>input_sequence_38541
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---------------------------------------------------------ATGGCGAGTGGACGTACAACATC
TGCGTCCGTCCGCGGACCGCGCTTCGCCGGCGCCGGCCGCCGCGGCGCCCTCCTCCTCGCGCTGCTCCTCGCCGCCGCGG
CCGCCTTACTCCCAGTAGCCGAGCCTTCCTGCCCCCGAGGTCTCCCCTTCCTTCCCCTTTCAGTTTACTTCTGCAGTTCT
TGGAACTTCCGTT----------------CATTTAC---------------------TAGCCAAGATCATATTTAAAATT
TACAAACTGATCTAAGTTCCCAGTGATTTTGAAGGTTACCGGTGAATTTAAGATAGCAATGAGATTTCAGTCAGTTCGAA
CCAGTTCAGTACCAGATCTAAGTGTCTT-----ACCTTTGTCTAGCAAGT--ACCGGAGCACTGGATAACAGTCAGTTCA
GTTCTAGCAACTGCTAA-------CTAAATGCACCAAGTTCTAGTCATCTAGTGTATTTACCTACCCAAGCTAATCTCTA
TTCTAGCAAGTC-----------TATCTAGTATATGCAGCCAAACTGAGTTACTGATCTTGGTTCTACCAAGTGCTAACT
GTATCTACCATCTTATTCAGACAATTCAGTCGTGAAAGATATAAACAAAATGCACCAGAGCAACTATGGAATTGGAGGAT
TCTCGCATATAACCGTCGCTGGCGCGCTAGCTCACGGCATGAAGGAGGTGAGTAATCAATCCAGGAACCAGACTGTACCT
TGAGTTTCTCCCATTTCATGTTGCTATGAATTTATGCAGACCTTTTCTTGGATGTAC-TCATGTATATATATGGTTTCTT
TGGTTCACCTGTATTGGAAAATGTGCCGATCTAAGATGGAGCTGTTCCTTCTTGCTTATTATGTGAAATGCTTTCCTCTA
GGTGGAGGTGTGGCTCCAAACAATTAGTGCGGGCCAGAGGACACCGATCCACAGACACTCGTGTGAGGAGGTCTTTGTTG
TCCTCAAAGGGAGAGGCACTCTCTTGCTGGGGTCGACCTCACTGCCGTACCCGGGAACGCCTCAGGAGATTCCTGTCTTT
CAGAATAGCACATTCACAGTTCCTGTAAATGATCCACACCAGGTAAAGATGATGGATGGCTGCCGCTATTATTCAGCACA
CTCTGTAGTCATGAAACCATCGCTAGATTTTAAGATTATGCATTGGAATCCATTTGCATACTAGTGCTTACACCATGCCC
CTTTTGATTGCAGGTTTGGAATTCTGATGAACATGAAGATTTACAGGTGCTTGTGATCATATCGCGCCCACCTGTGAAGA
TGTATGTATACCTTGCTTGAATGTCTTATCCTATAGTAGTTGACAACATAAACTGAATTGATTTGTTCACACCCATCACT
GTAGAGTAACTTGTGTTGGGTGATATACACACATGTTGTCAAAACCAATTTTA-CCCCCAAACCGCTGCTTGTTCAGTAC
TGAAAAAAAAA------TTCAAAGGTGGGAAAATGGCATAGTGTTTTATTTTTAACAATTTTCTTCCTTTAAAATCCAAC
ACTTGGAGTTCGAACACAATCTAAGTACCGAGAACCTTTTCATATCTCCTCATAAGTACAACAAAACATCGATGACTTAA
TTTCCAAATATTACAAAGTAAATACCCGTAACTTGAAATGAACATGAAACACTGTCATAGATCGCTCGACGGGCCCAGAC
CATCAGCATCCCTAATCAACTGGATAGGAGTAGCGATAGATGTTGCCTAGACGGTGGCTTCAGACTTACTGTTGTATTTC
TTTGTAAGGTCTTTTGAGAATAATTAATAAAGTGGCTGCATGCATCGCCTAGATGCAGAGGCCGGGGGTCTTCCTCCTTT
TCTAAAAAAAAATAAAAATCGCTCGACGGGCCCTCCACGAATCTTCCTCTGATGTTGTGTCCAATTGTCACACATTTTAC
ATGTTAATTCGATATGAGCAATGCATCTATGGATGTGAAATACTACTCTACGTTTTTTTTATATCGGAAATGTTGCTTGT
TGTAGATTTCTGTACGAAGATTGGAGTATGCCTCACACGGCAGCGAAGTTGAAGTTCCCCTTCGTCTGGGACGAGGACTG
CTTAGACGCACCTAAAGATGAACTGTAG----------------------------------------------------
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>chr5A_1_TraesCS5A01G098900
CTTAGGTATATAGGATTCCTTCGCAGCTTATCTGTTGGAATGTATAGGCACGCTACACCCTCGGTCCACCTAATTATTCG
