>input_sequence_38458
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---ATGGAGGAGGAGCACAGCGGCGGGGTGCGGCGGAGGTGGCTCGTCGACGTCGCCCGCTGGCGCCCCTCCCCGACGCA
GTTCCAAGCCGCGGCTGCCCTCCTGCCGCCGCACCACCGCCATGCCATCGCCAGGTAAACTCTTCCACCAGTTTAACT-C
CCCCCATGCTTCCTTGCCCTCTTAACTATGCCCTTCGGAGATGGATAAG--AAAAACGCATGGAATTGGTAGGGTTGAAT
TCGAATCAAAACCCCTAACTATGCCCTTCGGGGATTGATC-----------------CCAACTCGCTGGGGCAGGTTCGT
CAAGGAGGAAGACAGGAAACGAGCGCTCATCAGCCGGCTGCTCCAGCACTCGCTTGTGCACCGTGTTCTTGGCATCCCAT
TCCACCAAATTCACATATGCCGAACAACTGAAGGGAAGCCGTATCTGGTACTGCAGCCTGTTCAATCAATTTCATTCCGA
CGTCACTACACCAACTCTTTACCCTTTACTCATAA-CAAGTACATCAACAGATGAAATGAGCATTTGTTAGGTCAAATAG
CTTCTGCAATCAATGGATCATCCTCTGATTAAGTTATATGCCCTTGTTATTCTTGCAGAAGAATAGCCCTCCGGCCTTCA
GAAACTTTAATTTCAACACATCGCATCAGGGTGACTACGTAGGCATAGCATCAGAGCTGCTTTGCCTTGTTGGCCTTGAT
ATTGTGTGTATCTCTAAGCCTCAGGGAGAAACCACCGTGGAATTCCTTAAGAATTTCTCTTCATACCTCACAGACCATGA
GTGGAACTGCATTGGTCGCGCTGCCGGTTCCATTGAGATGTTATCAGAGTTCTACAGGTAATTATTTGTTGGGAGCTTTC
TACTCCCTCGGTCCCATAATGTAAGAGCGTTTTTGACACTTAGACAATAATGTAGAGAGAATCAGCATTCAGAGA-----
----------------------------------------ACTATGAGCTAGTTCTAGAACCACCACGAAAACAGCATAA
GAAAAGAGTAGTAGATCGA---TACTACTTATGAATTTCTGCTGAAACCTAACCAAAGTACCTGTACTCCCATACCCTAA
AAGCTATCATTACTGCACGCAAGTTCATAGACGCCATAGTGTTTAACAACCCATTCAGCTGCATGGAACTTGAGTCCTAG
TTTTTAATATTTTAGCAT-AACAAATCTCTGGGTTTTGCCAACAATGTTAAAGGAGATT--TTTTAATAAAATGAATAGT
TTAA----TTTGAAATAAGTACACTTCAAACCCTACCAAGGATGTGGT---TCTGGTTTTGCAAGAAGTGTATGTTAGCA
GCTATTTTCGTTGAGATCGTCTTCATGCTTTTGATGATCTGCATAGTATAAATTGTTCAACCTTTTTTTTTTTTGAAGAA
ACACACCCAAAGTGT-ATCTTAGATTTGATAATTATCAAGGAAAACAACAAGTACATTACATTGAAAAACATACTAGCCT
TCTTCTTCC---GATTGATTGCCGCCCACCAGCCACCGGAGATTGAAAATCGCACTGAACCAACAGTAAAGAAGAGAGAC
ACTTGCAAATGCCCTTGCCATACCAGGCTTTAAATTGTTGGTCTTTTGTAGGTACTGGTGTCTCAAAGAAGCATTTGTTA
AAGCTGTAGGCGCTGGGGTTGGATTTGGGCTGCATCGCTTGGAATTCCACCATGTTGAATGGAGTAACATCTCTGTCTAC
ATTGACGGGATAGAGTCTAGGAAATGGAGGTTCTGCCTTTTCAAGCTTGATGAAATACATTTGGTATGTGTGGATT-GTT
CACATCATATACTTTGCACAGATAGAAATCCAATTCAAAATCGATCTGGTGATATAAATCTGCTGTATGTTTTTTACAAA
GCATAGAGAAGGGATATGCTCTTGCAGGTTAGTTCTTGTGACAGGTTACTTACTTACCATTACAAATGCAATTGCAGGCG
TCCATAGCGAAAGGGCATCCGGAGGATGCTATACACAGCTTCAAGACAACATTGTCTAATGTGGTTGTTGAGGATGAAGA
ATTTTATGCTGCACTAGAGATCCCAGAAGAAACTGTCACGCTACAGACAGTGGAGCAACTTACACAATTATAA-------
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>chr4B_1_TraesCS4B01G130400
CTCGGAGGGCACTGTTATCCTAAACGATACGACGATAAAATAGGTGCTGGGGTGCCCTCCTTTATATATAGCATTGTATA
