>input_sequence_38535
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--------------------------------------------------------------------ATGGGAAATGGC
GATGACGAGAAGGTGGAAGGCCTCCACCACGCTCGGCAGCCCCCGCACGGCGAGTCTTCTT-------------------
--CCTCCTCCCGCCACGCCACGAAGCGCCGACGCGCTCACGGCGCGGCAGCAGCCATGGCCGACCGCTTCTTCCCCAACG
ACCTCCCCGACTTCGTCGCCGAGGCACCCGACAGCGGCGACCCTCCCGCCGCCGGGCTCCGCGGCCTGCTCTCGCTCCCC
TACCCCAGGTTCTCCGACCGGCTCCTCCGCGCCGCCCTCCGGCTCAAAGACAAGGCACGCCATCTTTGCTTCATTTCTTG
TGTTGTGGTTCCATTTCGGGGCGCGCGCGCG--AGGTGCTCGACTGATTGTTTGTGTCCTGCAGGTCGTGCAAGAGACAT
GGACTAGGACGGGGGGCCAGGTGACGGACTACACGCTCTACACGGGCGCGCTCGGGACGGCGCTCCTGCTGTTCAAGTCC
TTCCAGGTCACCGGCGACCGCCGTGATCTCAACCTCGCTAGCGACATCGTCCAAGCCTGCGATGCCGCGTCACTTGGCCT
GCCGTACAATGGCGACTCCTTCTCATTGTTTCAGTTTTGTAGTTTTGTTTGGTTAGATAGATTGTTCTGGTCGTTGTTAA
TTCATGTGAAATGATCGCCTGGTTGCAAGGCGCAGGTTCTTGACTTTCATATGTGGGAGGGCCGGCGTCTGCGCTCTCGG
AGCAGTGATTGCAAAGCATTGCAATGATCAGTTGATGGAGACCAACTTTCTGAGCTCGTTTGATGAGGTGAAGCTTCTAT
TAAGCATAATTTCGGTTCTTGAGTCTGTATGTTAAATTCTGTGCTATTTTGCTACATGGTTGTAGAGCCACGGATGGTAT
ACCTTATGTTGTAGACAGAGTTGTCTTACATTTGTGATCTTGTAGATAATTATCACAGAGAAAGTTCCAAATGAGCTGCT
GTATGGAAGGGCGGGTTATTTGTGGGCTTGTTTGTTCCTGAATGAGCATCTCAGTGACAAGACAATTCCTGCCGAACACA
TTGTATGTTAACACTGTGATTCTGTTCCTCTTTTCACATTATTTGTTTCTGTAGAACAATGTAAAAGGTACAACTTATCT
AATCATGCAAAACCGCTGCAATGAGGCAGAGTTCTGTGGCAAAGGACATAATTATGGAGGGAAGGAAGCTGTCGAACAAG
GGGAGCTGCCCGCTGATGTATGAGTGGCATGGGAAGAAGTACTGGGGTGCTGCCCATGGACTTGCTGGAATCATGCATGT
TCTCATGCACACTGAATTGAAGCTGGATGAGCAGGATGACGTGAAGAATACTCTGCGGTACATGATCAGTAACCGGTTTC
CTAGTGGAAACTATCCCTCGAGTGAAGACAGTGAATCTGATCGCCTGGTGCATTGGTGCCATGGTGCCCCTGGTGTTGCT
CTTACACTCGCTAAGGCATATCAGGTATTGCTGCATCTGTATGTAGTTTTTCTATAGGATCTTTATGAGCCAGTATACAT
CTTATTCACAGCACATATTCATACCCATCTGGGAAGTTGTGCATGCATCTCCACATAGGCAAGTTTGTTCAGGCCTCAGC
AGGAGTTTTTACTGACGACCAATTAGGCTTTGGCACAAGTTGTAGCTATGACTGATGAGCAGCCAAGCAATAGTGTTCCA
TTAACTAAACTTTCCCTTTGATCACAGTGATGAGCTAACCGTTTGTGTTTCAGGTCTTCCAAGATGACCACTTCAAGCAG
TCCGCTGCAGAGGCTGCTGAAGTTGTCTGGAACCGTGGTCTTCTCAAGCGAGTTGGAATATGCCACGGTATAAGCGGGAA
TGCCTATGTATTCCTCTCACTTTATAGGCTAACCGGCAATGTTGAGTACCTCTACCGGGCTAAGGCTTTTGCTTGCTTTC
TGCTTGAAAATGCTGATCGATTGATTGCTGAGGAGGCCATGCATGGTGGTGACCGTCCGTTTTCATTGTTTGAAGGAAAG
GCTGGGATGGCATATCTCCTTTTAGACATGGTTAACCCCTCAGAATCAAGGTTCCCCACCTATGAACTTTGA--------
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>chr1B_1_TraesCS1B01G186500
AAAACAGCGAATGAGAAGACCTTTGCACTAAACTGAGAGGGTACCACC-TTAGTCCTGATAGGGATGAGGTCGTATGGCG
ATTGGAGCCGCCAGGACAATTTTCAACAGGGTCGCTGTATAAGGAGATATCCAACTCCACGACTCCATGCGACTTGTATG
GGCTGTGGGGAGCACGCTTTCCGTCCAAAATCAAGATCTTCTGATGGCAAGCCGCCCACAATAGAATCACGAGTAGGGAT
