAGCACGCTGGTTTGTTAAAACAACAAATCATAAGATGCCCTAAACTAGCATTGTCTATACCCCTATATAGTGTGC
GAATAATTTTGAAAGCTGGTCGTTGGATAAAGCCAATCCAACGGTACAGAGATGGCAAATTCGAGCACTACTGGCCGTTG
GATATCATCTACATTCCACTAGATTCTGCCACATGTACAATCTAGAAGACTCCATGGTTGAACTTAAGCATAATGCACGA
ACCTAAAAAACAAGCACTTCTCCTTTGTTCTCTAGAATCTTCCATATATTAATTTCTCAAACTTTTTTTAAATGAATTTT
CACTTTTTGTTTTTACTTTATGCTTTACAATGCACAATTCCATGAATCTTAAAATAGATTATTTTTATAAAACTAATTGA
TTTTGGATGAGATGAACTATAAGAATTAAACGAACATCTACATTATGCATATATGACTTAAAGCTTACATGCTATAGTGT
GGTATTTTTTCATAATTTGGTTACCAAATCTCGTGCGTGCGATCCACGTGTACACTCCTTAGAAGAGAGGGAGAAGAAAC
AAAATACTAGCCTCTGCAAACTTCGAGAGTTCGCATCGTCCACAAAGGTGGAAGGAACACCG----AAGCCCTCCCCTGC
ACCCTACTCCCTACCCACCTCGCCGGAGGAGAACCGAAGCCGCCGCTGCCGCCGCCCGCCCCCGTGAAATGGACACGGTG
GGCGCCCGGCTGAGCCGCTCCTCCACGCGCTATGGCCCCGTCGGCAGCAGCAACGCCTCCTTCAGTGGGCCCGTCAGGAA
GTGGCGCAAGGCGTGGGCCCCTCTCGCCGGCGGCGGCGCGGGGTCCGCCTCCGCCGGTATGGGTCCCATTGGGTGCCCAA
GGGGTAACAAGGTGGTGCTGCTCAAGTGGGCACCGGTGAGCGGTGCCGGCGACGGTAACGGCAAGGAGGTCGCCGCGGCG
GCCACCAGACGGCGATACGTTCCGGTGAGGCTTCTTGGCTTCAAAGATTAGGTCTTG-CGATTGTTCAGTTGCTTTATTG
CGCTCTGGTGGGTTCGATCTGCTTCGGAGGTCGGACATTTGGCCGTTCTTGCCTTCTTGGCTTCTCCCGGGTCATAGTTT
TAGGCACAATGTAGGAGGGGATAGGAGACCACACGGGTTCTTCTTGGATGATTTTGGCGCTAGCGTCAGCAACTAGGGTC
TGGACGCCGGAAATGTAGGATTTGGGGGTTGGCCTTCTACTTCAGCTTGGGTTGTGCTAGGGTTTTGTAGCGTAATCAGT
GTATGGTGGGAATTTCAGACTCAGTTGATGAGGGTAGTAGGCTATTTCCGGGCAAAAATGGGCAATAGCAGGCCTTGCAA
TTCTTCAGTACAACTCGTTCAAGGCGAGCGTGCTGGTTCAACAATTGTGGAGATTTCTGAGTGATTGTTTGGGCGGTTGT
GCCTCTGCTTCTGCCTCAAGGCTCAAGATTTAGCCTTGTGGTTAGAATTTGACTATTGGTGACACTCCTAAATTAGTCAA
TTTAGTGGTTGCACTGATGGTTAAAAACCGAATATGGGGTCATTGATTGATTACCTAGTGTTCTT-----TATTGTCATT
CGTCACCTGTATTCAGATATGCTTTTGAAATAAAGTCCATCTGAATCCTGAACTATTGTGCTTGGTCTGATTTGAGCCCT
AAAGGGTTAAACTATGATACCGTACCATCTATATTAAACCCTGAACTTTCAAAAACCATCTATTTTAAACTCTGAATTTC
TTAACATTTCCTACTTCTACAAAAGAAGAACAATTTCTGTGAAGACCCTGAAATGCACAACCATTATCCAAAACCGAGGT
AGGTTTCAAGTGAATGGTTTTAGAAAGTTCAGGGTTTAATATGGACAGTTTCATAATTCAGGGTTTAACACCA-AGTCTA
GGGTTTAAAATGGACTTGTATGTTTACAATTGTTGTGTACATATATGATAGCCTCTTGT-----GGATGCAACTATTTCT
TGCATAGGTCTTGGTGCTCTTTTACTTTGTTCCTACAGTCGACAGTGATGTTGAGCTTCAGGTTTGCTTTACAGAGAGAC
TTAGAACTGGTGGATGCAATCAATTTGTGTAGAAGTATGTGTGCACCGAAAATATTGCCAGTAGTGACTGTCTATTTGAA
TCTAGTTACGGCACTTCTAACAATGTAACTTCCAGTTCGAGGATAAGGCTAATGATACAGATTCGTCATCTGATGGTAAA
CAAATGGTATAAGGAAATTTCACCCGACAGAGCCAAAATAATGGAGAAGTTCA---------------------------
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-------------------------------------------------------------------GTTTCATGTA---