TGACGTGGAACCTAACCATATTAGTAATTAGGCCCCCAATCATAGGCGCAAATTGTTAATTACCATTAATTAGTGTTAAT
CCTGTAATTAACTAATGGGCCCACTTTGACTTAGGGTAATTAACATATTAACCATTCAATTACTTAATATTTTTACAGGA
TTTGCATCAATGTTTTAAATAACGAGCTATGGAAAATAGTGACGCGCTTTTAAATCAGTTATAGCGCGCTATTTATGAAG
GTAATCATTTAGCGGCACCATGCTGAAAAGGCTATAGCGGGCTATAACGGAGCTATAGCCGGCTATTTAAAACTATGATT
TGCATGCAGACATATTTCTTTACAGAGGGAGTATGATGCAAGCCACCAGCAGCACACACATATACTACTGTCTATCAGAG
GTTCTCGAACAAATTATTGGGTTCACTTAGATTTTAGACCCAATCCTCATGCATTGGCTCTG--------TCGACCCAGT
GGCCGAAGATGTAATTGGCGTGC---------------------------------------------------------
-------AGACAACACATACAATAATTTGTTTGTAGACAGCCTAACTTTAGCATCACACTAGACGGTAATTCGATATCCG
ATACACCAATTCATCAGAAGGAGATGATTCTAGTCCAGGGTTCT-------------------------AGAGGAAGAAG
GAGAGAGGCACACGCAGGTGCAGAGAGAA-------AGAAAAAAGAGATGCCTGTTCTTGGACGCCT-------------
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------------------------------CCTTCAGAGCTGCCCCCCTCATCAAA---GTAGCTGACCGTTGCGTACAG
TACATGG-----------------------------------------GCCTAGTCCTTCCTGACGGGCCTCCAGCTTCT
TCTCAGGGGTTCGGCACCGGTTGGTGGTGGGCCCTGCTTGTC--------------------------------------
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-----------------GGTAGCAGACTTGGTCGGGCCGGCGGA---------------------------CGCCGGCGA
GGCGTCCTGGCCCCGGCTTGTTGCTCCAAGCACGCCCCGGCCCCGCCATCTCACCTTGGA----------AGAAAGGAAT
GAGATGGAGGAGGAGCACAGCGGCGGGGTGCGGCGGAGGTGGCTCGTCGACGTCGCCCGCTGGCGCCCCTCCCCGACGCA
GTTCCAAGCCGCGGCTGCCCTCCTGCCGCCGCACCACCGCCATGCCATCGCCAGGTAAACTCTTCCACCAGTTTAACT-C
CCCCCATGCTTCCTTGCCCTCTTAACTATGCCCTTCGGAGATGGATAAG--AAAAACGCATGGAATTGGTAGGGTTGAAT
TCGAATCAAAACCCCTAACTATGCCCTTCGGGGATTGATC-----------------CCAACTCGCTGGGGCAGGTTCGT
CAAGGAGGAAGACAGGAAACGAGCGCTCATCAGCCGGCTGCTCCAGCACTCGCTTGTGCACCGTGTTCTTGGCATCCCAT
TCCACCAAATTCACATATGCCGAACAACTGAAGGGAAGCCGTATCTGGTACTGCAGCCTGTTCAATCAATTTCATTCCGA
CGTCACTACACCAACTCTTTACCCTTTACTCATAA-CAAGTACATCAACAGATGAAATGAGCATTTGTTAGGTCAAATAG
CTTCTGCAATCAATGGATCATCCTCTGATTAAGTTATATGCCCTTGTTATTCTTGCAGAAGAATAGCCCTCCGGCCTTCA
GAAACTTTAATTTCAACACATCGCATCAGGGTGACTACGTAGGCATAGCATCAGAGCTGCTTTGCCTTGTTGGCCTTGAT
ATTGTGTGTATCTCTAAGCCTCAGGGAGAAACCACCGTGGAATTCCTTAAGAATTTCTCTTCATACCTCACAGACCATGA
GTGGAACTGCATTGGTCGCGCTGCCGGTTCCATTGAGATGTTATCAGAGTTCTACAGGTAATTATTTGTTGGGAGCTTTC
TACTCCCTCGGTCCCATAATGTAAGAGCGTTTTTGACACTTAGACAATAATGTAGAGAGAATCAGCATTCAGAGA-----
----------------------------------------ACTATGAGCTAGTTCTAGAACCACCACGAAAACAGCATAA
GAAAAGAGTAGTAGATCGA---TACTACTTATGAATTTCTGCTGAAACCTAACCAAAGTACCTGTACTCCCATACCCTAA