GTGGTTTCTTCTCAATTTCCCATGTCTTCTCTA---CTTTAGATTCCATTGTTGCTTGCTTCCTTCGCGGTGAGCCTGTG
ACCTGGATGCACCAATTGGAGTCGGAGTCCAGACAGAGGTGCTTGCCCGATGAGATCTTGAACCAGACTATCAGACTCGT
TGCCGCCGGCCGCACATGGTC--TTCTTCCCAAATAAATCAAAGTTCATTTCATCCG-----------------------
------TTTTTGTTTCTATGTCCATTGTTTCTGACATAGTTC-----TCATGCAGAATGGTCTTTCGTTTATATGTTCTA
TTTTTAATACATCATAAGTTTATAGCGAAGTAAGAACTGAATCTCAAAAAGATGCCATTTTATGATAAGTGTTTTTA--G
CAAAAGAGTCAAATGACATTTTGAATAACATTGCGTACGAAGAATATCAAAAGAATGCTAGAAGGATGACAAGGTTTT--
----------T----T---TTGCGAGAAGAAAGATGTCATGTTTTATGATAAATAATCTAGTATTT-CCAGGTTCTGAGA
ATAGCTTTCTTATAAGATGTACTT-----------------CAACTACGCAGCAACAAGATCCATACATGAAGTTTGCTT
TGGTACACCCCCTATTATACTAATTTTGTTTTGAGAATCATATTTTTATATGAATCACTTTCTGCCAAAATC---ATGTT
TTCTTAATTGCCAACGATTTTATCGAGGGCCTAATTTTTGATTTGGCACAGGGCCCC-ATTTTCGCGGGTACGGCCCTGT
CCTGATCCAGATGCAGACCTATACTATAAAAAATGCAATATGCATGTCTGACATGTTTATGCACTGTAGCCATTTCTCAA
AGTAGTGCTACTA----------GTAGTAGTATATTAGTAC----ATCACATGTCTGCAACACTATTAATTCAGAAT-CG
TCGACAAGGTGTGGAAAACCGAAGACAGACACACGTGAGAAAGAAAGCGCTAGAAAGATGGCGAGTGGACGTACAACATC
TGCGTCCGTCCGCGGACCGCGCTTCGCCGGCGCCGGCCGCCGCGGCGCCCTCCTCCTCGCGCTGCTCCTCGCCGCCGCGG
CCGCCTTACTCCCAGTAGCCGAGCCTTCCTGCCCCCGAGGTCTCCCCTTCCTTCCCCTTTCAGTTTACTTCTGCAGTTCT
TGGAACTTCCGTT----------------CATTTAC---------------------TAGCCAAGATCATATTTAAAATT
TACAAACTGATCTAAGTTCCCAGTGATTTTGAAGGTTACCGGTGAATTTAAGATAGCAATGAGATTTCAGTCAGTTCGAA
CCAGTTCAGTACCAGATCTAAGTGTCTT-----ACCTTTGTCTAGCAAGT--ACCGGAGCACTGGATAACAGTCAGTTCA
GTTCTAGCAACTGCTAA-------CTAAATGCACCAAGTTCTAGTCATCTAGTGTATTTACCTACCCAAGCTAATCTCTA
TTCTAGCAAGTC-----------TATCTAGTATATGCAGCCAAACTGAGTTACTGATCTTGGTTCTACCAAGTGCTAACT
GTATCTACCATCTTATTCAGACAATTCAGTCGTGAAAGATATAAACAAAATGCACCAGAGCAACTATGGAATTGGAGGAT
TCTCGCATATAACCGTCGCTGGCGCGCTAGCTCACGGCATGAAGGAGGTGAGTAATCAATCCAGGAACCAGACTGTACCT
TGAGTTTCTCCCATTTCATGTTGCTATGAATTTATGCAGACCTTTTCTTGGATGTAC-TCATGTATATATATGGTTTCTT
TGGTTCACCTGTATTGGAAAATGTGCCGATCTAAGATGGAGCTGTTCCTTCTTGCTTATTATGTGAAATGCTTTCCTCTA
GGTGGAGGTGTGGCTCCAAACAATTAGTGCGGGCCAGAGGACACCGATCCACAGACACTCGTGTGAGGAGGTCTTTGTTG
TCCTCAAAGGGAGAGGCACTCTCTTGCTGGGGTCGACCTCACTGCCGTACCCGGGAACGCCTCAGGAGATTCCTGTCTTT
CAGAATAGCACATTCACAGTTCCTGTAAATGATCCACACCAGGTAAAGATGATGGATGGCTGCCGCTATTATTCAGCACA
CTCTGTAGTCATGAAACCATCGCTAGATTTTAAGATTATGCATTGGAATCCATTTGCATACTAGTGCTTACACCATGCCC
CTTTTGATTGCAGGTTTGGAATTCTGATGAACATGAAGATTTACAGGTGCTTGTGATCATATCGCGCCCACCTGTGAAGA
TGTATGTATACCTTGCTTGAATGTCTTATCCTATAGTAGTTGACAACATAAACTGAATTGATTTGTTCACACCCATCACT
GTAGAGTAACTTGTGTTGGGTGATATACACACATGTTGTCAAAACCAATTTTA-CCCCCAAACCGCTGCTTGTTCAGTAC