-TTTTGGATTTGCTGGGCTTTCATTTGGGAAATGGATATAGCTGAATAAACAGAATTGATACATCAAGTACAAGTAGTAG
TTTTTCAATCATTTTATTTGTAAAGTTCAGCGATATGTTTGCGTTCATTTGTTGCATCTATTGTGCTAAGCTCATTTTCC
CTTGTGCCAAGTAACTGGGAAAGGACCCCATTAATTTTTTTATAC------------------------TCCTGGTTGTC
AGTACAACATTTTCCTTGCCAGAGAGATAACACAGCATTCTGCATATCACAGTGATAAAACTTATACGTGTCTCTGTACC
CTCTTTCAGGTTTCGGGTGTGCCACAGAACCCTACCAGAAAAGGCGGCAGCACCGAGCTGAACTTGAACCTTGGTTTGGA
GGACCCGGATGATGACAGCGACGCTGATTTGAGCCCAGACGAACAGCGTGACATGGGCAGCACCCCGCGTTCGGAGAACC
GACTGAAGAGGAAAGTGTTTTAACCGTCGACCTTATACTAGTAGAACCTA---AGCAGCAGCAGCTCCATGTTCCACATG
AGTTATGCACCATCTTTGCGATGCGAGGTCCCTGGAGTAGCCTTATAATTATTAGTATGTAGCTTGTATCTGCTGTGCTT
CCGTGTTTCAGTAGATGAATTGATGTTGTTTCATGCCAATTGGGAGGCTTATTGCCTTGTTATTGTTGTATTAATGTCAT
GAACTTGTGAGGAAACTGGTAGTGTACTGTGTACCAGCACGTTGTTCTATGGAATCCTTTTCAGTCGTGAGAGGTGATCG
GCGCCCTCAATGTCCATCGTTCGTGGATGCTAGAACACGGAACGGGACCCACAGTTTCCTTTTTTCCTTTCTCTTTTATT
GAGAGCAACCTACATTTCTTTTGAAAGCAACAGATTTTATTCCTCAGATAATAGACCATATTGTTTACAGTATAGTGAGA
AATAAAAT-----CAGGGATTA-----TCCCAAAACATAGAAGATTTTTCACTAAATGTGTTCTTCGCTAGGTTGTGAGC
CACTTCATTTGCTTCATGGCGACAC--TGTATATGGGGCACTCACAAAGTCCAGCCCTAAATGTTTGCATTCAAGTACCG
TTGCAACATCTGAGCCCACATACGTTTCTGGTTGTTGCACTGCTTCCACCACAAAGCTACAATGTGACTCAATGATCACT
TTATTACATCTGATCCTCCATGCTAGATATAAACCATTCCGGATCGCTGAGCCCACATACGTTTCTGGTTGCTGCGCTGC
TTCCACCACAAAACTACAATCCGACTCAATGATCATTTTGTTACATCCGATCCTCCCTGCTAGATATAATCCATCCCGGA
TCATTGTCATCTCTGCTGAGTCAA-CGCTGGTCACATGAGGAACGAATCATGTTGCCTCAACAATGAAGTTCCCTCTTCC
ATCACGGGCAATAGAGCCTGTTGTACCCGAGAGTTTCAACTCGGAAAGCAACATCAACATTGATTTTGACCACATCCCT
>chr5A_1
CCATGGCAGCCGAAGGATAATTTATTTGCAACAAGGGTGTTGTTGGTTTTTTGTTTTTGCAACAACAGCGGTGTTGCTAA
CGG----CGGTGCACAATGACGATAGCTTAGACAAGCTTTTACAAAATCATCTATGTTGCAAAAAAATAATCTACAATAA
GACCTACTCCCTATGTCCCATAATATAATAACGTTTCTGACACTAGTGTAGTATCAAAAACGTTCTTATATTATGAGACG
GAGGGAGTATGTTGCAAGAAAGAAAATTTACAACAAGATTTGTGTTGTA-------------------------ATGATG
AAGACGTGCTCGGCCGCTTGATGTGTCAGATTTGACTGCTCGCGGCCTGGTCGATCTATTTAAAAAGACCACCCGGCGAA
TTCGTAGGACGCTCGTTT-TTAAAAGAACAAATCATAAGATGCCCTAAACTAGCGTTGTAGT------------------
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-----------------------------------------------------ACTCCGTAGAACAGAGGGAG--GAAAC
AAAATACTAGCCTCTCCAAAGTCCA-----------CATCCACAAAGGTGGAAGGAACACAGCACCAAGCCCTCCCCTGC
ACCCCACTCCCTACCCACCTCGCCGGAGGAGAACCGAAGCCGCCGCTGCCGCCGCCCGCCCCCGTGAAATGGACACCGTG
GGCGCCCGGCTGAGCCGCTCCTCCACGCGCTATGGCCCCGTCGGCAGCAGCAACGCCTCCTTCAGTGGCCCCGTCAGGAA
GTGGCGCAAGGCGTGGGCCCCTCTCGCCGGCGGCGGCGCGGGGTCCGCCTCCGCCGGTATGGGTCCCATTGGGTGCCCGA
