>input_sequence_38542
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---------------------------------------------------------------------------ATGGC
CATTGCCATGGC--------------------------------------------------------------------
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---------------------CTCGACCTCCTCCCCTGTAGCGGCCCTAAAGCACCCCCATTTTCTAGACT---------
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-------CCAAGGCCCTGAAGTCTCTCAA----------------------------------------------GCGCG
CGAGAACCCGTTCATGCGCCCTCGCCGACGCTGACGCCGCCGCGGCCGCCCCCCGCACGTTCCAAGCGGAGCTCCGGCCG
GACTCGAAAAACGCGCCCGCGCTCTCCGCTGAGATCCGCCGTCTCGTTCGTGCAGGCCGCCTTCGCTCTGCGCTCTGCCT
CCTCGACCATTTATCCCACCGCGGCGTCCCGGCGAGCCCCTCAGCCTTCACTGCTCTCCTCTCCGCATGCCGCTCCCTCG
CCCACGCCCGTCAGATCCACGCCCACCTCCGTGTCCACGGCCTTGACTCCAATGAGTTTCTCCTAGCCAGGCTCGTCGAG
GTTTATCTTGCGGTCGGTGCTGCTGAGGAGGCCCGCCAGGTGCTCGGCGGTTTGCCCAG---------------------
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-----GGCCAGTGCCTTCTCGTGGAATGCT--------------------------------------------------
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----------------------------------------TTGCTCCACGGGCACGTTCGCAGGGGCCGGAGAGAGGCAG
GGGATGCTGTCGCTGGCGGGTTTGTGGAGATGCGTGCTGCTGGGGCTAATGCCAACGAGTACACGTACGGCTGTGTCCTC
AAGTCCATCTCTGGGAGTGCCAGGCCATCCATGGTCATGGCCACCGCCACACACGCCATGCTGGTCAAGAACGCATTTGC
AGGTGCGCCGGGCATGCTGATGACTGGCCTCATGGATGTCTACTTCAGGTGCGGGAAGGTGAAGCTGGCGATGATGGTGT
TTGAGGAAATGCCAGAGAGGGATGTCGTTGCATGGGGGGCAGTGATTTCTGGGTTCGCACACAAGGGGTTGAAGAGGGAG
GCACTGGAGCATTTCCGGTGGATGGTGGAAAACGGAGTCAAGGTGAACTCGGTGGTGCTCACCTCAATCGTGCCAGTTAT
TGGTGATATACGTGCACGGAACTTAGGGAGGGAGATTCATGGGTTGGTGCTGAAGAAGTTTCCAGACCGTAAAGATGTAG
CAAAGGTCCACGCAGGGCTGGTAGACATGTACTGCAAATGCGGCGATATGGTCTCTGGGAGGCGAGTGTTCTATAGCACC
AAGAAGAGGAATGCTGTCTCATGGACAGCATTAATGTCTGGGTATGCATCCAATGGGAGGCCAGATCAGGCGCTGAGGTG
CATAGTTTGGATGCAGCAAGAAGGAATCCGACCAGATCTCGTTGCGGTTGGTACTGTTCTCCCAGTATGCACAAAATTGC
GAGCATTGAGCGAGGGGAAGGAAATCCATGCATATGCTTTGAGGAGGTGGTTCCTGCCAAATGTCTCATTATGCACTTCG
CTCATCACCCTGTACGGTACATGCTGTCATTTAGAATACTCTCGCAGGGTGTTTCATGCTATGGATAAGAAAACTGTACG
AGCTTGGACTGCATTGGTTGATGCCTACCTAAAGAACAGAGACTCTTCAACTGCTATTGAAGTGTTCAGATCAATGCTGC
TGTCGAACCGTCGGCCTGATGCTGTTGCCATCACCAGGATACTGAGTGCCTGCTCTGATATTGGAGCATTACAACTTGGC
AAGGAAGTTCATGGTCAGGTGTTGAAGTTGCGGATGGAACCTCTCCCGTTAGTTGCCGCAGAACTTGTTAACATGTATGG
CAGGTGTGGGGACCTGAAGGCAGCACAGAGGGTGTTCAATCGAACAGACTCCAAGGGATCCTTGACGTGCACTGCAATAA
TAGAAGCTTATGCAATCAACCAGCGGCACAAGGAGGCACTGGATCTCTTTTCATGGATGCTGTCAAATAACTTTGCCCCA
ACTATTGTCACCTTCAATGTGGTTCTGAGAATCTGTGATGCAGCAGGATTGCATGATGAAGCTCTCGAGATTTTCGACTC
CATGGTACAAGGGTACAACCTGGAAGCATCTGAAGAGAATTATGACTGCATCATCAGCCTTCTTACTAGTGCTGGCAGGA
CTGCCGAA-----------------------------------------------------------------------G
CACAGCGTTTTGCTGATTTGAAAGCTGCACTGTTTAGTTCACCTGCTCCTTTTTTGGATTTTGAACAGCAGTAA------