TGAAAAAAAAA------TTCAAAGGTGGGAAAATGGCATAGTGTTTTATTTTTAACAATTTTCTTCCTTTAAAATCCAAC
ACTTGGAGTTCGAACACAATCTAAGTACCGAGAACCTTTTCATATCTCCTCATAAGTACAACAAAACATCGATGACTTAA
TTTCCAAATATTACAAAGTAAATACCCGTAACTTGAAATGAACATGAAACACTGTCATAGATCGCTCGACGGGCCCAGAC
CATCAGCATCCCTAATCAACTGGATAGGAGTAGCGATAGATGTTGCCTAGACGGTGGCTTCAGACTTACTGTTGTATTTC
TTTGTAAGGTCTTTTGAGAATAATTAATAAAGTGGCTGCATGCATCGCCTAGATGCAGAGGCCGGGGGTCTTCCTCCTTT
TCTAAAAAAAAATAAAAATCGCTCGACGGGCCCTCCACGAATCTTCCTCTGATGTTGTGTCCAATTGTCACACATTTTAC
ATGTTAATTCGATATGAGCAATGCATCTATGGATGTGAAATACTACTCTACGTTTTTTTTATATCGGAAATGTTGCTTGT
TGTAGATTTCTGTACGAAGATTGGAGTATGCCTCACACGGCAGCGAAGTTGAAGTTCCCCTTCGTCTGGGACGAGGACTG
CTTAGACGCACCTAAAGATGAACTGTAGGTTGGAAAGTGCTCACATGGCAGCGCATCGGCCTCAGTCAGCGTACTGGTCA
AGTGCGGTGTACAGCTTGCCTGCCTCCTAAATAATGCGCATGTCTGTAACATCCTTTCTGTTGGAACAACATTTTCGTGA
CGGATTATGTACTACTTGAGTGCATGAAGCAGCCTTCTGCAGCAAGAGCTATTTCCAAATTTTGAATTACCACTGTATTC
TAG-----------------------------------------------------------------------------
---------------------ACTGCAAGCGTCGCTGATCTTCGTCAGAGGGTCATTGTTCAGCAGATTTGGTGTTGAAT
CCTGAACAAATTTTTTAACTCTGCATCCTATGGCTAACATGAGTGAATCTAATTCCTTCAACTTGGTAAACGGCCACGAA
GCAATTACAGTACTTACTATAGAACATAAATTAGTCAGAGTGGTATCCTGATTGATTTTATTTTATTTTTTGCAAAAGGA
GGATGTACCCCCGGCCTCTCCATCTGGATCATGCATGTAGCAATTTTATTAATTATTCGTAAAGACCATACAAGGTGATA
CATCATTAAGGCTGAAGCCGCCAACTTGACAACGCTGTTGCTACTTCTATCCCCTTGACGAAGGTGTGCCAAATGTTCAG
GTTTAATATCAAACAGGCATCGCACCAAAGTCTAACATCTAAAGTTGGATGCCTCATCCAAACCACTATCCTGATTGATA
TATAGCAAAAAGAAGTCAGACAAAGAGCATCTCCACTCCCCCACCCCCTCCCCCCCCCCAACAGGCCCCCCAGGGCGCCT
TTTTTAGCGCCGACGCCGAAAAATCGGCCTGGTCATGTCCCCAGGGTCTTCTTTATCGTCGGTTTGGACCGAAGTAACAG
CCGGCGAACCCGAACCGAACCCAGCCCCCCTGGGGGCGCCGGCCGAAGCAAAAAGGCGCGTGGGCCCGCTTGGTCGGCGA
CAGATAGGCCTTTTCCTGCCGTTTCCCTCCTTTCCCTTCGTTTCCTCATTGCTTCCTCCCTTCTGCCCCGCCACTCCCGC
CATTCT
>chr7A_15
--------------ATTCCTTCGCAGCTTATCCGTTGGAATGTATAGGCACGCTACACCCTCGGTCCACCTAATTATTCG
GTGGTTTCTTCTCAATTTCTCATGTCTTCTCTGCTTCTTTAGATTCCATTGTTGCTTGCTTGCTTCGCGGTGAGCCTGTG
ACCTGGATGCACCAATTGGAGTTGGAGTCCAGACAGAGGTGCCTGCCCGATGAGATCTTCAACCAGACTATCAGACTCGT
TACCGCCGGCCGCACATGGTC--TTCTTCCCAAATAAATCAAAGTTCATTTCATCCA-----------------------
------TTTTTGTTTCTATGTTCATTGTTTCTGACATAGTTC-----TCATGCCGAATGGTCTTTTGTTTATATGTTCTA
TTTTTAATACATCATAAGTTTATAGCGAACTAAGAACCGAATCTCAAAAAGATGCCATTTTATGATAAGTGTTTTTA--G
CAAAAGAGTCAAATGACACTTGGAATAACATTGCGTACGAAGAATATCAAAAGAATGCTAGAAGGATGACAAGGTTTT--
----------T----TTTTTTGCGAGAAGAAAGATGTCATGTTTTATGATAAATAATCTAGTATTT-CCAGGTTCTGAGA
ATAGCTTTCTTATAAGATGTACTT-----------------CAACTACGCAGCAACAAGATCCATACATGAAGTTTGCTT