CAGGTGCAAAAACGACATGGCCCCGGAGATGGCAAATGCATCTGGTGCGGGGAATGCGAAGATCGGGATCATATTTTATT
TCAATGCATCACGGCTCGATTTATGTGGAATGCCGTACGTTCGCTGACGGGCTCTTCTTGGAACCCAAGTGGGTTCCCAG
ATTTTTACCGGCTTGCATCAGCCACTACCGGGAGGGATAGGAGGATTACATGGCTAGGGTTTGGGGCTCTTGCTTGCTCT
CTTTGGACCACGAGAAAC-AAAGCATTAATAGAGGGAGTATTTATCAGGCATCTCGCTGATATACTATACAAAATGATGT
CTTTCTTGCAGCCGTGAAAGCTACTGGCAAAGCAACGGGACAAAGGACTCGTGGAGGAGCTCGTCAAAAGGGTACGGGCA
AGATGCACTAAGCTTCGACGCTCCACATAGGGACATCAATGACATACC-TCTACATGTCGCCCTTAACTACCTTAAGAGC
TAGCACAGT-TTAC-CCGCCTTTACTAGCGCTACGCCACTATGTATTTGCCTCCGGGCTTGTATCCCT-GTATTCCTGTA
CTTTCGCTTTGTTGT-----------TTTGCCGTG-GCCGTTTGGCAGACTTGTTGGATTCGTGAGGGTCTCATTTTAAG
GTCGGGCAAGCCCCTCTTTTCTAAAAAAAACATTGAAGCGGTGAGCAGCTCCAT---GCCCTAAA-------GACGGCCG
GTACTCCACGTGTCCAAGCTCACCCACATACGTGCCAGCGTCGCCGAGGAGGAACCCGGCAGAAAAATATGGGAAATGGC
GATGACGAGAAGGTGGAAGGCCTCCACCACGCTCGGCAGCCCCCGCACGGCGAGTCTTCTT-------------------
--CCTCCTCCCGCCACGCCACGAAGCGCCGACGCGCTCACGGCGCGGCAGCAGCCATGGCCGACCGCTTCTTCCCCAACG
ACCTCCCCGACTTCGTCGCCGAGGCACCCGACAGCGGCGACCCTCCCGCCGCCGGGCTCCGCGGCCTGCTCTCGCTCCCC
TACCCCAGGTTCTCCGACCGGCTCCTCCGCGCCGCCCTCCGGCTCAAAGACAAGGCACGCCATCTTTGCTTCATTTCTTG
TGTTGTGGTTCCATTTCGGGGCGCGCGCGCG--AGGTGCTCGACTGATTGTTTGTGTCCTGCAGGTCGTGCAAGAGACAT
GGACTAGGACGGGGGGCCAGGTGACGGACTACACGCTCTACACGGGCGCGCTCGGGACGGCGCTCCTGCTGTTCAAGTCC
TTCCAGGTCACCGGCGACCGCCGTGATCTCAACCTCGCTAGCGACATCGTCCAAGCCTGCGATGCCGCGTCACTTGGCCT
GCCGTACAATGGCGACTCCTTCTCATTGTTTCAGTTTTGTAGTTTTGTTTGGTTAGATAGATTGTTCTGGTCGTTGTTAA
TTCATGTGAAATGATCGCCTGGTTGCAAGGCGCAGGTTCTTGACTTTCATATGTGGGAGGGCCGGCGTCTGCGCTCTCGG
AGCAGTGATTGCAAAGCATTGCAATGATCAGTTGATGGAGACCAACTTTCTGAGCTCGTTTGATGAGGTGAAGCTTCTAT
TAAGCATAATTTCGGTTCTTGAGTCTGTATGTTAAATTCTGTGCTATTTTGCTACATGGTTGTAGAGCCACGGATGGTAT
ACCTTATGTTGTAGACAGAGTTGTCTTACATTTGTGATCTTGTAGATAATTATCACAGAGAAAGTTCCAAATGAGCTGCT
GTATGGAAGGGCGGGTTATTTGTGGGCTTGTTTGTTCCTGAATGAGCATCTCAGTGACAAGACAATTCCTGCCGAACACA
TTGTATGTTAACACTGTGATTCTGTTCCTCTTTTCACATTATTTGTTTCTGTAGAACAATGTAAAAGGTACAACTTATCT
AATCATGCAAAACCGCTGCAATGAGGCAGAGTTCTGTGGCAAAGGACATAATTATGGAGGGAAGGAAGCTGTCGAACAAG
GGGAGCTGCCCGCTGATGTATGAGTGGCATGGGAAGAAGTACTGGGGTGCTGCCCATGGACTTGCTGGAATCATGCATGT
TCTCATGCACACTGAATTGAAGCTGGATGAGCAGGATGACGTGAAGAATACTCTGCGGTACATGATCAGTAACCGGTTTC
CTAGTGGAAACTATCCCTCGAGTGAAGACAGTGAATCTGATCGCCTGGTGCATTGGTGCCATGGTGCCCCTGGTGTTGCT
CTTACACTCGCTAAGGCATATCAGGTATTGCTGCATCTGTATGTAGTTTTTCTATAGGATCTTTATGAGCCAGTATACAT
CTTATTCACAGCACATATTCATACCCATCTGGGAAGTTGTGCATGCATCTCCACATAGGCAAGTTTGTTCAGGCCTCAGC
AGGAGTTTTTACTGACGACCAATTAGGCTTTGGCACAAGTTGTAGCTATGACTGATGAGCAGCCAAGCAATAGTGTTCCA