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>chr5A_1_TraesCS5A01G110200
GTTGGGAAATGGAGTCGAAGTGGAAGTGGAAGGGGAACATGCAACGAATTATCCGGTGACTGCGTTTCTGCTGCGTAGGT
GAGGAGCCAAGGGAGGTGGAAGAACGTGGAGCCAACGCAAGGGGGTCGTTCTGTTCGCTAGTCAAGAAGTGGCGGAGGAT
GATGCGGCAGAGAGGGTCGTTCTGTTCGCTGGTCAAGCGGTAACGGAGGGTGATGTGACAGAGCAGCTGTGGTGGTAG--
-----------------------AAGTTGATGTGACGAACCTGCTGAGGTGGATAGGCTGCATGTCAAGAGAAATAGAAC
AGTGGGGATCAACTATTTAGATATTATATATTTGCCATGATACACGCACTAAAATTTGTCATGGTCCATACAAAAAATAT
TTTTCATGGTCAAAATACTAGAATTGCCATGGTTAAAATACTAAAATCACCAAGATCTATGAACTAAAATTGACATGATC
TATAAACTAAATTTGCCATGTTGAATTACTAAAAA-TGCCATGATCCATGAATTAAATTTGCCATGGTTAATTACTATAA
ATTTCCATGGTCAATTAATAAAAA-TTACCGTAAAAAATAGTTGAAATACAATAGTAGCATTGAATCTAGAATAAA--AA
-CTAGATGAAACATGTCATGGTAACTTTAGTTTAAATACTATGACAATGTCGGCGTAAACATCGTGGAAACTTTTGGCTA
-AAATAAATTATCGAAACATATCAACATGAAATCTAGTTTTGAAAAATCTAGTTTTGAAGATCTCGTCGAGGCAAATTTA
ATAGTGAAAACAGATTTTTAGTCGGACTTTTTATTTATGAAAT-AAACATTTTT-AGTTCTGA--AAACAAAATTTTTTT
CGCTGATGTCATTTGTTTTGACGTCTTTTCTGATAATACTGAAGTGCCGACTACTTAATTAATCAGTGAACGATCTGTAG
GTGGCCTAAATCTAGCTCGCTTGGTTCTATCCAGTCCACCTGGTTGCTTCTTCACTCCAAAAACTCACGCTCGCCATGGC
CATTGCCATGGC--------------------------------------------------------------------
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---------------------CTCGACCTCCTCCCCTGTAGCGGCCCTAAAGCACCCCCATTTTCTAGACT---------
--------------------------------------------------------------------------------
-------CCAAGGCCCTGAAGTCTCTCAA----------------------------------------------GCGCG
CGAGAACCCGTTCATGCGCCCTCGCCGACGCTGACGCCGCCGCGGCCGCCCCCCGCACGTTCCAAGCGGAGCTCCGGCCG
GACTCGAAAAACGCGCCCGCGCTCTCCGCTGAGATCCGCCGTCTCGTTCGTGCAGGCCGCCTTCGCTCTGCGCTCTGCCT
CCTCGACCATTTATCCCACCGCGGCGTCCCGGCGAGCCCCTCAGCCTTCACTGCTCTCCTCTCCGCATGCCGCTCCCTCG
CCCACGCCCGTCAGATCCACGCCCACCTCCGTGTCCACGGCCTTGACTCCAATGAGTTTCTCCTAGCCAGGCTCGTCGAG
GTTTATCTTGCGGTCGGTGCTGCTGAGGAGGCCCGCCAGGTGCTCGGCGGTTTGCCCAG---------------------
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-----GGCCAGTGCCTTCTCGTGGAATGCT--------------------------------------------------
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----------------------------------------TTGCTCCACGGGCACGTTCGCAGGGGCCGGAGAGAGGCAG
GGGATGCTGTCGCTGGCGGGTTTGTGGAGATGCGTGCTGCTGGGGCTAATGCCAACGAGTACACGTACGGCTGTGTCCTC
AAGTCCATCTCTGGGAGTGCCAGGCCATCCATGGTCATGGCCACCGCCACACACGCCATGCTGGTCAAGAACGCATTTGC
AGGTGCGCCGGGCATGCTGATGACTGGCCTCATGGATGTCTACTTCAGGTGCGGGAAGGTGAAGCTGGCGATGATGGTGT
TTGAGGAAATGCCAGAGAGGGATGTCGTTGCATGGGGGGCAGTGATTTCTGGGTTCGCACACAAGGGGTTGAAGAGGGAG
GCACTGGAGCATTTCCGGTGGATGGTGGAAAACGGAGTCAAGGTGAACTCGGTGGTGCTCACCTCAATCGTGCCAGTTAT
TGGTGATATACGTGCACGGAACTTAGGGAGGGAGATTCATGGGTTGGTGCTGAAGAAGTTTCCAGACCGTAAAGATGTAG
CAAAGGTCCACGCAGGGCTGGTAGACATGTACTGCAAATGCGGCGATATGGTCTCTGGGAGGCGAGTGTTCTATAGCACC