TGATACATCCCCTATTATACTAATTTTGTTTTGAGAATCATATTTTTATATGAATCACTTTCTGCCAAAATC---GTGTT
TTCCTAATTGCCAACGATTTTATCAAGGGCCTAATTTTTGATTTGGCACAGGGCCCCCATTTTCGCGGATACGGCCCT--
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>chr7B_70
---------------------------------------------------------------------CTATTTATTCA
GTGATTTTTTCTCGATTTCTCATGTCTTTTCTGCTTCTTTAGATTCCATTGCTGCTTGCTACCTTCGCTGTGAGCTTGTG
ACCTGGATGCACCAATTGGAATCGGAGTCTAGGCCGAGGTGCCTTCCTGACGAGATCTTGAACCACACTACCAGACGCGT
TGCTGCCGGCCGCACATGGTCTTTTCTTCCCAAATAAATCAAAGTTCATTTCATCCCT----------------------
------TTTTTGTTTCTATGTTCATTGTTTTTGAGATATTTCACCACTCATGCCGAATGGTCTTTAGGTTATATGTTCTA
TTTTTAATACATCATAAGTGTATAGTGAACTAAGAACTCGATCTCAAAAAGCTGCTA--TTATGATAAGTTTTTTTA--G
CAAAAGAATCAAATGACATTTTGAAGAACATCGCGTACAAAGAATATCGAAAGAATGCTAGAAGGATGATACTTTTTTTT
TCTTTTCTTTT----TTCTTTGCGAGAAGAAAGGTGGCATGTTTTGTGCTAAATAATGTACTAATT-CCAAGTTTTGAGA
ATAGCTTTCTT----GATGTACTT-----------------CAACTACGCAGCAACAAGATACATGCATGGACTTTGCTT
TGGTACACACCCTATTATAATAATTTTGCTTTGAGAATTT--TTTTTATATGAATCACTTTCTGCTTTTAGGGTAATGTT
TTCCTAATTGCCAGCGATTTTATCAAAGGCCTAATTTTTGATTTGGCACAGGGCCCCCATTTTCTCGGGTACGGCCCTG-
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>chr1B_70
---------------------------------------------------------------------CTATTTATTCG
GTGGTTTCTTCTTGATTTCTCATGTCTTCTCTGCTTCTTTAGATTCCATTGCTGCTTGCTACCTTCGTTGTGAGCTTGTG
ACCTGGATGCACCAATTGGAGTCCGAGTCCAGGCCGAGGTGCCTTCCTGACGAGATCTTGAACCACACTACCAGACGCGT
TGCAGCCGGCCGCACATGGTCTTTTCTTCCCAAATAAATAGAAGTTCATTTCATCCCT----------------------
------TTTTTGTTTCTATGTTCATTGTTTTTGAGATAGTTCACCACTCATGCCGAATGGTCTTTAGGTTATACGTTCTA
TTTTTAATACATCATAAGTTTATAGTGAACTAAGAACTCGATCTCAAAAAGCTGCCA--TTGTGATATGTTTTTTTA--G
CAAAAGAATCAAATGACATTTTGAAGAACATCGCGTACAAAGAATATCGAAATAATGCTAGAAGGATGAAACG-TTTTTT
TCTTTTATTTTTTTCT---TTGCGAGAAGAAAGGTGGCATGTTTTGTGCTAAATAATGTACTAATTCCCAAGTTTTGAGA
ATAGCTCTCTTATAAGATGTACTT-----------------CAACTACGCAGCAACAAGATACATGCATGGACTTTGCTT
TGGTACACCCCCTATTATAATAATTCTGCTTTGAGAAT--------------------------------------TGTT
TTCCTAATTGCCAACGATCTTATCAAAGGCCTAATTTTTGATTTGGCACAGGGCCCCCATTTTCTCGGGTACGGCCCTGT
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>chr5D_148
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----------------------------------------------------------------------TGAGCATGTG
ACCTGGATGCACCAATTGGAGTCGGAGTCCAGACCGAGGTACCTGCCCGACGAGACCTTGAACCAGACTACCAAACGCGT
TGCCACCGGCCGCACATGGTCTG--CTTTCCAAATAAACCAAAGTTCATTTCATCCATTTTTGTTTCCTTTTTTGCGGGC
TATCCCTTTTTGTTTCCATGTTCATTGATTTTGAGATAGTTCACCACTCATGCCAAACGGTCTTTTGTTTATATGTTCTA