TTAACTAAACTTTCCCTTTGATCACAGTGATGAGCTAACCGTTTGTGTTTCAGGTCTTCCAAGATGACCACTTCAAGCAG
TCCGCTGCAGAGGCTGCTGAAGTTGTCTGGAACCGTGGTCTTCTCAAGCGAGTTGGAATATGCCACGGTATAAGCGGGAA
TGCCTATGTATTCCTCTCACTTTATAGGCTAACCGGCAATGTTGAGTACCTCTACCGGGCTAAGGCTTTTGCTTGCTTTC
TGCTTGAAAATGCTGATCGATTGATTGCTGAGGAGGCCATGCATGGTGGTGACCGTCCGTTTTCATTGTTTGAAGGAAAG
GCTGGGATGGCATATCTCCTTTTAGACATGGTTAACCCCTCAGAATCAAGGTTCCCCACCTATGAACTTTGAGTTCCAGC
ATCAATGTGTGTAGGCCCAGCGATCCGTCAGTCCAAACAGTCTATGTC--AAAAATGATCTTACATTTTGGGACGGAGGG
AGTACTTGTGTTCTTATCTACCCTGTAAAATGTACCTTAGTGCGGTTGA------TGTAAATTTTAGTGTTTCTGACTCT
GCAAACTTGGACCTTTGTAAAATATGTTTGTGAGGGGGTTCTGGTAATAATGCTCATCTTTGTGTTGAATAGTGCCTA--
---TTGAATGAAATGAGTACTTTGGGATGCAAATGATACCATGGCCAGCAGCCAGGGCGATTCCTTTGGGATGAAATGTG
GATGTG------GCCTTTCCTTGCTTAAACTTT-AAGATGTAGTCTTTTCTTTTAACAACGAGGAAGTGCTCCTTTTGAT
CCATGATCATGAACATTTGTATGTTCTCAACCTTGGCTCTCCACATTTCATTATTTCTAACGTACTTGTCTCAACCTTGA
CCATCCACATTTCATTATTTCTGAT-------------------------------------------------------
--------------------------GTAGTTGGAAAACACCTCTAACCTTGAAACTATTGCACATGTACTTTGGGATTC
ATATCTGACTGCTGACTGTGTGTTTGTTTGGCTTTTTTCGAGGGGGTCAATGGAAATA----------------------
------------------------------------------------------------ACGAAGAGTAGAGGGGACAA
CGGGTCGCCCTGTCGAAGACCACACCCATGGGCGATAGGGTTGTCGGCAATACCATTCAGCTGTAACAGGAGGAGAAGGT
GCATAGCAGTGTGGCGACCCAACCACGAAAGATGCTCGGGAATCCCCTACGCTAAAGTAGATCAAGGAGGAACTCCCATC
TCACCGAGTCAAGAGCCTTTCGGATGTCGACTTTCAAAAGTAGGGTGGGGGTCTTACACTTATGGAGTCGGCGCCTGAGG
TTCCTCACATACGCGAACTTATCGTGGATGCTTCTCGTCTTGATGAAAGCACTTTCGGCGTGGGAGACTAAGGTGCGCAT
ATGACGGGTAAGCCTGATGGCGAGAATTTTTGCAATAATTTTGGTCACCATGTGG
>chr4D_12
-----------TGGGAAGACTTGCGCACTAAATTGAGAGGGTACCACCCTTACTCCTGAGAAGGATGAGGTCATGTGGCG
ATTAGAGCCGTCCGGACAATTCTCCACAGGATCCTTGTATAAGGACATCTTCAAGTCCACGACTCCATGCGACTTGGCCA
AGTTGTGGGGAGCACGACTGCCATTCAAAATCAAGATCTTCTTGTGGCAAGTCGCCCGC--TAAAATCACAAGTGGGGAT
CAGGTGCAAAAACAGCATGGCC-GGGCGATGACAAATGCATCTGGTGTGGGGAGAGTGAAGACCGGGATCATATTCTATT
TCGATGCATTTTGGCTCGATTTATGTGGAGTGCAGTTTGTTCGGCAACGTGTTCTGCGTGGAACCCAAGCGGGTTCTCAG
ATTTTTACCGTCCTGCAGCAGCCACTACCGAGAGGGATAAGAGGATTACATGGCTAGGGTTTGGGGCGCTTGCGTGGTAT
CTTTGGACTACCCGAAAC-AAAGCATAGATAGAGGGAGTATTTATCAGGCATCCAGCTGATATGCTATATAAAATGGTGT
CTTTCTTACGGCTATGGAAGCTTCTGGCAAAGCAACGGGACAAAGGACTCGTGGAGGAGCTCGTCACAAGGGTGCGAGCC
ATATGCACTGAGCTACGACGATTGACATAGGGACACCACCGACATACC-TCTGCATGTCGCCCTTAGCAACCTCGAGAGC
GAACAATGTGTTAC-CCGCCTTTACTAGCGCTGCGCCGCTATGTATCCGCCTTCGGGCTTGTATCCTCCGTGTTCTTGTA
CTTTTC--GCTA-TGTCTTCTGTACCTTGGACCTG-GCCATTTGGCGGGCTTGTTGGATCAGTAAGGGTCTCAGTTTAAG
GCCGGGCAAG----------------------------------------------------------------------