AAGCTATCATTACTGCACGCAAGTTCATAGACGCCATAGTGTTTAACAACCCATTCAGCTGCATGGAACTTGAGTCCTAG
TTTTTAATATTTTAGCAT-AACAAATCTCTGGGTTTTGCCAACAATGTTAAAGGAGATT--TTTTAATAAAATGAATAGT
TTAA----TTTGAAATAAGTACACTTCAAACCCTACCAAGGATGTGGT---TCTGGTTTTGCAAGAAGTGTATGTTAGCA
GCTATTTTCGTTGAGATCGTCTTCATGCTTTTGATGATCTGCATAGTATAAATTGTTCAACCTTTTTTTTTTTTGAAGAA
ACACACCCAAAGTGT-ATCTTAGATTTGATAATTATCAAGGAAAACAACAAGTACATTACATTGAAAAACATACTAGCCT
TCTTCTTCC---GATTGATTGCCGCCCACCAGCCACCGGAGATTGAAAATCGCACTGAACCAACAGTAAAGAAGAGAGAC
ACTTGCAAATGCCCTTGCCATACCAGGCTTTAAATTGTTGGTCTTTTGTAGGTACTGGTGTCTCAAAGAAGCATTTGTTA
AAGCTGTAGGCGCTGGGGTTGGATTTGGGCTGCATCGCTTGGAATTCCACCATGTTGAATGGAGTAACATCTCTGTCTAC
ATTGACGGGATAGAGTCTAGGAAATGGAGGTTCTGCCTTTTCAAGCTTGATGAAATACATTTGGTATGTGTGGATT-GTT
CACATCATATACTTTGCACAGATAGAAATCCAATTCAAAATCGATCTGGTGATATAAATCTGCTGTATGTTTTTTACAAA
GCATAGAGAAGGGATATGCTCTTGCAGGTTAGTTCTTGTGACAGGTTACTTACTTACCATTACAAATGCAATTGCAGGCG
TCCATAGCGAAAGGGCATCCGGAGGATGCTATACACAGCTTCAAGACAACATTGTCTAATGTGGTTGTTGAGGATGAAGA
ATTTTATGCTGCACTAGAGATCCCAGAAGAAACTGTCACGCTACAGACAGTGGAGCAACTTACACAATTATAATCTTAGC
TAGCTAGCTTTCCAAAATAGTGCAGTAACATACGGGTGCAGGATTATATCAAGAGATGAAATGCCTCAGGCTTATTGATT
CCCAATTGCATACTACTGCAGGATTTGAATCAAGAGATGAGATATATACTTGAAGAAGGTATCAAATAAGTTGATTGCAT
CGAAGTGATGAA---------------------------AAAAATCCTG-GAAACTAGGAAGATAGATGTATGCCTGGTA
AATGTAAGCCAATTTTGATTCAGAACAAGGAGGCATGATCTGTGCTCAGAGC-TTTGCGCAGAATGATTTATAAGGATCA
TTTTTTTTTTAAAATGGCAAAAGGGGAACACAATTTTGGAAGGGTTTACAAGCTGTAAAATTTTGGTTTAGGTTGAGAGC
TGCATATACTTTAGG--------CAAGTTATCCCATACGAAATTTGGCAAG---GTGTCTAGTCAGTTCTCAACATAAGC
ACTGT---ATACAGCTAGTATCTTATTTGTGGTTTCAGAGGCCTGTCAAGGTTGAAACATTCTGTATGGCTGCTTCCAGA
TGATAGGATACAGCCATCTG-------AGGCGTGGAGGATTATACTCTGTAAATTATGTAGAGCTGTTGAATAATCAGAA
TACTG---AATGATTTAGTTTCCTTTT-GCTCAAATTTCGTTGGCGTGTATACAGATTTTTCGATAAGGGGCACTTTATT
ACTTAAAAAGGTTTATAAGTATTACAGATGGCCTCTGCATAGTGAATAAAATGTTGGACCGACTCCTTTATGCAT-ATAA
GGGCTGTAGGCCTGCAGAACGACATATTTTATTTTTGAAG-TAATTGTGAATTTGTAA-GATGATCACCCCAAGTGCAAC
CGCAACATTTTATC-AAAGCAATTTGAAGTCACTTCCATAATGTGCATTTATCTTCGAAAAATAATGGACATACACTCGA
AGAATTGTAATAATTAGTTAGTATCAAAATGCGGCGTGTTAGATGTGTATAGTCTATTTTCTGTATATCCCCATTGTATA
TGGGCTTCTTA
>chr4D_457
CACACAC-------------------------------------------------------------------------
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---------------------------------------------------------------ACTACTGTCTATCAGAG
GTTTTCGAACAGATTATTGGGTTCACTTAGATTTTAGACCCAATTCTCGTGCATTGGCTCTGCAACTGTGTCCACCCAGT
GGCCGAAGATGTATTTTAGTTGTAGATACATCCATTTTTGTGACAAGTAATTCCGAACGAAGGGAGTAGTTTCTACTACA