CTTTTAATACATCATAAGTTTATAGCGAACTAAGAACTCAATCTCAAAAAGCTACCA--TCGTGATAAGTTTTTTTTTGG
CAAAAGTACCAAATGGCATTTTGAAGAACATTGCGTATGAAGAATATCAAAAGAATGCTAGAAGGATGACAAGTTTTTTT
TC-------TT----TTATTTGCGAGAAGAAAGATGGCATGTTTTGTGCTAAACAATGTACTGATT-CCGAGTTTTGAAA
ATAGCTTTCTTATAAGATGTACTTAAACTACGGACTCCGTTCAACTACGCAGCAACAAGACACATACATGAACTTTGCTT
TGGTACACCCCCTATTATACTATTTTAGTTTTGGGAATCATC-TTTTATATGAATCATTTTATGCTAAAATA---GTGTT
TTCCTAATTGCCGATGATTTTATCAAGGGCCTAATTTTTTATTTGGCACAGGGCCCCCATTTTCTCGGGTACGGCCCTGT
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>chr5B_798
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-------------------------------------------------------------------------------T
CCTTATCCAGATGCGGAC-----CTATAAAAAATGCAATATGCATGTCTGACATGTTTATGCACTGTAGCCATTTCTCAG
AGTAGGGCTAGTACTAGTACACTGTAGTATTATATTAGTACCAAGATCACATGTCTGCAACACTATTAATTCAGAATTCG
TCGACAAGGTGCGGAAAACCGAAGACAGACACACGTGAAAAAGAAAGCGCTAGAAAGATGGCGAGTGGACACACAACAGC
TGCATCCGTCCGCGGGCCCCGCTTCGCCGGCGCCGGCCGCCGCGGCGCCCTCCTCCTCGCGCTGCTCCTCGCCGCCGCGG
CCGCCTTACTCCCAGTAGCCGAGCCTTCCTGCCCCCGAGGTCTCCTCTC----CCCCTTTCAGTTTACTTCTGCAGTTCT
TGGAACTTCCGTTCTCGATCAACACTTCACATTTAC---------------------TAGCTAAGATCATGTTTAAAATT
TACACACTGATCTAAGTTCCCAGTGATTTTGAAGGTTACCGGTGAATTTTATATAGCAATGAGATTTCAGTCAGTTCGAG
CCAATTCAACTCCAGATCTAAGTGCCTT-----AGTT---------AAGT--ACAGGAGTAATGGATAATAGACAGTTCA
GTTGTAGCCAATTCAACTCCAGATCTAAATGTATCGAGTTCTAGTCATCTAGTGTG----CCCACCCAAGCTAATCTCTG
TTCCAGCAAGTGCTAACTAACTGTATCTAGTGTATGCAGCCAAAT--------TGATCTCAGTTCTACCAAGTGCTAACT
GTATCTACCGTTGTATCCAGACAATTCAGTCGTGAAAGATATAAACAAAATGCACCAGAGCAACTATGGAATTGGAGGAT
TCTCGCATATAACCGTTGCGGGCGCGCTAGCTCACGGCATGAAGGAGGTGAGCAATCAATCCAGGAACCAAACTGTACCT
TGCTTTTCCATTCCTTGGT----CTATGAAGTTACGCAAACCTTTACTTGGATGTACCTCATGTATAGATATGGTTTCTT
TGGTTCATCTATATTGGACAATGTGTCCATCT-AGATGGAGCTGTTCTTTCTTGCTTATTATGTGAAATGCTTTCCTCTA
GGTGGAGGTGTGGCTCCAAACAATTAGTGCGGGCCAGAGGACACCGATCCACAGACACTCGTGTGAGGAGGTCTTTGTTG
TCCTCAAAGGGAGAGGCACTCTCTTGCTGGGGTCGACCTCACTGCCGTACCCGGGAACGCCTCAGGAAATTCCTGTCTTT
CAGAATAGCACATTCACGGTTCCTGTAAATGATCCACACCAGGTAAAGATGATGGATGGCTGCCATCATTATTCAGCACA
CTC-GTAGTCATGAAACCATCGCTAGATTTTAAGATTATGCATGGGAATCCATTTGCATGCTAGTGCTTACACCATGCCC
CTTTTGATTGCAGGTTTGGAATTCTGATGAACATGAAGATTTACAGGTGCTTGTGATCATATCGCGCCCACCTGTGAAGA
TGTATGTATACCTTGCTTGAATGTCTTAACCTATAGTAGTTGACAACATAAACTGAATTGATTTGTCCATACCCATCACT
GTAGAGTAACTTGTGTTGGGTGCTATACACACATGTTGTCAAAATCAATTTTATCCCCCAAACCGCTGCTTGTTCAGTAC
TGAGAAAAAAAAACAGTTTCAAAGGTGGGAAAATGGCATAGTGTTTTATTTT-GACAATTTTCTTCCTTTAAAATCCAAC
ATTTGGAGTTCGAACACAATCTAAGTACCAAGAACCTTTTCATATCTCCTCATAAGTAGAACAAAACATCGATGACTTAA