GGGGTAACAAGGTGGTGCTGCTCAAGTGGGCGCCGGTGAGCGGTGCCGGCGACGGTAACAACAAGGAGGTCGCCGCGGCG
GCCACCAGACGGCGATACGTTCCGGTGAGGTTTCTTGGCTTCAAAGATTAGGTCTTGGCGATTGTTCGGTTGCTTTATTG
CGCTCTGGTGGGTTCGATCTGCTTCGGAGGTCGGACATTTGGCCGTTCTTGCCTTCTTGGCTTCTCCCCGGTCATAGTTT
TAGGCACAATGTAGGAGGGGATAGGAGACCACACGGGTTCTTCTTGGATGATTTTGGCGCTAGCGTCAGCAACTATGGTC
TGGACGCCGGAAATGTAGGATTTGGGGGTTGGCCTTCTACTTCAGCTTGAGTTGGGCTACGGGTTTT-----------GT
GTATGGTGGGAATTTCAGACACAGTTGATGAGGGTAGTAGGCTATTTCCGGGCAAAACAGGGCAATAGCAGGCCTTGCAA
TTCTTCAGTACAACTCGTTCAAGGCGAGCGTGCTGGTTCAACAATTGTGGAGATTTCTGAGTGATTGTTTGGGCGGTTGT
GCCTCTGCTTCTGCCTCAAGGCTCAAGATTTAGCCTTGTGGTTAGAATTTGAGTATTGGTGACACTCCTAAATTAGTCAA
TTTAGTGGTTGCACTGATGGTTAAACACCGAATATGGGGTCATTGATTGATTACCTAGTGTTCTTATTTTTATTGTCATT
CGTCACCTGTATTCAGATATGCTTTTGAAAGAAAGTCCATCTGAATCCTGAACTATTGTGCTTGGTTTGATTTGGGCCCT
AAAGGGTTAAACTATGATACCGTACCATCTATATTAAACCCTGAACTTTCAAAAACTATCTATTTTAAACTCTGAATTTC
TTAACATTTCCTACTTCTACAAAAAAAGAACAATTTTCGTGAAGACCCTGTAATGCACAACCACTATCCAAAACCGAGGC
AGGTTTCAAGTCAATGGTTTTAGAAAGTTCAGGGTTTAATATGGACAGTTTCATAATTCAGGGTTTAACACCATAGTCTA
GGGTTTAAAATGGACTTGTATGTTTACAATTGTTGTGTACATATATGATAGCCTCTTGTCTTGTGGATGCAACTATTTCT
TGC-TAGGTCTTGGTGCTCTTTTACTTTGTTCCTACAGTCGGCAGTGATGTTGAGCTTCAGGTTTGCTTTACAGAGAGAC
TTAGAACTGGTGGATGCAATCAATTTGTGTAGAAGTATGTGTGCACTGAAAATATTGCCACTAGTGACTGTCTATTTGAA
TTTAGTTACGGCACTTCTAACAATGTAACTTCCAGTTCGAGGATAGGGCTAATGATACAGATTTGTCATCTGATGGTAAA
CAAATGGTATAAGGAAATTTCACCCGACAGAGCCAAAATAATGGACAAGTTCA---------------------------
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-------------------------------------------------------------------GTTTCATGTACGT
ATTTTGGATTTGCTGGGCTTTCATTTGGGAAATGGATATAGCTGAATAAACAGAATTGATACATCAAGTACAAGTAGTAG
TTTTTCAATCATTTTATTTGTAAAGTTCAGCGATATGTTTGTGTTCATTTGTTACATATATTGTGCTAAGCTCATTTTCC
CTTGTGCCAAGTAACTGGGAAAGGACCCCATTAAATTTTTTTGTACTCGCCCAACATCAGTTTCTATTTTCCTGGTTGTC
AGTACAACATTTTCTTTGCCAGAGAGATAGCACAGCATTCTGCATACCACAGTGATAAAACTTATACGTGTATCTGTACC
CTCTTTCAGGTTTCGGGTGTGCCACAGAACTCTACCAGAAAAGGCGGCAGCACCGAGCTGAACTTGAACCTCGGTTTGGA
GGACCCGGATGATGACAGCGACGCTGATTTGAGCCCAGACGAACAGCGTGACATGGGCAGCACCCCGCATTCGGAGAACC
GACTGAAGAGGAAAGTGTTTTAACCGTCAACCTCGGA-TACTAGAACCTAAGCAGCAGCAGCAGCTCCATGTTCCACATG
AGTTCTGCACCATCTTTGCCATGCGAGGTCCCTGGAGTAGCCTTATTATTATTAGTGTGTAGCTTGTATCTGCTGTGCTC
CCGTGTTTCAGTAGATGAATTGATGTTGTTTCATGCCAATTGGGAGGCTTATCGCCTTGTTATTGTTGTATTAATGTCAT
GAACTTGTGAGGAAACTGGTAGCGTACTGTGTACCAGCACGTTGGTCTATGGAATCCTTTTCAGTCGTGAGAGGTGATCG