AAGAAGAGGAATGCTGTCTCATGGACAGCATTAATGTCTGGGTATGCATCCAATGGGAGGCCAGATCAGGCGCTGAGGTG
CATAGTTTGGATGCAGCAAGAAGGAATCCGACCAGATCTCGTTGCGGTTGGTACTGTTCTCCCAGTATGCACAAAATTGC
GAGCATTGAGCGAGGGGAAGGAAATCCATGCATATGCTTTGAGGAGGTGGTTCCTGCCAAATGTCTCATTATGCACTTCG
CTCATCACCCTGTACGGTACATGCTGTCATTTAGAATACTCTCGCAGGGTGTTTCATGCTATGGATAAGAAAACTGTACG
AGCTTGGACTGCATTGGTTGATGCCTACCTAAAGAACAGAGACTCTTCAACTGCTATTGAAGTGTTCAGATCAATGCTGC
TGTCGAACCGTCGGCCTGATGCTGTTGCCATCACCAGGATACTGAGTGCCTGCTCTGATATTGGAGCATTACAACTTGGC
AAGGAAGTTCATGGTCAGGTGTTGAAGTTGCGGATGGAACCTCTCCCGTTAGTTGCCGCAGAACTTGTTAACATGTATGG
CAGGTGTGGGGACCTGAAGGCAGCACAGAGGGTGTTCAATCGAACAGACTCCAAGGGATCCTTGACGTGCACTGCAATAA
TAGAAGCTTATGCAATCAACCAGCGGCACAAGGAGGCACTGGATCTCTTTTCATGGATGCTGTCAAATAACTTTGCCCCA
ACTATTGTCACCTTCAATGTGGTTCTGAGAATCTGTGATGCAGCAGGATTGCATGATGAAGCTCTCGAGATTTTCGACTC
CATGGTACAAGGGTACAACCTGGAAGCATCTGAAGAGAATTATGACTGCATCATCAGCCTTCTTACTAGTGCTGGCAGGA
CTGCCGAA-----------------------------------------------------------------------G
CACAGCGTTTTGCTGATTTGAAAGCTGCACTGTTTAGTTCACCTGCTCCTTTTTTGGATTTTGAACAGCAGTAATTTTGT
AAATATAAT----------------------------------------------------------TTTTGACCTCCCT
TCCAATATTAATAGAAGATTTGTCAAAATGATACTGATAAGAATTAGTATTTCACAACTCACAGAAAAGAAATATACTTT
GTTACTAACAAGTAATGCCATCAGTTGCTAGGTCGAAAATTCAATATTAACCTCAACTGCTGCACCACACCAATAACATT
ATTGCCTTTATTCCCTCACAACA--ATTATCGTATCAGAAAGTTAGGGGTTTGGGTTTATGGCTTATCTGTTCGCTTCAG
TTAGATTTTTTCCGGACTCATGCATGAATCTTCTTTCACATATTAAAAGCGAAGAGTTTGTTGCATTGCTTACTGAGCCA
TAATAAATAGGGTTAGTAATTTACGTAAGTTCTTTTTCCAGCAATAGGTGTTCATGTAGAAATGTATAGCTAGTAGTCTA
ATTGTCCGTCTTCTTTTTACTGTTATGTGGAACATTGACCTTTTATATTGACATGGTAATTAAACAGCTAACGGCGATCC
TTTTATCTACAAAAGGAGTATATAACAGATAAAGAAAGAAACCTGTTGACTATTTTTGGAACAGAACATAGCTGATAACT
ATTTTTAGCTCTCGGAAATCCCTCCTATCCATTCCTTTATTGTCAGTTACTTCTAATATTTTGTTACTGTA-AAAAAAAC
TTC----------------------------------------------TAGTGGTTTGCGGCATTTCCTTTTGAGA-TT
TTTTCCCCATTTTGGTCCGTGCTACATTAGGAAAGAAATAAAAGAGGAATTTTAAAGGGAACTTCATTTCTGTGAAATCT
CTATCTTCTGTTCTGGTCTTTCCGAATTCAATTTCGCTTTGCATTGCTGTTTATCTTCTCTCCTCTCCATCCAAGGACTA
TAATGGGGAGTAGGCACCATGATGTTTTCTTGCTAGGGAAAAACAGATTGATACCAGGTTCTTGGTTCTTGTTATTGGCA
TGTGCCTTTACACCAAGCTGAAGTTTTCAGTGTTCAGCTGCCTTCCAAAGGTCAGAATTGTA
>chr5D_19
AGTGGAAG-------------------GGAAGGGGAACATGCAGTGAATTATCTGGCGACTGCATTTCTGCTACGTAGGT
GAGGAGCCAAGGGAGGTGGAAGAACGTGGAGCCAACGCAAGGGGGTCGTTCTGTTCGCTAGTCAAGCAGTGATGGAGGAT
GATGCGGCAGAGAGGGTCGTTCTGTTGGCTGGTCAAGCGGTAACACGGGATGATGTGGCAGAGCAGCTGTGGTGGTAGGG
CCCATCTATAAGCCGGTAATTCAAAGTTGATGTGTCGGACCTGCTGAGGTGGATAGGCTGCACATCAAGAGAAATAGGAT
AGTGGGGATCAACTATTTAGGTATTATAGATTTGCCATGATACATGCACTAAAATTTTCCATGGTCCATACAAAAAATAT
TTTTCATGCTCAAAATACTAGAATTTCCATGGTTAAAATACTAAAATTACCAAGATCTATGAACTAAAATTGCCATGATC
TATAAACTAAATTTACCATGTTGAATTACTAAAAA-TTCCATGATCCATGAATTAAATTTGCCATGGTTAATTACTAAAA
ATTTCCAAGGTTAATTAATAAAAAATTACCGTAAAAAGTAGTTGAAATACAATGGTAGCATTAAATCTAGAATAAA--AA