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>chr3A_27
--------------------------ACTAAACTGAGAGGGCACCAGT-TTAGCCCTGACAGGGATGAGGTTGTATGGCG
TTTGGAGCCGTCAGGCTAATTTTCAACAGGCTCACTGTATAAGGAGATCTTTAACTCCACAACTCCATGCGACTTATCTG
GGCTGTGGGGAGCACGACTTCCGTCCAAAATCAAGATCTTCTTATGGCAAGCCGCCCGTAATAGAATCACGAGTGGGG-T
CAGGTGCAAAA-AGACATGGCCCGGGCAACGGCAAATGCATCTGGTGCGGGGAGTGCGAAGATCGGGATCATATTTTATT
TCGATGCATCATAGCTCAATTTGTGTGGAGTGGCGTACGTTCGGTGGTGGGCTCCTCTTGGAACCCCAGCGAGTTCTCAG
ATTTTTACCGGCTTGCATCAGCCACTACCGGGAGGGATAGGAGGATTACATGGCTAGGGTTTGGGGCGCTTGCTTGGTCT
CTTTGGACCATGAAAAAC-AAAGCATTGTTAGAAGGAGTATTTATTAGGCATCCCGCTGATATACTATACAAAATG----
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>chr3D_184
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------------------------CCAAAATCAAGATCTTTTTATGGCA-GCCGCCCACAATAGAATAACGAGTGGGGAT
CAGGTGCAAAAAAGACATGGCTCGGGCGACGGCAACTGCATCTGGTGCGGGGAGTGCGAAGACCAGGATCACATTTTATT
TCGATGCATCATGGCTCGATTTATGTGGAGTGTCCTACGCTCGGTAACGGGCTCCTCTTGGAACCCGAGCGGGTTCTCAG
ATTTCTACCGGCTTGCATCATGCACTACCGGGAGGGATAGGAGGATTACATGGCTAGGATTTCGGGCTATTGCTTGGTCA
CTTTGGACCACGAGAAAC-AAAGCATTGATAGAGGGAGTATTTATCAGACATCCGACTGATCTATTATACAAAATGGTGT
CTTTCTTGCAGTTATGGAAGTTACTGGCAAAACGATAGGACAAAGGACTCGTGCAGGAGCTCGTTAAAGGGGTGCGGGCA
AGATGCACTAAGCTTCGACGCTCGACATAGGGACATCACCGGCATGCCTTCTCCATGTCGCCCTTAGCTACCTGGAGAGC
TATCACAGTCACCATCCGCCTTTACTAGCGTTGCGCCTCTATGTATCCGCCTTCGGGCATGTATCCCT---TTTCTTCAT
GTTTTACAGCTA-TTTCTTTCCTACTGCTTGCTGTTGTCATTTGGCAGACTTGTTGGAATCGTAAGGGTCTCAGTTTAAG
GCTGGGCAAGCGCCTTTTTTTAAAGAAAAAACAT----------------------------------------------
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>chr5B_405
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-----TACCGGCTTGCATCATCCACTACCGGGAGGGATAGGAGGATTACATGGCTAGGATTTGGGGCTATTGCTTGGTCA
CTTTGGACCACGAGGAACGAAAGCATTGATAGAGGGAGTATTTGTCAGACATCCGGCTGATCTATTATACAAAATGGTAT
CTTTCTTGCAGCTATGAAAGTTACTCGCAAAACGACAGGACAAAGGAGTCAGGGAGGAGCTCGTCAAAGGGGTGCGGGCA
AGATGCACTGAACTTTGACGCTCGACATAGGGACATCACCGGCATGCCTTCTTCATGCCGCCCACAACTACCTTGACAGC
TATCACAGACACCCTCCACCTTTACTAGCGCTGCG------TGCATCCGCCTTCGGACATGTATCCCTCTTTTTTTTCCT
GTTTTAGAGCTACTTCCTTTTCTGTTGCTTACTATAGCCATTTGGCCAACTTGTTGGATTTGTAAGGGTCTCAGTTTAAG
GCCGG-CAAGCGCCTCTTTTCTAAAAAAAAACAT----------------------------------------------
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>chr1D_892
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-----------------------------ACATTGAAGCGGTGAGCAACTCCGGCATGCTCCAGAAGAAAGGGACAGCCG
GTACTCCACGTGTCGAAGCTCACC-ATAGACGTGCCAGCGTCGCCGAGGAACCCA---GCAGAAAAATATGGGAAATGGC