TTTCCAAATATCACAAAGTAAATACCCGTAACTTGAAATGAACATGAAACACAGTCACAG--------------------
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-----------------ATCGCTCGACAGGCCCTCCACGAATCTTCCTGTGATGTTGTGTCCAGTTGTCACACATTTTAC
ATGTTAATTAGATATGAACGATGCATCTATGGATGTCAAATACTACTCTAGTGTTTTTTGATATTGGAAATGTTGCGTGT
TGTAGATTTCTGTATGAAGATTGGAGTATGCCTCACACGGCAGCGAAGTTGAAGTTCCCCTTCGTCTGGGATGAGGACTG
CTTAGACGCACCTAAAGATGAACTGTAGGTTGGAATGTGCTCACATGGCAGCGCATCGGCCTCGGTCAGCGTACTGATGA
AGTGCGGTGTACAGCTTGCCTGCCTCCTAAATAATGCGCATGTCTGTAACATCCTTTCTCTTGGAACAACATTTTCGTCA
CGGATTATG---TACTTGAGAGCATGAAGCAGCCTTCTGCAGCAAGAACTATTTCCAAATTTTGAATTACCACTGTATTC
TAGTACT-------------------------------------------------------------------------
----------------AGTAGACTGCAAGCGTCGCTGATCTTGGTCAGAGGGTCATTGTTCAGCAGATTTGGTGTTGATT
CCCGAACAAAATTTTCAACTCTGCATCCTATGGCTCACATGAGTGAATCTAATCCCTTCAACATGGTAAACGGCCACGAA
GCAATTA-------------------------------------------------------------------------
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>chr5D_973
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-----------------------------CACACGTGAGAAAGAAAGCGCTAGAAAGATGGCGAGTGGACACACAACAGC
TGCGTCCGTCCGTGGGCCCCGCTTCGCCGGCGCCGGCCGCCGCGGCGCCCTCCTCCTCGCGCTGCTCCTCGCCGCCGCGG
CCGCCTTACTCCCAGTAGCCGAGCCTTCCTGCCCCCGAGGTTTCCCTTT----CCCCTTTCAGTTTACTTCTGCAGTTCT
TGGAACTCCCGTT----------------CTCGTCGACACTTCACATTTACTCGTATTAGCCAAGATCATATTTAAAATT
TACAAACTGATCTAAGTTCCGAGTAATTTTGAAGGTTAGCTATGAGCTTAAGATAGCAATGAGATATTAGTCAGTTCGAG
CCAGTTCAGCACCAGATCTAAGTGTCTTACGGTACCTTTGTCTAGCAAGTACACCGGAGCACTGGATAACAGTCAGTTCA
GTTCTAGCAACTGCTAA-------CTAAATGCATCGAGTTCTAGTCATCTAGTGTATCTACCTACCCAAGCTAATCTCTG
TTCTAGCAAGTC-----------TTTCTAGTGTATGCAGCCAAACTGAGTTACTGATCTCAGTTCTACCAAGTGCTAACT
ATATCTACCGTCTTATCCAGACAATTCAGTCGTGAAAGATATAAACAAAATGCACCAGAGCAACTATGGAATTGGAGGAT
TCTCGCATATAACCGTTGCCGGTGCGCTAGCTCACGGCATGAAGGAGGTAAGCAATCAATCCAGGAACCAGACTGTAC-T
TGAGTTTCTCCCATTTCGTGTTGCTATGAATTTATGCAGACCTTTACTTGCATGTAC-TCATGTATATACATGGTTTCTT
TGGTTCATCTGTATTGGAAAATGTGCCGATCTAAGATGGAGCTGTTCTTTCTTGTTTATTATGTGAAATGCTTTCCTCTA
GGTGGAGGTGTGGCTCCAAACAATTAGTGCCGGCCAGAGGACACCTATCCACAGACACTCGTGT---GAGGTCTTTGTTG
TCCTCAAAGGGAGAGGCACTCTCTTGCTGGGGTCGACCTCACTGCCGTACCTGGGAACGCCTCAGGAGATTCCTGTCTTT
CAGAATAGCACATTCACAGTTCCTATAAATGATCCACACCAGGTAAAGATGATGGATGGCTATCGCTATTATTTAGCACA
CTC-GTAGTCATGAAACCATCGCTAGATTTTAAGATTATGCATGGGAATCCATTTGCATGCTAGTGCTTACACCATGCTC
CTTTTGATTGCAGGTTTGGAATTCTGATGAACATGAAGATTTACAGGTGCTTGTGATCATATCGCGCCCACCTGTGAAGA
TGTATGTATACCTTGCTTGAATGTCTTATCCTGTAGTAGTTGACAACATAAACTGAATTGATTTGCTCATACCCATCACT