ATATACTAGACAACACATACAATAATTTGTTTATAGACAGTCTAACTTTAGCATCACACTAGACGGTAATTCGAGATCCG
ATGCACTAATTCATCAGAAGGAGATGATTCTAGTCTAGGGTTCT-------------------------AG--GAGGAAG
GAGAGAGGCACACGCAGGTGCAGAGAGAC-------AGAGAAAAGAGATATCTGTTCTTGGACACCTCCTTCAGAGGGTG
GATCCTATATGACGCTCGTTAGCGTCCAAACGTCGTGCCTTCGCTGAGGCTAGCGTCTGGTTGGGCCGGCCCACGTGCGG
GATTCACCTGTTTATCCGTTCCCTGCTGCTTTCCCTCGCTGTTTCGTGTTTTTATTTCGTTTTTCTTCTGTGCTGTTTTT
GCTTCCGGTTTTTCACTGTTTTGTCCGGTTTTCAGTGATTTCTTATGTTTTTTTTGTTCCCTTTTACCTTTTCATTTATT
TTCTTATTTTCTTTTTTCTTCTCATTTTTTGGTATTATATAAAAAGTTCACTGTGTATTACAAAAAAATGTTCATCGTAT
ATTAAGGAAATGTTCAACATATATTGCAAAAAAGTTCACCTTGCGTTTATAAAAATGTTCATTGTGTATTACAAAAAAAA
TTAATCACACATTTAACAAAATGTTCACCATATACTAGGAAAATGTTCAACGTATTTATAACAATGTTCATTGTGTACTT
ACAAAATGTTCAGCATATATCACAAAAATGTTCAATGTGTTTTTAAGAATTGTTGAGCATATATCACGAAAATGTTTAAT
GATCAAAACATTTGATTTTTTTTCTTCCGCTGCTCTTAGTTCTTATAAATTCGCGCGGCGTATACACAGCAAACAGTGAG
CAGCTCAAGTGGTATTGGACACTTGCCCACTACCGTGGGGTGTCGAGTTCGATTCCTCGATGCCGCATCTTTTTTTTTGG
GATTAATAGCAGCTCGTTTTGACGCCACTGAATGGGCCGGCCCATTCTGATCGTGCGCCTGCGCGGAAGCTCGTGTGGTT
GACGCTCGCGAGCGTCAACTAGGAGCTCTCCCTTCAGAGCTGCCCCCCTCATCAAAAAAGTAGCTGACCGTTGCGTACAT
GGGCCTTTGAGGTTTTTTTTTTAGGGCTACATGGGCCTTTGATTGTGTGCCTAGTCCTTCCTGACGGGCCTCCAGCTTCT
TCTCAGGGGTTCGGCACCGGTTGGTGGTGGGCCCTGCTTGTAGAGTCCTCCTCGTTGGCGCCTTATGCGCCGCTTTCGGC
TGCTGGCGCTCACGTCCCAGCTCACTTGGGCCGGCCCATTTAGCTGGATCGATCATTCCTCTTCTTCGATCGCTCTACAG
ACAGAAAACTCTATCGTCCGATTCAATTAACACGTTGATCGTTCAATTCAGTTGACCATTAAACTTTTGACCGCTTTGCA
GTTGACCGTGTTGACTTTTCAAAAAAATCATCACATTTGAAAAAGAATTCCTCAATTTGAGAAAGTTCATTGATTTTAAG
GAAAGTTCATCAAATTTGGAAAAAAGTTCACAAAATTTAAGAAGTTCATCGATTTGAAAAAATAGTTCATCAATTTTGAA
AAAAGTTCATCGAATTTGAAGAAAAGTTCATTGAATTTGAAAAAAATCATTAAATTTGGAAAAAGTTCATCAAATTTGGT
AAAAAGTTCATCGAATTTGGAAAATGTTCATCGATTTGAAAAAGTTCGTCAAATTTGATAAAAGTTCATCGATTTTGAAT
AATAATTTCACAAATTTGAAAAAAGTTCACGGAACCTAGGAAGAAAAAATGAAAAATGAAAATAGAAAAACGAACACAGA
AGAAAAAAAGAAAGAAGAAAAAAATATTTAAAAGTTTGCATGTCAGTTGGGGATGGCGGGGTGGTTACCGTGGTTTACTA
TTAAGCAGGTCGTCCCGAGTTCGATTCTCAGTACAATCTGAGTTTTTTTGCGAATTGATAAACACAGAGTAAAAGAGCTA
GATGGGCCGGCCCAGCGGAGAAGGGGGGTATGCGCCCGTTTGCGTATTGCACTGTAGCGGGCGCAGAGGGCGCCGAATAG
GATTCAGCCTGCTTGTAGGTGGGAGACTTTGTCGTCGCACTCCACTTGTCTAGAGGTGGGGGTGCCGGCGGCGCCGGCGA
GGCGTCCTGGCCCC------------------CGCCCCGGCCCCGCCATCTCACCTTGGGAGAAGTTACCAGAAAGGAAT
GAGATGGAGGAGGAGCACAGCGGCGGGGTGCGGCGGAGGTGGCTCGTCGACGTCGCCCGCTGGAGCCCCTCCCCGACGCA
GTTCCAAGCCGCGGCTGCCCTCCTGCCGCCGCACCACCGCCATGCCATCGCCAGGTAAACTCTCCCACCAATTTAACT-C