ACTAGATGAACCATGTCATGGCAACTTTAGTGTAAACACGATGGCAATGTTGGTGTAAACATCATGAAG-CTTTTGACTA
-AAATAAATCATCGAAACATATCAACATGAGATCTAGTTTTAAAAA---------------TCTCGTCCAGACGAATTTA
ATGGTGAAAACGGATTTTTAATCGGACTTTTTATTTATGAAATAAAACAGTTTT-AAGTCTGA--AAACAAAAAAAA-TT
CGCTGATGTCATCTGTTTGGACGTGTTTTCTGGTA---------------------------------------------
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>chr5B_322
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--------------------------TAGATTTGTCATGATACATGCATTAAAATTTGTCATGGTCCATACAAAAAATAT
TTTTCATGGTCAAAATACTAGAATTTCCATGGTTAAAATACTAAAATTACCAAGATCTATAAACTAAAATTGTCATAATT
TATGAACTAAATTTGCCATGTTGAATTACTAAAAAATGCCATGATCCATGAATTAAATTTGCCATGCTTAATTACTAAAA
ATTTCCATGGTCAATTAATAAAAA-TTGTCGTAATAAGTAGTTGAAGTACAATGGTAGCATTAAATCTAGAATAAA--AA
A-TAGATGAAACATTTCATGCCAACTTTAGTGTAAAGACTATGGCAACGTCGGTGTAAACATCATGGATACTTTTGGCT-
--AAAAAATCGTCGAAACATATCAATATGGGATCTAGTTTTGAAAA---------------TCTCGTTGAGACAGGTTTA
ATGATGAAAT-ATATTTTTAATCAAATTTTTTATTTATAAAT---AACATTTTT-AAGTCTGA--AAACAAAAAGAT-T-
-----------TCTGTTTTGACATGTTTTC----AATACGGAAGTGCCGACTATTTAATTATTCTTTTTTGCGGGAAAGC
GTTGCTACTTTATTCATTGTCCATAGCTTTGTGTACGGAGATCTTCGAGCTAATACACCCCGGAGCCACATGGAACCAAA
TCTTACACAACGATTTACAACAACCTTCCCTAGCAAGAATATGCGCTATTCTATTTACGGAACGACGTACCCATACCACC
CTAGATTCTTGAAACTGGCCTAGTAGTTCCTTTATCTCCTGAATAACTTGTCTGTTCGCCGATAAGTCCCGATGTTGGTT
GGCGATTTTTCCCACTGCAGTCTGTGAGTCCAGCTCCACCACCACCTTTTGGGCGTTCACTTCCTGCGCTAGAAGAATAC
CTCGACGACAAGCAAATAGCTCCGCAGTCTCTGGATTCGCACCAGCTGGGAAAAATGGCACGCTCCTGCCACAAACATGC
CATGGTAGTCCCTAAGAACAGCTCCACCTCCTCCAGATCCGCCCTGCTTTGCCATTGCCTTGTCCGTGTTGACTCTCGTC
CAACCCTCCTCCGGTTTCCTCCAGGATTTCATGGGCCGGTGCACAGGTGGGCTCGTGGGAGCCTCTCCGATTGTGTTCCA
CTCCTTGCCAAGGCAGACAACTCTCTCGGCGATCGCACCCGGATCCTCAATTCTTTTGCTCTCCCTCGCACTGTTGCGCG
CCAGCTACAGTTCATACCATGCCCTCATTACAATCTG-------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CCTCTCCTCATGGGCCGCCGCCG
CAAACCAGTCAAACACCCATGATCGCATGCAGTCCAGCGTATGAATGTGTTTCGAAAGCTACGGTAATGGTGCCCCGACC
TCTTGACTTAGCACTCTCCAGAACTAAACTGAATGGGGGCAGCGCCACATCCTGTGGACAATAGTCCCCTCCCTCCCACA
AGCAATACAAAAGAAATCGGGTTTAACCCGACACCGTAGAAGTTCGGCTCCCACCGCAAGCCCATTTTTTAACATTCTCC
AGCCATGTATCTTAACCTTATTCGGAACACCGGTCGACCATAGCTCCAACCAGGTTTTGTGGGCAGCAACGGAATCTGAT
GCAGAGGCCAGTGCCTTTTTGGACTCCTTAATATTCATACCGAGATGATACGCTGACCTGACAGTGAACATACCACTCTT
TGTGAAGTTCCAGGCTCTGTAGTCCTCTGTACCAGGACCTTCCACCAAAATCTGCCTTATATCTTTAGCATCGCTAGGAG
TAAAAATCACTTTCAGCTTGCCCTCATCCCAACTTGTCCCTTGCTCCACTAGTAGGTCTTCCACTTTCACCGTATTTGGT
ACGTAGTTGGCTCCCAGTGGAACCATACTACCTGCCCTCGGAATCCAGTGATCATGCATCACATTAATTCTTGATCCATC
ACCAATTCACCAAATAAGACCGTGAGCTAGAAGACCCCTTCCATGCATCAGACTTCTCCACGTATATGAACAACTCCGTG
GGCATGGTGCAGCCATGGTATCCATAACCTAGAAATACCGTGCCTTCAACACTC--------------------------
------------------------------------------------------TCGCACACAAGGATGTGGGGG-----