GTGGAGTAACTTGTGTTGGGTGCTATACACACATGTTGCCAAAACCAACTTTAT-CCCCAAACCGCTGCTTGTTCAGTAC
TGAAAAAAA---ACAGTTTCAAAGGTGGGAAAATGGCATAGTGTTTTATTTTGGACAATTTTCTTCCTTTAAAATCCAAC
ATTTGAAGTTCGAACACAATCTAAGTACCAAGAACCTTTTCATACGTCCTCATAAGTACAACAAAACATCGATGACTTAA
TTTCCAAATCTTACAAAGTAAATACCCGTAATTTGAAATGAACATGAAACACTGTCACAG--------------------
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-----------------ATCGCTCGACAGGTCCTCCACGAATCTTCCTCTGATGTTGTGTCCAGTTGTCACACATTTGAC
ATGTTAGTTCGATATGAACATTGCATCTGTGGATGTCAAATACTACTCTAGTGTTTTTTGATATCTGAAATGTTGCTTGT
TGTAGATTTTTGTATGAAGATTGGAGTATGCCTCACACAGCGGCGAAGTTGAAGTTCCCCTTCGTCTGGGATGAGGACTG
CTTAGACGCACCTAAAGATGAACTGTAGGTTGGAAAGTGCTCACATGGCAGCGCATCGGCCTCAGTCAGCGTACTGATGA
AGTGCGGTGTACAGCTTGCCTGCCTCCT-AATAATGCGCATGTCTGTAACATCCTTTCTCTTGGAACAATATTTTCGTCA
CGGATTATG---TACTTGAGAGCATGAAGCAGCCTTCTGCAGCAAGAACTATTTCCAAATTTTGAATTACCACTGTATTC
TTAGTTTCTTACCCCTTCATCCCATAATATAAGAGCGTTTTTACACCAGTGTAGTGTAAATAGTGTAAAAATGTTTTTAT
ATTATGGGACGGAGGGAGTAGCCTGCAAGCGTCGCTGATCTTGGTCAGAGGGTCATTGTTCAGCAGATTTGGTGTTGAAT
CCTGAACACAATTTTCAACTCTGTATCCTATGGCGCACATGAGTGGATCTAATTCCTTCAACTTGGTAAACGGCCACGAA
GCAATTACAGTACTTACTATAGAACATAAATTAGTCAGAGTGGTATCCTGAATGAT------------------------
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>SNPs
SSSSSSSSSSSSSS------------------S-----------------------------------------------
-------------------S------------S-----------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------S-----------------------
---------------------S-------------------------------S-----------S--------------
-----------------------------S--------------------------------------------------
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---S--------------------S-------------------------------------------------------
---S----------S---SSSSS--------------------------------------------------------S
-----S----S------------------S--------------------------------------------------
-----------S----------------------------------------------------------SS------S-
---------------S--S-------------------------------------------------------------
-------------------------------------------------SSSS---------------------------
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-------------------------------------------------------------------------------S
---------S----------------------------------------------------------------------
---------------------------------S-S---------------------S---------------------S
-------------------------------S---------------------------SS-------------------
---------S------S---------------------------------------------------------------
----------------S--S--------------------------------S---------------------------
-----------------S---------------------------S----------------------------------
-------S---------------------------------------S--------------------------------
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---S---------------------------------------S---------------S--------------------
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---------------------------------------------------------------------S----------
----------------------S---------------------------------------------------------
----------------------------------------------------SS--------------------------
-S---------------------------S--------------------------------------------------
---------------------------------------------------------S--SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS----------S-----------------------------------S----------------
-----------------S------------------S-------------SSS------S--------------------
--------------S--------------------------------------------------------S--------
----------------------------------------------------------------------------S-S-
-----------------------------------------------------------S------------------S-
---------SSS--------S--------------------------S--------------------------------
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------------------------------------------S-------------------------------------
----------S----S-------------------S--------------------------------------------
---------------------------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_895
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CCTGT
CCTGATCCAGATGCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2943
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CGGGGGTCTTCCTCCTTT
TC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1111
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGAAAGATGGCGAGTGGACG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2972
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ATAAAAATCGCTCGACGGGC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_2793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GTCATAGATCGCTCGACGGG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_3930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CAAACAGGCATCGCACCAAA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