GCGCCCTCAATGGCCATCGTTCGTGGATGCTAGAACACGGAACGGGACCCACAGTTTCC-TTTTTCCTTTCTCTTTTATT
GAGGGCAACCTACTTTT-TTTTGAAAGCAACAGATTTTATTCCTCAGATAATAGAC-ATATCATTTATAGTATAGTGAGA
AATAAAAT-----CAGGGATTATAGATTCCCAAAACATAGAAGATTTTTCACTAAAT--GTTCTTCGCTAGGTTGTGAGC
CACTTCATTTGCGTCATGGCGACAC--TGTATATGAGACACTCACTAAGTCCAGCCCTAAATGTTTACATTCAAGTACCA
TTGCAACATCTGAGCCCACATATGTTTCTAGTTGCTGCACTGCTTCCACCACAAAGCTACAATGTGATTCAATGATCACT
TTGTTACATCTGATCCTCCATGCTAGATATAATCCATTCCGGATCGCTGAGCCCACATACATTTCTGGTTGTTGGGCTGC
TTC-----CAAAACTACAATCCGACTCAATGATCATTTTGTTACATCCGATCCTCCCTGCTAGATATAATCCATTCCGGA
TCGCTGTCATCTCTGCTGAGTCAA-CGCTGGTCACCTGAGGAACGAATCATATTGTCTCAACAATGAAGTTCCCTCTTCC
ATCATGGGCAATAGAGCCTGTTGTACCCGAGAGTTTCAACTCGGAAAGCAGCATCAACATTGATTTTGACTACATCCCT
>chr5B_824
GTGTAC--------------------------------------------------------------------------
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-----------------------------------------------------ATTCCGTAGAACAAAAGGAGAAGAAAC
AAAATACTCCG-------AACTTCGAGAGTTCGCATCATCCACAAAGGTGGAAGGAACACAGCACCAAGCCCTCCCCTGC
ACCCTACTCCCTACCCACCTAGCCGGAGGAGAACCGAAGTCGCCGCTGCCGCCGCTCGCCCCAGTAAAATGGACACCGTG
GGTGCCCGGCTGAGCCGCTCCTCCACGCGATATGGCCCCGTCGGCAGCAGCAACGCCTCCTTCAGCGGGCCCGTCAGGAA
GTGGCGCAAGGCGTGGGTCCCTCTCGCCGGCGGCGGCGCGGGGTCCGCCTCCGCCGGTATGGGCCCCATTGGGTGCCCCA
GGGGTAACAAGGTGGTGCTGCTCAAGTGGGCGCCGGTGAGTGGCGCCGGCGACGGTAACGGCAAGGAGGTCGCCTCGGCG
GTCACCAGACGGCGATACGTTCCGGTGAGGCTTCTTGGCTTCAAAGATTAGGTCTTGGCGATTGTTCGGTTGCTTTATTG
CGCTCTGGTAGGTTCGATCTGCTTCGGAGGTCGGACATTTGGCCGTTCTTGCCTTCTTGGCTTCTCCCAGGTCATAGTTT
TAGGCACAATGTAGGAGGGGATAGGAGACCATACGGGCTCTTCTTGGATGATTTTGGCACTAGCGTCAGCAA-TAGGGTC
TGGATGCCGGAAATGTAGGATTTGGGG-TTGGCCTTCTACTTCAGCTTGGGTTGTGCTAGGGTTTTGTAGCGTAATCAGT
GCATGGTGGGAATTTCAGACTCAGTTGATGAGGGTAGTAGGCTATGTCCAGGCAAAAAAGGACAATAGCAGGCCTTGCAA
TTCTTCAGTAGAACTCGTTCAAGGAGAGCGTCCTGGTTCAACAATTGTGGAGATTTCTGAGTGATTGTTTGGGCGGTTGT
GCCTCTGCTTCTGCCTCAAGGCTCAAGATTTAGCCTTGTGGTTAGGATTTGAGTATTGGTGACACTCCTAAATTAGTCAA
TTTAGTGGTTGCACTGATGGTTAAACACCGAATATGGGGTCATTGATTGATTACCTAGTGTTCTTATTTTTATTGTCATT
TTTCACATGTATTCAGATATGCTTTTGAAAGAAAGTCCATCTGAATCCTGAACTATTGTGCTTGGTTTGATTTGAGTCCT
AAAGGGTTAAACTATGATACCGTACCATCTATATTAAACCCTGAACTTTCAAAAACTATCTATTTTAAACTCTGAATTTC
TTAACATTTCCTACTTCTACAAAAAAAGAACAGTTTTTGTGAAGACCCTGAAATGCACAACCACTATCCAAAACCGAGGT
AGGTTTCAAGTGAATGGTTTTAGAAAGTTCAGGGTTTAATATGGACAATTTCATAATTCAGGGTTTAACACCATAGTCTA
GGGTTTAAAATGGACTTGTATGTTTACAATTGTTGTGTACATATATGATAGGCTCTTGT-----GGATGCAACTATTTCT
TTCATAGGTCTTGGTGCTCTTTTACTTTGTTCCTACAGTCGACAGTG-TGTTGAGCTTCAGGTTTGCTTTACAGAGAGAC