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------------------------------TCATCAGAATCCTCCAAACCTGCTTAGCTAGGAGAGCTTGGTTAAACACT
TCAAAGTCACGAAACCCCATCC----------------------------------------------------------
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---------------------------------------------------CACCAGCTTGCTTCCTAGTGCACATCTTA
TCCCAGGGCACCCAATGCACTTTTTTCTCACCGTCGGTTGCCCCCCACCAAATTTTGAAGAGATGGATTTAAGGTTCCCG
CACATTTTCTTGGAGAGCTGAAAGCAACTCATCGAATAGGTCGGTGTAGCTTGCAACACCGACTTGATGAGTACTTCCCT
TGCCGCCTTCGACAAGCCTTATCCTTTCCAGCCAGAGACCTTTCCCCTCGAGGCTTCTCTGGCATGCTTTTGACCAGCCT
ACCATAGGTGGTAGCCCTAGATATTTTTCATTCAGCGCCTCGGACTAGATCCTAACTAGATTCTTTATAGAATCCTTCTC
ATCACCGCGTCCCTTTCCGAAGAAGATAGACAACTTCTGCAAATTAACTCTCTGACCTGACGCCTCCTCGTACTCTTGTA
ATACTTGCCGAAGCCGCGCTATATTATTGCTGGAGGCCTCTAGTAACACAATGTTGTCATCAGCAAAAAGTAAATGTGTG
ACCGTGAAGACAGTGCGCCCAAAAGCCACACCCTGAATCTCCTTCTCCCGCTGGGCCTGTTTCAAAAGGGCCGAGAAACC
CTCGCCACAGAATAAGAAGAGGTAAGGAGAAATAGGATCTCCTTGGCGTAAACCTCGGGAGGG-----------------
--------------------------------------------------------------------------------
-----------------------------------AAGAAATCTGTTTGAGAAGTCCCCGTTGAGTTTCACCGAGAATCT
AGCTGAAGATACACACCTCATAACCATGGCCGTCCATGAATGAGGGAACCCCAGCTTGGTCATCATATGCTCCAAGAAAG
ACCACTCCACTCTGTCATACACCTTCATCATATCTAACTTAACTGCGCATAATGGTTTCTTCCGCTTCCTTGTTCCAATA
GCATGAACGCACTCATAAGCATCGCGGACATTGTCGGTTAAAAGTCTACCCGGCACCAACGCACTTTACACCAAGCATCG
CG------------------------------------------------------------------------------
--------------------GATGTTTTCTTGCTAGGGAAAAACAGATTGATACCAGGTTCTTGGTTCTTGTTATTGGCA
TGTGCCTTTACACCAAGCTGAAGTTTTCAGTGTTCAGCTGCCTTCCAAAGGTCAGAATTGTA
>chr2A_325
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-----------------------------ATTTTCCATGATACATGCAC---AATTTGCCATGGTTCATACAAAAAAA--
---TCATGGTAAAAATACTAGAATTGTCATGGTCAAAATACTAAAATTGCCATGGTCTATAAACTAAAATTGTCATGATC
TATAAACTAAATTTGCCATGTTGAATTACTAAAAGTTGCCATGATCCATGAATTTAATTTGCCGTGGTTAATTACTAAAA
AAATTCATGGTCAATTAATAAAAT-TTGCCTTGAAAAGTAGTTGAAATACAATGGTAGCTTTAAATCTAGAAGAAACAAA
A-TAGATAAAACATATCATGAAAACTTTTGTGTAAACACTATGACAATTTCAGTGTAA-CATCATGGCAACCTTTGGCCC
TAAAAAAGTCGTCGAAACATATCAATTTGGGACCTAGTTTTGAAGA---------------TCTCTTCGAGGCGGACTTA
ATGATGAAAACATATTTTAAATTGGATTTTTTATTTAAGAGATAAAACATTTTTGAAGTCTGAAGAACCAAAAAGAT-TC
AACTGATGTCATTTGTTT--------------------------------------------------------------
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>chr5D_897
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---------------------------------------------------TACTTAATTAAT--GTGAACGATGTGTAG
GTGGCCTAAATCTAGCTCGCTTGGTTCTATCCAGTCCACCTGGTTGCTTCTTCACTCCAAAAACTCACGCTCGCCATGGC
CATTACCATGGC--------------------------------------------------------------------
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---------------------CTCGACCTCCTCCCCTGTCGCCGCCCTGAAGCACCCCCATTTTCTAGACT---------