CCCCCATGCTTCCTTGCCCTCTTAACTATGCCCTTCGGAGATCGATAAG--AAAAACCCATGGAATTGCTAGGGTTGAAT
TCGAATCAAAACCCTTAACCATGCCCTTCGGAGATTCATCTTG------------------CTCGCTGGTGCAGGTTTGT
CAAGGAGGAAGACAGGAAACGAGCGCTCCTCAGCCGGCTGCTCCAGTACTCGCTTGTGCACCGTGTTCTTGGCATCCCAT
TCCACCAAATTCACATATACCGAACAACTGAAGGGAAGCCGTATCTGGTACTGCAGCCTGTTCAATCAATTTCATTCCGA
AGTCACTACAACAACTCTTTACCCTTTATTTACTCTCAACTACATCACCGGATGAAATGAGCATTTGTTAGGTCGAATAG
CTTCTGCAATCAATGGATCACCCTCTGATTAAGTTGTATACCCCTGTCATTCTTGCAGGAGAATGGCCCTCCGGCCTTCA
AAAACTTCAATTTCAACACGTCGCATCAGGGTGACTACGTCGGCATAGCATCAGAGCTGCTTTGCCTTGTTGGCCTTGAT
ATTGTGTGTATCTCTAAGCCTCAGGGAGAAACCACCGTGGAATTCCTTAAGAACTTCTCTTCGTACCTCACTGGCCATGA
GTGGAACTGCATTGGTCGCGCTGCCGGCTCCATTGAGATGTTAACAGAGTTCTACAGGTAATTATTTGTTGGGAGCTTTC
TAA-------------------------------------TAGACAATAATGTATACATAATGAGCATTCGGAGATGTGG
TTGAGCGTCAGAACCTCTACCCTAAAGGATAATTCAGAGGACTATGAGCTAGTTCTAGAATCACCATGAAAACAGCACAA
GAAAAGAGTAGTAGATCGATGCTACTACTTATGAATTTCTGCTGAAACCTAACCAA-GTACCTGTACTCCCATGTACTAA
AGCTTATCATTACTGCATGCAAGTTCATAGACGCCGCAGTGTTTAACAACCCATTCAGCTGCATGGGGCTTGAGTCCTAA
TTTTTAATATTTTAGCAT-AACAAATCTCTGAGTTTTGCCAACAACGTGAAAGGAGATT--TTTCTTTACTGGTGTTTTT
A-AA----TTTGAAATAAGTACGCTTCAAACCCTACCAAGGATGTGGTTGTTCTGCTGTTGTAAGAAGTGTATGTTAACA
GCTATGTTAGTTGAGATCATCTTCATGCTTTTGATGATCTGCATAGTATAAATTGTTCGTC---TTTTTTTTTTGAAGAA
AGACACCCAAAGTGCCATCTTTGATTTGATAATTATCAATGAAAACAACCAGTACATTACATTGAAAAACATACTGGCCT
TCTTCTTCCTTCGATTGATTGCCGCCCGTCGGAGATTG--------AAATCGCACTGAGTCAACAGTAAAGAAAAGGGAC
ACCTGCAAATGCCCTCGCCATACCAGGCTTTAAATTGTTCGTCTTTTGTAGGTACTGGTGTCTCAAAGAAGCATTTGTTA
AAGCTGTAGGCGCTGGTGTTGGATTTGGGCTGCATCGCTTGGAATTCCACCATGTTGAATGGAGTAACATCTCTGTCTAC
ATTGACGGGATAGAGTCTAGGAAATGGAGGTTCTGCCTTTTCAAGCTTGATGAAATGCATTTGGTATGTATGGATT-GTT
CACATCATATACTTTGCACAGATAGAAATCCAATTCAAAAT------------------CTTTTATATGTTTTTTACAAA
GCGTAGAGAAGGGATATGCTCTTGCAGGTTAGTTCTTGTGACAGGTTACTTACTTACCATTACAAATGCAATTGCAGGCG
TCCATAGCGAAAGGGCATCCGGAGGATGCTATACACAGCTTCAAGACAACGTTGTCTAATGTGGTTGTTGAGGAAGAAGA
ATTTTATGCTGCACTAGAGATCCCAGAAGAAACTTTCACGCTACAGACAGTGGAGCAACTTACACAATTATAATCTTAGC
TGGCTAGCTTTCCTATATAGTGCAGTAACATACGAGTGCAGGATCACATCAAGAGATGAAACGCCTCAGGCTTATTAATT
CCCAGTTGCGTACTACTGCAGGAA-TGAATCAAGAGATGACATATATACATGAAG---GTGTCAAATAAGTGGATTACAT
CGAAGAGATAAA---------------------------AAAAAATCCTTCAAACTAGAAAGATCGATGTATGCCTGCTA
AATGTAAGCCAATTTTTATTCAGAACAAGGTTGCATGATTTATGCTCAGAGCTTTTGCGCAGGATGATCTATTAGGATTT
TTTTTCCAATTT-ATGGCAAAAGGAGATCACAATTTTGGAAGGGTTTACATGCTATGATAATCTTGTTTACGATGGGAGC