GATGACGAGAAGGTGGAAGGCCTCCACCACGCCCGGCAGCCCCCGCACGGCGAGTCTTCCTCTTCCTCCTCCTCCTCCTC
CCCCTCCTACCGACACGCCACGAAGCGCCGACGCGCGCACGGCGCCGCAGCAGCCATGGCCGACCGCTTCTTCCCCAACG
ACCTCCCCGACTTCGTCGCCGAGGCACCCGACGGCGGCGACCCTCCCGCCGCCGGGCTCCGCGGCCTGCTCTCGCTCCCC
TACCCCAGGCTCTCCGACCGGCTCCTCCGCGCCGCCCTCCGGCTCAAAGACAAGGCACGCCGTCTCTGCTTCACTGCCTG
TGTTGTGGTTTCATTTCGGGGCGCGCGCGCGCGAGGTGCTCGACTGATTGATTGTGCCCTGCAGGTCGTGCAAGAGACAT
GGACTAGGACGGGGGGCCATGTGACGGACTACACGCTCTACACGGGCGCGCTCGGGACGGCGCTCCTGCTGTTCAAGTCC
TTCCAGGTCACCGGCGACCGCCGTGATCTCAACCTCGCCAGCGAGATCGTCCAAGCCTGCGATGCCGCGTCGCTTGGCCT
GCCGTACGATGGCGACTCCTTCTCATTGTTTCAGTTTTGTAGTTGTTTTGGT-----TAGATTGTTCCGGTCGTTGTTAA
TTCATGTGAAATGGTCGCCTGGTTGCAAGGCGCAGGTTCTTGACTTTCATATGTGGGAGGGCCGGCGTCTGCGCTCTCGG
AGCAGTGATTGCAAAGCATTGCAATGATCAGTTGATGGAGACCAACTTTCTGAGCTCGTTTGATGAGGTGAAGCTTCTAT
TAAGCGTAATTTCGGTTCTTCAGTCTGTATGTTAAATTCTGTGCTATTTTGCTACATGGTTCTAGAGTCACGGATGGTAT
ACCTAATGTTGTTGACAGAGTTGTCTTACATTTGTGATCTTGTAGATAATTATCACAGAGAAAGTTCCAAATGAGCTGCT
GTATGGAAGGGCGGGTTATTTGTGGGCTTGTTTGTTCCTGAATGAGCATCTCAGTGACAAGACAATTCCTGCCGAACACA
TTGTATGTTGACACTGTGATTCTGTTCCTCTTTTCACATTATTTGTTTCTGTAGAACAATGTGAAAGGTACAACTTATCT
AATCATGCAAAACCGCTGCAATGAGGCAGAGTTCTGTGGCAAAGGACATAATTATGGAGGGAAGGAAGCTGTCGAACAAG
GGGAGCTGCCCGCTGATGTATGAGTGGCATGGGAAGAAGTACTGGGGTGCTGCCCATGGACTCGCTGGAATCATGCATGT
TCTCATGCACACTGAATTGAAGCTGGATGAGCAGGATGACGTGAAGAATACTCTGCGGTACATGATCAGTAACCGGTTTC
CAAGTGGAAACTACCCCTCGAGTGAAGACAGCGAATCCGATCGCCTGGTGCATTGGTGCCATGGTGCCCCTGGTGTTGCT
CTTGCACTTGCTAAGGCATATCAGGTATTGCTGCATCTGTATAGAGTTAGTCTATAGGATCTTCCTGAGTATGTATGCAT
CTTATTCACACCACTTATGCATACCCGTCTGGGAAGTTGTGCATGCATCTCCACATAGGCAAGTTTGTTCAGGCCTCAGC
AGGAGTTTTTACTGACGACCAATTAGGCTTTGGCACAAGTTTTAGCTATGACTAATGAGCAGCCAAGCAATAGTGTTCTA
TTAACTAAACTTTCCCTTTGATCACAGTGATGAGCTAACCGTTTGTGTTTCAGGTCTTCCAAGATGATCACTTCAAGCAG
TCCGCTGCAGAGGCTGCTGAAGTTGTCTGGAACCGTGGTCTTCTCAAGCGAGTTGGAATATGCCACGGTATAAGCGGGAA
TGCCTATGTATTCCTCTCACTTTATAGGCTAACCGGCAATGTTGAGTACCTCTACCGGGCTAAGGCTTTTGCTTGCTTTC
TGCTTGAAAATGCTGATCGATTGATTGCTGAGGAGGCCATGCATGGTGGTGACCGTCCGTTTTCATTGTTTGAAGGAAAG
GCTGGGATGGCGTATCTCCTTTTAGACATGGTTAACCCCTCGGAATCAAGGTTCCCCGCCTATGAACTTTGAGTCCCAGC
ATCAATGTATGTAGGCCCAGCGATCCGTCAGTCCAAACAATCTGTGTC--AAAAATGATCTTACATTTTGGGACGGAGAG
AGTACTTGTGTTCTTATCTACCCTGTAAAATGTACCTTAGTGCGGTTGATATCCTTGTAAATTTTAGTGTTTCTGACTCT
GCAAACTTGCACCTTTGTAAAATATGTTTGTGAGGGGGTTCTGGTAATAATGCTCATCTTTGTGTTGAATAGTGCCTA--
---TTGAATGAAATGAGTACTTTGGGATGCAAATGATACCATGGCCAGCAGCCAGGGCGATTCCTTTGGGATGAAATGTG
GATGTA------GCCTTTCCTTGCTTAAACTTT-AAGATGTAGTCTTTTCTTTTAACAACGAGGAAGTGCTCTTTTTGAC
CCATGATCATGAACATTTTTATGTTCTCAACCTTGGCTCTCCACATTTCATTATTTCTAACGTACTTGTCTCAACCTTGA