--------------------------------------------------------------------------------
-------CCAAGCCCCTCAAGCCTCTCAA----------------------------------------------ACGCG
CGAGAACCCGCTCATGCGCCCTCGCCGACGCCGACGCCGCCGCGGCCGCCCCCCGCACGTCCCAAGCGGAGCTCCGGCCG
GACTCTAAAAACGCGCCCGCGCTCTCCGCTGAGATCCGCCGTCTCGTTCGTGCAGGCCGCCTTCGCTCTGCGCTCTGCCT
CCTCGACCATTTATCCCACCGCGGCGTCCCAGCGAGCCCCTCAGCCTTCACTGCTCTCCTCTCCGCATGCCGCTCCCTCG
CCCACGCCCGTCAGATCCACGCCCACCTCCGTGTCCACGGCCTTGACTCCAATGAGTTTCTCCTAGCTAGGCTCGTCGAG
GTTTATCTTGCGGTCGGTGCTGCTGAGGAGGCCCGCCAGGTGCTCGGCGGTTTGCCCAG---------------------
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-----GGCCAGTGCCTTCTCGTGGAATGCT--------------------------------------------------
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----------------------------------------TTGCTCCACGGGCACGTTCGCAGGGGGCGGAGAGAGGCAG
GGGATGCTGTCGCTGGCGGGTTTGTGGAGATGCGTGCTGCTGGGGCTAATGCGAACGAGTACACGTACGGCTGTGTCCTC
AAGTCCATCTCTGGGAGTGCCAGGCCATCCATGGTCATGGCCACCGCCACACACGCCATGCTGGTCAAGAATGCATTTGC
AGGTGCGCCGGGCATGCTGATGACTGGCCTCATGGATGTCTACTTCAGGTGCGGGAAGGTGAAGCTGGCGATGATGGTGT
TTGAGGAAATGCCAGAGAGGGATGTTGTTGCATGGGGGGCAGTGATTTCTGGGTTCGCACACAAGGGGATGAAGAGGGAG
GCACTGGAGCATTTCCGGTGGATGGTGGAAAATGGAGTCAAGGTGAACTCGGTGGTGCTCACCTCAATCGTGCCAGTTAT
TGGTGATTTACGTGCACGGAACTTAGGGAGGGAGATTCATGTGTTGGTGCTGAAGAAGTTTCCAGACCGTAAAGATGTAG
CAAAGGTCCACGCAGGGCTGGTAGACATGTACTGCAAATGCGGCGATATGGTCTCTGGGAGGCGAGTGTTCTATAGCACC
AAGAAGAGGAATGCTGTCTCATGGACAGCATTAATGTCTGGGTATGCATCCAATGGGAGGCCAGATCAGGCGCTGAGGTG
CATAGTTTGGATGCAGCAAGAAGGAATCCGACCAGATCTTGTTGCGGTTGGTACTGTTCTCCCAGTATGCACAAAATTGC
GAGCATTGAGCGAGGGGAAGGAAATCCATGCATATGCTTTGAGGAGGTGGTTCCTGCCAAATGTCTCATTATGCACTTCA
CTCATCACCCTGTACGGTGCATGCTGTCATTTAGAATACTCTCGCAGGGTGTTTCATGCTATGGATAAGAAAACTGTACG
AGCTTGGACTGCATTGGTTGATGCCTACCTAAAGAACAGAGACTCTTCAACTGCTATTGAAGTGTTTAGATCAATGCTGC
TGTCGAACCGTCGGCCTGATGCTGTTGCCATCACCAGGATACTGAGTGCCTGCTCTGATATTGGAGCATTACAACTCGGC
AAGGAAGTTCATGGTCAGGTGTTGAAGTTGCGGATGGAACCTCTCCCGTTAGTTGCGGCAGAACTTGTTAACATGTATGG
CAGGTGTGGGGACCTGAAGGCAGCACAGAGGGTGTTCAATCGAACAGAGTCCAAGGGATCCCTGACGTGCACTGCAATAA
TAGAAGCTTATGCAATCAACCAGCGGCACAAGGAGGCACTGGATCTCTTTTCATGGATGCTGTCAAATAACTTTGCCCCA
ACTATTGTCACCTTCAATGTGGTTCTGAGAATCTGTGATGCAGCAGGATTGCATGATGAAGCTCTCGAGATTTTTGACTC
CATGGTACAAGGGTACAACCTGGAAGCATCTGAAGAGAATTATGACTGCATCATCAGCCTTCTTACTAGTGCTGGCAGGA
CTGCCGAA-----------------------------------------------------------------------G
CACAGTGTTTTGCTGATTTGAAAGCTGCACTGTTTAGTTCACCTGCTCCTTTTTTGGATTTTGAACAGCACTAATTTTGT
AAATATAAT----------------------------------------------------------TTTTGTCCTCCAT
TCTAATATTAATAGAAGATTTGTCAAAATGATACTGATAAGAATTAGTATTTCACAACTCACAGAAAAGAAATATACTTT
GTTACTAACCAGTAATGCCATCAGTCGCTAGGTCGAAAATTCAATATTAACCTCAACTGCTGCACCACACCAATAACATT
ATTGCCTTTATTCCCTCACAACACGATTATCGTATCAGAAAGTTAGGGGTTTGGGTTTATGGCTTATTTGTTCGCTTCAG