TGCATATACTGTACG--------CAAGTTGCCCCATGAGGAATTTTAGCTAGGTGTCTCTAGTCAGTTCTCAACATAAGC
ACTGT---ATATAGCTA---TCTTATTTGGAGTTTCAGAGGCCTCTCAAGGTTGAAACATTCTGTATGGCTGCTTCCAGG
TGATAGGATACAGTCACCTGAGCTCTGAGGCCTGGAAGAT--TACTCTGTAAATTATGTAGAGATGTTGAATCATCAGAA
GAATAGAAAATGTTTTAGTTGCCTTTT-GGTCAAATTTCATTGGTGTGTGTATAGAGATTGAAAAGTCCCGGAGCCTTAT
GGATGCTTTAGATAGATGAG----------------------------AAATGTTGAATCGACCTCAATTTTATGCACGA
GGGCTGCAAGCCTGCAGAATGATATATTTTATTTTCAAGTATAATTGTGAATCTCTAA-GATGATCACCCCAAGTGCAAC
CGCAACATTTTATC-ATAGCAATTTGAAGTCACTTCCATAATGTGCATTTATCTTGGAAAAATAATGGGCATACACTCGA
AGAATTGTACTA-----TTAGTATCAAAATGGGGCGT-------------------------------------------
-----------
>chr4A_611
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------------------------------------------TAACTTTAGCATCACACTAGACGGTCATTCAAGATCCG
ATACACCAATTCATCAGAAGGGGATGATTCTAGGGTTCTAGGAGGAAGAAGGAGATCTTATCAAAAAGGAG--GAAGAAG
GAGAGAGGCACACGCAGGTGCAGAGAGAAAGAGAGAAGAGAAAAGAGATATCTGTTCTTGGTCGCCTCCTTG--------
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-----------------------------------AGAGCTGCCCCCCTCATCAAA---GCTGCTGACCGTTGCGTACAT
GGGCC----------------------------GGCCTTTGAGTGTGTGCCTAGTCCTTCCTGACGGGCCTCCA------
-------------GCACCGGTTGGTGGTGGGCCCTGCTTGTC--------------------------------------
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-----------------GGTGGCAGACTTGGTCGTGACACTCCACTTGTCTAGAGGTGGGGGTGCCGGCGCCGG------
--------------------------------CGCCCTGGCCCCGCCATCTCACCTCGGGAGAAGTTACCAGAAAATAAT
GAGATGGAGGAGGAGCACAGCGGCGGGGTGCGGCGGAGGTGGCTCGTCGACGTCGCCCGCTGGCGCCCCTCCCCGACGCA
GTTCCAAGCCGCGGCTGCCCTCCTGCCGCCGCACCACCGCCATGCCATCGCCAGGTAAACTCTCCCTCCAATTCAACTCC
CCCCCATGCTTCCTTGCCCTCTTAACTATGCCCTTCGGAGATGGATAAGAAAAAAACCCATGGAATTGGTAGGGTTGAAT
TCGAATCAAAACCCCTGACTATGCCCTTCGGAGATTGATCTTGCTGTGGGATTCAACCCAACTCGCTGGTGCAGGTTTGT
CAAGGAGGAGGACAGGAAACGAGCGCTCATCAGCCGGCTGCTCCAGTACTCGCTTGTGCACCGTGTTCTTGGCATCCCAT
TCCACCAAATCGACATATGCCGAACAACTGAAGGGAAGCCGTATCTGGTACTGCAGCTTGTTCAATCAATTTCATTCCGA
CGTCACTACAACAACTCTTTACCCTTTACTTACTCTCAACTACATCAACGGATGAAATGAGCATTTGTTAGGTCCAATAG
CTTCTGCAATCAATGGATCACCCTCTTATTAAGTTATATGCCCTTGTCATTCTTGCAGGAGAATGGCCCTCCGGCCTTCA
GAAACTTCAATTTCAACACGTCGCATCAGGGTGACTACGTCGGCATAGCATCTGAGCTGCTTTGCCTTGTTGGCCTTGAT
ATTGTGTGTATCTCTAAGCCTCAGGGAGAAACCACCGTAGAATTCCTTAAGAACTTCTCTTCGTACCTCACAGACCATGA
GTGGAACTGCATTGATCGTGCTGCCGGTTCCATTGAGATGTTAACAGAGTTCTACAGGTAATTATTTGTTGGGAGCTTTC
TGA-------------------------------------TAGACAATAATGTACAGAGAATCAGCATCCAGAGTTGTGG