TTAGAACTGGTGGATGCAATCAATTTGTGTAGAAGTATGTGTGCACTGAAAATATTGCCAGTAGTGACTGTCTATTTGAA
TTTAGTTACGGCACTTCTAACAATGTAACTTCCAGTTCGAGGATAAGGCTAATGATAAAGATTCGTCATCTGATGGTAAA
CAAATGGTATAAGGAAA-TTCACCCGACAGAGCCAAAATAATGGACAAGTTCAAGCCGCCCCCCGCGTGGGCGACCGGGA
GGCCCCAGATCCCATCGCCGCCGAACCTCCCCCACTCCTCCTCCTCCCTCGCCGCCGCCCAAGGGCGCGGCCAGGCGAAG
CCTAGCTGTCGCCGGCGGCGGCGGGGACTCGGGCCCTCTCGCTCGGGTGGGGCTGGCGCGGGCCGGCGCCGCCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
GGCCGGTCGCCACGGCGGGTGGTGGCGGCGCCTCGGCGACGTCGATTCCCCACGGCAGGAGGCCTTGCGATCTGGTGCGT
TGCGGCCGCCAGGGACGGCGGCGGCGTGACCGGATCGGTTCGCGGCGGCGCGGCCGGATTGATCGCTGGTTGGCCGGCGG
CACGGTGGTGGGTGCGACTCGTCGGCAGCTGGGCAGATCCGCGGGATTCTACCCTTGTCTGGCCCTTGACAGCGCGGGCA
ACTACGGGGGAAACCCTAGATCTCCTTTGGATCGAGCGATGGCGGCGCTTTTGCGTTGTAATCCCTCTTTAGGGCATTGT
TTTGGAGTTTGCTCCGGTTGAAGGGACCAGCGACGTCGGCGGCGCACGTCTGGTGGAGCAACTGCCGATGAAAATCGCGC
CGACTACGGTCATGGCGGACGATGGCGGCGTCTTAGATGTCGTTCCCTTGTCGAGGCATCGTCGTTGCAGTTTGCATCAT
CAGGCTCGGGATGCTCCGAGGGAAACCCTACATCTGGGTCTTCCGGATCGGACGATGATGGCGTTTTATCGCTTTCCCTC
CTGGGGGCATCGTTTTGGAGTAAGTGATGGCTGGGGGGATGGTGGAGCGGTGCTTCATCTCACACATCGATGGCGGCGGA
TATCGGCGGCATGGCGCTGTGGAGGCTCGGCGTCCGATGCACGGAGATGGACTCGCGCAGGAGGAGGTTGCTGTCTGGCG
TCATGGTGACGTCGATGGCAGAGTGGCCAGACAAGGTAGAAGCCTCAATATGATCTGAAGACGGACCTGTGGAAGATGGC
GGCGACGACACACGAGTGCGTCTGACCGGATTGTGCCCCAGACCCGATATGTGGCTCGGCTGGGGCTTCCGAATATGTTT
CGGCTTCCGGCTTTTGATGTTAGGCTTAGGTGAGTGGTTTGGGTAGTGGCCCAGCTAGCATCCCTTCATCATTTTGGATA
GGAGTAGCGGCATGTGTTGCCAAGATGGTGGATTCAGGCACATTGTTGTAATACTTTGTAAGGTCCTCGAGAATAATCAA
TAAAGTGGCCGTATGCATCTCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAAAAAGTTTCATGTACGT
ATTTTGGGTTTGCTGGGCTTTCATTTGGAAAATGGATATAGCTGAATAAACAGAATTGATACATCAAGTACAAGTAGTAG
TTTTTCAATCATTTTATTTGTAAAGTTCAGCGATATGTTTGCGTTCATTTGTTACATCTATTGTGCTAAGCTCATTTTCC
CTTGTGCCAAGTAACTGGGAAAGGACCCCATTAAAA-TTTTTGTACTCGCCCAACATCAGTTTCTGTTTTCCTGGTTGTC
ACTACAGGT---------------------------------------------------CTTATACGTGTCTCTGTACC
CTCTTTCAGGTTTCGGGTGTGCCACAGAACCCTACCAGAAAAGGCGGCAGCACCGAGCTGAACTTGAACCTCGGTTTGGA
GGACCCGGATGATGACAGCGACGCTGATTTGAGCCCAGACGAACAGCGTGACATGGGCAGCACCCCGCGTTCGGAGAACC
GACTGAAGAGGAAAGTGTTTTAACCGTCGACCTCGGA-TACTAGAACCTAAGCAGCAGCAGCAGCTCCATGTTCCACATG
AGTTCTGCACCATCTTTGCGATGCGAGGTCCCTGGAGTAGCCTTATTATTATTAGTGTGTAGCTTCTATCTGCTGTGCTC
CCGTGTTTCAGTAGATGAATTGATGTTGTTTCATGCCAATTGGGAGGCTTATCGCCTTGTTATTGTTGTATTAATGTCAT
GAACTTGTGAGGAAACTGGTAGTGTACTGTGTACCAGCACGTTGTTCTATGGAATCCTTTTCAGTCGTGAGAGGTGATCG
GCGCCCTCAATGGCCATCGTTCGTGGATGCTAGAACACGGAACGGGACCCATAGTTTCC-TTTTTCCTTTCTCTTTTATT