TTAGACTTTTTCCGGACTCATGCATGAATCTTCTTTCACATATTAAAAGCGAAGAGTTTGTTGCATTGCTTACTGAGCCA
TAATAAATAGGGTTAGTGATTTACTTAAGTTCTTTTTCCAGCAATAGGTGTTCATGTAGAAATGTATAGCTAGTAGTCTA
ATTGTCCA---TCTTTTTATTGTTATGTGGAACATTGACCTTTTATATTGACATGGTAATTAAACAGCTAACGGCGATCC
TTTTATCTACAAAAGGAGTATATAACAGATAAAGAAAGAAACCTGTTGACTATCTTTGGAACAGAACATAGCTGATAACT
ATTTTTAGCTCTCGGAAATCCCTCCTATCCATTCCTTTATTGTCAGTTACTTCTAATGTTTTGTTACTGTAAAAAAAAAC
TTC----------------------------------------------TAGTGGTTTGCGGCGTTTCCTTTTGATATTT
TTTTCCCCATTTTGGTCCGTGCTACATTAGGAAAGAAATAAAAGAGGAATTTTAATTGGAACTTCATTTCTGCGAAATCT
CTATCTTCTGTTCTGGTCTTTCCGAATTCAATTTCGCTTTGCATTGCTGTTTATCTTCTCTCCTCTCCATCCAAGGACTG
TAATGGGGAGTAGGCACCATGATGTTTTCTTGCTAGGGAAAAACAGATTGATACCAGGTTCTTGGTTCTTGTTATTGGCA
TGTGCCTTTACACCAAGCTGAAGTTTTCAGTGTTCAGCTGCCTTCCAAAGGTCAGAATTGTA
>SNPs
SS---S-SSSSSSSSSSSSSSSSSSSS----------------SS--------S--S------S--------S-------
------------------------------------------------------------------S----SS-------
--------------------------S-----------------SSS--S-------S----------------------
----------------------------------S--S------------------------SS-------------S-S
--------------------S-------S---------------S-----------------------------------
-----------------------------------------------S------------------------S-------
-----------------------------------------------------------------------------S--
-------------------------------------S---------------S--------S-----------------
---------------------S---------S----S----------------S---------S----------------
---------S--------------------S---------------SSSSSSSSSSSSSSS-------------------
--S-----------------S-----------------------------------SS---------------SSS-S--
------------------------S-------S------S------------------------S---------S-----
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----S---------------------------------------------------------------------------
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---------------------------------------S--S-----S-------------------------------
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-----------------S--------------------------------------------------------------
-------------------------------S----------------------------S-------------------
-----S--------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-------------------------------------------------------------------S------------
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------------------------------------------------------------------S-------------
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-----------------------------------------------------------------------S--------
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-------------------------S------------------------------------------S-----------
--------------------------------S-----------------------------------------------
-------S---------------------------------S--------------------------------------
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---------------------------------------S----------------------------------------
-------------------------------------------------------------------------------S
------------------S-------------------------------------------------------------
------------------------------------------------------------------S-------------
----------------------------------------------------------------------------S---
--------------------------------------------------------S-----------------------
------------------------------------------------S------------S------------------
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--------------------------------------------------------------------------S-----
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-----S--------------------------------------------------------------------------
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---------S---------------S------------------------------------------------------
-------------------------------------------------------------------S------------
-----S--------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-------SSSS--------S------------------------------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------------------S----------------------
---------------------------------------------------------------S-----------S----
-------------------------------------------------------SS---------------S-------
-------------------------------------------------------------------------------S
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>forward_304
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--------------------------------------------TGAGGTGGATAGGCTGCATG----------------
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>reverse_3080
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---------------------------------------CGTTGCGGTTGGTACTGTTC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_2753
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCCGGTGGATGGTGGAAAAC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_3755
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CGACTC
CATGGTACAAGGGT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_3497
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AACCTCTCCCGTTAGTTGCC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_4960
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
TAATGGGGAGTAGGCACCA-------------------------------------------------------------
--------------------------------------------------------------