TTGAGTGTCGGGCCCTCTACCCTGATGGATAATTCAGAAGACTATGAGCTAGTTCTAGAATCACCACGAAAAAAGCACAA
TAAAAGAGTAGTAGATCAATGCTACTACTTATGAATTTCTGCTGAAACCTAACCAA-GTACCTGTACTCCCATGTCCTAA
AAGTTATCATTGCTGCACTCAAGTTCATAGATGCTGCAGTGTTTAACAACCCATTCAGCTGCGTGAGGCTTGAGTCCTAA
TTTTTAATATTTTAGCAAAAACAAATCTCTGGGTTTTGCCAACAATGTGGAAGGAGATTTTTTTTACTAAAATAAATAGT
TTTAAGATTTTGAAATAAGTACGCTTCAAACACTACCAAGGATGTGGT---TCTGCTTTTGTAAGAAGTGTATGTTAGCA
GCTATGTTAGTTGATATCATCTCCATGC-TTTGATGGTCTGCATAGTATAAATTGTTTGTC---TTTC-TTTTGGAAGAA
AGACAGCCAAAGTG-CATCTTAGATTTGATAATTATCAAAGAAAACAACCAGTACATTACATTGAAAAACATACTAGCCT
TCTTCTTCCTCCGATTGACTGCCGCCCGTTGGAGATTG--------AAATCGCACTGAACCAACGGTAAAGAAAAGGGAC
ACCTGCAAATGCCCTCGCCATACCAGGCTTTAAATTGTTCGTCTTTTGTAGGTACTGGTGTCTCAAAGAAGCATTTGTTA
AAGCTGTAGGCGCTGGGGTTGGATTTGGGCTGCATCGCTTGGAATTCCACCATGTTGAATGGAGTAACATCTCTGTCTAC
ATTGACGGGATAGAGTCTAGGAAATGGAGGTTCTGCCTTTTCAAGCTTGATGAAATGCATTTGGTATGTATGGATTTGTT
CACATCATATTCTTTGCACAGATAGAAATCCAATTCAAAATCGATCTGGTGATATAAATCTGTTATATGTTCTTTACAAA
GCGTGGAGTAGGGATATGCTCTTGCAGGTTAGTTCTTGTGACAGGTTAC----TTACCATTACAAATGCAATTGCAGGCG
TCCATAGCGAAAGGGCATCCGGAGGATGCTACACACAGCTTCAAGACAACATTGTCTGATGTGGTTGTTGAGGACGAAGA
ATTTTATGCTGCACTAGAGATACCAGATGAAACTTTCACGCTACAGACAGCGGAGCAACTTACACAATTATAGTCTTAGC
TGGCTAGATTTCTTACATAGTGCAGTAACATATGAGTGCAGGATTATATCAAGAGATGAAACGCCTTAGGCTTATTGATT
CCCAGTTGCATACCACTTCACGAA-TGAATCAAGAGATGACATATATACTTGAAG---GTGTCAAATAAGTAGATAATCA
AGAGATGACATATACATGAAGAAGGTGTCAGGATTTGATAAAAAAAACTTGAAACTAGAAAGATAGATGAATGCCTGCTA
AATGTAGGCCAATTTTTATTCAGAACAAGGATGCATGATTTATGCTCAGAGCTTTTGCGCAGGATGATCTATCAGGATTT
TTTTTCCAATTT-ATGGCAAAAGGAAATCACAATTTTGGAAGGGTTTACATGCTATAATAATCTGGTTTACGATGAGAGC
TGCATATATTGTAGATTTGTAGTCAAGTTGTCTCATGCGAAATTTTGGCCAGGTGTCTCTAGTCATTTCTCAACATAATC
ACTGTGTAATACAGCCA---TCTTATTTGGAGCTTCAGAGGCCTCTCAAGGTTGAAACATTCTGTATGGCTGCTTCCAGG
TGATAG--------------AGATCTGAGGCGTGGAGGAT--TACTCTGTAAACCATGTAGAGATCTTGAATCGTCAGAA
CAGATGC---TGTTTTAGTTGCCTTTTTGGTAAATTTTCATTGGTGTGTGCATAGAGATTGAAGAGTCCTGGAACCTTAT
GGATGCTGTAGGTAACACAGATGAC-----------------------AAATGTTGAATCGACTTCAATTCTATGCATGA
GGGCTGCAAGCCTGCAGAACGATATATTTTATTTTGAAGTATAATTTGTAAACCTTTAGGATGATCACCCCAAGTGCAAC
CGCAACATTTTAAAAATAGCAATCTGAACTCACTTCCATAATGTGCCTTTATCTTGG-AAAATAATGGACATACACTCGA
AGAGTTGTA-----------------------------------------------------------------------
-----------
>SNPs
-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
---S-------S--------------------------------S---S-----------------------S-------