CCATCCACATTTCATTATTTCTGAT-------------------------------------------------------
--------------------------GTAGTTGGAAAACACCTCTAACCTTGAAACTATTGCACATGTACTTTGGGATTC
ATATCTGACTGCTGACTGTGTGTTTGTTTGGCTTTTTTGGAGGGGGTCAATGGAA----CGAAGAGTAGAGGGGACAACG
GGTCGCCCTGTCGAAGACCACACCCATGGGCGATAGGGTTGTCGGCAATACCATTCAGCTACGAAGAGTAGAGGGGACAA
CGGGTCGCCCTGTCGAAGACCACACCCATGGGCGATAGGGTTGTCGGCAATACCATTCAGCTGTACCAGGAAGAGGAGGT
GCATAGCAGTGTGGAGACCCAACCATGAAAGATGCTCGGGAATCCCCTACGCTAAAGTAGATCAAGGAGGAACTCCCATC
TCACCGAGTCAAGAGCCTTTCGGATGTCGACCTTCAAAAGTAGGGTGGGGGTCTTGCACTTATGGAGCCGGCGCATGAGG
TTCCTCACATACGCGAACTTATCGTGGATGCTTCTCGTCTTGATGAAAGCACTTTCGGCGTGGGAGACTAAGGTGCGCAT
ATGACGGGTAAGCCTGATGGTGAGAATTTTCGCAATAATTTTGGTCACCATGTGG
>chr1A_892
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-----------------------------ACATTGAAGCGGTGAGCAGCTCCAA---GCTCTAGAAGAAAGGGACAGCAG
GTACTCCACGTGTGCAAGCTCACC-ACAGACGTGCCAGCCTCGCCGAGGAACCCA---GCAGAAAAATATGGGAAATGGC
GACGAGGAGAAGGTGGAAGGCCTCCACCACGCTCGGCAGCCCCCGCACGGCGAGTCTTC------------CTCCTCATC
CCCTTCCTCCCGCCACGCCACGAAGCGCCGACGCGCGCACGGCGCGGCAGCAGCCATGGCCGACCGCTTCTTCCCCAACG
ACCTCCCCGACTTCGTCGCCGAGGCACCCGACGGCGGCGACCCTCCCGCCGCCGGGCTCCGCGGCCTGCTCTCTCTCCCT
TACCCCAGGCTCTCCGACCGGCTCCTCCGCGCCGCGCTCCGGCTCAAAGACAAGGCACGCCGTCTTTGCTTCATTTCTTG
TGTTGTGGTTTCATTTCGGGGCGCGCGCGCGCGAGGTGCTCGACTGATTGATCGTGTCCTGCAGGTCGTGCAAGAGACAT
GGACTAGGACGGGGGGCCAGGTGACGGACTACACGCTCTACACGGGCGCGCTCGGGACGGCGCTCCTGCTGTTCAAGTCC
TTCCAGGTCACCGGCGACCGCCGTGATCTCAACCTCGCCAGCGACATCGTCCAAGCCTGCGATGCCGCGTCGCTTGGCCT
ACCGTACGATGGCGAC----TCTCATTGTTTCCGTTTTGTAGTTTTGTTTGGTTAGATAGATTGTTCTGGTCGTTGTTAA
TTCATGTGAAATGATCGCCTGGTTGCAAGGCGCAGGTTCTTGACTTTCATATGTGGGAGGGCCGGTGTCTGCGCTCTCGG
AGCAGTGATCGCGAAGCATTGCAATGATCAGTTGATGGAGACCAACTTTCTGAGCTCGTTTGATGAGGTGAAGCCTCTAT
TAAGCGTAATTTCGGTTCTTGAGTCTGTATGTTAAATTCTGTGCTATTTTGCTACATGGTTGTAGAACCACGGATGGTAT
ACCTAATGTTGTTGACAGAGTTGTCTTACATTTGTGATCTTGTAGATAATTATCACAGAGAAAGTTCCAAATGAGCTGCT
GTATGGAAGGGCGGGCTATTTGTGGGCTTGTTTGTTCCTGAATGAGCATCTCAGTGACAAGACAATTCCTGCCGAACACA
TTGTATGTTGACACTGTGATTCTGTTCCTCTTTTCACGTTATTTGTTTCTGTAGAACAATGTGAAAGGTACATCTTATCT
AATCATGCAAAACCGCTGCAATGAGGCAGAGTTCTGTAGCAAAGGACATAATTAGGGAGGGAAGGAAGCTGTCGAACAAG
GGGAGCTGCCCGCTGATGTATGAGTGGCATGGGAAGAAGTACTGGGGTGCTGCCCATGGACTTGCTGGAATCATGCATGT
TCTCATGCACACTGAATTGAAGCTGGATGAGCAGGATGACGTGAAGAATACTCTGCAGTACATGATCAGTAACCGGTTTC
CAAGTGGAAACTACCCCTCGAGTGAAGACAGTGAATCCGATCGCCTGGTGCATTGGTGCCATGGTGCCCCTGGTGTTGCT
CTTACACTCGCTAAGGCATATCAGGTATTGCTGCATCTGTATAGAGTTAGTCTATAGGATCTTCCTGAGTATGTATGCAT
CTTATTCACACCACATATGTATACCCATCTGGGAAGTTGTGCATGCATCTCCACATAGGCAAGTTTGTTCAGGCCTCAGC