AAGAGCAACCTACATTT-TTTTTAAAGCAACATATTTTATTCCTCAGATAATAGAC-ATATCGTTTACAATATAGTGAGA
AATAAAATAAAATCAGGGATTATAGATTCCCAAAACATAGAAGATTTTTCACTAAATGTGTTTTTCGCTAGGTTGTGAGC
CACTTCATTTGCTTCATGGCGACACCGTGTGTATCAGACACTCACAAAGTCCAGCCCTAAATGTTTGCATTCAAGTACCA
TTGCAACATCTGAGCCCACATACGTTTCTGGTTATTGCACTGTTTCCACCACAAAGTTACAATGTGACTCAATGATCACT
TTGTTACATCCGATCCTCCATGCTAGATATAATCCATTCCGGATAGCTGAGCCCACATACGTTTCTGGTTGTTGCGCTGC
TTCCACCACAAAACTACAATCCGACTCAATAATCATTTTGTTACATCCGATCCTCCCTACTAGATATAATCCATTCCGGA
TCGCTGTCATCTCTGCTGAGTCAATCGCTGGTCACCCGAGGAACGAATCATGTTGCCTCAACAATGAAGTTTCCTCTTCC
ATCACGGACAATAGAGCCTGTTGTACCGGAGAGTTTCAACTCGGAAAGCAGCATCAACATTGATTTTGACCACACCCCT
>SNPs
------S---S-S-------------------------------------------------------------------
S-SSSSS----------------------------------S-------------S--S--------------S------
------SSSSS---------------------------------------------------------------------
---------------------S-----S------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSS------
------------S--------------------SS--S-------------------S-------------S--------
-------S-----S----S------S----------------------------S----SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----S---------------
---------------S---------------------S----------------------S-------------------
----------------------------------------------------------------------------S---
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------------------------------------------------------------------------------S-
-------------------------------S------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------S-----------
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----------------------------------------------------------S---------------------
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----------------------------------------------------S---------------------------
-------------------------S------------------------------------------------------
------------------------------S-----------------------------------S-------------
--------------------------------------------------------S-----------------------
------------------------S-----------S--------------------------S----------------
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----------------------------------------------S---------------------------------
-S------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
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-----------------------------------------------------S--------------------------
----------------------------------S------SSSS-----------------------------------
--------------S--------------S----------------S---------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
---------------------------------SSS-S--S---------------------------------------
----S-----------------------------------------S---------S----------------------S
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
------------S----------------------------------------------S--------------------
-----------------S--------------------------------------S----S------------------
--------------------------------------------------------------------------------
-----------------------------------S-S-----------------------------------------S
--------------------------------------------------------------------------------
--S-----------------------------S--------------------------------------S--------
--------------------------------------------------------------------------S-----
--SS-------------------------------S--------------------------------------------
--------------------------------------------------S----------------------------
>forward_564
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GCACTACTGGCCGTTG
GATA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_1428
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AGTTGCTTTATTG
CGCTCTGG------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_924
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CAAATCTCGTGCGTGCGATC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2197
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------CTGTGAAGACCCTGAAATGCAC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CGATCCACGTGTACACTCCT---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_4735
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------CTTGCCAGAGAGATAACACAGC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AACTTCGAGAGTTCGCATCG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4767
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------TCACAGTGATAAAACTTATACGTGTCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_2224
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GACCCTGAAATGCACAACCAT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_5600
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TTGCAACATCTGAGCCCAC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