-------------S--SSSS--S---------------------------------------------------------
--------------------------------S-------S---------------------------------S-----
-----------------------------------S-----------------------------------SS-------
---------------------------------------S---------SS-----------------------------
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-------------------------------------------------------------------------------S
SSSSSSS-------------------------------------------------------------------------
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--------------------S-------------S-S-SSSSS-------------------------------------
--------------SSSSSSSSSSSSSSSSSS---------------------------S--------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S------S---------
---------------------------------------------------------S----------------------
-------------------------------S-------------------------------------S-------S--
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----------S-------------------S-SSS----S---------S------------------------S-----
--------------------S--------------------------S----------S-----S---------------
-------S-----------S--------------------S---------------------------------------
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>forward_20
CTCGGAGGGCACTGTTATCC------------------------------------------------------------
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----------------------------------------AGGCATAGCATCAGAGCTGC--------------------
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------------------------------------------------------------TAGCTGACCGTTGCGTACAG
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----------------------------CCAGCCACCGGAGATTGAAA--------------------------------
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-----------------------------------------------AACCCATTCAGCTGCATGGA-------------
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----------------------------------GTCACGCTACAGACAGTGGA--------------------------
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---------------------------------------------------------------------------GAGAC
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>reverse_5550
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-----------------------------TGGTTTCAGAGGCCTGTCAA-------------------------------
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-----------