AGGAGTTTTTACTGACGACCAATTAGGCTTTGGCACAAGTTTTAGCTATGACTGATGAGCAGCCAAGTAGTAGTGTTCTA
---ACTTAACTTTCCCTTTGATCACAATGATGAGCTAACCGTTTGTGTTTCAGGTCTTCCAAGATGATCACTTCAAGCAG
TCCGCTGCAGAGGCTGCTGAAGTTGTCTGGAACCGTGGTCTTCTCAAGCGAGTTGGAATATGCCACGGTATAAGCGGGAA
TGCCTACGTATTCCTCTCACTTTATAGGCTAACTGGCAATGTTGAGTACCTCTACCGGGCTAAGGCTTTTGCTTGCTTTC
TGCTTGAAAATGCTGATCGATTGATTGCTGAGGAGGCCATGCATGGTGGTGACCGTCCGTTTTCATTGTTTGAAGGAAAG
GCTGGGATGGCATATCTCCTTTTAGACATGGTTAACCCCTCGGAATCAAGGTTCCCCGCCTACGAACTTTGAGTTCCAGC
ATCAATGTATGTAGGCCCAGCGATCCGTCAGTGCAAACAATCTGTGTCAAAAAAATGATCTTACATTTTGGGACGGAGGG
AGTACTTGTGTTCTTATCTACCCTGTAAAAT-TACCTTAGTGCGGTTGATATCCTTGTAAATTTTAGTGTTTCTGACTCT
GCAAACTTGGACCTTTGTAAAATATGCTTGTGAGGGGGTTCTGGTAATAATGCTCATCTTTGTGTTGAATAGTGCCTATG
ACCTTGAATAAAATGAGTGCTTTGGGATGCAAATGATATCATGGCCAGCAGCCAGGGCGATTCCTTTGGGATGAAATGTG
GATGTAGCCTTTGCCTTTCCTTGCTTAAACTTTTAAGATGCAGTCTTTTCTTTTAACAACGAGGAAGTAGTCTTTTTGAC
CCATGCTCATGAACATTTGTATGTTCTCAACCTTGGCCCTCCACATTTCATTATTTCTAATGTACTCCCTCCGTCCGGAA
ATATTTGTCATCAAAATGGATAAAAAGGGGTGTATCTAGAACTAAAATACATCTAGATACATCCCCTTTTATTCATCTTG
ATGACAAGTATTCTCGGACGGAGAGAGTACTTGGAAAACACCTCTAACCTTGAAACTATTGCACATGTACTTTGGAGTTC
ATATCTGATTGCTGACTTTG----TGTTTGGCTTTCTTGGAATGGGTCAATGGAAATAGCGAAGAGTAGAGGGGACAACG
GGTCACCCTGTCGAAGACCACACCCATGGGCGATAGGATTGCCAGCAATACCATTCAGCCGTAAC---------------
----------------------------------------------------------------------AAGAGGAGGT
GCATGT-AGTGCGGAGACCCAATCACGAAATATGCTTGGGAATCCCCTCTGCTGAAGGGGATCAAGGAGGTACCCCCACC
TCACCGTGTCAAAAGCCTTTCAAATGTCGAGCTTCAAAAGTAGGGTGGGGGTGTTGCACATATGG---------------
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>SNPs
SSSSSSSSSSS--S------S-SS-----------------------------------S--------------------
----------S-------------------S--S--------------S-S--------------------------S--
----------------SS------------------------S-------------------------------S-----
-----------------------S--S--------------------------S--------------------------
--S--------S-----------------S-------------S-------------------------S------S---
----------------------------------------------------------------------------S---
---------------------------S-------------------------S----------------------S---
------------SS-----------------------------------------------------------S------
-----------------------S--------------SS------------S---------------------S-----
--S-----------------------------S----S--------SS----S------------------S---S----
----SS-SSSSSSS----------------S-S------S-----------------------S---------S------
-S---------S-----------------------------------------S-----S---S-----------S----
------------------------S---S---------------------SSSSSSSS----------------------
-----------------------------------------------------------S--------------------
------------------------------------S-------------------------------------------
--------------------------------S-----------------------------------------------
---------S---------------------------------------------------S------------------
----------S---------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------------------------S--------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
----S-------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-S-----------S-----------------------S------------------------------------------
------------------------------------------SS----SS-------------SS----SSS----S---
----------S-------S-------------------------------------------------------------
-----------------------------------------S------------------------------------S-
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------S---------------S----------------------
--------S------------------------------S---S------------------------------------
--------------------------------------------------------------------------------
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-----S------------------------------------------------------------------S------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-----S---S----
--------------S-----------------------------------------------------------------
-------------------------------S-----------------------S-----------S------S-----
--------------------------------------------------------------------------------
--------------------S---------S------------------------
>forward_792
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TCCGGGCTTGTATCCCTGTA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2414
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCCCTCGAGTGAAGACAGTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_956
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGCTCCATGCCCTAAAGACG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_2788
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------CCACTTCAAGCAG
TCCGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_989
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GTGTCCAAGCTCACCCACAT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_3129
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GTGTAGGCCCAGCGATCC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
